mRNA_F-serratus_M_contig1490.3377.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1490.3377.1
Unique NamemRNA_F-serratus_M_contig1490.3377.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1490.3377.1 vs. uniprot
Match: A0A6H5L8Y3_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8Y3_9PHAE)

HSP 1 Score: 445 bits (1145), Expect = 1.090e-141
Identity = 335/834 (40.17%), Postives = 439/834 (52.64%), Query Frame = 2
Query:   41 VPGLMASLLANLLVNVTRGRHDLSVESAAGASDQGREDTHDQEHTKLCVESSRNASRKARVLSSYRHVLLRWAAITATG------SHASTTASSSRNTQGRPTTTPHRGRTVASNTKGAADIHGTSPITPPAFFRSDLLSLKFAGDVGRHLVA---RAAGV-SAGTLLLKEHPYAWCLQPKLAGQLCAHCLHEVRIGTAPCSICGLEAFCSSACAANAQRTWHGAECLDAYG-KPLEPALLSLSPECRVALRAVRRFMREETAEPP----------ITATSAVARRSCNPPPGTPFSSKRCG--------KLVMGFGDLQGHYAARSSRQNDFLEAEAAIASVLVAGDGTESE-ENDSRGHEPGDPPVE----ESPETLAAKLISALVKVSTNAFAVSTLRSAEPAFGH-VRAINHTRVAIGLYCTAALLNHSCVPNALATFDGGEMRIVATRAIEMGETVTISYGPLASKASLVSSTAERRSLLRSTYFFHCGCPACNQENDSVDVTINKTYAG---GSNLQL-------QAMAP--SKITEFGCVES---GCDGTLLLG------------------QGQI--------LPT-------AQVSERQSSPS------LLLCCDRCGARLSRRLASALMEEDKEDRRLWAEVLSVIARLEEQVRMEDG-------------WGRMSDKERGGNFKTSSTAVVTSSGETAAETATAAKGLIVQRARWRDHRLCPASMRRATAHDAHARLLATEGDFSSAADACARALQVLTRRFAPEDRELGIEYLKLAELCFNAGLVERCLVACQHARVSLDVFLTSNDEQMLSLRNMQSLCAA 2236
            + G   S LANLLV+     H               +DT D  H KL   +   A RKARVLS +  VL RW A  ATG       H      S+ ++   P  +  R      +    AD   +  +       S LLSL     VGRH+VA     AGV  AGT+LL+E P+AW L P+  G+ CAHCL EVR     C  C   AFC   C+  A + WHG+EC+DA    PLEPAL  +SP C VALRA +R  R+    P           +  T    + +C    G   SS   G        K+ +G  +LQ HYAARS+R+ D LE EAA+ +VL  G G++ + + DS G             E+ E +AA+L + LVKVSTNAF +S+LR ++   GH VR + H  VA+GLY  A+++NHSC PNALA+F GGEMR+VATRAIE GE VTISYGPLASK   +SST+ER++ L   YFF C C AC+  ++    T ++   G   G   QL       +A+    SK T+F C E+   GC GTL +G                  QG I        +P+       A  S   +SPS      ++L CDRCG+R+   LA AL++EDKEDRRLW E  + ++  E+      G               R +  ER     T+    V ++    +  ++ A  L+++R RWRD  L   SMRRA AHD HAR+LA+  DF  AADACARA+ VL RRF+PED+ELGIE+LKLAELCFNAG  ++C  AC  A+ SL V L   DEQ+ +L  +Q+LCAA
Sbjct:    1 MAGSSVSALANLLVSAASVEHG--------------DDTEDT-HEKLREATRNGAKRKARVLSKHHAVLARWTASPATGVNPRRQQHNGANGCSTGDSPAAPRYSGTRSSEDIPHVDAVADR--SEEVRVQNNIVSPLLSLASTDSVGRHVVAGGGSGAGVIPAGTVLLRETPFAWSLHPEFNGEFCAHCLCEVRGPVTLCPECRRVAFCGRGCSTAALQEWHGSECVDASSCTPLEPALSGVSPTCMVALRAYKRARRQGGQLPKRTDSGQGDAGVAVTVTETQGACQNRFGNIASSPPRGGGEDVAWPKVKLG--NLQEHYAARSARERDLLETEAAVTAVLANGFGSDIDLDADSLGRSGSGRCATRTSTEACELVAAELATTLVKVSTNAFTISSLRCSDSRAGHNVRPLKHATVAVGLYLVASMINHSCRPNALASFHGGEMRVVATRAIERGEPVTISYGPLASK---MSSTSERQAYLSRAYFFRCECIACHPLSEETATTPSRRSRGSEGGDERQLTDRDKEGKAIEATFSKRTDFACTEAESGGCPGTLCVGVPPXXXXXXXXXXXXSTTQGCINSGVESSNVPSPCINRVQAVASTSSTSPSPRRMEVVVLWCDRCGSRVPPDLADALLKEDKEDRRLWEEAKAAMSSSEKGAGRSGGDDDGELKSMSPPRRSRPNTGERWCKSSTTEDGSVNAAPSPGSFASSDALSLVMERIRWRDRYLTTTSMRRAVAHDMHARVLASREDFPGAADACARAVSVLKRRFSPEDQELGIEFLKLAELCFNAGWTDKCTAACVKAKESLGVCLQPGDEQLEALNTLQALCAA 812          
BLAST of mRNA_F-serratus_M_contig1490.3377.1 vs. uniprot
Match: D7FV15_ECTSI (Set and mynd domain containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV15_ECTSI)

HSP 1 Score: 333 bits (853), Expect = 2.790e-101
Identity = 238/584 (40.75%), Postives = 315/584 (53.94%), Query Frame = 2
Query:  752 VALRAVRRFMREETAEPP----------ITATSAVARRSCNPPPGTPFSSKRCGK------LVMGFGDLQGHYAARSSRQNDFLEAEAAIASVLVAGDGTESE-----ENDSRGHEPGDPPVEESPETLAAKLISALVKVSTNAFAVSTLRSAEPAFGH-VRAINHTRVAIGLYCTAALLNHSCVPNALATFDGGEMRIVATRAIEMGETVTISYGPLASKASLVSSTAERRSLLRSTYFFHCGCPACNQENDSVDVTIN---KTYAGGSNLQLQAMAP---------SKITEFGCVES---GCDGTLLLG------------------QGQILPTAQVSERQS---------------SPS------LLLCCDRCGARLSRRLASALMEEDKEDRRLWAEVLSVIARLEEQVRM----EDGW---------GRMSDKERGGNFKTSSTAVVTSSGETAAETATAAKGLIVQRARWRDHRLCPASMRRATAHDAHARLLATEGDFSSAADACARALQVLTRRFAPEDRELGIEYLKLAELCFNAGLVERCLVACQHARVSLDVFLTSNDEQMLSLRNMQSLCAA 2236
            VALRA +R  R+    P           +  T    R +C+   G+  SS   G         +  G+LQ HYAARS+R+ D LE EAA+ +VL +G G+ ++                    E+ E +AA+L + LVKVSTNAF VS+LR ++P  GH VR + H  VA+GLY  A+++NHSC PNALA+F GGEMR+VATRAIE GE VTISYGPLASK   +SS +ER++ L   YFF C C AC+   +    T +   +   GG   QL              SK T+F C E+    C GTL +G                  QG ++  A+ S   S               SPS      ++L CDRCG+R+   LA AL++EDKEDRRLW E  + ++  E++       +DG           R +  ER     T+    V ++    +  ++    L+V+R RWRD  L   SMRRA AHD HAR+LA+  DF  AADACARA+ VL RRF+PED+ELGIE+LKLAELCFNAG  ++C  AC  AR SL V L   DEQ+ +L  +Q+LCAA
