mRNA_F-serratus_M_contig1507.3522.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1507.3522.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 679 bits (1752), Expect = 4.710e-241 Identity = 345/505 (68.32%), Postives = 402/505 (79.60%), Query Frame = 1
Query: 31 TSTFKRSMLAV-GSLVLAAAANTPSPNDAISKPECNSTNPVSVRYSGTTARLYLESADNSTRGGCVTLGDIWTARAGKAPLYAVDPVNHTISEEATGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDASTFINLRAHGGSLDFLSTKVFSWDNSTNSPDVNLTDDGRSYISTVSELIVNASETCDGRAKSDMGEARMDIVDSEMGYLGFLDSESYGLTWKVRGFCTNKTNLEIFDEVNVYGNIYGSDIHHNYYGVHTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNGYHGIIASKRCNDISIQGNEVYGGAEASAGIFLHXXXXXXXXXXXXXXDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGWADNYFTDNAILNSTKYNVYTYEGSDGPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNTF----VDTTSLRFNDSIGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPVC 1530
TS+F ++L + S AAAA+T SPND ISKP+C+S VS+RY+GTT RLYLESAD TRGGC TLG IW +RAGKAPLYAVDP + +SE TGTWLLTE+LYVEDGITL+V+G+ GGD+DELRLLS + T+INLRAHGGSLDF+ TKVFSWD STNSPD + TD GRSYIS VSE++ + ETC+G AK+ MGEARMDI +SE+GYLGF DSESYGLTWKVRGFC +K+N EIFD+VNVYGN+Y SDIHH +G++T+GHQQGDWR N M DN+GYGFDPHDDSD++TIHDN VYNNGYHGIIASKRCN +SIQGNEVYGGAE SAGIFLH DNGDAG+A LESFNA VS NTFENNKYGVR SVG ADN F++N I N++KYN YTY GSD PDVV SGR QNNVFS N GA+E IK+KE+D QFLDN F D +RF+D++ VM GN+GLD + ELKV+N +CFDG SDSG+EPVC
Sbjct: 9 TSSFGLALLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETD-GRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGYEPVC 512
BLAST of mRNA_F-serratus_M_contig1507.3522.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 652 bits (1681), Expect = 2.510e-230 Identity = 325/466 (69.74%), Postives = 375/466 (80.47%), Query Frame = 1
Query: 148 VSVRYSGTTARLYLESADN-STRGGCVTLGDIWTARAGKAPLYAVDPVNHTISEEATGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDASTFINLRAHGGSLDFLSTKVFSWDNSTNSPDVNLTDDGRSYISTVSELIVNASETCDGRAKSDMGEARMDIVDSEMGYLGFLDSESYGLTWKVRGFCTNKTNLEIFDEVNVYGNIYGSDIHHNYYGVHTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNGYHGIIASKRCNDISIQGNEVYGGAEASAGIFLHXXXXXXXXXXXXXXDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGWADNYFTDNAILNSTKYNVYTYEGSDGPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNTF----VDTTSLRFNDSIGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPVC 1530
VS+RY+GTTARLYLESADN +TRGGCVTLG IW +RAGK PLYAVDP + +S ATGTWLLTE+LYVEDGITL+V+GS GGD+DELRLLS TFINLRAHGGSLDF+STKVFSWD STNSPD + TD GRSYIS +SE+I + ETC+G AK+ MGEARMDI SE+GYLG+ DSESYGLTWKVRGFC +K+N E+FD+VNVYGN+Y SDIHH +G++T+GHQQGDWR N M DN+GYGFDPHDDSD++TIHDN VYNNGYHGIIASKRCN +SIQGNEVYGGAE SAGIFLH DNGDAG+A LESFNA VS NTFENNKYGVRFSVG ADN F++N I N+ +YN Y+Y G+D PDVV SGR QNNVFS N GA+E IK+KE+D QFLDN F D +RF+++ +M GN+GLD E ELKV N ACFDG +DSG+EPVC
Sbjct: 44 VSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETD-GRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPVC 508
BLAST of mRNA_F-serratus_M_contig1507.3522.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE) HSP 1 Score: 634 bits (1635), Expect = 1.770e-223 Identity = 332/495 (67.07%), Postives = 402/495 (81.21%), Query Frame = 1
