mRNA_F-serratus_M_contig152.3563.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig152.3563.1
Unique NamemRNA_F-serratus_M_contig152.3563.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig152.3563.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE)

HSP 1 Score: 371 bits (952), Expect = 6.790e-120
Identity = 178/305 (58.36%), Postives = 218/305 (71.48%), Query Frame = 1 
Query:    1 WHRRLGHMNPRNMEVLRNKKGNGVEYTGIISGCDICSVTKSKQQAHPKKSMRKTTRPMKLVYTDLMGPFTPAAK---GGYRLVSKFTDDYLRMKEIFLLKNKIEAAESLHQYNMTVAAPLGLRIENLRCDKGGEYTGQECRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLMKDGDVPPFMWGELLFTATYLANRSAHSTLEGATPYSKMHNLEPDLTGLRAIGARAFVHRETYTKKLEDRAFEGKLCRYSHNSKAYRI*NPAKGTVVESRNVTFLETPAYTLPPDVTTEDYHYEED 906
            WHRRLGH+N R++++LR   G GV+Y   +S C +C + K KQ  HPK+S R+ +RP +LV  D MGP  P AK   G +    K TDDY +MKE++LL+ K +  E++H YNM VAA  G RIE +RCDKGGE TG E R  C  + I +EY ATNTPQQ GVSERDG TLA +TRCL+KDGD PP MWGEL+ TA YL NRS HS L GATPYSK+HN  PDL+GLR IGARAFVH E Y KKL+DRAFEGKLC +  +S+ YR+ NP+ G VVESRNVTF+E+P  ++P   +TE   YE D
Sbjct:   45 WHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIESPPRSVPFQYSTEANGYESD 349
[Close]
BLAST of mRNA_F-serratus_M_contig152.3563.1 vs. uniprot
Match: A0A6H5KCM0_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM0_9PHAE)

HSP 1 Score: 364 bits (934), Expect = 7.490e-120
Identity = 176/305 (57.70%), Postives = 216/305 (70.82%), Query Frame = 1 
Query:    1 WHRRLGHMNPRNMEVLRNKKGNGVEYTGIISGCDICSVTKSKQQAHPKKSMRKTTRPMKLVYTDLMGPFTPAAK---GGYRLVSKFTDDYLRMKEIFLLKNKIEAAESLHQYNMTVAAPLGLRIENLRCDKGGEYTGQECRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLMKDGDVPPFMWGELLFTATYLANRSAHSTLEGATPYSKMHNLEPDLTGLRAIGARAFVHRETYTKKLEDRAFEGKLCRYSHNSKAYRI*NPAKGTVVESRNVTFLETPAYTLPPDVTTEDYHYEED 906
            WHRRLGH+N R++++LR   G GV+Y   +S C +C + K KQ  HPK+S R+ +RP +LV  D MGP  P AK   G +    K TDDY +MKE++LL+ K +  E++H YNM VAA  G RIE +RCDKGGE TG E R  C  + I +EY ATNTPQQ GVSERDG TLA +TRCL+KDGD PP MWGEL+ TA YL NRS HS L GATPYSK+HN  PDL+GLR IGARAFVH E   KKL+DRAFEGKLC +  +S+ YR+ NP+ G  VESRNVTF+E+P  ++P   +TE   YE D
Sbjct:   45 WHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDNCKNSAIKLEYAATNTPQQLGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERCRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAGVESRNVTFIESPPRSVPFQYSTEANGYESD 349
[Close]
BLAST of mRNA_F-serratus_M_contig152.3563.1 vs. uniprot
Match: A0A6H5K1R7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1R7_9PHAE)

HSP 1 Score: 368 bits (945), Expect = 3.320e-118
Identity = 177/305 (58.03%), Postives = 217/305 (71.15%), Query Frame = 1 