Sbjct:    2 VALRAYKRARRQGGPLPKRTGSGKGGADVAVTVTETRGACHDRFGSVASSPPRGGGDDVAWPNVKLGNLQEHYAARSARERDLLETEAAVTAVLASGFGSGTDLXXXXXXXXXXXXXATRTSTEACELVAAELATTLVKVSTNAFTVSSLRCSDPPAGHNVRPLKHATVAVGLYLVASMMNHSCRPNALASFHGGEMRVVATRAIERGEPVTISYGPLASK---ISSASERQAYLSRAYFFRCECIACHPPPEETATTPSGRSRGSEGGDERQLTDREKEGRATEATFSKRTDFACTEAESGACPGTLRVGVSPXXXXXXXXXXXXSTTQGCLISGAESSNVPSPCFNRVQAVASLSSTSPSPRRMEVVVLWCDRCGSRVPPDLADALLKEDKEDRRLWEEAKAAMSSSEKEAGRCGGGDDGELKSMPPPRRSRPNTGERSCKSSTTEDGSVNAAPFPGSSASSDTLSLVVERIRWRDRYLTTTSMRRAVAHDMHARVLASREDFPGAADACARAVSVLKRRFSPEDQELGIEFLKLAELCFNAGWTDKCTAACVKARESLGVCLQPGDEQLEALNTLQALCAA 582          
BLAST of mRNA_F-serratus_M_contig1490.3377.1 vs. uniprot
Match: A0A139APV2_GONPJ (Uncharacterized protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139APV2_GONPJ)

HSP 1 Score: 102 bits (253), Expect = 1.330e-18
Identity = 97/335 (28.96%), Postives = 146/335 (43.58%), Query Frame = 2
Query:  464 GRHLVARAAGVSAGTLLLKEHPYAWCLQPKLAGQLCAHCLHEVRIGTAPCSICGLEAFCSSACAANAQRTWHGAECLDAYGKPLEPALLSLSP-ECRVALRAVRRFMREETAEPPITATSAVARRSCNPPPGTPFSSKRCGKLVMGFGDLQGHYAARSS---RQNDFLEAEAAIASVLVAGDGTESEENDSRGHEPGDPPVEESPETLAAKLISALVKVSTNAFAVS-TLRSAEPAFGHVRAINHTR-VAIGLYCTAALLNHSCVPNALATF-DGGEMRIVATRAIEMGETVTISYGPLASKASLVSSTAERRSLLRSTYFFHCGCPACNQENDS 1447
            GR L++    +S    +L+E PYA           C++CLH++ +   PC +C  E +C   C   A   WH  EC  A G     A L ++P   R+ LR   R+  E +      A +  +     P         +   L  G  +L     A SS      D L  E+A+A+ +VA    E      R      PP E +  +    L  ++++   N  AV   +R+ E   G   A  + R V   +Y   ++ NHSCVPNA+ATF DG  + +   + ++ G  VTISYGP  ++   + S   RR +L+  + F C C AC  E  S
Sbjct:  257 GRGLISTKP-LSPPLAILEEPPYA----ALSVSDTCSYCLHDLPLNPIPCKLCSSEMYCGGPCQVAAWEAWHHVECELAVGGLGVSAFLRVAPPHVRLGLRGFWRWRAEMSHGEKAPAPTDDSALDLTP---------QWTSLWTGLSELVSQLNAASSLDLNHPDLL-FESALAAAVVAEISPEPLLEPHR-----QPPHESAAASAEIALTMSMLRALRNTMAVKRVVRTQE---GESSADEYERHVGSAVYLFGSMANHSCVPNAVATFVDGANLTLRLVKPVQSGSEVTISYGPTDTR---IPSREVRRQILQDKWDFCCRCGACETERSS 565          
BLAST of mRNA_F-serratus_M_contig1490.3377.1 vs. uniprot
Match: UPI001EE51469 (SET and MYND domain-containing protein 4-like isoform X1 n=2 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE51469)

HSP 1 Score: 90.9 bits (224), Expect = 3.890e-15
Identity = 91/344 (26.45%), Postives = 148/344 (43.02%), Query Frame = 2
Query:  437 LSLKFAGDVGRHLVARAAGVSAGTLLLKEHPYAWCLQPKLAGQLCAHCLHEVRIGTAPCSICGLEAFCSSACAANAQRTWHGAEC-----LDAYGKPLEPALLSLSPECRVALRAVRRFMREETAEPPITATSAVARRSCNPPPGTPFSSKRCGKLVMGFGDLQGHYAARSSRQNDFLEAEAAIASVLVAGDGTESEENDSRGHEPGDPPVEESPETLAAKLISALVKVSTNAFAVSTLRSAEPAFGH-VRAINHTRVAIGLYCTAALLNHSCVPNALATFDGGEMRIVATRAIEMGETVTISYGPLASKASLVSSTAERRSLLRSTYFFHCGCPACNQENDSV 1450
            + +K     GRHLVA+ A + AG  L+ E PYA  L        C +C   + +   PC  C +  +CS  C   A   +H  EC     L + G     A LSL    R+ L A  +F+   + +      S +   +  P     + +     L+    D++     + S     L         L  G   E E  D+                + + L+  ++++  NA A+S L+ ++ A  + V + +  RVA  +Y TA+L+NHSC P  +A+F    + + + + + +G+ +   YGP   + SL     +R+  L S YFFHC C AC QE  S+
Sbjct:  239 VEMKHTCSKGRHLVAKQA-IPAGATLIVERPYAAVLLQDHLHSHCHNCFQTLSLAPIPCMECCVMLYCSVECRDTAWTMYHNIECQYQDLLSSVGI----AHLSL----RIILTAGLQFLLAFSDQ---DRDSVIRGLTVGPKYQRDYLAVH--DLLTHEQDMEAEDLFQYSLTAYLLLRVLIDVGWLPDGASLEDELTDNMM-------------CIGSFLLRHILQLVCNAHAISELQVSQVADSNLVDSKSQVRVATAIYPTASLINHSCDPTIIASFQRDTLVVRSVKDVAVGQEIFNCYGPHCKRMSLT----DRQQALSSQYFFHCQCQACVQEEQSI 551          
BLAST of mRNA_F-serratus_M_contig1490.3377.1 vs. uniprot
Match: UPI00201F7493 (SET and MYND domain-containing protein 4-like isoform X1 n=4 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F7493)

HSP 1 Score: 87.0 bits (214), Expect = 6.200e-14
Identity = 95/378 (25.13%), Postives = 150/378 (39.68%), Query Frame = 2
Query:  383 DIHGTSPITPPAFFR---------SDLLSLKFAGDVGRHLVARAAGVSAGTLLLKEHPYAWCLQPKLAGQLCAHCLHEVRIGTAPCSICGLEAFCSSACAANAQRTWHGAECLDAYGKPLEPALLSLSPECRVALRAVRRFMREETAEPPITATSAVARRSCNPPPGTPFSSKRCGKLVMGFGDLQGHYAARSSRQNDFLEAEAA---------IASVLVAGDGTESEENDSRGHEPGDPPVEESPETL---AAKLISALVKVSTNAFAVSTLRSAEPAFGH-VRAINHTRVAIGLYCTAALLNHSCVPNALATFDGGEMRIVATRAIEMGETVTISYGPLASKASLVSSTAERRSLLRSTYFFHCGCPACNQENDSV 1450