Query: 43 KRSMLAVGSLVLAAAANTPSPNDAISKPECNSTNPVSVRYSGTTARLYLESADNSTRGGCVTLGDIWTARAGKAPLYAVDPVNHTISEEATGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDASTFINLRAHGGSLDFLSTKVFSWDNSTNSPDVNLTDDGRSYISTVSELIVNASETCDGRAKSDMGEARMDIVDSEMGYLGFLDSESYGLTWKVRGFCTNKTNLEIFDEVNVYGNIYGSDIHHNYYGVHTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNGYHGIIASKRCNDISIQGNEVYGGAEASAGIFLHXXXXXXXXXXXXXXDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGWADNYFTDNAILNSTKYNVYTYEGSDGPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNTFVDTTSLRFNDSIGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPV 1527
K +++ + +L LAA +T SPN+ I KPEC+ + VS+RYS RLYLESAD+ TRGGCVTL IW + G+APLYAVD + IS+ ATGTWLLTE+L+VEDGITL+VHG+S GGD+DELRLLS + TFINLRAHGGSLDFLSTKVF+WD S N PD + +DGRSY+S VSE+I + S+TC+GRAK++MGEARMDI DSEMGYLG+ SESYGLTWKVRGFC +K+N ++F++VNVYGNIY SDIHHN +GV+T+GHQQGDWR N M DN+GYGFDPHDDSD++TIHDN VY+NGYHGIIASKRCN +SIQGNEVYGGA +SAGIFLH XXXXXXXXXXXXX DAG+A +ESFNA VS+N FENNKYG+RFSVG N F +N I ST+Y+ Y+Y GSD PDVV+SGR Q+NVF N I+G E+IKL ++D QF+DNTF D T++RFND+ +M GN GL++ + LKV NGA FD SSD GFEP+
Sbjct: 7 KSALVGILALKLAAGKDTKSPNEPIPKPECDESIAVSIRYSSVYERLYLESADSKTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRD-EEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVDSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGNIGLNMSK--LKVVNGASFDASSDYGFEPI 498
BLAST of mRNA_F-serratus_M_contig1507.3522.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 603 bits (1555), Expect = 9.860e-212 Identity = 301/469 (64.18%), Postives = 366/469 (78.04%), Query Frame = 1
Query: 121 KPECNSTNPVSVRYSGTTARLYLESADNSTRGGCVTLGDIWTARAGKAPLYAVDPVNHTISEEATGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDASTFINLRAHGGSLDFLSTKVFSWDNSTNSPDVNLTDDGRSYISTVSELIVNASETCDGRAKSDMGEARMDIVDSEMGYLGFLDSESYGLTWKVRGFCTNKTNLEIFDEVNVYGNIYGSDIHHNYYGVHTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNGYHGIIASKRCNDISIQGNEVYGGAEASAGIFLHXXXXXXXXXXXXXXDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGWADNYFTDNAILNSTKYNVYTYEGSDGPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNTFVDTTSLRFNDSIGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPV 1527
KP+C+S+ VSVRY+ +ARLY+ESA+ TRGGCVTL IW + +PLYAVDP + +S ATGTWLLTE++YVEDGITLQVHG S GGD+DELRLLS + TFI+LRA+GGSLDFLSTKVF+WD S N+PD + +D GRSYIS VSE+I + +TC+GRAK++MGEARMDI +SEM YLG+ +E+YGLTWKVRGFC +K N E+FD+VNVYGNIY SDIHHN +GV+T+GHQQGDWR N M DN+GYGFDPHDDSD++TIHDN V+NNGYHGIIASKRCN +SIQGNEVYGG+ SAGIFLH DNGDAG+A LESFNA VS+NTFENNKYGVR SVG N F+ N I S ++N ++Y G+D P+VV+SGR Q+NVF N I+G E+I LKE+D QF+DNTF D ++RF D+ +M GN+GL + LKV GA FD SSD GFEP+
Sbjct: 7 KPDCDSSIAVSVRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESD-GRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNTGLA--DSTLKVDRGATFDESSDHGFEPI 472
BLAST of mRNA_F-serratus_M_contig1507.3522.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA) HSP 1 Score: 582 bits (1501), Expect = 3.920e-203 Identity = 301/484 (62.19%), Postives = 348/484 (71.90%), Query Frame = 1
