mRNA_F-serratus_M_contig152.3575.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig152.3575.1 vs. uniprot
Match: D7FS55_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS55_ECTSI) HSP 1 Score: 296 bits (757), Expect = 1.930e-90 Identity = 159/286 (55.59%), Postives = 198/286 (69.23%), Query Frame = 1
Query: 292 LSFLTDL---QPIPRVIVIALIAAAGGTGIYFLVITGAILDWPLPFY-PWQILTLVFWAISKSAIASGGRLDGGAIGAEVPSGNKDQSSSSESVHYFMPAGWAFAIWAPILLGETALAIYQALPTHGVAKAAEWLAALSPWLSAAFLLQALWCLSFRKWAKDAGLLWFPTLLLIGTALCLDRAHHVLRVAEALGAVSLLQYFLVHLPVSLHFAWITCAVLVNLNKYIGGISRFSSTVKFGFSMASIVVAVLLAVGITGKTGDPVYAAVVAWALLAVAGKGGAENME 1137
+SFL + +P+ R + + +A AG G+YF +GA++ W LP+ PWQ+LTL WAI+ +A+++GGRLDG P + + V YFMPAGWAF+IW PI LGE ALA+YQ LP GV+ AA WL+ LSPWLS+AFL+Q+ WCLSFR+WA+D+GLLWFP LL GTA CL AHHV+R A A G +S LQY LVHLPVSLHF W++CA LVN N YI + FS K FS+ASI AV LAV +TG TGDPVYA VVAWAL AVA + G M+
Sbjct: 1 MSFLQGIIPEKPVQRAVSVTALAIAGCGGLYFAAESGALVSWSLPYVKPWQVLTLTSWAINTAAVSAGGRLDG-------PEPEDPKDAKLPLVRYFMPAGWAFSIWGPIFLGEAALAVYQTLPLEGVSAAAGWLSKLSPWLSSAFLVQSCWCLSFREWARDSGLLWFPAALLGGTAACLGGAHHVVRGALAAGEMSNLQYGLVHLPVSLHFGWVSCATLVNFNNYIS-LLPFSDKGKLNFSLASIASAVGLAVAVTGTTGDPVYAGVVAWALSAVASEKGWAKMK 278
BLAST of mRNA_F-serratus_M_contig152.3575.1 vs. uniprot
Match: D8LCC2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCC2_ECTSI) HSP 1 Score: 218 bits (556), Expect = 4.690e-58 Identity = 131/322 (40.68%), Postives = 177/322 (54.97%), Query Frame = 1
Query: 325 RVIVIALIAAAGGTGIYFLVITGAI-LDWPLPFY-PWQILTLVFWAISKSAIASGGRLDGGAIGAEVPSGNKDQSSSSESVHYFMPAGWAFAIWAPILLGETALAIYQALPTHGVAKAAEWLAALSPWLSAAFLLQALWCLSFRKWAKDAGLLWFPTLLLIGTALCLDRAHHVLRVAEALGAVSLLQYFLVHLPVSLHFAWITCAVLVNLNKYIGGISRFSSTVKFGFSMASIVVAVLLAVGITGKTGDPVYAAVVAWALLAVAGKGGAENMERPGVQDMVANEDASTDTPLMTSGGGVESSKLKTENLVARIGSGLCVVAA 1284
R ++I +IAA G G++ L + WP+ PWQ+L WA++ A GGRLDG IG + SS + V + PAGWAFAIW PI GE +Q +P + + + WL+ +SPW + A L QALWC SFR WA+D+GLLW P LLL GT + L H +LR A +++LQY VH+P+SLH WI+CA LVNLN Y I++ S+ VK G ++ S+V AV L V IT DP+YAAVVAWAL AV G + + G VE ++T+ VA+ G+ + AA
Sbjct: 274 RSLLIIVIAALGSGGLHALTTNNLLRAAWPITLVDPWQVLAASAWALNMRATFGGGRLDG--IG-------QSGSSGTRPVRFLSPAGWAFAIWGPIFFGEAIYVAFQLMPLPSI-RGSWWLSDISPWFAGAMLFQALWCFSFRPWARDSGLLWLPALLLGGTGVALGGVHRILREAWFTSDMTVLQYLAVHVPLSLHLGWISCATLVNLNGYFATINKLSNRVKLGLALGSVVAAVALGVAITLLREDPIYAAVVAWALWAVGSPAGWDELR-----------------------GRVEPGLIRTQQGVAKAGAVITASAA 562
