mRNA_F-serratus_M_contig150.3488.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig150.3488.1 vs. uniprot
Match: A0A6H5JBX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBX7_9PHAE) HSP 1 Score: 560 bits (1443), Expect = 7.660e-192 Identity = 292/379 (77.04%), Postives = 333/379 (87.86%), Query Frame = 2
Query: 488 PGERRDFLKNGLAFFFSSAVVATSAVSPALSDEDLD-LDDESKEKIVQALKEALQSMGEVEVEAAGRKDDRGASRKDVLNASSDVLPNRTPFEMQYELFKRGMELEDEDNFVGAEKQWTEIIENFNSPNFRATSPGNKFLLARAYSNRGNTRLSLQKTREAILDYSESIDLMPEKGEFWLARGVAYEDMADRKLMAQ-DRNMAVARTFYESALADYDHAVVLDPQDPRVYISRGDANTLLGQEREALDNYVRAVNLSPMTPEFRSKVALAFLGVGNREKGAYLVGQLLQRYPNFPEMLLAGAAVAWEEGNLVESQEMYAEAIRLDQRLMDEKFIWLILRWPERPLSMVKALRAASTAPKGSGLDALGLKTLRNIPREVI 1618
P R FLKNGL+ S VA++ SPA+++ D D LD+E+K+KI QAL EAL+ M VE+ G GA K+VL ASSDVLPNR+PFEMQYELFKRGMEL+D D+FVGAE+QWTEIIENFNSPNFRATSPGNK LLARAYSNRGNTRLSLQKTREAILDYSESIDL+PEKGEFWLARGVA+EDMADRK++A+ DRN+ VARTFYESALADYDHAVVLDPQD RVY+SRGDANTLLGQ R+ALDNY+RAVNLSPMTPEFR+KVALA L VG+++KGA L+GQLL RYP++PEMLLA A+VAW +G LVESQEMYAEAIRLDQRLMDE +IWLILRWPE+PLSMVKALR+AS+APKGSGL+ALGLKTL ++PREVI
Sbjct: 65 PCNRARFLKNGLSLLVGSVAVASA--SPAVAETDSDELDEETKQKITQALMEALEGMEGVELTPGG-----GAQSKEVLKASSDVLPNRSPFEMQYELFKRGMELQDADDFVGAERQWTEIIENFNSPNFRATSPGNKVLLARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQDARVYVSRGDANTLLGQGRDALDNYIRAVNLSPMTPEFRAKVALAELQVGHKQKGAQLIGQLLHRYPSYPEMLLAAASVAWSDGELVESQEMYAEAIRLDQRLMDENYIWLILRWPEQPLSMVKALRSASSAPKGSGLEALGLKTLLSMPREVI 436
BLAST of mRNA_F-serratus_M_contig150.3488.1 vs. uniprot
Match: D7FIQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ0_ECTSI) HSP 1 Score: 382 bits (981), Expect = 1.080e-123 Identity = 203/262 (77.48%), Postives = 227/262 (86.64%), Query Frame = 2
Query: 488 PGERRDFLKNGLAFFFSSAVVATSAVSPALSDEDLD-LDDESKEKIVQALKEALQSMGEVEVEAAGRKDDRGASRKDVLNASSDVLPNRTPFEMQYELFKRGMELEDEDNFVGAEKQWTEIIENFNSPNFRATSPGNKFLLARAYSNRGNTRLSLQKTREAILDYSESIDLMPEKGEFWLARGVAYEDMADRKLMAQ-DRNMAVARTFYESALADYDHAVVLDPQDPRVYISRGDANTLLGQEREALDNYVRAVNLSPMTPE 1267
P R FLKNGLA S VA++ SPA+++ D D LD+E+K+KI QAL EAL+ M +E+ G GA KDVL ASSDVLPNR+PFEMQYELFKRGMELED+D+FVGAE+QWTEIIENFNSPNFRAT+PGNK LLARAYSNRGNTRLSLQKTREAILDYSESIDL+PEKGEFWLARGVA+EDMADRK++A+ DRN+ VARTFYESALADYDHAVVLDPQDPRVYISRGDANTLLGQ R+ALDNY+RAVNLSPMTPE