Query: 85 AANTPSPNDAISKPECNSTNPVSVRYSGTTARLYLESADNSTRGGCVTLGDIWTARAGKAPLYAVDPVNHTISEEATGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDASTFINLRAHGGSLDFLSTKVFSWDNSTNSPDVNLTDD--GRSYISTVSELIVNASETCDGRAKSDMGEARMDIVDSEMGYLGFLDSESYGLTWKVRGFCTNKTNLEIFDEVNVYGNIYGSDIHHNYYGVHTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNGYHGIIASKRCNDISIQGNEVYGGAEASAGIFLHXXXXXXXXXXXXXXDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGWADNYFTDNAILNSTKYNVYTYEGSDGPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNTFVDTTSLRFNDSIGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPVC 1530
AANT S N AI+KP C S+ VS+RYS T+ RLYLESAD +TRGGCVTL DIW G APLYAV P + +S TGTWLLTE LYVEDGITLQVHG S GG +DELRLLS + FINLRAHGGSLDF+STKVF+WD S N TDD GRSYIS VSE+I ++ + CDGRAK +MGEARMDI DSEM YLG+ SESYGLTWKVRG C + +NLE+FD VNVYGNIY SDIHHNY+GV+T+GH+QGDWR N M NT YGFDPHDDSD++TIHDN VYNNG HGIIASKRCN GA S GIFLH DNGDAGMA +E+FNA VSNN FE+NKYG+R SVG ADN F+ N I S+KYNVYTY+GSD P VV+SGR Q+ G E +KL +D +F+DNTF ++RF D G +M GNSGL LKV++G+CFD SDS ++PVC
Sbjct: 21 AANTASRNKAIAKPSCKSSTKVSIRYSKTSKRLYLESADGNTRGGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKV---RTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSDAPWVVDSGRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFKSAKTIRFEDCQGTLMSGNSGLG--GASLKVTDGSCFDKKSDSAYKPVC 499
BLAST of mRNA_F-serratus_M_contig1507.3522.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE) HSP 1 Score: 556 bits (1433), Expect = 9.010e-193 Identity = 302/508 (59.45%), Postives = 354/508 (69.69%), Query Frame = 1
Query: 22 LATTSTFKRSMLAVGSLVL--AAAANTPSPNDAISKPECNSTNPVSVRYSGTTARLYLESADNSTRGGCVTLGDIWTARAGKAPLYAVDPVNHTISEEATGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDASTFINLRAHGGSLDFLSTKVFSWDNSTNSPDVNLTDDG---RSYISTVSELIVNASETCDGRAKSDMGEARMDIVDSEMGYLGFLDSESYGLTWKVRGFCTNKTNLEIFDEVNVYGNIYGSDIHHNYYGVHTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNGYHGIIASKRCNDISIQGNEVYGGAEASAGIFLHXXXXXXXXXXXXXXDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGWADNYFTDNAILNSTKYNVYTYEGSDGPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNTFVDTTSLRFNDSIGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPVC 1530
+AT +T R+ V L A AANT S N AISKP C S+ VS+RYS ++ RLYLESAD TRGGCVTL +IW G APLYAV P + +S ATGTWLLTEDLYVEDGITLQVHG+S GG+++ELRLLS + FINLRAHGGSLDF+STKVF+WD S N + DG RSYIS VSE+I ++ E CDG+AK MGEARMDI DSEM YLG+ SESYGLTWKVRGFC + +N E+FDEVNVYGNIY SDIHHN++GV+T+GH+QGDWR N M N YGFDPHDDSD++TIHDN V G+ S GIFLH XXX NGDAGMA +ESFNA VSNN FE+NKYGVR SVG ADN F+ N I +S+KYNVYTYEGSD P VV+SGR Q+N+FS N I G DE+IKL +D +F+DNTF + RF D+ +M GN+GL LKVS GACFD SDS ++PVC
Sbjct: 1 MATATTMLRTAAIVSLLAARGADAANTSSKNKAISKPSCKSSTKVSIRYSASSKRLYLESADGKTRGGCVTLEEIWKDLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNK----VRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGNTGLG--SATLKVSKGACFDKKSDSDYKPVC 502
