mRNA_F-serratus_M_contig150.3474.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig150.3474.1 vs. uniprot
Match: A0A6H5KBD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD8_9PHAE) HSP 1 Score: 219 bits (558), Expect = 7.690e-65 Identity = 121/181 (66.85%), Postives = 150/181 (82.87%), Query Frame = 1
Query: 4 FLQRVQGLVAQERGETVSGGWDPEIGARRAVRLPELAAEQMRRPEYFYPTRQEREKTMAKLVEREKRVETKRLKLAEVRDVLLPDARDEYTNVLEDTRHPANREAFTAEELRRARDRARAEVDRLTRESKRLEAEVATAERALKDAPYTVETLRAEEKATRALLVDRAEKRRLLMAKQEQK 546
FLQR Q LVAQERG+TV GGWDPEIGARR VRLPEL EQ RR EYFYPT E E + KL ER++R+E K+ KLA V+D LLP+A++EY NVLEDTRHPAN+EAF E+LRRARD A++EVDRL +E++RLE +V++A+RAL+++PYTV++LRAE ATR LL +RA K+RLL AKQ+QK
Sbjct: 23 FLQRAQSLVAQERGDTVRGGWDPEIGARREVRLPELTPEQTRRKEYFYPTAAEVEDKVQKLQERQRRLEDKQAKLAHVKDELLPEAKEEYANVLEDTRHPANKEAFRPEDLRRARDEAKSEVDRLAKEARRLEGDVSSAKRALRESPYTVDSLRAEADATRRLLSERARKQRLL-AKQKQK 202
BLAST of mRNA_F-serratus_M_contig150.3474.1 vs. uniprot
Match: D7FIN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIN4_ECTSI) HSP 1 Score: 201 bits (511), Expect = 4.250e-56 Identity = 111/179 (62.01%), Postives = 139/179 (77.65%), Query Frame = 1
Query: 4 FLQRVQGLVAQERGETVSGGWDPEIGARRAVRLPELAAEQMRRPEYFYPTRQEREKTMAKLVEREKRVETKRLKLAEVRDVLLPDARDEYTNVLEDTRHPANREAFTAEELRRARDRARAEVDRLTRESKRLEAEVATAERALKDAPYTVETLRAEEKATRALLVDRAEKRRLLMAKQE 540
FLQR Q LVAQERG+TVSGGWDPEIGARR V+LP+L EQ RR EYFYPT E E + KL E LA V+D LLP+A++EY NVLEDTRHPAN+EAF E+LRRARD A++EVDRL +E++RLE +V++A+RAL+++PYTV++LRAE ATR LL +RA K+RLL ++E
Sbjct: 1130 FLQRAQSLVAQERGDTVSGGWDPEIGARREVQLPQLTPEQTRRKEYFYPTAAEVEDRVQKLQEXXXXXXXXXXXLAHVKDELLPEAKEEYANVLEDTRHPANKEAFRPEDLRRARDEAKSEVDRLAKEARRLEGDVSSAKRALRESPYTVDSLRAEADATRRLLSERARKQRLLAKRKE 1308
BLAST of mRNA_F-serratus_M_contig150.3474.1 vs. uniprot
Match: D7FTS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTS2_ECTSI) HSP 1 Score: 181 bits (460), Expect = 2.750e-49 Identity = 103/169 (60.95%), Postives = 129/169 (76.33%), Query Frame = 1
Query: 4 FLQRVQGLVAQERGETVSGGWDPEIGARRAVRLPELAAEQMRRPEYFYPTRQEREKTMAKLVEREKRVETKRLKLAEVRDVLLPDARDEYTNVLEDTRHPANREAFTAEELRRARDRARAEVDRLTRESKRLEAEVATAERALKDAPYTVETLRAEEKATRALLVDRAE 510
F+QR +GLVAQERG+TVS GWDPEI ARR VRLPEL+A Q RR EYFYPT E + + KL ER+ R+E KR +LAEVRD LLP+AR E+ +VLEDTRHP N++ + E+LRRAR+ A++EV+RL++E KRLE V +A RAL+D+P TV+ E ATR LL DR E
Sbjct: 593 FVQRAKGLVAQERGDTVSRGWDPEISARRQVRLPELSAGQTRREEYFYPTAVEVQARVDKLRERQCRLEAKRAELAEVRDKLLPEARQEHADVLEDTRHPFNKKTWKPEDLRRAREEAKSEVNRLSKEEKRLEGHVVSAARALRDSPSTVDGTLEEAAATRRLLSDRNE 761
BLAST of mRNA_F-serratus_M_contig150.3474.1 vs. uniprot
Match: D7FMC3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMC3_ECTSI) HSP 1 Score: 176 bits (447), Expect = 1.600e-47 Identity = 99/164 (60.37%), Postives = 126/164 (76.83%), Query Frame = 1
Query: 4 FLQRVQGLVAQERGETVSGGWDPEIGARRAVRLPELAAEQMRRPEYFYPTRQEREKTMAKLVEREKRVETKRLKLAEVRDVLLPDARDEYTNVLEDTRHPANREAFTAEELRRARDRARAEVDRLTRESKRLEAEVATAERALKDAPYTVETLRAEEKATRALL 495
