mRNA_F-serratus_M_contig1496.3412.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1496.3412.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 109 bits (272), Expect = 5.060e-26 Identity = 48/80 (60.00%), Postives = 63/80 (78.75%), Query Frame = 1
Query: 1 CEHLEDGKYYLRADYRIECDSGKHINLQIYAGFMAMLYTVGIPVFYAILLFRNRDVLVKNDSCRNRCSRISSTSSLWRPY 240
C+ LEDGK YLR DYRIECDS KH Q+YAGFM +LY +GIP+ Y+ILLF++R+VL K+ + R+ +R+ STS LW+PY
Sbjct: 1208 CDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPY 1287
BLAST of mRNA_F-serratus_M_contig1496.3412.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE) HSP 1 Score: 107 bits (268), Expect = 1.760e-25 Identity = 50/80 (62.50%), Postives = 62/80 (77.50%), Query Frame = 1
Query: 1 CEHLEDGKYYLRADYRIECDSGKHINLQIYAGFMAMLYTVGIPVFYAILLFRNRDVLVKNDSCRNRCSRISSTSSLWRPY 240
C+ LEDG Y LR DYRIECDS KH Q+YAGFM +LY +GIPV Y+ILLFR+R+VL K+ + RN +R+ STS LW+PY
Sbjct: 1268 CDELEDGNY-LRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKADRNDSARVKSTSELWQPY 1346
BLAST of mRNA_F-serratus_M_contig1496.3412.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI) HSP 1 Score: 107 bits (267), Expect = 2.410e-25 Identity = 48/80 (60.00%), Postives = 60/80 (75.00%), Query Frame = 1
Query: 1 CEHLEDGKYYLRADYRIECDSGKHINLQIYAGFMAMLYTVGIPVFYAILLFRNRDVLVKNDSCRNRCSRISSTSSLWRPY 240
CE L DG+ YLRADYRI CDS KH LQ+YAG M ++YTVGIP Y +LLFR+RDVL ++ + R +R+ STS LW+PY
Sbjct: 1848 CESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPY 1927
BLAST of mRNA_F-serratus_M_contig1496.3412.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI) HSP 1 Score: 105 bits (261), Expect = 1.550e-24 Identity = 50/80 (62.50%), Postives = 58/80 (72.50%), Query Frame = 1
Query: 1 CEHLEDGKYYLRADYRIECDSGKHINLQIYAGFMAMLYTVGIPVFYAILLFRNRDVLVKNDSCRNRCSRISSTSSLWRPY 240
CE L DGK YLR+DYRIECDS H Q+YAGFM +LY VGIP YA LLFR+RDVL K++ R R++STS LW PY
Sbjct: 1011 CEELHDGKNYLRSDYRIECDSSGHKAFQVYAGFMIVLYPVGIPALYAGLLFRDRDVLRKDEINREDPPRVTSTSHLWEPY 1090
BLAST of mRNA_F-serratus_M_contig1496.3412.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI) HSP 1 Score: 104 bits (260), Expect = 2.140e-24 Identity = 48/80 (60.00%), Postives = 58/80 (72.50%), Query Frame = 1
Query: 1 CEHLEDGKYYLRADYRIECDSGKHINLQIYAGFMAMLYTVGIPVFYAILLFRNRDVLVKNDSCRNRCSRISSTSSLWRPY 240
C+ LE G YLRADYRIECDS KH ++YAGFM +LY VGIP FY LLFR+RDVL K+ R R++S S+LW+PY
Sbjct: 2536 CDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLFRDRDVLEKDPDGREDPPRVASISNLWQPY 2615
BLAST of mRNA_F-serratus_M_contig1496.3412.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 104 bits (259), Expect = 2.870e-24 Identity = 47/80 (58.75%), Postives = 60/80 (75.00%), Query Frame = 1
Query: 1 CEHLEDGKYYLRADYRIECDSGKHINLQIYAGFMAMLYTVGIPVFYAILLFRNRDVLVKNDSCRNRCSRISSTSSLWRPY 240
CE L+D K YLRADYRIECDS KH Q+YAGFM +LYTVGIP Y LFR+ DVL ++++ R + +RI+ T+ LW+PY
Sbjct: 758 CEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPY 837