BLAST of mRNA_F-serratus_M_contig1507.3522.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI) HSP 1 Score: 554 bits (1428), Expect = 1.170e-190 Identity = 282/481 (58.63%), Postives = 353/481 (73.39%), Query Frame = 1
Query: 91 NTPSPNDAISKPECNSTNPVSVRYSGTTARLYLESADNSTRGGCVTLGDIWTARAG------KAPLYAVDPVNHTISEEATGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDA-------STFINLRAHGGSLDFLSTKVFSWDNSTNSPDVNLTDDGRSYISTVSELIVNASETCDGRAKSDMGEARMDIVDSEMGYLGFLDSESYGLTWKVRGFCTNKTNLEIFDEVNVYGNIYGSDIHHNYYGVHTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNGYHGIIASKRCNDISIQGNEVYGGAEASAGIFLHXXXXXXXXXXXXXXDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGWADNYFTDNAILNSTKYNVYTYEGSDGPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNTFVDTTSLRFNDSIGVVMIGNSGLDLDEVELKVSNGACF 1494
+TPSPN I KPECNST VS+RYS TT RLYLE+ RGGCVT+ IW AR G KAPLYAVDPV+ S+ TGTWLL EDLYVEDGITL+V G+ GG +DELRL S T+INLRAHGGSLDF TKVF WD + NS D++ TD GRSYIS VSE++++ ++TC+G AK+ MGEARMDIV+SEMGY+GF DSESYGLTWKVRGFC +K+N E+FD+VNVYGNIY S++HH + V+T+GHQQGDWR NT+ N+GYG+DPHDDSD++TIHDNVVY+N +HGIIASKRCN++SIQGN VYGG + SAGIFLH NGDAGMA LES NA +S N FE NKYG+R SVG DN+ ++N + N+++Y +YTY+GSD +V +GR Q+N+F N +VG +AIKLKESD + +N F + + F+++ V+ GN GL+ D E+++ ACF
Sbjct: 102 DTPSPNTPIPKPECNSTQAVSIRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETD-GRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMTNTSQYAIYTYQGSDPAEVQPTGRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPGLVEFSNTTENVVTGNVGLE-DATEVELVEPACF 580
BLAST of mRNA_F-serratus_M_contig1507.3522.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI) HSP 1 Score: 531 bits (1369), Expect = 1.390e-184 Identity = 262/361 (72.58%), Postives = 300/361 (83.10%), Query Frame = 1
Query: 148 VSVRYSGTTARLYLESADN-STRGGCVTLGDIWTARAGKAPLYAVDPVNHTISEEATGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDASTFINLRAHGGSLDFLSTKVFSWDNSTNSPDVNLTDDGRSYISTVSELIVNASETCDGRAKSDMGEARMDIVDSEMGYLGFLDSESYGLTWKVRGFCTNKTNLEIFDEVNVYGNIYGSDIHHNYYGVHTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNGYHGIIASKRCNDISIQGNEVYGGAEASAGIFLHXXXXXXXXXXXXXXDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGWADNYFTDNAILNSTK 1227
VS+RY+ +TARLYLESADN +TRGGCVTLG IW +RAGK PLYAVDP + +S ATGTWLLTE+LYVEDGITL+V+GS GGD+DELRLLS TFINLRAHGGSLDF+STKVFSWD STNSPD + TD GRSYIS +SE+I + ETC+G AK+ MGEARMDI SE+GYLG+ DSESYGLTWKVRGFC +K+N E+FD+VNVYGN+Y SDIHH +G++T+GHQQGDWR N M DN+GYGFDPHDDSD++TIHDN VYNNGYHGIIASKRCN +SIQGNEVYGGAE SAGIFLH DNGDAG+A LESFNA VS NTFENNKYGVRFSVG ADN F++N I N+ +
Sbjct: 44 VSIRYAESTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETD-GRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 403
BLAST of mRNA_F-serratus_M_contig1507.3522.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE) HSP 1 Score: 426 bits (1094), Expect = 7.770e-144 Identity = 210/289 (72.66%), Postives = 242/289 (83.74%), Query Frame = 1
