mRNA_F-serratus_M_contig1519.3557.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1519.3557.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE) HSP 1 Score: 249 bits (637), Expect = 2.000e-74 Identity = 139/229 (60.70%), Postives = 168/229 (73.36%), Query Frame = 3
Query: 3 VESDAEQKYDGRWKEMRGWAMKAARKENSRAASSGMGGQPPAKRSRVLDGVSRPKEPRFASYGRGAHPGSTEDGEGAGGSEEQQLKQQVDAEIERYNALYVRADELDTRDVLPWWQQTGRKMFAYLAPVAQQVFGNQAAAAQVERDFSACGNLLVGNRSRIDTYWVEMLMFLKVNYKHIPALKDIPKIADKDIRRCLPARFNGDADADLKAAEAAFDVVNNTS-TDIGL 686
++++ +QK + W +++ A +AARK++S A ++ GGQPP KR L + PRFAS R G TED G G SE++ L QQV E+ER+ ALY+ A+ELDTR+VLPWW+ TGRKMF LAPVAQQV GNQA AAQVERDFS+C NLL NRSRIDTYWVEM+MFL VNYK IPA KDIP IA KDIR CLP RFNG DADL AAEA FDV+ NT+ +DIG+
Sbjct: 398 IDTEVDQKLNDCWADIKARASEAARKKHS-ARATAEGGQPPLKR---LSTPATKARPRFASLARNRVRGDTED-VGEGDSEDKVLMQQVSQELERFQALYMTAEELDTREVLPWWRNTGRKMFPCLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNG-GDADLAAAEATFDVIENTNNSDIGV 620
BLAST of mRNA_F-serratus_M_contig1519.3557.1 vs. uniprot
Match: A0A6H5KSA7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA7_9PHAE) HSP 1 Score: 211 bits (537), Expect = 3.440e-65 Identity = 101/138 (73.19%), Postives = 113/138 (81.88%), Query Frame = 3
Query: 255 LKQQVDAEIERYNALYVRADELDTRDVLPWWQQTGRKMFAYLAPVAQQVFGNQAAAAQVERDFSACGNLLVGNRSRIDTYWVEMLMFLKVNYKHIPALKDIPKIADKDIRRCLPARFNGDADADLKAAEAAFDVVNNT 668
L Q V EIERY++LY+ A+ELDTR++LPWW+QTGRK F YLAPVAQQVFGNQA AAQVERDFS C NLL NRSR+DTYWVEM+MFL N++HIP KDIP IA KDI CLP RFNG DADL AAEAAFDV+ NT
Sbjct: 4 LMQHVSQEIERYHSLYITAEELDTREILPWWRQTGRKTFPYLAPVAQQVFGNQAGAAQVERDFSGCANLLTRNRSRMDTYWVEMVMFLHANFEHIPGFKDIPMIAAKDIHTCLPPRFNG-GDADLAAAEAAFDVIKNT 140
BLAST of mRNA_F-serratus_M_contig1519.3557.1 vs. uniprot
Match: A0A6H5JVT2_9PHAE (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT2_9PHAE) HSP 1 Score: 211 bits (536), Expect = 5.590e-64 Identity = 104/137 (75.91%), Postives = 116/137 (84.67%), Query Frame = 3
Query: 279 IERYNALYVRADELDTRDVLPWWQQTGRKMFAYLAPVAQQVFGNQAAAAQVERDFSACGNLLVGNRSRIDTYWVEMLMFLKVNYKHIPALKDIPKIADKDIRRCLPARFNGDADADLKAAEAAFDVVNNTS-TDIGL 686
I+R+ ALY+ A+ELDTR+VLPWW+ TGRKMF YLAPVAQQV GNQA AAQVERDFS+C NLL NRSRIDTYWVEM+MFL VNYK IPA KDIP IA KDIR CLP RFNG DADL AAEAAFDV+ NT+ +DIG+
Sbjct: 87 IDRFQALYMTAEELDTREVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNG-GDADLAAAEAAFDVIENTNNSDIGV 222
BLAST of mRNA_F-serratus_M_contig1519.3557.1 vs. uniprot
Match: A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE) HSP 1 Score: 212 bits (540), Expect = 2.210e-63 Identity = 118/224 (52.68%), Postives = 157/224 (70.09%), Query Frame = 3
Query: 3 VESDAEQKYDGRWKEMRGWAMKAARKENSRAASSGMGGQPPAKRSRVLDGVSRP-KEPRFASYGRGAHPGSTEDGEGAGGSEEQQLKQQVDAEIERYNALYVRADELDTRDVLPWWQQTGRKMFAYLAPVAQQVFGNQAAAAQVERDFSACGNLLVGNRSRIDTYWVEMLMFLKVNYKHIPALKDIPKIADKDIRRCLPARFNGDADADLKAAEAAFDVVNNTS 671
++S+ K DG W +++ A +AAR+ N R+ S G QP KR R S ++ RF+ +GRG ST+D SE+++L + V E+E Y +L+++ADELD R+VLPWW++TG+ +F +LAPVAQQVFGNQAA +QVERDFS G LL NRSR+DTYWVE++MFL N+ HIP LK IP +A K+IR CLPARF+G DADL AAEA FDV+ NT+