F+QR +GL+AQERG+TVSGGWDPEI ARR VRLPEL+A Q RR EYFYPT E + + KL ER++R+E KR+ LA+VRD LLP+AR EY VLED+RHP NR E+LRRAR+ A++EV RL++E+KRLE + +A RAL+++P TV+ AE ATR LL
Sbjct: 651 FVQRAKGLIAQERGDTVSGGWDPEISARRQVRLPELSAGQARREEYFYPTAAEVQARVDKLRERQRRLEVKRVDLAKVRDDLLPEARREYEYVLEDSRHPFNRATCKPEDLRRAREEAKSEVTRLSKEAKRLEGHLESAARALRESPSTVDGTLAEAAATRRLL 814
BLAST of mRNA_F-serratus_M_contig150.3474.1 vs. uniprot
Match: A0A6H5L329_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L329_9PHAE) HSP 1 Score: 149 bits (376), Expect = 1.810e-39 Identity = 87/149 (58.39%), Postives = 110/149 (73.83%), Query Frame = 1
Query: 49 TVSGGWDPEIGARRAVRLPELAAEQMRRPEYFYPTRQEREKTMAKLVEREKRVETKRLKLAEVRDVLLPDARDEYTNVLEDTRHPANREAFTAEELRRARDRARAEVDRLTRESKRLEAEVATAERALKDAPYTVETLRAEEKATRALL 495
TV+GGWDPEI ARR VRLPEL+A Q RR EYFYPT E + + KL ER++R+E K++ L +VRD LLP AR EY VLED+RHP NR E+LRRAR+ A++EV RL++E+KR E +VATA RAL+++P TV+ AE A R LL
Sbjct: 8 TVNGGWDPEISARRQVRLPELSAGQARRKEYFYPTAAEVQARVDKLRERQRRLEVKQVDLTKVRDELLPKARKEYEYVLEDSRHPFNRATCKPEDLRRAREEAKSEVTRLSKEAKRREGDVATAARALRESPSTVDGTLAEAAAPRRLL 156
BLAST of mRNA_F-serratus_M_contig150.3474.1 vs. uniprot
Match: D7FT01_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT01_ECTSI) HSP 1 Score: 145 bits (365), Expect = 1.620e-36 Identity = 76/122 (62.30%), Postives = 98/122 (80.33%), Query Frame = 1
Query: 4 FLQRVQGLVAQERGETVSGGWDPEIGARRAVRLPELAAEQMRRPEYFYPTRQEREKTMAKLVEREKRVETKRLKLAEVRDVLLPDARDEYTNVLEDTRHPANREAFTAEELRRARDRARAEV 369
F+QR +GLVAQERG+TVSGGWDP+I ARR VRLPEL+A Q RR EYFYPT ++ + T+ KL ER+++++ K+ LA+VRD LLP+AR+EY VLEDTRHP NR T E+LR AR+ A++EV
Sbjct: 577 FVQRAKGLVAQERGDTVSGGWDPKISARRQVRLPELSAGQARREEYFYPTAEKVQGTVDKLRERQRKLKAKQADLAKVRDKLLPEAREEYDYVLEDTRHPVNRVTRTPEDLRSAREEAKSEV 698
BLAST of mRNA_F-serratus_M_contig150.3474.1 vs. uniprot
Match: A0A662XB53_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XB53_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 2.510e-16 Identity = 61/175 (34.86%), Postives = 95/175 (54.29%), Query Frame = 1
Query: 1 AFLQRVQGLVAQERGETVSGGWDPEIGARRAVRLPELAAEQMRRPEYFYPTRQEREKTMAKLVEREKRVETKRLKLAEVRDVLLPDARDEYTNVLEDTRHPANREAFTAEELRRARDRARAEVDRLTRESKRLEAEVATAERALKDAPYTVETLRAEEKATRALLVDRAEKRRLL 525
AF++ V+ L AQ++ +T+ GWDP ARR V+LPEL A Q P + YP+ E E + K ++ R+E KRL+L ++ D L+P A+ EY V ED R+ + F L RD A+ + L +E +++E+A +R + + E +AE + R L + RLL
Sbjct: 512 AFMEHVRLLTAQQQRQTIKAGWDPVRRARRDVQLPELTARQQLNPVFCYPSDVEIEAKLVKFQRQQARLEAKRLRLVQLEDELVPQAKAEYVAVAEDARNEELQRVFGKSTLISLRDDAKQQHLTLCKERDAVKSELAHGQRTWEAQTPSFEQYQAEVELIRGLKAEIRNAPRLL 686
BLAST of mRNA_F-serratus_M_contig150.3474.1 vs. uniprot
Match: A0A225W464_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W464_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 1.140e-15 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 1