Sbjct: 64 PCNRAGFLKNGLALLVGSVAVASA--SPAVAETDSDELDEETKQKITQALMEALEGMEGMELTPGG-----GAQSKDVLKASSDVLPNRSPFEMQYELFKRGMELEDDDDFVGAERQWTEIIENFNSPNFRATNPGNKVLLARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQDPRVYISRGDANTLLGQGRDALDNYIRAVNLSPMTPE 318
BLAST of mRNA_F-serratus_M_contig150.3488.1 vs. uniprot
Match: A0A835Z1G2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1G2_9STRA) HSP 1 Score: 265 bits (676), Expect = 3.560e-78 Identity = 150/325 (46.15%), Postives = 195/325 (60.00%), Query Frame = 2
Query: 737 VLPNRTPFEMQYELFKRGMELEDEDNFVGAEKQWTE------------IIENFNSPNFRATSPGNKFLLARAYSNRGNTRLSLQKTREAILDYSESIDLMPEKGEFWLARGVAYEDMADRKLMAQDRNMAVARTFYESALADYDHAVVLDPQDPRVYISRGDANTLLGQEREALDNYVRAVNLSPMTPEFRSKVALAFLGVGN----------------REKGAYLVGQLLQRYPNFPEMLLAGAAVAWEEGNLVESQE--------------------------MYAEAIRLDQRLMDEKFIWLILRWPERPLSMVKALRAAST 1549
LPNR+PFE+QYE+FK GMELE +++FV AEKQWTE IIE +P +R +S GN++LLARA++NRG R SL + REAILDYSE++ L+P+K EFWL+RG+AYE +AD K+ + R FYESAL+DYD A+VLDP P+VY+ RGD LL Q REALD Y R + L+P P+ R ALA + GN GA +VG +L P+ P+MLLAGAA+AWE G L ES++ +Y A+ D RL+D++FI LRWP P+SMV+ LR A T
Sbjct: 30 TLPNRSPFELQYEMFKNGMELEGDEDFVAAEKQWTEVNLLSTLHDSLQIIEELETPAWRESSTGNRYLLARAHANRGGARASLGRQREAILDYSEALTLVPDKCEFWLSRGLAYEGLADMKVAMDGCSQEGVRVFYESALSDYDGALVLDPAKPQVYMLRGDVMALLQQHREALDTYRRGLALNPSKPDLRCCTALAEIQCGNIHLXXXXXXXXXXXXXXNMGAAMVGSILHTQPDRPDMLLAGAALAWEAGELAESEKCRTVXXXXXXXXXXXXXXXXXXXXKTLYRMAVAQDVRLLDDRFIVNALRWPAVPVSMVRVLRKAGT 354
BLAST of mRNA_F-serratus_M_contig150.3488.1 vs. uniprot
Match: W7TS28_9STRA (Tetratricopeptide tpr_1 repeat-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS28_9STRA) HSP 1 Score: 200 bits (508), Expect = 1.700e-53 Identity = 110/263 (41.83%), Postives = 167/263 (63.50%), Query Frame = 2
Query: 761 EMQYELFKRGMELEDEDNFVGAEKQWTEIIENFNSPNFRATSPGNKFLLARAYSNRGNTRLSLQKTREAILDYSESIDLMPEKGEFWLARGVAYEDMADRKLMAQDRNMAVARTFYESALADYDHAVVLDPQDPRVYISRGDANTLLGQEREALDNYVRAVNLSPMTPEFRSKVALAFLGVGNREKGAYLVGQLLQRYPNFPEMLLAGAAVAWEEGNLVESQEMYAEAIRLDQRLMDEKFIWLILRWPERPLSMVKALRAAST 1549
E+++E+ K+G++L F AE +TE+I F+S ++ + S K L+A+A+SNRGN R SL + EA+LDYS SI+L P+ E+W RG+A+E +AD L ++++ A FYE+A+ADY+HA+V+DP++ R+Y++ GD T + AL+ Y RA+ L PM+P R KVAL + GN +G Y++ + +R P+F EMLLA AA+ W G VE + Y EA+ D RL D+ ++ + WP L M+ LR A T