Query:    1 WHRRLGHMNPRNMEVLRNKKGNGVEYTGIISGCDICSVTKSKQQAHPKKSMRKTTRPMKLVYTDLMGPFTPAAK---GGYRLVSKFTDDYLRMKEIFLLKNKIEAAESLHQYNMTVAAPLGLRIENLRCDKGGEYTGQECRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLMKDGDVPPFMWGELLFTATYLANRSAHSTLEGATPYSKMHNLEPDLTGLRAIGARAFVHRETYTKKLEDRAFEGKLCRYSHNSKAYRI*NPAKGTVVESRNVTFLETPAYTLPPDVTTEDYHYEED 906
            WHRRLGH+N R++++LR   G GV+Y   +S C +C + K KQ  HPK+S R+ +RP +LV  D MGP  P AK   G +    K TDDY +MKE++LL+ K +  E++H YNM VAA  G RIE +RCDKGGE TG E R  C  + I +EY ATNTPQQ G SERDG TLA +TRCL+KDGD PP MWGEL+ TA YL NRS HS L GATPYSK+HN  PDL+GLR IGARAFVH E Y KKL+DRAFEGKLC +  +S+ YR+ NP+ G VVESRNVTF+E+P  ++P   +TE   YE D
Sbjct:   45 WHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGGSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIESPPRSVPFQYSTEANGYESD 349
[Close]
BLAST of mRNA_F-serratus_M_contig152.3563.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 371 bits (952), Expect = 4.280e-117
Identity = 178/305 (58.36%), Postives = 218/305 (71.48%), Query Frame = 1 
Query:    1 WHRRLGHMNPRNMEVLRNKKGNGVEYTGIISGCDICSVTKSKQQAHPKKSMRKTTRPMKLVYTDLMGPFTPAAK---GGYRLVSKFTDDYLRMKEIFLLKNKIEAAESLHQYNMTVAAPLGLRIENLRCDKGGEYTGQECRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLMKDGDVPPFMWGELLFTATYLANRSAHSTLEGATPYSKMHNLEPDLTGLRAIGARAFVHRETYTKKLEDRAFEGKLCRYSHNSKAYRI*NPAKGTVVESRNVTFLETPAYTLPPDVTTEDYHYEED 906
            WHRRLGH+N R++++LR   G GV+Y   +S C +C + K KQ  HPK+S R+ +RP +LV  D MGP  P AK   G +    K TDDY +MKE++LL+ K +  E++H YNM VAA  G RIE +RCDKGGE TG E R  C  + I +EY ATNTPQQ GVSERDG TLA +TRCL+KDGD PP MWGEL+ TA YL NRS HS L GATPYSK+HN  PDL+GLR IGARAFVH E Y KKL+DRAFEGKLC +  +S+ YR+ NP+ G VVESRNVTF+E+P  ++P   +TE   YE D
Sbjct:   45 WHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIESPPRSVPFQYSTEANGYESD 349
[Close]
BLAST of mRNA_F-serratus_M_contig152.3563.1 vs. uniprot
Match: A0A6H5JSL6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL6_9PHAE)

HSP 1 Score: 368 bits (944), Expect = 5.790e-117
Identity = 178/305 (58.36%), Postives = 217/305 (71.15%), Query Frame = 1 
Query:    1 WHRRLGHMNPRNMEVLRNKKGNGVEYTGIISGCDICSVTKSKQQAHPKKSMRKTTRPMKLVYTDLMGPFTPAAK---GGYRLVSKFTDDYLRMKEIFLLKNKIEAAESLHQYNMTVAAPLGLRIENLRCDKGGEYTGQECRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLMKDGDVPPFMWGELLFTATYLANRSAHSTLEGATPYSKMHNLEPDLTGLRAIGARAFVHRETYTKKLEDRAFEGKLCRYSHNSKAYRI*NPAKGTVVESRNVTFLETPAYTLPPDVTTEDYHYEED 906
            WHRRLGH+N R++++LR   G GV+Y   +S C +C + K KQ  HPK+S R+ +R  +LV  D MGP  P AK   G +    K TDDY +MKE++LL+ K +  E++H YNM VAA  G RIE +RCDKGGE TG E R  C  + I +EY ATNTPQQ GVSERDG TLA +TRCL+KDGD PP MWGEL+ TA YL NRS HS L GATPYSK+HN  PDL GLR IGARAFVH E Y KKL+DRAFEGKLC +  +S+ YR+ NP+ G VVESRNVTF+E+PA ++P   +TE   YE D