            D  G S I  P  F+         S  + +K     GRH VA+ A + AG  L+ E PYA  L        C HC   + +   PC  C +  +CS  C   A   +H  EC           LLS      ++LR +            +T           P   +       G+      D    Y   +  Q+  +EAE           +  VLV          D+     G P  ++  + +    + L+  ++++  NA A++ L+ ++ A    V + +  RVA  +Y TA+L+NHSC P  +++F G  + + A + +  G+ +   YGP   +        ER+  L S YFFHC C AC ++  SV
Sbjct:  212 DTDGESEIQLPQLFQGASEVITQASTAMEMKHTCSQGRHFVAKQA-IPAGATLIVERPYAAVLLRDHHHSNCHHCFKVLSLAPTPCMECCVVLYCSVECRDTAWTMYHSTECQ-------YQDLLSSVGIAHLSLRII------------LTTGLKFLLAFSTPDRDSVIRGLTGGQKYQR--DYHAMYDLLTHEQD--IEAEDLFQYSLTAYLLIRVLV----------DAGWFPHGAPRADQLTDNMMCIGSCLLRHILQLVCNAHAITELQVSQVADSDLVDSKSQVRVATAIYPTASLMNHSCDPTIISSFQGDMLVVRAVKDVAAGQEIFSCYGPHCKRMC----RGERQQALSSQYFFHCQCQACVEDQPSV 551          
BLAST of mRNA_F-serratus_M_contig1490.3377.1 vs. uniprot
Match: A0A2G8L8R3_STIJA (SET and MYND domain-containing protein 4 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8L8R3_STIJA)

HSP 1 Score: 84.0 bits (206), Expect = 4.690e-13
Identity = 98/362 (27.07%), Postives = 159/362 (43.92%), Query Frame = 2
Query:  371 KGAADIHGTSPITPPAFFRSDLLSLKFAGDVGRHLVARAAGVSAGTLLLKEHPYAWCLQPKLAGQLCAHCLHEVRIGTAPCSICGLEAFCSSACAANAQRTWHGAECLDAYGKPLEPALLSLSPECRVALRAVRRF-MREETAEPPITATSAVARRSCNPPPGTPFSSKRCGKLVMGFG---DLQGHYAARSSRQNDFLEAEAAIASVLVAGDGTESEENDSRGHEPGDPPVEESPETLAAKLISA-LVKVSTNAFAVSTLRS---AEPAFGHVRAINHTRVAIGLYCTAALLNHSCVPNALATFDGGEMRIVATRAIEMGETVTISYGPLASKASLVSSTAERRSLLRSTYFFHCGCPACN 1432
            K  A   G  P  P     S  +SL+++ + GR+LVA    + AG +++ E P+A  L P      C +C     +    CS C    +CS  C   A   +H  EC      P+   L  +     + +R +    + +ET    I++ S     + N  PG     +  G     +G    LQ H     +++N F   +A++  +L++         D+  H   D    ++     A LIS  ++++  N  A++ +     A+     V      RVA  +Y T +L+NH C PN +A+F+G ++ I ATR I+ GE +  SYGP  +   +    AER   L+  YFF C C AC+
Sbjct:  118 KATASSCGFDP-HPSIANASRQISLQYSTEKGRYLVAETV-IQAGDVIISEKPFAVVLLPDHYDTHCHYCCDRA-LAPVMCSHCIHVQYCSEVCKDAAWEDYHEVEC------PMWEVLQEIDSLGHLGVRIILSAGIHKETM---ISSFSKSLPTTSNGIPGC----RADGIYQADYGAVYSLQTHID-NQTQENLF---QASMTGLLLSICVHIRLGKDNSVH--WDALCNDTEVCALAGLISRHILQLRCNVHAITAVHPQGHADDPGRKVETTEQVRVASAVYPTVSLMNHGCDPNVIASFNGSDVTIRATRNIKNGEEICHSYGPHKNHMPV----AERLRKLKEQYFFDCTCSACH 453          
BLAST of mRNA_F-serratus_M_contig1490.3377.1 vs. uniprot
Match: UPI0007380FA8 (SET and MYND domain-containing protein 4 n=1 Tax=Diachasma alloeum TaxID=454923 RepID=UPI0007380FA8)

HSP 1 Score: 82.0 bits (201), Expect = 2.090e-12
Identity = 108/404 (26.73%), Postives = 161/404 (39.85%), Query Frame = 2
Query:  455 GDVGRHLVARAAGVSAGTLLLKEHPYAWCLQPKLAGQLCAHCLHE-VRIGTAPCSICGLEAFCSSACAANAQRTWHGAECLDAYGKPLEPALLS-LSPECRVALRAV--RRFMREETAEPPITATSAVARRSCNPPPGTPFSSKRCGKLVMGFGDLQGHYAARSSRQNDFLEAEAAIASVLVAGDGTESEENDSRGHEPGDPPVEESPETLAAKLISALVKVSTNAFAVSTLRSAEPAFGHVRAINHTRVAIGLYCTAALLNHSCVPNALATFDGGEMRIVATRAIEMGETVTISYGPLASKASLVSSTAERRSLLRSTYFFHCGCPACNQENDSVDVTINKTYAGGSNLQLQAMAPSKITEFGCVESGCDGTLLLGQGQILPTAQVSERQSSPSLLLCCDRCG 1654
            GD+GRH +A    +  G +++ E P+   +  +     C +C  + +    A C  C L A+CS  C  +A    H +EC       L P  LS  S  C +A++AV  R + +    +  I  +      S +     PF     G   M F  +  H + R+  + D        A +L     +     D +  +  +  + E    L   L+  L  +  N   +S L          RA ++  +A GL+CT ALLNHSC P  +  F+G  M + A R I  G+ +  +YGP+ +    V   A R+  LR  Y+F CGC AC               AG   L LQ M P KI  F C      G +L            S        +L C +CG
Sbjct:  249 GDIGRHGIA-TRDIMPGEVIIIEKPHCAVVLGEYRLANCHYCFKKNIAPFAAACDTCALVAYCSGKCR-DADAKTHASEC-----SILGPLWLSNASITCLLAIKAVIQRPYAKFRKLKDEIENSDKKFHASKD----HPFR----GSDYMAFQSMVTHESERT--EEDLFHRAYMAAWLLRVLKKSAYLPEDLKTPDLAEYTLTEDESFLGGLLLHHLQLLQFNTHEISELVRPRNDKTLQRAKSNF-IAGGLFCTPALLNHSCNPGVVRYFEGMTMVVRAVRTIRAGDEICDNYGPIFT----VEPKANRQRKLRMEYWFDCGCEAC---------------AGNWPL-LQDMNP-KILRFKCETGPSCGNVL------------SVNVDINEFMLNCSKCG 601          
BLAST of mRNA_F-serratus_M_contig1490.3377.1 vs. uniprot
Match: A0A443QV89_9ACAR (SET and MYND domain-containing protein (SMYD)-like protein n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A443QV89_9ACAR)