Sbjct: 82 MDSEVTAKLDGCWADIKRRAWEAARERNRRSESLDDGVQPLHKRFRGESSTSSATRKSRFSLFGRGDARSSTDDMADED-SEDRKLGEVVAGELEHYKSLFIKADELDCREVLPWWKRTGKNIFPHLAPVAQQVFGNQAAVSQVERDFSGVGILLAPNRSRMDTYWVEIVMFLNANFAHIPPLKQIPMVAAKNIRSCLPARFHG-RDADLMAAEAIFDVLMNTA 303
BLAST of mRNA_F-serratus_M_contig1519.3557.1 vs. uniprot
Match: A0A6H5KP16_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP16_9PHAE) HSP 1 Score: 161 bits (408), Expect = 2.520e-46 Identity = 83/108 (76.85%), Postives = 89/108 (82.41%), Query Frame = 3
Query: 366 MFAYLAPVAQQVFGNQAAAAQVERDFSACGNLLVGNRSRIDTYWVEMLMFLKVNYKHIPALKDIPKIADKDIRRCLPARFNGDADADLKAAEAAFDVVNN-TSTDIGL 686
MF YLAPVAQQV GNQA AAQVERDFS+C NLL NRSRIDTYWVEM+MFL VNYK IPA KDIP IA KDIR CLP RFNG DADL AAEAAFDV+ N ++DIG+
Sbjct: 1 MFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNG-GDADLAAAEAAFDVIENINNSDIGV 107
BLAST of mRNA_F-serratus_M_contig1519.3557.1 vs. uniprot
Match: A0A6H5KBM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM2_9PHAE) HSP 1 Score: 158 bits (399), Expect = 2.850e-42 Identity = 95/170 (55.88%), Postives = 109/170 (64.12%), Query Frame = 3
Query: 180 ASYGRGAHPGSTEDGEGAGGSEEQQLKQQVDAEIERYNALYVRADELDTRDVLPWWQQTGRKMFAYLAPVAQQVFGNQAAAAQVERDFSACGNLLVGNRSRIDTYWVEMLMFLKVNYKHIPALKDIPKIADKDIRRCLPARFNGDADADLKAAEAAFDVVNNTS-TDIGL 686
+S G+ G T+D G G SE++ L QQV E+ER+ ALY+ A E V GNQA AAQVERDFS+C NLL NRSRIDTYWVEM+MFL VNYK IPA KDIP IA KDIR CLP RFNG DADL AAEAAFDV+ NT+ +DIG+
Sbjct: 183 SSLGKNRVRGDTKD-VGEGDSEDKVLMQQVSQELERFQALYMTAGE---------------------------VLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKCIPAFKDIPMIAAKDIRTCLPPRFNG-GDADLAAAEAAFDVIENTNNSDIGV 323
BLAST of mRNA_F-serratus_M_contig1519.3557.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 159 bits (403), Expect = 5.050e-40 Identity = 98/230 (42.61%), Postives = 135/230 (58.70%), Query Frame = 3
Query: 3 VESDAEQKYDGRWKEMRGWAMKAARKENSRAASSGMGGQPPAKRSRVLDGVSRPKE---PRFASYGRGAHPGSTEDGEGAGGSEEQQ----LKQQVDAEIERYNALYVRADELDTRDVLPWWQQTGRKMFAYLAPVAQQVFGNQAAAAQVERDFSACGNLLVGNRSRIDTYWVEMLMFLKVNYKHIPALKDIPKIADKDIRRCLPARFNGDADADLKAAEAAFDVVNNTS 671
++ + K D WKE++ A++A +KE + AASSG G KR+R R + FA++GR GG EE + ++Q+V EI RY +++ +++L +VL +W TGR F L VAQQ FG+Q +AA VERDFS CG LV NRSR++ YWVEM+MFL N+K IP +IP I KDIR+CLPA+F G D DL +AE A D + N +
Sbjct: 627 MDEEVTAKLDETWKEIKERAVEAVKKEQA-AASSGPGAAGVFKRARTAGXXXRRRPVDGDEFAAFGRSV-----------GGVEESKQGDAVEQEVANEIMRYKGVFMTSNDLHPTEVLSYWATTGRHSFPALKHVAQQTFGSQPSAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLNANFKFIPKYDNIPSIDSKDIRKCLPAKFKG-TDEDLLSAEMALDPLRNNT 843
BLAST of mRNA_F-serratus_M_contig1519.3557.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 147 bits (372), Expect = 2.500e-36 Identity = 88/205 (42.93%), Postives = 124/205 (60.49%), Query Frame = 3
Query: 6 ESDAEQKYDGRWKEMRGWAMKAARKENSRAASSGMG-GQPPAKRSRVLDGV-SRPK--EPRFASYGRGAHPGSTEDGEGAGGSEEQQLKQQVDAEIERYNALYVRADELDTRDVLPWWQQTGRKMFAYLAPVAQQVFGNQAAAAQVERDFSACGNLLVGNRSRIDTYWVEMLMFLKVNYKHIPALKDIPKIADKDIRRCLPARFN 608