Sbjct:  241 WHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRSGQLVVIDNMGPANPPAKYQGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIEAIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLLGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIESPARSVPFQYSTEANGYESD 545
[Close]
BLAST of mRNA_F-serratus_M_contig152.3563.1 vs. uniprot
Match: A0A6H5KCT3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT3_9PHAE)

HSP 1 Score: 371 bits (952), Expect = 1.460e-116
Identity = 178/305 (58.36%), Postives = 218/305 (71.48%), Query Frame = 1 
Query:    1 WHRRLGHMNPRNMEVLRNKKGNGVEYTGIISGCDICSVTKSKQQAHPKKSMRKTTRPMKLVYTDLMGPFTPAAK---GGYRLVSKFTDDYLRMKEIFLLKNKIEAAESLHQYNMTVAAPLGLRIENLRCDKGGEYTGQECRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLMKDGDVPPFMWGELLFTATYLANRSAHSTLEGATPYSKMHNLEPDLTGLRAIGARAFVHRETYTKKLEDRAFEGKLCRYSHNSKAYRI*NPAKGTVVESRNVTFLETPAYTLPPDVTTEDYHYEED 906
            WHRRLGH+N R++++LR   G GV+Y   +S C +C + K KQ  HPK+S R+ +RP +LV  D MGP  P AK   G +    K TDDY +MKE++LL+ K +  E++H YNM VAA  G RIE +RCDKGGE TG E R  C  + I +EY ATNTPQQ GVSERDG TLA +TRCL+KDGD PP MWGEL+ TA YL NRS HS L GATPYSK+HN  PDL+GLR IGARAFVH E Y KKL+DRAFEGKLC +  +S+ YR+ NP+ G VVESRNVTF+E+P  ++P   +TE   YE D
Sbjct:   45 WHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIESPPRSVPFQYSTEANGYESD 349
[Close]
BLAST of mRNA_F-serratus_M_contig152.3563.1 vs. uniprot
Match: A0A6H5J8P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8P7_9PHAE)

HSP 1 Score: 362 bits (928), Expect = 1.390e-113
Identity = 175/305 (57.38%), Postives = 214/305 (70.16%), Query Frame = 1 
Query:    1 WHRRLGHMNPRNMEVLRNKKGNGVEYTGIISGCDICSVTKSKQQAHPKKSMRKTTRPMKLVYTDLMGPFTPAAK---GGYRLVSKFTDDYLRMKEIFLLKNKIEAAESLHQYNMTVAAPLGLRIENLRCDKGGEYTGQECRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLMKDGDVPPFMWGELLFTATYLANRSAHSTLEGATPYSKMHNLEPDLTGLRAIGARAFVHRETYTKKLEDRAFEGKLCRYSHNSKAYRI*NPAKGTVVESRNVTFLETPAYTLPPDVTTEDYHYEED 906
            WHRRLGH+N R+++ LR   G GV+Y   +S C +C + K KQ  HPK+S R+ +RP +LV  D MGP  P AK   G +    K TDDY +MKE++LL+ K +  E++H YNM VAA  G RIE +RCDKGGE  G E R  C  + I +EY ATNTPQQ GVSERDG TLA +TRCL+KDGD PP MWGEL+ TA YL NRS+HS L GATPYSK+HN  PDL+GLR IGARAFVH E Y KKL+DRAFEGKLC +  +S+ Y + NP+   VVESRNVTF+E P  ++P   +TE   YE D
Sbjct:  386 WHRRLGHLNARSLDTLRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENAGSEFRNYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSSHSALGGATPYSKLHNQSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYWVLNPSNRAVVESRNVTFIEFPPRSVPFQYSTEANGYESD 690