Sbjct: 137 ELRFEMLKKGLDLTHAFQFEEAEDVYTELIGLFDS-DYTSLSDQEKQLVAKAFSNRGNVRCSLTRVSEALLDYSRSIELCPDTAEYWTNRGLAFEVIADALLATREKD---AFQFYETAIADYEHALVMDPENHRLYLNAGDVLTRTRRHDLALEYYRRALALFPMSPASRGKVALLEVENGNVGRGMYMLESINRRNPDFAEMLLASAALDWTLGRFVEGVDSYREAVSRDPRLFDDSYLKMDCHWPPTMLKMLDKLREAGT 395
BLAST of mRNA_F-serratus_M_contig150.3488.1 vs. uniprot
Match: A0A0G4F1G1_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F1G1_VITBC) HSP 1 Score: 167 bits (422), Expect = 1.450e-41 Identity = 94/281 (33.45%), Postives = 168/281 (59.79%), Query Frame = 2
Query: 704 SRKDVLNASSDVLPNR-TPFEMQYELFKRGMELEDEDNFVGAEKQWTEIIENFNSPNFRATSPGNKFLLARAYSNRGNTRLSLQKTREAILDYSESIDLMPEKGEFWLARGVAYEDMADRKLMAQDRNMAVARTFYESALADYDHAVVLDPQDPRVYISRGDANTLLGQEREALDNYVRAVNLSPMTPEFRSKVALAFLGVGNREKGAYLVGQLLQRYPNFPEMLLAGAAVAWEEGNLVESQEMYAEAIRLDQRLMDEKFIWLILRWPERPLSMVKALRAA 1543
SR L P R + F+ QY LFK G+E + +F AE +TEII+++ +P + + +F+LARAY++RGNTR+SL + +A++DYS +I+ P++ +FWL R +A E A++ L + ++ A +Y+ AL DY+HA+VL P DPR+Y + G+ TLL AL+ + +A L+P +++++AL +G+ + +++ +++R P++ EM+LA + + W G E +Y +++ + L+D++ + LRWP + ++ LR A
Sbjct: 119 SRTVELLGGPGASPGRLSEFQRQYSLFKAGLEETAKFDFKEAEGIFTEIIDSYETPKAKESERA-RFMLARAYTDRGNTRVSLGELNKALVDYSCAIEYAPDEADFWLNRAIACEQKAEQSLTS---SLQFANQWYKEALEDYEHALVLKPSDPRLYANTGEILTLLEDFDAALEKFRQASALAPSNVAYKARIALLDAQLGDVRRSHFIINDIVRRSPDYWEMVLAKSMLDWNVGRFAEGAYLYDISVQENPLLLDDRHLVRDLRWPPYFVEGLRNLRMA 395
BLAST of mRNA_F-serratus_M_contig150.3488.1 vs. uniprot
Match: D7FIQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ2_ECTSI) HSP 1 Score: 137 bits (346), Expect = 4.470e-35 Identity = 67/83 (80.72%), Postives = 77/83 (92.77%), Query Frame = 2
Query: 1370 MLLAGAAVAWEEGNLVESQEMYAEAIRLDQRLMDEKFIWLILRWPERPLSMVKALRAASTAPKGSGLDALGLKTLRNIPREVI 1618
MLLA A+VAW +G LVESQEM+AEAIRLD RLMDE +IWLILRWPE+PLSMVKALR+AS+APKGSGL+ALGLKTL ++PREVI
Sbjct: 1 MLLAAASVAWSDGELVESQEMFAEAIRLDGRLMDENYIWLILRWPEQPLSMVKALRSASSAPKGSGLEALGLKTLLSMPREVI 83
BLAST of mRNA_F-serratus_M_contig150.3488.1 vs. uniprot
Match: A0A7S1TRX5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRX5_9STRA) HSP 1 Score: 139 bits (349), Expect = 3.310e-32 Identity = 93/273 (34.07%), Postives = 142/273 (52.01%), Query Frame = 2