+ D +K +G W E++ A+ A + E +R A G G G P KR+R V SR K E F+ +G S DG + ++++V EI RY ++++ +L DVL +W + G++MF L VAQQ FG+QA+AAQ+ERDFS CG GNRSR + YW+EM+M LK NY+ IP KDIP I KDIR+CLPA+++
Sbjct: 384 DEDVREKLEGIWAEIKKRAVTAVKTEQNRVAGEGGGQGSDPFKRARTSGAVPSRRKNYEDDFSMFGCNEVAPSQSDG-----GDVDFVEEEVSGEIIRYKGVFMKPIDLPPSDVLAYWNKVGKQMFPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWLEMVMVLKGNYELIPDYKDIPSIDSKDIRKCLPAKYS 583
BLAST of mRNA_F-serratus_M_contig1519.3557.1 vs. uniprot
Match: A0A6H5JN28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN28_9PHAE) HSP 1 Score: 127 bits (319), Expect = 1.230e-31 Identity = 74/141 (52.48%), Postives = 84/141 (59.57%), Query Frame = 3
Query: 267 VDAEIERYNALYVRADELDTRDVLPWWQQTGRKMFAYLAPVAQQVFGNQAAAAQVERDFSACGNLLVGNRSRIDTYWVEMLMFLKVNYKHIPALKDIPKIADKDIRRCLPARFNGDADADLKAAEAAFDVVNNTST-DIGL 686
V EIERY+ LY+ A+E G + AA VERDFS C NLL NRSR+DTYWVEM+MFL N++HIP KDIP IA KDI CLP RFN DADL AAEAAFDV+ NT T D+GL
Sbjct: 112 VSQEIERYHLLYITAEE-----------------------------GYERAA--VERDFSGCANLLTRNRSRMDTYWVEMVMFLHANFEHIPGFKDIPMIAAKDIHTCLPPRFNR-GDADLAAAEAAFDVIENTETGDVGL 220
BLAST of mRNA_F-serratus_M_contig1519.3557.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE) HSP 1 Score: 133 bits (335), Expect = 1.340e-31 Identity = 93/229 (40.61%), Postives = 129/229 (56.33%), Query Frame = 3
Query: 3 VESDAEQKYDGRWKEMRGWAMKAARKENSRAASSGMGGQP--PAKRSRVL-DGVSRPK--EPRFA---SYGRGAHPGSTEDGEGAGGSEEQQLKQQVDAEIERYNALYVRADELDTRDVLPWWQQTGRKMFAYLAPVAQQVFGNQAAAAQVERDFSACGNLLVGNRSRIDTYWVEMLMFLKVNYKHIPALKDIPKIADKDIRRCLPARFNGDADADLKAAEAAFDVVNN 665
+ D E K W ++ A++A +++ ++A SG GG P KR+R +G +R E FA + G GS +DG+ + V EI+R AL + + +L RDVL +W+Q+GR F L VAQQ FG+QA AAQ+ERDFS G L NR+R+D YWVEM++FLK N++ IP DIP + K IR CLPA+F G + L AE A D + N
Sbjct: 280 TDEDVEDKKAEAWGMIKKRAIQAVKEDQAQANGSGDGGGDAGPFKRARTSGNGSARNDAGEDHFAVLCTAGAVEQSGSGDDGDLS-----------VAGEIQRSRALQMNSSDLQPRDVLNYWKQSGRHAFPALNYVAQQRFGSQAYAAQIERDFSTGGLLGASNRNRLDEYWVEMVLFLKANFQCIPGYDDIPNMDSKSIRECLPAKFKGTNEY-LLDAEMALDPLEN 496 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1519.3557.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1519.3557.1 >prot_F-serratus_M_contig1519.3557.1 ID=prot_F-serratus_M_contig1519.3557.1|Name=mRNA_F-serratus_M_contig1519.3557.1|organism=Fucus serratus male|type=polypeptide|length=214bp MRGWAMKAARKENSRAASSGMGGQPPAKRSRVLDGVSRPKEPRFASYGRGback to top mRNA from alignment at F-serratus_M_contig1519:5417..6718- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1519.3557.1 ID=mRNA_F-serratus_M_contig1519.3557.1|Name=mRNA_F-serratus_M_contig1519.3557.1|organism=Fucus serratus male|type=mRNA|length=1302bp|location=Sequence derived from alignment at F-serratus_M_contig1519:5417..6718- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1519:5417..6718- >mRNA_F-serratus_M_contig1519.3557.1 ID=mRNA_F-serratus_M_contig1519.3557.1|Name=mRNA_F-serratus_M_contig1519.3557.1|organism=Fucus serratus male|type=CDS|length=1284bp|location=Sequence derived from alignment at F-serratus_M_contig1519:5417..6718- (Fucus serratus male)back to top |