[Close]
BLAST of mRNA_F-serratus_M_contig152.3563.1 vs. uniprot
Match: A0A6H5JRJ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ1_9PHAE)

HSP 1 Score: 361 bits (926), Expect = 1.670e-113
Identity = 173/305 (56.72%), Postives = 217/305 (71.15%), Query Frame = 1 
Query:    1 WHRRLGHMNPRNMEVLRNKKGNGVEYTGIISGCDICSVTKSKQQAHPKKSMRKTTRPMKLVYTDLMGPFTPAAK---GGYRLVSKFTDDYLRMKEIFLLKNKIEAAESLHQYNMTVAAPLGLRIENLRCDKGGEYTGQECRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLMKDGDVPPFMWGELLFTATYLANRSAHSTLEGATPYSKMHNLEPDLTGLRAIGARAFVHRETYTKKLEDRAFEGKLCRYSHNSKAYRI*NPAKGTVVESRNVTFLETPAYTLPPDVTTEDYHYEED 906
            WHRRLGH+N R++++LR   G GV++   +S C +C + K KQ  HPK+S R+ +RP +LV  D +GP  P AK   G +    K TDDY ++KE++LL+ K    E++H YN+ VAA  G RIE +RCDKGGE TG E R  C  + I +EY ATNTPQQ GVSERDG TLA +TRCL+KDGD PP MWGEL+ TA YL NRS HS L GATPYSK+HN  PDL+ LR IGARAFVH+E Y KKL+DRAFEGKLC +  +S+ YR+ NP+ G VVESRNVTF+E+P  ++P   +TE   YE D
Sbjct:   45 WHRRLGHLNARSLDILRKDTGTGVDFRDSLSPCGVCQIAKYKQSPHPKQSTRELSRPGQLVVIDNVGPVNPPAKYNGGSFPYACKITDDYTKVKEVYLLRKKSNTTEAVHTYNICVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSRLRVIGARAFVHQERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIESPPRSVPFQYSTEANGYESD 349
[Close]
BLAST of mRNA_F-serratus_M_contig152.3563.1 vs. uniprot
Match: A0A6H5JVS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS2_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 2.730e-108
Identity = 172/305 (56.39%), Postives = 209/305 (68.52%), Query Frame = 1 
Query:    1 WHRRLGHMNPRNMEVLRNKKGNGVEYTGIISGCDICSVTKSKQQAHPKKSMRKTTRPMKLVYTDLMGPFTPAAKGG---YRLVSKFTDDYLRMKEIFLLKNKIEAAESLHQYNMTVAAPLGLRIENLRCDKGGEYTGQECRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLMKDGDVPPFMWGELLFTATYLANRSAHSTLEGATPYSKMHNLEPDLTGLRAIGARAFVHRETYTKKLEDRAFEGKLCRYSHNSKAYRI*NPAKGTVVESRNVTFLETPAYTLPPDVTTEDYHYEED 906
            WHRRLGH NPR ME+LR      V+Y G +S CD C +TK K+   PKK+ R  T+P +LV  D MGP  P AK     Y  V+K TD + RM+E++LL+++ E  ++LH YNM VA+  G RIE LRCDKGGE TG+E R  C  + I +E+ ATNTPQ+ GVSERDG TLA +TR L++DGD P  MWGEL+ TA YL NR+ H+ L GATPYSKM+N  PDL+ LRAIGARAFVH E Y KKL DR FEGKLC Y  +SK YRI    K  V ESRNVTF+ETP  T+PP    +   YE+D
Sbjct:  354 WHRRLGHFNPRAMEILRRNPATSVKYEGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLGDRTFEGKLCGYGPDSKTYRIYVEGKDKVYESRNVTFIETPPNTIPPHRWDDRLGYEQD 657
[Close]
BLAST of mRNA_F-serratus_M_contig152.3563.1 vs. uniprot
Match: A0A6H5KBQ2_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBQ2_9PHAE)

HSP 1 Score: 342 bits (876), Expect = 3.520e-107