Query: 749 RTPFEMQYELFKRGMELEDEDNFVGAEKQWTEIIE-NFNSPNFRATSPGNKFLLARAYSNRGNTRLSLQKTREAILDYSESIDLMPEKGEFWLARGVAYEDMADRKLMAQDRNMAVARTFYESALADYDHAVVLDPQDPRVYISRGDANTLLGQEREALDNYVRAVNLSPM--TPEFRSKVALAFLGVGNREKGAYLVGQLLQRYPNF---PEMLLAGAAVAWEEGNLVESQEMYAEAIRLDQRLMDEKFIWLILRWPERPLSMVKALRAAST 1549
R+ E QYEL+ M+ E + GAEK W+ +I+ + SP S +K +LARAYS R R L K A++D S ++ L P+ EFW RG +E A R+L A MA A+ ++SA +DYDH ++LDP + ++ GD LL AL +Y+ + +P K AL + G+ GA ++ ++L+ +++LA AAVAW GN E+ +Y A++ + L D + L WP R L ++K L+A T
Sbjct: 82 RSADERQYELYVAAMQCESVADLEGAEKTWSRLIDASVMSP--VKVSGASKTVLARAYSGRSRVRAGLGKLPPALVDISAAVGLEPDIAEFWAQRGAVFE-AASRELHASGE-MAKAKQLFQSACSDYDHGLMLDPNNAALHERSGDVKVLLEDYVGALQSYMHGLENAPAPGNTALAVKFALVVVQTGDDAMGARILSEILEEDGGMNASEDVMLASAAVAWSAGNYAEAMTLYKAALQQNHTLADTEGAVAALGWPPRSLELLKDLKANRT 350
BLAST of mRNA_F-serratus_M_contig150.3488.1 vs. uniprot
Match: A0A0G4I979_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I979_9ALVE) HSP 1 Score: 96.3 bits (238), Expect = 7.430e-17 Identity = 60/163 (36.81%), Postives = 84/163 (51.53%), Query Frame = 2
Query: 1031 GVAYEDMADRKLMAQDR-NMAVARTF----YESALADYDHAVVLDPQDPRVYISRGDANTLLGQEREALDNYVRAVNLSPMTPEFRSKVALAFLGVGNREKGAYLVGQLLQRYPNFPEMLLAGAAVAWEEGNLVESQEMYAEAIRLDQRLMDEKFIWLILRWP 1504
GVA E +AD D ++ R+F Y AL ++DHA+VL P D R+ ++ G+ G A D Y RA+ SP P KVAL + GN GA LV + ++P+F EM LA +AW G +E +Y A+R + RL + F+ LRWP
Sbjct: 514 GVAEERVADGAEKETDTFSLPSKRSFAVQWYREALDNFDHALVLQPNDHRLCVNMGELYARTGDFATARDFYRRALLASPSDPALLGKVALTEIQTGNLPVGATLVNAVTNKWPSFWEMQLAKGVLAWNNGEFLEGMTLYKVAVRQEPRLSNLNFVKKELRWP 676
BLAST of mRNA_F-serratus_M_contig150.3488.1 vs. uniprot
Match: A0A5J4YW11_PORPP (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YW11_PORPP) HSP 1 Score: 81.3 bits (199), Expect = 4.060e-13 Identity = 83/298 (27.85%), Postives = 130/298 (43.62%), Query Frame = 2
Query: 650 SMGEVEVEAAGRKDDRGASRKDVLNASSDVLPNRTPFEMQYELFKRGMELEDEDNFVGAEKQWTEIIENFNSPNFRATSPGNKFLLARAYSNRGNTRLSLQKTREAILDYSESIDLMPEKGEFWLARGVAYEDMAD--RKLMAQDRNMAVARTFYESALADYDHAVVLDPQDPRVYISRGDANTLLGQEREALDNYVRAVNLSPMTPEFRSKVALAFLGVGNREKGAYLVGQLLQRYPNFPEMLLAGAAVAWEEGNLVESQEMYAEAIRLDQRLMDEKFIWLILRWPERPLSMVKALR 1537
S GEV +A R+ ++ VL F+ +L EL ++ F AEK WTEII A + N A AYSNRGN R S + D P++ + +L GVA E D + A +++ A++R + + DP + G+A+ G+ AL NY RA L + ALA+ +G + + L+++YP FP+M A AA+ WE G+ +++ + A D R D ++I I R+P R + ++ LR
