mRNA_F-serratus_M_contig1475.3292.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1475.3292.1 vs. uniprot
Match: A0A1S3J0Y4_LINUN (uncharacterized protein LOC106169244 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3J0Y4_LINUN) HSP 1 Score: 122 bits (306), Expect = 3.480e-31 Identity = 73/192 (38.02%), Postives = 100/192 (52.08%), Query Frame = 1
Query: 1 IEAYIYADNFFDLFLNGELVSSDTRFLPHTAFQSTLKLLPG-DNILAVYLRDNADNSTGLEYGDRCVGDGGFRFRALDDSLVSSSEWKCRTVFYGPINPEQCYGLGLDTT---GYSAFGDDGLEKTLALDNDEVWGPEGRLADELIG---EFEEGEERPVSAVIPSELDWGESEFIWRPSLRFDNRIVCRTT 555
+ ++Y DN+F L++NG ++ DT F P TA + + G +N+ A++ DNADN T LEY D VGDGG R LDD V+SS WKC+T F GPI+ G TT + ++ K D+ W DE +G EGE + P + WG+S FIW SL +DN +VCR T
Sbjct: 28 VSGHVYVDNYFKLYVNGGFIADDTLFKPQTATAVSFDVGDGGENVFAIWAADNADNLTTLEYNDTQVGDGGLRM-VLDDGTVTSSAWKCKTFFRGPIDLNCTSGPKPWTTCRGEHFTMPENWWTKNFTTDD--TWVSATEFTDEEVGWGRAPREGE-----GINPRTISWGQSRFIWTSSLLYDNTVVCRYT 211
BLAST of mRNA_F-serratus_M_contig1475.3292.1 vs. uniprot
Match: A0A518J282_9BACT (Uncharacterized protein n=4 Tax=Rosistilla TaxID=2795779 RepID=A0A518J282_9BACT) HSP 1 Score: 90.5 bits (223), Expect = 5.850e-19 Identity = 62/184 (33.70%), Postives = 95/184 (51.63%), Query Frame = 1
Query: 13 IYADNFFDLFLNGELVSSDT-RFLPHTAFQSTLKLLPGDNI-LAVYLRDNADNSTGLEYGDRCVGDGGFRFRALDDSLVSSSEWKCRTVFYGPINPEQCYGLGLDTTGYSAFGDDGLEKTLALD-NDEVWGPEGRLADELIGEFEEGEERPVSAVIPSELDWGESEFIWRPSLRFDNRIVCRTT 555
+YADN+F L++NGELV+ D+ RF+PH ++ + P + LAV +DNAD TG+EY + +GDGGF + L D V+ WK ++V YGPI+ DT ++ E A+D +D W + ++E RP + D+ ++FIW L DN ++ R T
Sbjct: 57 VYADNWFSLYINGELVAVDSIRFMPHNVI--SVDVFPKYPMTLAVIAKDNADAKTGMEYNNTQIGDGGFILK-LADGTVTGPHWKAKSVSYGPID--------RDTRNPRVVHEELPENWFAIDFDDSSW--------QAAKVYDEQTVRPKRPFY--QYDFEGAKFIWADDLELDNTVLFRLT 219
BLAST of mRNA_F-serratus_M_contig1475.3292.1 vs. uniprot
Match: UPI001BB51F0F (Sulfatase-like hydrolase/transferase n=1 Tax=Akkermansiaceae bacterium TaxID=2562705 RepID=UPI001BB51F0F) HSP 1 Score: 93.2 bits (230), Expect = 1.060e-18 Identity = 66/187 (35.29%), Postives = 94/187 (50.27%), Query Frame = 1
Query: 1 IEAYIYADNFFDLFLNGELVSSDT-RFLPHTAFQSTLKLLPGDNI-LAVYLRDNADNSTGLEYGDRCVGDGGFRFRALDDSLVSSSEWKCRTVFYGPINPEQCYGLGLDTTGYSAFGDDGLEKTLALD-NDEVWGPEGRLADELIGEFEEGEERPVSAVIPSELDWGESEFIWRPSLRFDNRIVCRT 552
I+A IYADN+F L++NG+LV++D F+PH TL +LP + +AV RDNAD TG+EY + +GDGGF + D V+++ WK + F+GPIN DT E A D +D W EF E E P D+ +++IW L+ DN ++ RT