Query: 1 AFLQRVQGLVAQERGETVSGGWDPEIGARRAVRLPELAAEQMRRPEYFYPTRQEREKTMAKLVEREKRVETKRLKLAEVRDVLLPDARDEYTNVLEDTRHPANREAFTAEELRRARDRARAEVDRLTRESKRLEAEVATAERALKDAPYTVETLRAEEKATRAL 492
+F+ V+ L AQE+ ET+ GWDP ARR V+LPEL A Q P + YPT E + + K + R+E KR++L E+ D L+P A+ EY V +D R+ + +F L R+ A+ + L +E + E+A ERA + E +AE RAL
Sbjct: 495 SFIDHVRQLAAQEQHETILAGWDPVKRARRDVQLPELTARQQLNPIFCYPTDAEIDARLDKFERQRARIEAKRVRLKELDDELIPQAKAEYVAVADDARNEDLQRSFGKSTLIALREDAKRQHLALCKERDTAKGELAHGERAWSAMTPSFEQYQAEVAQIRAL 658
BLAST of mRNA_F-serratus_M_contig150.3474.1 vs. uniprot
Match: A0A833W8P0_PHYIN (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833W8P0_PHYIN) HSP 1 Score: 78.2 bits (191), Expect = 2.930e-13 Identity = 55/164 (33.54%), Postives = 90/164 (54.88%), Query Frame = 1
Query: 1 AFLQRVQGLVAQERGETVSGGWDPEIGARRAVRLPELAAEQMRRPEYFYPTRQEREKTMAKLVEREKRVETKRLKLAEVRDVLLPDARDEYTNVLEDTRHPANREAFTAEELRRARDRARAEVDRLTRESKRLEAEVATAERALKDAPYTVETLRAEEKATRAL 492
+F+ V+ L AQ++ ET+ GWDP +RR V LPEL ++Q P + YPT E + + K + R+E+KR++L ++ D L+P A+ EY V ED R+ + +F L R++A+ + L ++ + E+A +RA + E +AE RAL
Sbjct: 726 SFIDHVRQLAAQQQRETIKAGWDPVQCSRRDVPLPELTSKQHLNPIFCYPTDIEIDTRLDKFDRQRARIESKRMRLKQLDDELIPQAKAEYVAVAEDARNEDLQRSFGKATLIALREQAKQQHLVLCKDRDTVRGELAHGDRAWAAMTPSFEQYQAEVAQVRAL 889
BLAST of mRNA_F-serratus_M_contig150.3474.1 vs. uniprot
Match: A0A7S2BNQ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BNQ5_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 5.470e-13 Identity = 50/121 (41.32%), Postives = 68/121 (56.20%), Query Frame = 1
Query: 4 FLQRVQGLVAQERGETVSGGWDPEIGARRAVRLPELAAEQMRRPEYFYPTRQEREKTMAKLVEREKRVET--KRLKLAEVRDVLLPDARDEYTNVLEDTRHPANREAFTAEELRRARDRAR 360
F+ V LVAQ+RG+TV GWDPE RR ++LP L AEQ R+ Y Y T +E + K ERE R++ RL AE +V DA+ E+ +VL D R R+ + ++L R AR
Sbjct: 7 FIAHVTALVAQQRGDTVRAGWDPEKKTRRTMQLPPLRAEQERKSLYSYLTEEEANLRLDKYAERETRLKDLQDRLTEAEASEV---DAKREFDDVLADARREDVRQHYEKKQLAEIRANAR 124 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig150.3474.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig150.3474.1 >prot_F-serratus_M_contig150.3474.1 ID=prot_F-serratus_M_contig150.3474.1|Name=mRNA_F-serratus_M_contig150.3474.1|organism=Fucus serratus male|type=polypeptide|length=204bp AFLQRVQGLVAQERGETVSGGWDPEIGARRAVRLPELAAEQMRRPEYFYPback to top mRNA from alignment at F-serratus_M_contig150:75093..76287- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig150.3474.1 ID=mRNA_F-serratus_M_contig150.3474.1|Name=mRNA_F-serratus_M_contig150.3474.1|organism=Fucus serratus male|type=mRNA|length=1195bp|location=Sequence derived from alignment at F-serratus_M_contig150:75093..76287- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig150:75093..76287- >mRNA_F-serratus_M_contig150.3474.1 ID=mRNA_F-serratus_M_contig150.3474.1|Name=mRNA_F-serratus_M_contig150.3474.1|organism=Fucus serratus male|type=CDS|length=1224bp|location=Sequence derived from alignment at F-serratus_M_contig150:75093..76287- (Fucus serratus male)back to top |