Identity = 174/305 (57.05%), Postives = 211/305 (69.18%), Query Frame = 1 
Query:    1 WHRRLGHMNPRNMEVLRNKKGNGVEYTGIISGCDICSVTKSKQQAHPKKSMRKTTRPMKLVYTDLMGPFTPAAKGG---YRLVSKFTDDYLRMKEIFLLKNKIEAAESLHQYNMTVAAPLGLRIENLRCDKGGEYTGQECRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLMKDGDVPPFMWGELLFTATYLANRSAHSTLEGATPYSKMHNLEPDLTGLRAIGARAFVHRETYTKKLEDRAFEGKLCRYSHNSKAYRI*NPAKGTVVESRNVTFLETPAYTLPPDVTTEDYHYEED 906
            WHRRLGH+NPR ME+LR     GV+Y G +S CD C +TK K+   PKK+ R  T+P +LV  D MGP  P AK     Y  V+K TD + RM+E++LL++K E  ++LH YNM VA+  G RIE LRC KGGE TG E R  C  + I +E+ ATNTPQ+ GVSERDG TLA +TR L++DGD P  MWGEL+ TA YL NR+ H+ L GATPYSKM+N  PDL+ LRAIGARAFVH E Y KKL+DRAFEGKLC Y  +SK YRI    K  V ESRNVTF+ETP  T+PP    +   YE+D
Sbjct:  209 WHRRLGHINPRAMEILRRNPATGVKYDGPVSPCDNCHITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDKTETTQALHAYNMQVASE-GYRIEVLRCKKGGENTGDEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKRMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRAFEGKLCAYGPDSKTYRIYVEGKDKVYESRNVTFIETPPNTIPPHRWDDRLGYEQD 512
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig152.3563.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K500_9PHAE6.790e-12058.36Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KCM0_9PHAE7.490e-12057.70Integrase catalytic domain-containing protein n=5 ... [more]
A0A6H5K1R7_9PHAE3.320e-11858.03Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JJR8_9PHAE4.280e-11758.36Integrase catalytic domain-containing protein n=11... [more]
A0A6H5JSL6_9PHAE5.790e-11758.36Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KCT3_9PHAE1.460e-11658.36Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5J8P7_9PHAE1.390e-11357.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRJ1_9PHAE1.670e-11356.72Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JVS2_9PHAE2.730e-10856.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBQ2_9PHAE3.520e-10757.05Integrase catalytic domain-containing protein (Fra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig152contigF-serratus_M_contig152:210019..210924 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score160.2
Seed ortholog evalue1.3e-36
Seed eggNOG ortholog4558.Sb07g028153.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.GAG-pre-integrase domain
EggNOG OGs37THH@33090,3GG2K@35493,3IMWS@38820,3M2QC@4447,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPoales
Best eggNOG OGNA|NA|NA
Exons1
Model size906
Cds size774