BLAST of mRNA_F-serratus_M_contig152.3575.1 vs. uniprot
Match: A0A7S2UXB1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXB1_9STRA) HSP 1 Score: 175 bits (444), Expect = 2.540e-45 Identity = 116/305 (38.03%), Postives = 160/305 (52.46%), Query Frame = 1
Query: 385 ITGAILDWPLPFYPWQILTLVFWAISKSAIASGGRLDGGAIGAEVPSGNKDQSSSSESVHYFMPAGWAFAIWAPILLGETALAIYQALPTHGVAKAAEWLAALSPWLSAAFLLQALWCLSFRKWAKDAGLLWFPTLLLIGTALCLDRAHHVLRVAEALGAVSLLQYFLVHLPVSLHFAWITCAVLVNLNKYIGGISRFSSTVKFGFSMASIVVAVLLAVGITGKTGDPVYAAVVAWALLAVAGKGGAENMERPGVQDMVANEDASTDTPLMTSGGGVESSKLKTENLVARIGSGLCVVAAVLFFF 1299
I A + W LPF PWQIL ++ WA++ A++ GRLDG A S + +F PAGWAFAIW PI LGE A +Q LP V ++ L+ W A Q+LWC +FR WAK +G LW P LL TA+ L AH VL A VS+L+Y +V++P++LHF WIT A LV+ N Y+ ++ S ++K S ASIV V+ A + +P Y VV+WAL AVA K G +E G V LK + +A +GSG+ ++ A++ F+
Sbjct: 45 IVNASISW-LPFRPWQILNILAWALNMWAVSVPGRLDGSQAAA---------LSDEGEIRFFTPAGWAFAIWGPIFLGEALFAFFQLLPIETVQT--SFIPKLTVWWIPAVACQSLWCSAFRPWAKKSGFLWLPAALLTLTAVALGGAHKVLFDALHSEEVSMLEYIIVNIPLTLHFGWITAASLVSWNGYLASVTA-SISIKSLASSASIVAGVIAAALVGWNRIEPFYPLVVSWALAAVADKKGWSQLE-----------------------GKVPGPILKRLSGLASLGSGISLLLAIVAFW 313
BLAST of mRNA_F-serratus_M_contig152.3575.1 vs. uniprot
Match: A0A835Z9R9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9R9_9STRA) HSP 1 Score: 173 bits (439), Expect = 9.640e-45 Identity = 103/231 (44.59%), Postives = 134/231 (58.01%), Query Frame = 1
Query: 424 PWQILTLVFWAISKSAIASGGRLDGGAIGAEVPSGNKDQSSSSESVHYFMPAGWAFAIWAPILLGETALAIYQALPTHGVAKAAEWLAALSPWLSAAFLLQALWCLSFRKWAKDAGL--LWFPTLLLIGTALCLDRAHHVLRVAEALGAVSLLQYFLVHLPVSLHFAWITCAVLVNLNKYIGGISRFSSTVKFGFSMASIVVAVLLAVGITGKTGDPVYAAVVAWALLAVA 1110
PWQ+L V + ++ +A+ GRLDG + ++ YF PAGWAFAIWAPI GE IYQALP V + + WLA LSP+ S A LLQ LWC +FR WA+ AGL W P LLL A L AH +L A +S L Y L +P++LHF W+T A LVN N ++ + S VK ++ASI +AVL+ +T DP+YAAV+AWAL A+A
Sbjct: 37 PWQVLNAVTYLLNFAAVRVPGRLDG----------RQWSQDAATQQRYFAPAGWAFAIWAPIFAGELLFVIYQALPLARV-RTSWWLAELSPYFSGAMLLQTLWCGAFRPWARAAGLNLQWIPALLLGLGAAALGGAHGILVQALEDSELSPLSYALAFVPLALHFGWLTAAALVNANGFVAAAAPRSHAVKASAAIASIYLAVLVGAAVTFARRDPIYAAVIAWALAAIA 256
BLAST of mRNA_F-serratus_M_contig152.3575.1 vs. uniprot