HSP 1 Score: 82.0 bits (201), Expect = 2.370e-12
Identity = 88/337 (26.11%), Postives = 140/337 (41.54%), Query Frame = 2
Query:  428 SDLLSLKFAGDVGRHLVARAAGVSAGTLLLKEHPYAWCLQPKLAGQLCAHCLHEVRIGTAPCSICGLEAFCSSACAANAQRTWHGAECLDAYGKPLEPALLSLSPECRVALRAVRRFMREETAEPPITATSAVARRSCNPPPGTPFSSKRCGKLVMGFGDLQGHYAARSSRQNDFLEAEAAIASVLVAGDGTESEENDSRGHEPGDPPVEESPETLAAKLISALVKVSTNAFAVSTLRSAEPAFGHVRAINHTRVAIG--LYCTAALLNHSCVPNALATFDGGEMRIVATRAIEMGETVTISYGPLASKASLVSSTAERRSLLRSTYFFHCGCPACN 1432
            +  + L  +   GR+L      V     +L E P+A  L  +     C +C  E+     PC  C    FCS  C   A +++H  EC            +SL     V   A+R  +     +  I A   +  +S N      + S     L+    ++    +AR +    F     ++   L+       +END   +             + A ++  + +VS N+  V   +   P    +  I+     IG  +Y T +L+NHSCVPN  A F+G  + + A ++I +GE +TISYGPL  K S +    ER + L+S Y+F C C ACN
Sbjct:  261 NSFVKLNHSEAKGRYLTVTKR-VDLDEAILAEKPFAAILNIQCIDHFCHNCCQELNEALFPCKNCCEVQFCSETCYEEAMQSYHALECES----------ISLIQSTGVVRLALRILLTAGIDKARIVAKENI-EKSGNQKHLRDYKSLL--SLIDHSDNVPFVVSARQTLAACFYLVLLSLKMSLI-------QENDKDFY------------FIGALILKHIQQVSCNSM-VMFHQPLIPGPMDIIGIDVKNQVIGTAIYSTLSLVNHSCVPNCDAFFNGSFIVLKARQSIAVGEEITISYGPLYRKMSRI----ERLATLKSQYYFGCECTACN 559          
BLAST of mRNA_F-serratus_M_contig1490.3377.1 vs. uniprot
Match: A0A210Q399_MIZYE (SET and MYND domain-containing protein 4 n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210Q399_MIZYE)

HSP 1 Score: 81.6 bits (200), Expect = 3.020e-12
Identity = 94/360 (26.11%), Postives = 149/360 (41.39%), Query Frame = 2
Query:  389 HGTSPITPPAFFRSDLLSLKFAGDVGRHLVARAAGVSAGTLLLKEHPYAWCLQPKLAGQLCAHCLHEVRIGTAPCSICGLEAFCSSACAANAQRTWHGAECLDAYGKPLEP---ALLSLSPECRVALRAVRRFMR-----EETAEPPITATSAVARRSCNPPPGTPFSSKRCGKLVMGFGDLQGHYAARSSRQNDFLEAEAAIASVL----VAGDGTESEENDSRGHEPGDPPVEESPETLAAKLISALVKVSTNAFAVSTLRSAEPAFGH-VRAINHTRVAIGLYCTAALLNHSCVPNALATFDGGEMRIVATRAIEMGETVTISYGPLASKASLVSSTAERRSLLRSTYFFHCGCPAC 1429
            +G +P+   A   +  L ++   + GRHLVA    + AG  L+ E P+A  L P      C HC  ++     PC  C    +CS  C   +  ++H  ECL  Y   L     A L +       L+ V  F +     EE  +  I     V+        GT       G+  +   DL  H  ++    +D  +       +L    V+G  +    N       G   V E    +   L+  + ++  NA A++ L+  +      V   +  RVA  +Y TA+L+NHSC P  +++FD   + + A R ++ G  +   YGP   + S     A+RR +L+  YFF C C AC
Sbjct:  228 YGRNPVVTQA---TSALKMEHTTEKGRHLVATRE-LRAGDTLIVEKPFAAVLLPDHYASHCHHCFGQLDTVVIPCVRCTQVRYCSKDCRDVSWSSYHNIECL--YLDLLHSVGIAHLGVRIVLVAGLQFVLEFKKTLQSLEEQKKSGILRIGGVSED------GT------YGRGYLTVYDLMPH--SQHLVIDDLFQYSLTACLLLNILQVSGWFSSGPGNGDTAVSGGARDVSEVERYVGGLLLRHIQQLVCNAHAITELQVTQATDQSLVDTKSQVRVATAIYPTASLMNHSCDPTIISSFDRDSLVVRAVRDVKEGMEIYNCYGPHHKRMS----GADRRQILKEQYFFDCQCNAC 563          
BLAST of mRNA_F-serratus_M_contig1490.3377.1 vs. uniprot
Match: A0A8J1UCF5_OWEFU (SET and MYND domain-containing protein 4 n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UCF5_OWEFU)

HSP 1 Score: 80.5 bits (197), Expect = 6.760e-12
Identity = 97/354 (27.40%), Postives = 146/354 (41.24%), Query Frame = 2
Query:  428 SDLLSLKFAGDVGRHLVARAAGVSAGTLLLKEHPYAWCLQPKLAGQLCAHCLHEVRIGTAPCSICGLEAFCSSACAANAQRTWHGAEC--LDAYGKPLEPALLSLSPECRVALRAVRRFMREETAEPPITATSAVARRSCNPPPGTPFSSKRCGKLVMGFGDLQGH-----------YAARSSRQNDFLEAEA---AIASVLVAGDGTESEENDSRGHEPGDPPVEESPET-LAAKLISALVKVSTNAFAVSTLRSAEPAFGHVRAINHT---RVAIGLYCTAALLNHSCVPNALATFDGGEMRIVATRAIEMGETVTISYGPLASKASLVSSTAERRSLLRSTYFFHCGCPAC 1429
            S  +++K     GR LVA    + AG  L+ E P+   L P      C HC  ++     PC  C    +CS  C A +  T+H  EC  LD         LL       +ALR V     E   +   + ++A   +S         SS   G        L  H           Y   ++    +LE  +    I S + +  G +S+ N      P  P  E+   T +   L+  + ++  NA A++ L     A G  R +  T   RVA  +Y TA+L+NHSC+PN +++F+   + + A   +  G  +   YGP A++  L     ER+  LR  YFF C C AC
Sbjct:  206 SAAINVKVNKQQGRFLVANQ-DIKAGDTLIVEKPFTAVLLPDHYDNHCHHCFVKLT-APLPCHQCIEVKYCSEVCRAQSWSTYHNIECGYLD---------LLHSIGVAHLALRTVLVAGLETLLDHRSSLSTAPIGQSI----AGADSSGWYGNTYTAVYHLMPHEEDMLIEDMFQYTLTAALLLKYLEQTSFFHPITSAIQSEAGDQSQPNG-----PMKPLTEKEAVTYIGGLLLRHIQQLVCNAHAITEL----DAGGDNRVVMTTSQVRVATAIYPTASLMNHSCIPNIISSFNKDTLVVCAVEDVPAGGEIFNCYGPHANRMDL----RERQEALRIQYFFDCTCQAC 531          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1490.3377.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L8Y3_9PHAE1.090e-14140.17SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FV15_ECTSI2.790e-10140.75Set and mynd domain containing protein, putative n... [more]