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig152.3563.1prot_F-serratus_M_contig152.3563.1Fucus serratus malepolypeptideF-serratus_M_contig152 210130..210903 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929504.1025362-UTR-F-serratus_M_contig152:210018..2101291622929504.1025362-UTR-F-serratus_M_contig152:210018..210129Fucus serratus maleUTRF-serratus_M_contig152 210019..210129 -
1690962882.7989697-UTR-F-serratus_M_contig152:210018..2101291690962882.7989697-UTR-F-serratus_M_contig152:210018..210129Fucus serratus maleUTRF-serratus_M_contig152 210019..210129 -
1622929504.130388-UTR-F-serratus_M_contig152:210903..2109241622929504.130388-UTR-F-serratus_M_contig152:210903..210924Fucus serratus maleUTRF-serratus_M_contig152 210904..210924 -
1690962882.8205462-UTR-F-serratus_M_contig152:210903..2109241690962882.8205462-UTR-F-serratus_M_contig152:210903..210924Fucus serratus maleUTRF-serratus_M_contig152 210904..210924 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929504.1134121-CDS-F-serratus_M_contig152:210129..2109031622929504.1134121-CDS-F-serratus_M_contig152:210129..210903Fucus serratus maleCDSF-serratus_M_contig152 210130..210903 -
1690962882.8120344-CDS-F-serratus_M_contig152:210129..2109031690962882.8120344-CDS-F-serratus_M_contig152:210129..210903Fucus serratus maleCDSF-serratus_M_contig152 210130..210903 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig152.3563.1

>prot_F-serratus_M_contig152.3563.1 ID=prot_F-serratus_M_contig152.3563.1|Name=mRNA_F-serratus_M_contig152.3563.1|organism=Fucus serratus male|type=polypeptide|length=258bp
MNPRNMEVLRNKKGNGVEYTGIISGCDICSVTKSKQQAHPKKSMRKTTRP
MKLVYTDLMGPFTPAAKGGYRLVSKFTDDYLRMKEIFLLKNKIEAAESLH
QYNMTVAAPLGLRIENLRCDKGGEYTGQECRTLCVGAGINIEYTATNTPQ
QNGVSERDGHTLAKITRCLMKDGDVPPFMWGELLFTATYLANRSAHSTLE
GATPYSKMHNLEPDLTGLRAIGARAFVHRETYTKKLEDRAFEGKLCRYSH
NSKAYRI*
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mRNA from alignment at F-serratus_M_contig152:210019..210924-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig152.3563.1 ID=mRNA_F-serratus_M_contig152.3563.1|Name=mRNA_F-serratus_M_contig152.3563.1|organism=Fucus serratus male|type=mRNA|length=906bp|location=Sequence derived from alignment at F-serratus_M_contig152:210019..210924- (Fucus serratus male)
TGGCACCGCCGACTGGGACACATGAACCCCCGCAACATGGAGGTACTGCG
CAACAAGAAAGGGAACGGAGTGGAGTACACCGGGATCATCTCGGGCTGCG
ATATCTGCTCCGTGACCAAAAGCAAGCAACAAGCGCACCCAAAGAAAAGC
ATGCGAAAGACCACCAGACCTATGAAACTCGTCTACACGGACCTCATGGG
ACCATTCACACCGGCAGCGAAAGGAGGATACCGGCTCGTCAGCAAGTTCA
CAGATGACTATTTGCGCATGAAAGAGATCTTCTTGCTCAAGAACAAGATC
GAGGCCGCCGAATCGCTACACCAGTACAACATGACTGTGGCCGCTCCGTT
AGGACTCCGGATCGAAAATCTTCGATGCGACAAAGGTGGCGAATATACTG