Match: A0A4D9D883_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D883_9STRA) HSP 1 Score: 161 bits (408), Expect = 1.570e-39 Identity = 103/227 (45.37%), Postives = 131/227 (57.71%), Query Frame = 1
Query: 430 QILTLVFWAISKSAIASGGRLDGGAIGAEVPSGNKDQSSSSESVHYFMPAGWAFAIWAPILLGETALAIYQALPTHGVAKAAEWLAALSPWLSAAFLLQALWCLSFRKWAKDAGLLWFPTLLLIGTALCLDRAHHVLRVAEALGAVSLLQYFLVHLPVSLHFAWITCAVLVNLNKYIGGISRFSSTVKFGFSMASIVVAVLLAVGITGKTGDPVYAAVVAWALLAVA 1110
Q+L L+ W +K A+ GR DG + KD SS V +F P+ +AFAIWAPI LGE L YQ + +LA L+P L+ AF Q+LWC++FR W + + P+ LL TA+ L R H VLR A A GA+ Y +VHLP+SLHF WITCA LVNLN + + K G ++ASI VAV L +T +GDPV A VVAWAL AVA
Sbjct: 117 QVLILLAWLTNKIAVRIPGRSDGKSW--------KDAMSSP--VRFFTPSAYAFAIWAPIFLGEFLLTFYQLASSRLAPALQPYLARLAPPLAQAFAAQSLWCVAFRPWV--GRMQFVPSALLAMTAVGLSRVHTVLREAVAAGAMRPWDYLIVHLPLSLHFGWITCATLVNLNGWFAVAPTLRTGDKLGLALASINVAVTLGSQVTLASGDPVIALVVAWALYAVA 331
BLAST of mRNA_F-serratus_M_contig152.3575.1 vs. uniprot
Match: F0YJX7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJX7_AURAN) HSP 1 Score: 140 bits (353), Expect = 3.850e-32 Identity = 96/238 (40.34%), Postives = 118/238 (49.58%), Query Frame = 1
Query: 424 PWQILTLVFWAISKSAIASGGRLDGGAIGAEVPSGNKDQSSSSESVHYFMPAGWAFAIWAPILLGE--TALAIYQALPTHGVAKAAEWLAALSPWLSAAFLLQALWCLSFRKWAKDAGLLWFPTLLLIGTALCLDRAHHVLRVAEALGAV---SLLQYFLVHLPVSLHFAWITCAVLVNLNKYIGGISRFSSTVKFGFSMASIVVAVLLAVGITGKTGDPVYAAVVAWALLAVAGKGG 1122
PWQ W ++ A+ GR DGG GA + + + PAGWAFAIW PI LGE T L + A P H V +AA PW A L Q WC FR G LW P+ L TA L +AH L+ + A L LV P+SLHFAW+TCA LVN+NKY+ + VK ++ S+ VA A + TGDP+Y VVAWAL AVA GG
Sbjct: 136 PWQAAVAACWTLNNVAVMVPGRYDGGGDGAPT----------AATANLLAPAGWAFAIWGPIFLGECVTMLLVTAADPGHPVFDVGAAIAA--PWC-AGTLCQVAWCGLFRPSVCGPGALWIPSAALAATAFFLGKAHAALQGLDLYAAGPLRGLRNDLLVRWPLSLHFAWVTCATLVNINKYLA-LRGADLRVKEAGALGSVAVAAAAAAYVLRTTGDPLYGFVVAWALAAVAADGG 359
BLAST of mRNA_F-serratus_M_contig152.3575.1 vs. uniprot
Match: A0A090N4T8_OSTTA (Unnamed product n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090N4T8_OSTTA) HSP 1 Score: 134 bits (337), Expect = 5.420e-31 Identity = 87/245 (35.51%), Postives = 128/245 (52.24%), Query Frame = 1