Sbjct: 26 STGEVRSKAEQRRAEKALKENAVLE-----------FKKVTKLQDEAFELTNQLRFAEAEKLWTEII---------ALNTSN----AAAYSNRGNCRTSQRXXXXXXXDXXXXXXXXPDEPDPFLGLGVALEGKRDFPAAIRAYEQSNALSRRRFGT-------------DDPAAINNIGNAHAGRGEWDLALANYKRAAMLDKNFVFALANEALAYAQLGEDQIAVRTMKFLVRKYPYFPDMHAALAALYWETGDYSSAEDEFLLATGQDYRYRDLEWIASIRRFPPRIVRDLENLR 286
BLAST of mRNA_F-serratus_M_contig150.3488.1 vs. uniprot
Match: E1ZIJ6_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZIJ6_CHLVA) HSP 1 Score: 76.6 bits (187), Expect = 5.530e-12 Identity = 52/201 (25.87%), Postives = 94/201 (46.77%), Query Frame = 2
Query: 908 ARAYSNRGNTRLSLQKTREAILDYSESIDLMPEKGEFWLARGVAYEDMADRKLMAQDRNMAVARTFYESALADYDHAVVLDPQDPRVYISRGDANTLLGQEREALDNYVRAVNLSPMTPEFRSKVALAFLGVGNREKGAYLVGQLLQRYPNFPEMLLAGAAVAWEEGNLVESQEMYAEAIRLDQRLMDEKFIWLILRWPER 1510
A +SN GN + ++A+ DYS+++ L PE + LA G + + A ++SA AD D A+ LDP++ + RG+ + L AL ++ A +L+P +R + A G+ + + + ++Y N+ E A AAV W G+ +++ + A+ D+R + +I RWP +
Sbjct: 33 ASGWSNLGNVHQQQGQAQQAVEDYSKAVALAPEVSDCVLALG----------------DSSRALDLWQSAAADCDRAIELDPKEYAAWFDRGNIDLRLQDYAAALTDFGTAADLAPGLGGYRLRQATLMFQQGDVDGARRTMQGVTRKYSNYAEAHAALAAVEWSRGDAERAEQQFYRAVAQDERWNNMGWILENTRWPPK 217 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig150.3488.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig150.3488.1 >prot_F-serratus_M_contig150.3488.1 ID=prot_F-serratus_M_contig150.3488.1|Name=mRNA_F-serratus_M_contig150.3488.1|organism=Fucus serratus male|type=polypeptide|length=456bp MAARQQRKAAAPSSTSLTASLNFSVILGLACTADALSLAPPLRRMSASRAback to top mRNA from alignment at F-serratus_M_contig150:277474..284337- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig150.3488.1 ID=mRNA_F-serratus_M_contig150.3488.1|Name=mRNA_F-serratus_M_contig150.3488.1|organism=Fucus serratus male|type=mRNA|length=6864bp|location=Sequence derived from alignment at F-serratus_M_contig150:277474..284337- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig150:277474..284337- >mRNA_F-serratus_M_contig150.3488.1 ID=mRNA_F-serratus_M_contig150.3488.1|Name=mRNA_F-serratus_M_contig150.3488.1|organism=Fucus serratus male|type=CDS|length=2736bp|location=Sequence derived from alignment at F-serratus_M_contig150:277474..284337- (Fucus serratus male)back to top |