Sbjct: 40 IQANIYADNWFALYINGQLVATDPIPFIPHNVV--TLDILPEYPMTIAVMARDNADPKTGMEYDNTSIGDGGFILK-FSDGTVTTASWKAKDFFHGPINS--------DTANPKVRATPIPENWFATDFDDSSWAN--------AKEFTEQEIDPKKPYFDH--DFKGAKWIWSDDLKLDNTVIFRT 205
BLAST of mRNA_F-serratus_M_contig1475.3292.1 vs. uniprot
Match: A0A5B9QMI6_9BACT (Uncharacterized protein n=1 Tax=Roseimaritima ulvae TaxID=980254 RepID=A0A5B9QMI6_9BACT) HSP 1 Score: 88.2 bits (217), Expect = 4.400e-18 Identity = 59/182 (32.42%), Postives = 95/182 (52.20%), Query Frame = 1
Query: 13 IYADNFFDLFLNGELVSSDT-RFLPHTAFQSTLKLLPGDNI-LAVYLRDNADNSTGLEYGDRCVGDGGFRFRALDDSLVSSSEWKCRTVFYGPINPEQCYGLGLDTTGYSAFGDDGLEKTLALD-NDEVWGPEGRLADELIGEFEEGEERPVSAVIPSELDWGESEFIWRPSLRFDNRIVCR 549
+YADN+F L++NG+LV+ D+ RF+PH ++ + P + +AV +DNAD T +EY + +GDGGF + + D V+ WK +VF+GPI+ DT + E +A+D +D W + EF+E RP+ + D+ ++FIW L DN ++ R
Sbjct: 57 VYADNWFSLYINGQLVAVDSIRFMPHNVI--SVDVFPKYPMTIAVIAKDNADAKTAMEYNNTQIGDGGFILK-MGDGTVTGKHWKALSVFHGPID--------RDTKNPRVIHREIPENWMAVDFDDSDW--------QAAKEFDEKTVRPMRPFY--QYDFEGAKFIWADDLELDNTVLFR 217
BLAST of mRNA_F-serratus_M_contig1475.3292.1 vs. uniprot
Match: UPI001E43DD08 (hypothetical protein n=2 Tax=Roseiconus lacunae TaxID=2605694 RepID=UPI001E43DD08) HSP 1 Score: 87.8 bits (216), Expect = 5.820e-18 Identity = 61/184 (33.15%), Postives = 90/184 (48.91%), Query Frame = 1
Query: 13 IYADNFFDLFLNGELVSSDT-RFLPHTAFQSTLKLLPGDNI-LAVYLRDNADNSTGLEYGDRCVGDGGFRFRALDDSLVSSSEWKCRTVFYGPINPEQCYGLGLDTTGYSAFGDDGLEKTLALD-NDEVWGPEGRLADELIGEFEEGEERPVSAVIPSELDWGESEFIWRPSLRFDNRIVCRTT 555
+YADN+F+L++NGEL + D+ RF+PH ++ + P + +AV +DNAD T LEY +GDGGF + + D V+ WK ++VF+GPIN D D E + +D +D W EF E RP D+ ++FIW L DN ++ R T
Sbjct: 55 VYADNWFELYINGELTAVDSIRFMPHNVV--SVDVFPKYPMTIAVMAKDNADAKTALEYNHTQIGDGGFILK-MGDGTVTGKHWKAKSVFHGPIN--------RDMRNPQVRRSDIPENWMTVDFDDSEWS--------AACEFSEQTVRPKRPFYQH--DFEGAKFIWADDLELDNTVLFRVT 217
BLAST of mRNA_F-serratus_M_contig1475.3292.1 vs. uniprot
Match: A0A7M2X0M0_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7M2X0M0_9BACT) HSP 1 Score: 87.8 bits (216), Expect = 7.000e-18 Identity = 62/187 (33.16%), Postives = 95/187 (50.80%), Query Frame = 1
Query: 1 IEAYIYADNFFDLFLNGELVSSDT-RFLPHTAFQSTLKLLPGDNI-LAVYLRDNADNSTGLEYGDRCVGDGGFRFRALDDSLVSSSEWKCRTVFYGPINPEQCYGLGLDTTGYSAFGDDGLEKTLALD-NDEVWGPEGRLADELIGEFEEGEERPVSAVIPSELDWGESEFIWRPSLRFDNRIVCRT 552