GACAGGAGTGCAGGACCCTGTGTGTCGGAGCGGGGATCAATATCGAGTAT
ACCGCGACCAACACGCCACAGCAAAACGGAGTATCCGAGAGAGATGGACA
TACACTGGCCAAGATCACCCGATGCCTTATGAAGGACGGGGACGTTCCCC
CGTTCATGTGGGGAGAGCTGTTGTTCACTGCCACATACTTAGCCAACAGA
TCCGCCCATTCCACTCTGGAAGGGGCCACCCCATACTCCAAAATGCACAA
TTTGGAGCCGGACCTCACGGGCTTACGCGCCATCGGAGCCAGAGCATTCG
TCCACCGTGAGACTTACACCAAGAAGCTGGAAGACAGGGCCTTCGAGGGA
AAACTGTGCAGATACAGCCACAACAGCAAGGCGTACCGCATCTAAAATCC
GGCCAAAGGTACGGTCGTGGAGAGCCGGAACGTGACCTTCCTGGAAACAC
CGGCATACACTCTACCTCCGGATGTCACGACGGAAGACTACCACTACGAG
GAAGAC
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Coding sequence (CDS) from alignment at F-serratus_M_contig152:210019..210924-

>mRNA_F-serratus_M_contig152.3563.1 ID=mRNA_F-serratus_M_contig152.3563.1|Name=mRNA_F-serratus_M_contig152.3563.1|organism=Fucus serratus male|type=CDS|length=1548bp|location=Sequence derived from alignment at F-serratus_M_contig152:210019..210924- (Fucus serratus male)
ATGAACCCCCGCAACATGGAGGTACTGCGCAACAAGAAAGGGAACGGAGT
GGAGTACACCGGGATCATCTCGGGCTGCGATATCTGCTCCGTGACCAAAA
GCAAGCAACAAGCGCACCCAAAGAAAAGCATGCGAAAGACCACCAGACCT
ATGAAACTCGTCTACACGGACCTCATGGGACCATTCACACCGGCAGCGAA
AGGAGGATACCGGCTCGTCAGCAAGTTCACAGATGACTATTTGCGCATGA
AAGAGATCTTCTTGCTCAAGAACAAGATCGAGGCCGCCGAATCGCTACAC
CAGTACAACATGACTGTGGCCGCTCCGTTAGGACTCCGGATCGAAAATCT
TCGATGCGACAAAGGTGGCGAATATACTGGACAGGAGTGCAGGACCCTGT
GTGTCGGAGCGGGGATCAATATCGAGTATACCGCGACCAACACGCCACAG
CAAAACGGAGTATCCGAGAGAGATGGACATACACTGGCCAAGATCACCCG
ATGCCTTATGAAGGACGGGGACGTTCCCCCGTTCATGTGGGGAGAGCTGT
TGTTCACTGCCACATACTTAGCCAACAGATCCGCCCATTCCACTCTGGAA
GGGGCCACCCCATACTCCAAAATGCACAATTTGGAGCCGGACCTCACGGG
CTTACGCGCCATCGGAGCCAGAGCATTCGTCCACCGTGAGACTTACACCA
AGAAGCTGGAAGACAGGGCCTTCGAGGGAAAACTGTGCAGATACAGCCAC
AACAGCAAGGCGTACCGCATCTAAATGAACCCCCGCAACATGGAGGTACT
GCGCAACAAGAAAGGGAACGGAGTGGAGTACACCGGGATCATCTCGGGCT
GCGATATCTGCTCCGTGACCAAAAGCAAGCAACAAGCGCACCCAAAGAAA
AGCATGCGAAAGACCACCAGACCTATGAAACTCGTCTACACGGACCTCAT
GGGACCATTCACACCGGCAGCGAAAGGAGGATACCGGCTCGTCAGCAAGT
TCACAGATGACTATTTGCGCATGAAAGAGATCTTCTTGCTCAAGAACAAG
ATCGAGGCCGCCGAATCGCTACACCAGTACAACATGACTGTGGCCGCTCC
GTTAGGACTCCGGATCGAAAATCTTCGATGCGACAAAGGTGGCGAATATA
CTGGACAGGAGTGCAGGACCCTGTGTGTCGGAGCGGGGATCAATATCGAG
TATACCGCGACCAACACGCCACAGCAAAACGGAGTATCCGAGAGAGATGG
ACATACACTGGCCAAGATCACCCGATGCCTTATGAAGGACGGGGACGTTC
CCCCGTTCATGTGGGGAGAGCTGTTGTTCACTGCCACATACTTAGCCAAC
AGATCCGCCCATTCCACTCTGGAAGGGGCCACCCCATACTCCAAAATGCA
CAATTTGGAGCCGGACCTCACGGGCTTACGCGCCATCGGAGCCAGAGCAT
TCGTCCACCGTGAGACTTACACCAAGAAGCTGGAAGACAGGGCCTTCGAG
GGAAAACTGTGCAGATACAGCCACAACAGCAAGGCGTACCGCATCTAA
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