A0A139APV2_GONPJ1.330e-1828.96Uncharacterized protein n=1 Tax=Gonapodya prolifer... [more]
UPI001EE514693.890e-1526.45SET and MYND domain-containing protein 4-like isof... [more]
UPI00201F74936.200e-1425.13SET and MYND domain-containing protein 4-like isof... [more]
A0A2G8L8R3_STIJA4.690e-1327.07SET and MYND domain-containing protein 4 n=1 Tax=S... [more]
UPI0007380FA82.090e-1226.73SET and MYND domain-containing protein 4 n=1 Tax=D... [more]
A0A443QV89_9ACAR2.370e-1226.11SET and MYND domain-containing protein (SMYD)-like... [more]
A0A210Q399_MIZYE3.020e-1226.11SET and MYND domain-containing protein 4 n=1 Tax=M... [more]
A0A8J1UCF5_OWEFU6.760e-1227.40SET and MYND domain-containing protein 4 n=1 Tax=O... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1490contigF-serratus_M_contig1490:197886..204511 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score341.7
Seed ortholog evalue8.8e-91
Seed eggNOG ortholog2880.D7FV15
Hectar predicted targeting categoryother localisation
EggNOG free text desc.SET domain
EggNOG OGsCOG2940@1,KOG2084@2759
Ec32 ortholog descriptionMYND zinc finger and SET domain protein
Ec32 orthologEc-14_003800.1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size2260
Cds size2208
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1490.3377.1prot_F-serratus_M_contig1490.3377.1Fucus serratus malepolypeptideF-serratus_M_contig1490 197938..204511 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929468.44516-UTR-F-serratus_M_contig1490:197885..1979371622929468.44516-UTR-F-serratus_M_contig1490:197885..197937Fucus serratus maleUTRF-serratus_M_contig1490 197886..197937 +
1690962866.9499354-UTR-F-serratus_M_contig1490:197885..1979371690962866.9499354-UTR-F-serratus_M_contig1490:197885..197937Fucus serratus maleUTRF-serratus_M_contig1490 197886..197937 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929468.4841013-CDS-F-serratus_M_contig1490:197937..1980221622929468.4841013-CDS-F-serratus_M_contig1490:197937..198022Fucus serratus maleCDSF-serratus_M_contig1490 197938..198022 +
1690962866.9626231-CDS-F-serratus_M_contig1490:197937..1980221690962866.9626231-CDS-F-serratus_M_contig1490:197937..198022Fucus serratus maleCDSF-serratus_M_contig1490 197938..198022 +
1622929468.4998016-CDS-F-serratus_M_contig1490:200735..2011941622929468.4998016-CDS-F-serratus_M_contig1490:200735..201194Fucus serratus maleCDSF-serratus_M_contig1490 200736..201194 +
1690962866.9715497-CDS-F-serratus_M_contig1490:200735..2011941690962866.9715497-CDS-F-serratus_M_contig1490:200735..201194Fucus serratus maleCDSF-serratus_M_contig1490 200736..201194 +
1622929468.5144668-CDS-F-serratus_M_contig1490:201540..2020491622929468.5144668-CDS-F-serratus_M_contig1490:201540..202049Fucus serratus maleCDSF-serratus_M_contig1490 201541..202049 +
1690962866.9807258-CDS-F-serratus_M_contig1490:201540..2020491690962866.9807258-CDS-F-serratus_M_contig1490:201540..202049Fucus serratus maleCDSF-serratus_M_contig1490 201541..202049 +
1622929468.5304816-CDS-F-serratus_M_contig1490:202268..2025201622929468.5304816-CDS-F-serratus_M_contig1490:202268..202520Fucus serratus maleCDSF-serratus_M_contig1490 202269..202520 +
1690962866.9901319-CDS-F-serratus_M_contig1490:202268..2025201690962866.9901319-CDS-F-serratus_M_contig1490:202268..202520Fucus serratus maleCDSF-serratus_M_contig1490 202269..202520 +
1622929468.5437694-CDS-F-serratus_M_contig1490:203608..2045111622929468.5437694-CDS-F-serratus_M_contig1490:203608..204511Fucus serratus maleCDSF-serratus_M_contig1490 203609..204511 +
1690962866.9994452-CDS-F-serratus_M_contig1490:203608..2045111690962866.9994452-CDS-F-serratus_M_contig1490:203608..204511Fucus serratus maleCDSF-serratus_M_contig1490 203609..204511 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1490.3377.1

>prot_F-serratus_M_contig1490.3377.1 ID=prot_F-serratus_M_contig1490.3377.1|Name=mRNA_F-serratus_M_contig1490.3377.1|organism=Fucus serratus male|type=polypeptide|length=736bp
MASLLANLLVNVTRGRHDLSVESAAGASDQGREDTHDQEHTKLCVESSRN
ASRKARVLSSYRHVLLRWAAITATGSHASTTASSSRNTQGRPTTTPHRGR