I+A +YADN+F L++NGELV+ D+ +F+PH ++ LLP + +AV +DNAD TG+EY + +GDGGF + D V+S+ WK + +GP+ G DT + A+D +D W EF E + P + D+ ++FIW + DN +V RT
Sbjct: 49 IKANVYADNWFMLYINGELVAVDSIKFIPHNVV--SVDLLPSYPMTIAVLAKDNADPKTGMEYANTNIGDGGFILK-FGDGTVTSASWKAKRFSWGPV--------GHDTKNPKVESIPLPDNWYAVDFDDSQWSH--------AKEFTEEQVNPKQTYF--DYDFKGAKFIWTDDIDLDNTVVFRT 214
BLAST of mRNA_F-serratus_M_contig1475.3292.1 vs. uniprot
Match: A0A518DE21_9BACT (Uncharacterized protein n=1 Tax=Pirellulimonas nuda TaxID=2528009 RepID=A0A518DE21_9BACT) HSP 1 Score: 87.8 bits (216), Expect = 7.000e-18 Identity = 62/186 (33.33%), Postives = 93/186 (50.00%), Query Frame = 1
Query: 1 IEAYIYADNFFDLFLNGELVSSDT-RFLPHTAFQSTLKLLPGDNI-LAVYLRDNADNSTGLEYGDRCVGDGGFRFRALDDSLVSSSEWKCRTVFYGPINPEQCYGLGLDTTGYSAFGDDGLEKTLALDNDEVWGPEGRLADELIGEFEEGEERPVSAVIPSELDWGESEFIWRPSLRFDNRIVCRT 552
+ A +YADN+F L++NGELV+ D+ RF+PH ++ +LP + +AV RDNAD TG+EY + +GD GF + D VS++ WK + +GP+ G DT + A+ D+ P R EF E + P + E D+ + FIW L DN ++ RT
Sbjct: 42 VRANVYADNWFKLYINGELVAVDSIRFIPHNVV--SVDILPAYPMTIAVMARDNADPETGMEYANTSIGDAGFILK-FGDGTVSNAAWKAKKFSWGPV--------GADTKNPRVESIAVPKDWYAVGFDDSQWPNAR-------EFTEAQVDPKAPYF--EHDFQGAAFIWSDDLALDNLVLLRT 207
BLAST of mRNA_F-serratus_M_contig1475.3292.1 vs. uniprot
Match: A0A4P5XZ77_9BACT (Uncharacterized protein n=1 Tax=Planctomycetia bacterium TaxID=2052181 RepID=A0A4P5XZ77_9BACT) HSP 1 Score: 86.7 bits (213), Expect = 1.880e-17 Identity = 62/186 (33.33%), Postives = 94/186 (50.54%), Query Frame = 1
Query: 1 IEAYIYADNFFDLFLNGELVSSDT-RFLPHTAFQSTLKLLPGDNI-LAVYLRDNADNSTGLEYGDRCVGDGGFRFRALDDSLVSSSEWKCRTVFYGPINPEQCYGLGLDTTGYSAFGDDGLEKTLALD-NDEVWGPEGRLADELIGEFEEGEERPVSAVIPSELDWGESEFIWRPSLRFDNRIVCR 549
I+A IYADN+F L++NGELV+ D+ +F+PH ++ +LP + +AV +DNAD TG+EY + +GDGGF + D V+++ WK + GPIN DT E A+D +D WG +E +G P E D+ ++FIW + DN ++ R
Sbjct: 48 IKANIYADNWFMLYINGELVAVDSIKFIPHNVI--SVDILPTYPMTIAVMAKDNADPKTGMEYANTNIGDGGFILK-FGDGTVTNANWKAKAFSTGPIN--------RDTKNPRVENIPIPENWYAVDFDDSSWGKAKEYTEEQVG--------PKQPFF--EHDFKGAKFIWTDDIDLDNTVLFR 212
BLAST of mRNA_F-serratus_M_contig1475.3292.1 vs. uniprot
Match: D5SYI0_PLAL2 (Uncharacterized protein n=1 Tax=Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 / Mu 290) TaxID=521674 RepID=D5SYI0_PLAL2) HSP 1 Score: 86.3 bits (212), Expect = 2.270e-17 Identity = 62/186 (33.33%), Postives = 95/186 (51.08%), Query Frame = 1