Query: 424 PWQILTLVFWAISKSAIASGGRLDGGAI--GAEVPSGNKDQSS-----SSESVHYFMPAGWAFAIWAPILLGETALAIYQALPTHGVAKAAEWLAALSPWLSAAFLLQALWCLSFRKWAKDAGLLWFPTLLLIGTALCLDRAHHVLRVAEALGAVSLLQYFLVHLPVSLHFAWITCAVLVNLNKYIGGISRFSSTVKFGFSMASIVVAVLLAVGITGKTGDPVYAAVVAWALLAVAGKGGAENME 1137
PW+++ + + ++ +++++ GR+DG AE ++ + SE F PAGWAFAIW I GE A+ H + E +AA +P+ + A LQ+LWC++FR WAK W + LLI A L A LR A ++ L ++ +P+SLHF WI+CA LVN+N ++ + + F F S A L G++ +GD VY AVVAWAL AVA GG E
Sbjct: 44 PWKVVVALAYGVNVASVSAPGRIDGEMQKRAAEAKRAKPEEKAHGVPLDSEFRSLFTPAGWAFAIWGVIYAGE------MAMTAHALLGGDERVAAAAPYWAVACGLQSLWCVAFRPWAKKPRHFWVSSALLITEAFALGGATRALRGAGSISPSEAL-FWTTRVPLSLHFGWISCAALVNVNSHVAKTCAIDTQIAFAF--LSAFGASALGAGVSVFSGDAVYGAVVAWALAAVASDGGKRTTE 279
BLAST of mRNA_F-serratus_M_contig152.3575.1 vs. uniprot
Match: A4S135_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S135_OSTLU) HSP 1 Score: 130 bits (328), Expect = 2.270e-30 Identity = 80/196 (40.82%), Postives = 102/196 (52.04%), Query Frame = 1
Query: 550 SESVHYFMPAGWAFAIWAPILLGETALAIYQALPTHGVAKAAEWLAALSPWLSAAFLLQALWCLSFRKWAKDAGLLWFPTLLLIGTALCLDRAHHVLRVAEALGAVSLLQYFLVHLPVSLHFAWITCAVLVNLNKYIGGISRFSSTVKFGFSMASIVVAVLLAVGITGKTGDPVYAAVVAWALLAVAGKGGAENME 1137
SE F PAGWAFAIW I GE AL + G + A++P + A QALWC +FR WAK W + LL+ A+ L AH LR A + A S Y+ H+P+S+HF WI+CA LVNLN ++ + + + S A L +T TGDPVYA V+AWAL AVA GG E
Sbjct: 30 SEYRSLFTPAGWAFAIWGAIYAGEFALVAHALASASGGGASEAATRAVAPSWALACAFQALWCAAFRPWAKAPRHFWVSSALLVAEAVALGSAHRALRAAAS--AASKAWYWTTHVPLSMHFGWISCAALVNLNSHVA--KTCAPDTQLATAFLSAFGAGGLGAAVTLTTGDPVYALVIAWALTAVASDGGKRTTE 221
BLAST of mRNA_F-serratus_M_contig152.3575.1 vs. uniprot
Match: A0A7R9XV25_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9XV25_MICPS) HSP 1 Score: 132 bits (333), Expect = 3.390e-30 Identity = 86/249 (34.54%), Postives = 127/249 (51.00%), Query Frame = 1
Query: 427 WQILTLVFWAISKSAIASGGRLDGGAI-----GAEVPSGNKDQSSSSESV-------HYFMPAGWAFAIWAPILLGETALAIYQALPTHGVAKAAEWLAALSPWLSAAFLLQALWCLSFRKWAKDAGLLWFPTLLLIGTALCLDRAHHVLRVAEALGAVSLLQYFLVHLPVSLHFAWITCAVLVNLNKYIGGISRFSSTVKFGFSMASIVVAVLLAVGITGKTGDPVYAAVVAWALLAVAGKGGAENME 1137
WQ+ + +A++ +++ GGR+DG A+ K ++ ++ V F PAGWAFAIW I LGE+ QA P+ + + E AAL+PW + + LQALWC++FR WA+ W LL A+ L R A ++S ++ LP+ LHF WIT A +VNLN + ++ + + + AS+ A L V + TGD V+AA +AWAL AVA GG E