TVASNTKGAADIHGTSPITPPAFFRSDLLSLKFAGDVGRHLVARAAGVSA
GTLLLKEHPYAWCLQPKLAGQLCAHCLHEVRIGTAPCSICGLEAFCSSAC
AANAQRTWHGAECLDAYGKPLEPALLSLSPECRVALRAVRRFMREETAEP
PITATSAVARRSCNPPPGTPFSSKRCGKLVMGFGDLQGHYAARSSRQNDF
LEAEAAIASVLVAGDGTESEENDSRGHEPGDPPVEESPETLAAKLISALV
KVSTNAFAVSTLRSAEPAFGHVRAINHTRVAIGLYCTAALLNHSCVPNAL
ATFDGGEMRIVATRAIEMGETVTISYGPLASKASLVSSTAERRSLLRSTY
FFHCGCPACNQENDSVDVTINKTYAGGSNLQLQAMAPSKITEFGCVESGC
DGTLLLGQGQILPTAQVSERQSSPSLLLCCDRCGARLSRRLASALMEEDK
EDRRLWAEVLSVIARLEEQVRMEDGWGRMSDKERGGNFKTSSTAVVTSSG
ETAAETATAAKGLIVQRARWRDHRLCPASMRRATAHDAHARLLATEGDFS
SAADACARALQVLTRRFAPEDRELGIEYLKLAELCFNAGLVERCLVACQH
ARVSLDVFLTSNDEQMLSLRNMQSLCAAQVRLTGS*
back to top

mRNA from alignment at F-serratus_M_contig1490:197886..204511+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1490.3377.1 ID=mRNA_F-serratus_M_contig1490.3377.1|Name=mRNA_F-serratus_M_contig1490.3377.1|organism=Fucus serratus male|type=mRNA|length=6626bp|location=Sequence derived from alignment at F-serratus_M_contig1490:197886..204511+ (Fucus serratus male)
CTTCAATTTGGATTAGGCTGTATTCCGAGGTTATGAGGCTGTTCCTGGCT TAATGGCAAGCTTGCTGGCGAATCTACTAGTCAACGTTACACGAGGACGC CATGATCTCAGCGTGGAGAGCGCAGCTGGAGCATCAGGTACGAGCTTTTC TCACCCATAACCAGCAATTGTTTTATTTCAATTGTTTGTTGGAAACCAGA GCATATGGAGATGAATAGGTTGACGCGGGACGGGGCTGCCGAAACCGTCT CGCGAGACCAAATTCTCAGGCGCGAACGGGGACAGGGATATATTATTTTC CCTTATCAGCTGATCACGAGCAGGATAAGCAGCCTCACCCGGTTGATCCA TACTCTTGCTACTGTATATGTAAGGACCATACATACCTACAAACTACGCC GGTACTTTCAACGTGCACATTTCATACCATTAGTGGGTGTGGAAAAGAGA GGCGGATATTAACCCTTCTGGCCCTACACGTGCGTTTACTGATCATTGCA CTGATCATTTTTTTTTAttTTTTTTTGTTTAGCCCGGTCTATTCGTGTAG GGGATTTTAAACAAAATACCCGAACTCCACATGCAAGGAGTTGTATTGCA CCACAGAGCAACGCTGTGCCTGCAAAGAGGGACAACAAAAGACACTCAAA TGAAGAATATATAAAAAAGGGAAGTCATTTCATTAGCACGTCCATTGCCT GGGCCGGCACCTCACATCCATCCATACTTGGGACAAAACCTTTGAACCCA TATGCATGCTCAAAAGTTGCTGTCTCGATACCATGAAAAACAACTCCTGT ATAATATCAGGAGCAACGAACGAATCACACGTCCTCCGAACCTCAGCGTA CTGTACACACTAATTACAGCAACGGCGCCGTTCTACAGCACACAAGCAAT GGTGGAGCCCACATCTGCGAGCCAGAACAACCCGTACAAGCTATATATCC CCTCTTGCCATTATATATACAATTGCAATGTACCTAGTAGTACGCGGAAA AGGATGCATACAACTATTTTAGGGAGAATGCCTGGACCCACGGAGGAGGT CAATCCATGTTCGTTTGTGTATTTTAAAAAAAAACGCGCCTATACCTTCT GAGCTTGCTCCAGTCAGGAGAAAAATTGTCAAAACGTTTAGGTGGGATCA AAGGCTGCAAATACAAAAAAAAACTAGAACGTGCCTATACCTTCTGAGCA TCCCCCAGTCAGGGGGAAAAAAAGATCAAAACGTTTAGGAAACATTGGCT ATTGTTGTGCTAATATTGTAAAATAAGGAGCGCTAGTGAGTCCGAAGGGA TCACTTTGGGCGGGGCCAGAGAAGTACAGAAGTACAGTTTGCTTGTCTGG CCCTTCAATACGCGCTCACTGATCAATTGAACCCTCCCCAATGATCAATT GAGAATATGTTGAAAATAGAGTTATAGCATGCATGGAACATCTAGGACTG AACGCCTAACAACCTCTGTCTGCGACAGCACGACCACTCCACAACCACTC CACTACCCTTCTTGTACCCTGAGAGACGTCACCAGCCTGTCGCGGCCCGC AGTCACGCCCCTGGGTCGAGATCGTAAAGCTACCGACTAGATACATGTAC TTCTCGTTTCTTTGTGCACTTCTATCCCTGTGCTTGTCTCTCAAACACTA TAATAATCGTTTTTCTGAGAATTTTATTTTAAGAAACGCGGCGAGTTTTT ATGACAGTCCGGTCTGTCGGAAGGCGAGTAGCCCAGGGCCAGAGGGGTTA ATTTGTCCACGGCGACCTGACAGGGCACCACCCGTTACAACTACCTTGAG GCGTACAGACCCTGTGCCAGCGGACTCTCGGTGGCAGTGAACGCCATCGG TACGCAATTGCGTGATCCGATAAACTCGGAACTGACCCGATGGCGTATGG CGGTTTAAATAAATAAATGGACGCCGCCGCGGAAATCGGGAGGAATCCCG TGAGTAAGCACCAGACTTAAGCCAGAGAATAGAGACGAGCAGGCTGATGC GGGACGGGACTGCCGGACCCGTCTCGCGAGACCAAATTCTCAGGCGCGAA CGCGGACAGGGAAATAGTAATTTTCCCTGTTCAGCTGACCACGTGTAGGA TTGGCAACCCTCCCCGGTCGATCCATACTCTTGCTATATGTGATGACCAT ACATACATGCATACTCCCCGGCAGCCAACCTTTCCCATTGCGTGCATGCG AGCAACCGCGCCAACTCGCCCCATTCGTTCAGCTGATCATCAGAATGACC TATTGTACATTAGTTTCGAGTTCAGTACAGAATTTCAATCTCGCCCAAAT TTCTTGTACACATAAAAGCCCGCAGAAAAGTTGATGTGGGTGGGGACGTG AGTGAGCAAAGTTGGACTTTCATCGCGGAAGAAAGCGTTGGCGTTGTCTA TTTTCAAGGCGATAACCCCTAGGCGTGGACTGGGTGGGTCCTGTTCGACC ACAGACTTCATGAGGAGTCGTGCAGATCTATAGTAGTAATAGTAACCTAT TAATAGTGTCATGGATGGCCTCAACGGCGGTCAAGACGAGAAAAACAAAC AAACAAAAAAACTCAAAGAGCTCTACAACAGTACAGCACGAGCACGTCAG TGCTTTGTACATACCCGGTAGAAGATAGAGCTCTCAGTCGGAGTATTTAC AAGCACGAATACTTCTATTACCATACTATTAATAAAGTACTTTGCTGTGT ACTCTGTGTACAGTAAATCTTGTTTAGAGTTGACGTCTGAGCTATCACTT TGCTCCCTCCGATTTTGTGCGTCGCGTTACGAAGCAACTGGCAGCGTGCC GACAAATCTTGTATTGGCCCAACTGCCTCAATCTGTCTTGTTTCCCGCAG ATCAAGGTAGGGAAGACACCCACGATCAGGAGCACACAAAGCTTTGCGTT GAGTCAAGTCGGAACGCTAGCAGAAAGGCTCGCGTGCTTTCCAGCTATCG TCACGTTCTTCTCCGGTGGGCAGCGATAACAGCAACGGGCAGCCATGCTT CGACAACTGCTTCCAGCAGCCGCAACACGCAAGGTCGCCCGACTACGACT CCACATCGAGGAAGGACAGTTGCGAGCAACACTAAGGGCGCCGCTGATAT TCACGGTACGAGCCCAATCACTCCACCGGCCTTCTTTCGCAGCGATCTGC