BLAST of mRNA_F-serratus_M_contig1496.3412.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 104 bits (259), Expect = 2.900e-24 Identity = 49/81 (60.49%), Postives = 60/81 (74.07%), Query Frame = 1
Query: 1 CEHLEDGKYYLRADYRIECDSGKHINLQIYAGFMAMLYTVGIPVFYAILLFRNRDVLVKNDSC-RNRCSRISSTSSLWRPY 240
CE LEDGK YL ADYRIECDS KH ++YAGFM +LYT GIP Y+ LLFR+RDVL ++ ++ SR +STS LW+PY
Sbjct: 1392 CETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPY 1472
BLAST of mRNA_F-serratus_M_contig1496.3412.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 103 bits (258), Expect = 3.940e-24 Identity = 47/80 (58.75%), Postives = 58/80 (72.50%), Query Frame = 1
Query: 1 CEHLEDGKYYLRADYRIECDSGKHINLQIYAGFMAMLYTVGIPVFYAILLFRNRDVLVKNDSCRNRCSRISSTSSLWRPY 240
CE LEDG YLRADY I+CDS KH Q+YAGFM ++Y VGIP YA LLFR+R VL + + R + +R +STS LW+PY
Sbjct: 1037 CEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPY 1116
BLAST of mRNA_F-serratus_M_contig1496.3412.1 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI) HSP 1 Score: 103 bits (257), Expect = 5.380e-24 Identity = 47/81 (58.02%), Postives = 60/81 (74.07%), Query Frame = 1
Query: 1 CEHLEDGKYYLRADYRIECDSGKHINLQIYAGFMAMLYTVGIPVFYAILLFRNRDVLVKNDSCRNRC-SRISSTSSLWRPY 240
CE L DGK YLRADYRIECDS +H ++YAG M ++YTVGIP Y LL+R+RD L + D+C+ SR++STS LW+PY
Sbjct: 1202 CETLGDGKNYLRADYRIECDSSRHKGFEVYAGIMMLVYTVGIPGLYGFLLYRDRDFLKERDTCQEPPPSRVTSTSDLWKPY 1282
BLAST of mRNA_F-serratus_M_contig1496.3412.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 102 bits (254), Expect = 1.360e-23 Identity = 47/80 (58.75%), Postives = 57/80 (71.25%), Query Frame = 1
Query: 1 CEHLEDGKYYLRADYRIECDSGKHINLQIYAGFMAMLYTVGIPVFYAILLFRNRDVLVKNDSCRNRCSRISSTSSLWRPY 240
C+ LE G YLRADYRIECDS KH ++YAGFM +LY VGIP FY LL R+RDVL K+ R R++S S+LW+PY
Sbjct: 798 CDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPY 877 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1496.3412.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1496.3412.1 >prot_F-serratus_M_contig1496.3412.1 ID=prot_F-serratus_M_contig1496.3412.1|Name=mRNA_F-serratus_M_contig1496.3412.1|organism=Fucus serratus male|type=polypeptide|length=80bp CEHLEDGKYYLRADYRIECDSGKHINLQIYAGFMAMLYTVGIPVFYAILLback to top mRNA from alignment at F-serratus_M_contig1496:181772..182012+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1496.3412.1 ID=mRNA_F-serratus_M_contig1496.3412.1|Name=mRNA_F-serratus_M_contig1496.3412.1|organism=Fucus serratus male|type=mRNA|length=241bp|location=Sequence derived from alignment at F-serratus_M_contig1496:181772..182012+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1496:181772..182012+ >mRNA_F-serratus_M_contig1496.3412.1 ID=mRNA_F-serratus_M_contig1496.3412.1|Name=mRNA_F-serratus_M_contig1496.3412.1|organism=Fucus serratus male|type=CDS|length=480bp|location=Sequence derived from alignment at F-serratus_M_contig1496:181772..182012+ (Fucus serratus male)back to top |