Query: 79 AAAANTPSPNDAISKPECNSTNPVSVRYSGTTARLYLESADNSTRGGCVTLGDIWTARAGKAPLYAVDPVNHTISEEATGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDASTFINLRAHGGSLDFLSTKVFSWDNSTNSPDVNLTDDGRSYISTVSELIVNASETCDGRAKSDMGEARMDIVDSEMGYLGFLDSESYGLTWKVRGFCTNKTNLEIFDEVNVYGNIYGSDIHHNYYGVHTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNGYHG 945
AAAA+T SPND ISKP+C+S VS+RY+ +T RLYLESAD TRGGCVTLG IW RAGKAPLYAVDP + SE TGTWLLTE+LYVEDGITL+V+G+ GGD+DELRLLS T+INLRAHGGSLDF+ TKVFSWD STNSPD + TD GRSYIS +SE+I + ETC+G AK+ MGEARMDI +SE+GYLGF DSESYGLTWKVRGFC +K+N IFDEVNVYGN+Y SDIHH +G++T+GHQQGDWR N M DN+GYGFDPHDDSD++TIHDN VYNNG HG
Sbjct: 25 AAAADTASPNDPISKPDCDSDIAVSIRYASSTKRLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPESGNESENETGTWLLTEELYVEDGITLKVYGTGEGGDADELRLLSTTDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETD-GRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGNHG 312
BLAST of mRNA_F-serratus_M_contig1507.3522.1 vs. uniprot
Match: Q7XAJ9_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ9_9PHAE) HSP 1 Score: 397 bits (1021), Expect = 4.760e-133 Identity = 199/322 (61.80%), Postives = 236/322 (73.29%), Query Frame = 1
Query: 565 ELIVNASETCDGRAKSDMGEARMDIVDSEMGYLGFLDSESYGLTWKVRGFCTNKTNLEIFDEVNVYGNIYGSDIHHNYYGVHTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNGYHGIIASKRCNDISIQGNEVYGGAEASAGIFLHXXXXXXXXXXXXXXDNGDAGMAFLESFNATVSNNTFENNKYGVRFSVGWADNYFTDNAILNSTKYNVYTYEGSDGPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNTFVDTTSLRFNDSIGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPVC 1530
E+I ++ E C+G+AK MGEARMDI DSEM YLG+ SESYGLTWKVRGFC + +N E+FDEVNVYGNIY SDIHHN++GV+T+GH+QGDWR N M N YGFDPHDDSD++TIHDN VYNNG HGIIASKRCN G+ S GIFLH XXDNGDAGMA +ESFNA VSNN FE+NKYGVR SVG ADN F+ N I +S++YNVYTYEGSD P VV+SGR Q+N+FS N I G DE+IKL +D +F+DNTF ++RF D+ +M GN+GL LKVS GACFD SDS ++PVC
Sbjct: 6 EIITDSKEKCNGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNYXXDNGDAGMALMESFNADVSNNKFEDNKYGVRMSVGCADNVFSKNVISDSSEYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKSAKTVRFEDAQDTIMSGNTGLG--SATLKVSKGACFDKKSDSDYKPVC 325 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1507.3522.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1507.3522.1 >prot_F-serratus_M_contig1507.3522.1 ID=prot_F-serratus_M_contig1507.3522.1|Name=mRNA_F-serratus_M_contig1507.3522.1|organism=Fucus serratus male|type=polypeptide|length=513bp MCLRSGSLATTSTFKRSMLAVGSLVLAAAANTPSPNDAISKPECNSTNPVback to top mRNA from alignment at F-serratus_M_contig1507:98296..110618- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1507.3522.1 ID=mRNA_F-serratus_M_contig1507.3522.1|Name=mRNA_F-serratus_M_contig1507.3522.1|organism=Fucus serratus male|type=mRNA|length=12323bp|location=Sequence derived from alignment at F-serratus_M_contig1507:98296..110618- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1507:98296..110618- >mRNA_F-serratus_M_contig1507.3522.1 ID=mRNA_F-serratus_M_contig1507.3522.1|Name=mRNA_F-serratus_M_contig1507.3522.1|organism=Fucus serratus male|type=CDS|length=3078bp|location=Sequence derived from alignment at F-serratus_M_contig1507:98296..110618- (Fucus serratus male)back to top |