TATCTCTGAAATTTGCGGGCGATGTCGGCAGGCATCTCGTGGCCAGGGCT GCGGGGGTATCTGCCGGCACCCTGCTGTTGAAAGAACACCCTTACGCATG GTGCTTGCAGCCGAAACTCGCCGGCCAACTATGCGCTCACTGTCTCCACG AGGTACGCAGTAAGCACGAGACAGTTGTTACGTCCCCGTGGCTCCTTGAG CAAGTCCACTTGGCATTCGGTAAACTTGTCTCGAGGTTCATGAACACCCT TACGCATGATGCTTGAAGCCGAAACTCGCCGGGCAACTATGCGCTCATTG TCTCCACGAGGTACGCAGTAAGCACGAGACAGCTGTAACGTCCCCGTGGC TCCTTGAGCAAGTCTACTTGGCATTCGGTAAACTTGTCTGAGGTTTATTA GCGCTGGAGTATGTGGACCTGGTGGGTGATGTCCGCTGCTTCCTGCTCTG TACCCCATTCGATTTTTTTGGTTTTGTATTATTTTCCCAACCGGTCAGAT TGAAGTTGGCACCGCTCCCTGCTCCATATGCGGCCTAGAGGCCTTCTGCA GTTCCGCATGCGCGGCGAATGCGCAGAGAACGTGGCATGGAGCCGAATGT CTCGATGCGTATGGAAAGCCGCTAGAGCCGGCCTTGTTGAGCTTGTCCCC CGAGTGTCGGGTGGCGCTTCGGGCAGTTCGGCGATTCATGCGGGAGGAAA CAGCCGAGCCCCCGATCACCGCCACCTCAGCTGTTGCCCGAAGATCCTGC AATCCTCCTCCTGGCACCCCCTTCAGCTCGAAACGCTGTGGAAAGCTGGT AATGGGGTTCGGCGACCTTCAAGGACACTACGCGGCACGATCATCCCGTC AGAACGATTTTTTGGAAGCCGAAGCGGCGATTGCGTCTGTCCTGGTTGCG GGCGACGGCACGGAAAGTGAAGAAAATGATAGCAGGGGGCATGAACCCGG CGACCCACCAGTCGAGGAATCACCCGAGACTCTCGCTGCTAAGCTGATCT CGGCGTTGGTGAAGGTGACGAGAGAGAGAGTGCTGGCGCAACAAGTTACA GCATGACAGGTCATCTCTAATGTATATTTGTCTTTCGCTTTTAGCCGACC TTATCAACCTCAACTCCCATGCCGAGCTCTTCCAATCAATGGTATACATA TTTCATCTTGTTGGTAGTGTTGCGCGAAAGGTCGGAGGGAAGAAGGCGAC GTGATCCCCTTTATGGTTCAATATTGTCACCAGGTCAGCACAAATGCCTT CGCGGTGTCGACGCTTCGTAGCGCGGAGCCTGCCTTTGGTCACGTCCGAG CAATAAATCACACTCGGGTGGCTATTGGGCTCTACTGCACGGCAGCGTTG TTGAACCACTCCTGCGTCCCCAACGCACTAGCCACGTTCGACGGAGGGGA GATGAGGATCGTCGCTACGCGCGCTATAGAAATGGGAGAGACTGTAACTA TATCCTACGGACCGCTGGCATCGAAGGCAAGTCTTGTTAACCGCGCGTCG TTTCAGTTGCAACAGGAATACCGTGAGAGTAAATTACTTAAGATTATGGG CGACGAAATCGTTACCGTACTGCAGGCCTTACTTGAAACATCCAATGCCT TGGGCCATTCTTTATGGCAAACGGCAAAACAAAAACAAAAACAACTAGAA GAATGTGGAAATTCTGTGGCCGAAAAAAGCGTGGAGAAAAATTGTAGGTG ACCCTTTATGGGATGGAGAAAAAAGAAAAAATAACTAGCGGGGAATATAC CGGGTCGACCCCGGCGTTTTCTGCCACCCATCACCGCACAAAGAGAGGTG CAAGTATGTATACATAGCAGAGTATGGATCATCCGGGTAAGGTTGCCAAT CCTGCTCGTGGTCAACTGAACATGGAAAAATAATATTTCCCTCTCCTCGT TTGCACCTGAGAATTTGGTCTGGCGAGACAGGGTCGTTTAGTACTTAATT ACGAGTATATGGCAAATAGAGTGCGCAGAGCGACATCGTTTCGATGGGTC CGTGAGCCCTCGGACGCTCGTACACAGTCCGTCTCTGCTTGATCTCCGGC GCCACCCATTCAACCGCTCCCGCTGCCGGCGATCAGCTTGTCCGGGGCCA TCACCTCAACAACTTCTATAGTTTTCCCTCAAACCTGCTTGTCTGGGCCC ATCACCTCAACAGCTTCTATACATTTCCTCCAAATATGCTGCTCCAGCGA CCTTCGCACAACTACTGCTGCTCGGCACCCATCGTACAACAGCACTCCCG AGCTCTTCTTTACCGATCTTCGATAGGAGGGATGCTACAGTCCCGACCTC CCAATCGTGCTTGAGAAGGCGTGAATTATTTCTGTGGAGAAGTAAACTTG TCGAGCCACCTACATAATCTAACCTAATTTATGTAGGTCGGCAGAGGAAA ACAGCCTCGCAAAGAATTTCGCAATTTCTGTAGGGCGGAATTCCGTGTGT TGTGGGGCCCATAGTGCGCCGTTTACAAAAAATTCGCCACAGAAATTTCA TTTTTTCATTTTTTCATTTTTTACTGTCGTCCCTGTCTCCCATAAAGATT GACCTTAACATGATTGCCGACAGGTGTCGTCGACTGCCGAGCGCCGGTCA CTGCTAAGAAGCACATACTTCTTCCATTGTGGATGCCCAGCTTGCAACCA AGAAAATGATTCAGTAGATGTAACTATAAATAAGACATACGCTGGAGGCT CCAATCTTCAGCTTCAAGCCATGGCGCCATCCAAAATCACTGAATTTGGA TGCGTAGAGTCTGGATGTGATGGGACGCTCCTCCTCGGGCAAGGGCAAAT CTTGCCGACGGCGCAAGTCTCGGAGCGCCAATCCTCTCCCAGCTTGCTCC TATGTTGTGACCGCTGCGGAGCTCGCTTGTCCCGGCGTTTGGCAAGTGCG CTGATGGAAGAGGACAAAGAGGACCGACGTCTTTGGGCGGAAGTTTTGTC GGTGATTGCCCGTTTAGAAGAGCAAGTCCGCATGGAGGACGGCTGGGGTC GAATGAGCGATAAGGAAAGGGGGGGAAATTTCAAGACATCTTCGACTGCA GTAGTAACATCATCTGGAGAGACTGCAGCTGAAACCGCAACCGCGGCCAA GGGCCTTATAGTTCAACGAGCTCGCTGGCGCGATCATCGACTATGTCCTG CATCGATGAGGCGAGCGACCGCGCACGACGCGCACGCCCGTCTGCTCGCC ACGGAAGGGGACTTCTCCAGCGCTGCCGATGCCTGTGCGCGAGCACTGCA AGTGCTTACGCGGAGGTTCGCGCCTGAGGATCGTGAACTGGGCATCGAGT ACCTCAAGCTTGCCGAGCTGTGCTTCAACGCGGGCCTGGTGGAGCGATGC CTGGTAGCTTGTCAACACGCGAGGGTGTCACTGGACGTTTTTCTCACGTC AAATGACGAGCAGATGTTGTCGTTAAGAAATATGCAGTCCTTATGTGCCG CCCAAGTACGCCTTACCGGTAGTTAG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1490:197886..204511+

>mRNA_F-serratus_M_contig1490.3377.1 ID=mRNA_F-serratus_M_contig1490.3377.1|Name=mRNA_F-serratus_M_contig1490.3377.1|organism=Fucus serratus male|type=CDS|length=4416bp|location=Sequence derived from alignment at F-serratus_M_contig1490:197886..204511+ (Fucus serratus male)
ATGGCAAGCTTGCTGGCGAATCTACTAGTCAACGTTACACGAGGACGCCA
TGATCTCAGCGTGGAGAGCGCAGCTGGAGCATCAGATGGCAAGCTTGCTG
GCGAATCTACTAGTCAACGTTACACGAGGACGCCATGATCTCAGCGTGGA
GAGCGCAGCTGGAGCATCAGATCAAGGTAGGGAAGACACCCACGATCAGG
AGCACACAAAGCTTTGCGTTGAGTCAAGTCGGAACGCTAGCAGAAAGGCT
CGCGTGCTTTCCAGCTATCGTCACGTTCTTCTCCGGTGGGCAGCGATAAC