Query: 1 IEAYIYADNFFDLFLNGELVSSDT-RFLPHTAFQSTLKLLPGDNI-LAVYLRDNADNSTGLEYGDRCVGDGGFRFRALDDSLVSSSEWKCRTVFYGPINPEQCYGLGLDTTGYSAFGDDGLEKTLALD-NDEVWGPEGRLADELIGEFEEGEERPVSAVIPSELDWGESEFIWRPSLRFDNRIVCR 549
I+A IYADN+F L++NGELV+ D+ +F+PH ++ +LP + +AV RDNAD TG+EY + +GD GF + D V++++WK + +GPIN DT E A+D +D WG E+ E + P E D+ ++FIW + DN ++ R
Sbjct: 40 IKASIYADNWFILYINGELVAVDSIKFIPHNVV--SVDILPSYPMTIAVMARDNADPKTGMEYANTNIGDAGFVLK-FGDGTVTNAKWKAKKYSWGPIN--------RDTRNPRVENLPIPEDWYAVDFDDSDWGH--------AKEYTEAQVEPKQPFF--EHDFKGAKFIWTDDIELDNTVIFR 204
BLAST of mRNA_F-serratus_M_contig1475.3292.1 vs. uniprot
Match: Q7UEA9_RHOBA (Uncharacterized protein n=1 Tax=Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1) TaxID=243090 RepID=Q7UEA9_RHOBA) HSP 1 Score: 86.3 bits (212), Expect = 2.400e-17 Identity = 59/185 (31.89%), Postives = 98/185 (52.97%), Query Frame = 1
Query: 13 IYADNFFDLFLNGELVSSDT-RFLPHTAFQSTLKLLPGDNI-LAVYLRDNADNSTGLEYGDRCVGDGGFRFRALDDSLVSSSEWKCRTVFYGPINPEQCYGLGLDTTGYSAFGDDGLEKTLALD-NDEVWGPEGRLADELIGEFEE---GEERPVSAVIPSELDWGESEFIWRPSLRFDNRIVCR 549
+YADN+F L++NGEL++ D+ RF+PH ++ + P + +AV +DNAD T +EY + +GDGGF + + D V+ + WK +++F+GPI+ DT ++ E A+D +D W + EF+E G +RP + D+ ++FIW L DN ++ R
Sbjct: 58 VYADNWFSLYINGELIAVDSIRFMPHNVI--SVDVFPSYPMTIAVIAKDNADPITAMEYNNTQIGDGGFILK-MADGTVTGNHWKAKSIFHGPID--------RDTRNPKVRREEMPENWTAVDFDDSDW--------QSAKEFDEQTVGPKRPFY-----QHDFEGAKFIWADDLELDNTVLFR 218 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1475.3292.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1475.3292.1 >prot_F-serratus_M_contig1475.3292.1 ID=prot_F-serratus_M_contig1475.3292.1|Name=mRNA_F-serratus_M_contig1475.3292.1|organism=Fucus serratus male|type=polypeptide|length=185bp IEAYIYADNFFDLFLNGELVSSDTRFLPHTAFQSTLKLLPGDNILAVYLRback to top mRNA from alignment at F-serratus_M_contig1475:104594..105661+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1475.3292.1 ID=mRNA_F-serratus_M_contig1475.3292.1|Name=mRNA_F-serratus_M_contig1475.3292.1|organism=Fucus serratus male|type=mRNA|length=1068bp|location=Sequence derived from alignment at F-serratus_M_contig1475:104594..105661+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1475:104594..105661+ >mRNA_F-serratus_M_contig1475.3292.1 ID=mRNA_F-serratus_M_contig1475.3292.1|Name=mRNA_F-serratus_M_contig1475.3292.1|organism=Fucus serratus male|type=CDS|length=1110bp|location=Sequence derived from alignment at F-serratus_M_contig1475:104594..105661+ (Fucus serratus male)back to top |