Sbjct: 57 WQLANVASFAVNVVSVSVGGRVDGEMAKEAKRAAKAKREGKSEAEAAAGVPRDSIYRSLFTPAGWAFAIWGVIYLGESVFVAAQASPSLA-SSSRELYAALAPWWTISCGLQALWCVAFRPWARRPRHFWISGALLATEAVALGRVARCFVGASPSRSLSTTEFLAARLPLGLHFGWITAAAVVNLNSLVA-VAGAAPHAQLSIAFASVWGAAALGVAVALGTGDAVFAATLAWALAAVASDGGTRTRE 303
BLAST of mRNA_F-serratus_M_contig152.3575.1 vs. uniprot
Match: A0A1Y5IB82_OSTTA (Uncharacterized protein n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IB82_OSTTA) HSP 1 Score: 134 bits (337), Expect = 2.650e-28 Identity = 87/245 (35.51%), Postives = 128/245 (52.24%), Query Frame = 1
Query: 424 PWQILTLVFWAISKSAIASGGRLDGGAI--GAEVPSGNKDQSS-----SSESVHYFMPAGWAFAIWAPILLGETALAIYQALPTHGVAKAAEWLAALSPWLSAAFLLQALWCLSFRKWAKDAGLLWFPTLLLIGTALCLDRAHHVLRVAEALGAVSLLQYFLVHLPVSLHFAWITCAVLVNLNKYIGGISRFSSTVKFGFSMASIVVAVLLAVGITGKTGDPVYAAVVAWALLAVAGKGGAENME 1137
PW+++ + + ++ +++++ GR+DG AE ++ + SE F PAGWAFAIW I GE A+ H + E +AA +P+ + A LQ+LWC++FR WAK W + LLI A L A LR A ++ L ++ +P+SLHF WI+CA LVN+N ++ + + F F S A L G++ +GD VY AVVAWAL AVA GG E
Sbjct: 341 PWKVVVALAYGVNVASVSAPGRIDGEMQKRAAEAKRAKPEEKAHGVPLDSEFRSLFTPAGWAFAIWGVIYAGE------MAMTAHALLGGDERVAAAAPYWAVACGLQSLWCVAFRPWAKKPRHFWVSSALLITEAFALGGATRALRGAGSISPSEAL-FWTTRVPLSLHFGWISCAALVNVNSHVAKTCAIDTQIAFAF--LSAFGASALGAGVSVFSGDAVYGAVVAWALAAVASDGGKRTTE 576 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig152.3575.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig152.3575.1 >prot_F-serratus_M_contig152.3575.1 ID=prot_F-serratus_M_contig152.3575.1|Name=mRNA_F-serratus_M_contig152.3575.1|organism=Fucus serratus male|type=polypeptide|length=339bp MLSFLTDLQPIPRVIVIALIAAAGGTGIYFLVITGAILDWPLPFYPWQILback to top mRNA from alignment at F-serratus_M_contig152:581712..594319- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig152.3575.1 ID=mRNA_F-serratus_M_contig152.3575.1|Name=mRNA_F-serratus_M_contig152.3575.1|organism=Fucus serratus male|type=mRNA|length=12608bp|location=Sequence derived from alignment at F-serratus_M_contig152:581712..594319- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig152:581712..594319- >mRNA_F-serratus_M_contig152.3575.1 ID=mRNA_F-serratus_M_contig152.3575.1|Name=mRNA_F-serratus_M_contig152.3575.1|organism=Fucus serratus male|type=CDS|length=2034bp|location=Sequence derived from alignment at F-serratus_M_contig152:581712..594319- (Fucus serratus male)back to top |