AGCAACGGGCAGCCATGCTTCGACAACTGCTTCCAGCAGCCGCAACACGC
AAGGTCGCCCGACTACGACTCCACATCGAGGAAGGACAGTTGCGAGCAAC
ACTAAGGGCGCCGCTGATATTCACGGTACGAGCCCAATCACTCCACCGGC
CTTCTTTCGCAGCGATCTGCTATCTCTGAAATTTGCGGGCGATGTCGGCA
GGCATCTCGTGGCCAGGGCTGCGGGGGTATCTGCCGGCACCCTGCTGTTG
AAAGAACACCCTTACGCATGGTGCTTGCAGCCGAAACTCGCCGGCCAACT
ATGCGCTCACTGTCTCCACGAGGTACGCAATCAAGGTAGGGAAGACACCC
ACGATCAGGAGCACACAAAGCTTTGCGTTGAGTCAAGTCGGAACGCTAGC
AGAAAGGCTCGCGTGCTTTCCAGCTATCGTCACGTTCTTCTCCGGTGGGC
AGCGATAACAGCAACGGGCAGCCATGCTTCGACAACTGCTTCCAGCAGCC
GCAACACGCAAGGTCGCCCGACTACGACTCCACATCGAGGAAGGACAGTT
GCGAGCAACACTAAGGGCGCCGCTGATATTCACGGTACGAGCCCAATCAC
TCCACCGGCCTTCTTTCGCAGCGATCTGCTATCTCTGAAATTTGCGGGCG
ATGTCGGCAGGCATCTCGTGGCCAGGGCTGCGGGGGTATCTGCCGGCACC
CTGCTGTTGAAAGAACACCCTTACGCATGGTGCTTGCAGCCGAAACTCGC
CGGCCAACTATGCGCTCACTGTCTCCACGAGGTACGCATTGGCACCGCTC
CCTGCTCCATATGCGGCCTAGAGGCCTTCTGCAGTTCCGCATGCGCGGCG
AATGCGCAGAGAACGTGGCATGGAGCCGAATGTCTCGATGCGTATGGAAA
GCCGCTAGAGCCGGCCTTGTTGAGCTTGTCCCCCGAGTGTCGGGTGGCGC
TTCGGGCAGTTCGGCGATTCATGCGGGAGGAAACAGCCGAGCCCCCGATC
ACCGCCACCTCAGCTGTTGCCCGAAGATCCTGCAATCCTCCTCCTGGCAC
CCCCTTCAGCTCGAAACGCTGTGGAAAGCTGGTAATGGGGTTCGGCGACC
TTCAAGGACACTACGCGGCACGATCATCCCGTCAGAACGATTTTTTGGAA
GCCGAAGCGGCGATTGCGTCTGTCCTGGTTGCGGGCGACGGCACGGAAAG
TGAAGAAAATGATAGCAGGGGGCATGAACCCGGCGACCCACCAGTCGAGG
AATCACCCGAGACTCTCGCTGCTAAGCTGATCTCGGCGTTGGTGAAGTTG
GCACCGCTCCCTGCTCCATATGCGGCCTAGAGGCCTTCTGCAGTTCCGCA
TGCGCGGCGAATGCGCAGAGAACGTGGCATGGAGCCGAATGTCTCGATGC
GTATGGAAAGCCGCTAGAGCCGGCCTTGTTGAGCTTGTCCCCCGAGTGTC
GGGTGGCGCTTCGGGCAGTTCGGCGATTCATGCGGGAGGAAACAGCCGAG
CCCCCGATCACCGCCACCTCAGCTGTTGCCCGAAGATCCTGCAATCCTCC
TCCTGGCACCCCCTTCAGCTCGAAACGCTGTGGAAAGCTGGTAATGGGGT
TCGGCGACCTTCAAGGACACTACGCGGCACGATCATCCCGTCAGAACGAT
TTTTTGGAAGCCGAAGCGGCGATTGCGTCTGTCCTGGTTGCGGGCGACGG
CACGGAAAGTGAAGAAAATGATAGCAGGGGGCATGAACCCGGCGACCCAC
CAGTCGAGGAATCACCCGAGACTCTCGCTGCTAAGCTGATCTCGGCGTTG
GTGAAGGTCAGCACAAATGCCTTCGCGGTGTCGACGCTTCGTAGCGCGGA
GCCTGCCTTTGGTCACGTCCGAGCAATAAATCACACTCGGGTGGCTATTG
GGCTCTACTGCACGGCAGCGTTGTTGAACCACTCCTGCGTCCCCAACGCA
CTAGCCACGTTCGACGGAGGGGAGATGAGGATCGTCGCTACGCGCGCTAT
AGAAATGGGAGAGACTGTAACTATATCCTACGGACCGCTGGCATCGAAGG
CAAGTCTTGTCAGCACAAATGCCTTCGCGGTGTCGACGCTTCGTAGCGCG
GAGCCTGCCTTTGGTCACGTCCGAGCAATAAATCACACTCGGGTGGCTAT
TGGGCTCTACTGCACGGCAGCGTTGTTGAACCACTCCTGCGTCCCCAACG
CACTAGCCACGTTCGACGGAGGGGAGATGAGGATCGTCGCTACGCGCGCT
ATAGAAATGGGAGAGACTGTAACTATATCCTACGGACCGCTGGCATCGAA
GGCAAGTCTTGTGTCGTCGACTGCCGAGCGCCGGTCACTGCTAAGAAGCA
CATACTTCTTCCATTGTGGATGCCCAGCTTGCAACCAAGAAAATGATTCA
GTAGATGTAACTATAAATAAGACATACGCTGGAGGCTCCAATCTTCAGCT
TCAAGCCATGGCGCCATCCAAAATCACTGAATTTGGATGCGTAGAGTCTG
GATGTGATGGGACGCTCCTCCTCGGGCAAGGGCAAATCTTGCCGACGGCG
CAAGTCTCGGAGCGCCAATCCTCTCCCAGCTTGCTCCTATGTTGTGACCG
CTGCGGAGCTCGCTTGTCCCGGCGTTTGGCAAGTGCGCTGATGGAAGAGG
ACAAAGAGGACCGACGTCTTTGGGCGGAAGTTTTGTCGGTGATTGCCCGT
TTAGAAGAGCAAGTCCGCATGGAGGACGGCTGGGGTCGAATGAGCGATAA
GGAAAGGGGGGGAAATTTCAAGACATCTTCGACTGCAGTAGTAACATCAT
CTGGAGAGACTGCAGCTGAAACCGCAACCGCGGCCAAGGGCCTTATAGTT
CAACGAGCTCGCTGGCGCGATCATCGACTATGTCCTGCATCGATGAGGCG
AGCGACCGCGCACGACGCGCACGCCCGTCTGCTCGCCACGGAAGGGGACT
TCTCCAGCGCTGCCGATGCCTGTGCGCGAGCACTGCAAGTGCTTACGCGG
AGGTTCGCGCCTGAGGATCGTGAACTGGGCATCGAGTACCTCAAGCTTGC
CGAGCTGTGCTTCAACGCGGGCCTGGTGGAGCGATGCCTGGTAGCTTGTC
AACACGCGAGGGTGTCACTGGACGTTTTTCTCACGTCAAATGACGAGCAG
ATGTTGTCGTTAAGAAATATGCAGTCCTTATGTGCCGCCCAAGTACGCCT
TACCGGTAGTTAGGTGTCGTCGACTGCCGAGCGCCGGTCACTGCTAAGAA
GCACATACTTCTTCCATTGTGGATGCCCAGCTTGCAACCAAGAAAATGAT
TCAGTAGATGTAACTATAAATAAGACATACGCTGGAGGCTCCAATCTTCA
GCTTCAAGCCATGGCGCCATCCAAAATCACTGAATTTGGATGCGTAGAGT
CTGGATGTGATGGGACGCTCCTCCTCGGGCAAGGGCAAATCTTGCCGACG
GCGCAAGTCTCGGAGCGCCAATCCTCTCCCAGCTTGCTCCTATGTTGTGA
CCGCTGCGGAGCTCGCTTGTCCCGGCGTTTGGCAAGTGCGCTGATGGAAG
AGGACAAAGAGGACCGACGTCTTTGGGCGGAAGTTTTGTCGGTGATTGCC
CGTTTAGAAGAGCAAGTCCGCATGGAGGACGGCTGGGGTCGAATGAGCGA
TAAGGAAAGGGGGGGAAATTTCAAGACATCTTCGACTGCAGTAGTAACAT
CATCTGGAGAGACTGCAGCTGAAACCGCAACCGCGGCCAAGGGCCTTATA
GTTCAACGAGCTCGCTGGCGCGATCATCGACTATGTCCTGCATCGATGAG
GCGAGCGACCGCGCACGACGCGCACGCCCGTCTGCTCGCCACGGAAGGGG
ACTTCTCCAGCGCTGCCGATGCCTGTGCGCGAGCACTGCAAGTGCTTACG
CGGAGGTTCGCGCCTGAGGATCGTGAACTGGGCATCGAGTACCTCAAGCT
TGCCGAGCTGTGCTTCAACGCGGGCCTGGTGGAGCGATGCCTGGTAGCTT
GTCAACACGCGAGGGTGTCACTGGACGTTTTTCTCACGTCAAATGACGAG
CAGATGTTGTCGTTAAGAAATATGCAGTCCTTATGTGCCGCCCAAGTACG
CCTTACCGGTAGTTAG
back to top