mRNA_F-serratus_M_contig1458.3234.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1458.3234.1
Unique NamemRNA_F-serratus_M_contig1458.3234.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig1458.3234.1 vs. uniprot
Match: D8LF06_ECTSI (Proteasome subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF06_ECTSI)

HSP 1 Score: 337 bits (863), Expect = 7.090e-112
Identity = 164/210 (78.10%), Postives = 188/210 (89.52%), Query Frame = 3 
Query:  189 MDTLLGISGEGFVVIAADAQVARSILLYQSNVDKISQLTEDKILACAGPRSDCVNFSEYISKNIALYELNNSVKLGTKATANFIRGELAAAIRKGPIQAQLLMGGVDKREGGKGSAALYWLDYLGTMQQVPYGAHGYGANFTLSVMDRDYIKGLSLDEALSIIDKCIKELHTRFLISQKNFVIKVVTADGIKVIRAPPAPDMGEAAEEAK 818
            MDTLLGI+GEGFVV+AADAQVARSILLY++N+DKI+ L ++K LACAGP+SDCV+F+EYISKN+ALYELNN VKL TKA A FIRGELA A+RKGP Q QLLMGGVDKRE GK  A+L+WLDYLGT+Q+VPYGAHGYGA FTLSVMDR+Y+KGLSLDEAL IID CIKELHTRFLI+QKNFVIKVVTA+GIKV+R PP PD+G A   A+
Sbjct:    1 MDTLLGIAGEGFVVLAADAQVARSILLYKNNMDKIAHLADNKALACAGPQSDCVSFTEYISKNMALYELNNDVKLTTKAAATFIRGELAKALRKGPFQTQLLMGGVDKREAGKDEASLFWLDYLGTLQKVPYGAHGYGAAFTLSVMDREYVKGLSLDEALGIIDNCIKELHTRFLIAQKNFVIKVVTAEGIKVVRGPPTPDLGAAGASAE 210
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BLAST of mRNA_F-serratus_M_contig1458.3234.1 vs. uniprot
Match: A0A836CPT6_9STRA (Proteasome subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPT6_9STRA)

HSP 1 Score: 243 bits (619), Expect = 1.820e-75
Identity = 120/195 (61.54%), Postives = 153/195 (78.46%), Query Frame = 3 
Query:  189 MDTLLGISGEGFVVIAADAQVARSILLYQSNVDKISQLTEDKILACAGPRSDCVNFSEYISKNIALYELNNSVKLGTKATANFIRGELAAAIRKGPIQAQLLMGGVDKREGGKGSAALYWLDYLGTMQQVPYGAHGYGANFTLSVMDRDYIKGLSLDEALSIIDKCIKELHTRFLISQKNFVIKVVTADGIKVIR 773
            MD+L G++G+GFVV+AADAQVARSILLYQ+++DKI +L   K++A AGP++DC  F EYI KN+ALYELNN ++L TKA AN+IR ELA A+RKGP Q  +LMGGVD      G+AALYWLDYLGT+Q V YGA GYGA FTLS++DR Y  G++  +A+ ++  CI  LH RFLI+Q NFVIKVV  DGI+V++
Sbjct:    1 MDSLFGVAGDGFVVLAADAQVARSILLYQNDLDKIKELDSHKMMALAGPQADCNLFGEYIQKNMALYELNNDLRLSTKAAANYIRRELATALRKGPYQVNMLMGGVDA-----GAAALYWLDYLGTLQPVKYGAQGYGAAFTLSLLDRSYRVGMAEADAVELVRSCIAALHKRFLIAQPNFVIKVVDKDGIRVLK 190
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BLAST of mRNA_F-serratus_M_contig1458.3234.1 vs. uniprot
Match: W7TFQ9_9STRA (Proteasome subunit beta n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFQ9_9STRA)

HSP 1 Score: 227 bits (579), Expect = 7.740e-69
Identity = 112/196 (57.14%), Postives = 150/196 (76.53%), Query Frame = 3 
Query:  183 AIMDTLLGISGEGFVVIAADAQVARSILLYQSNVDKISQLTEDKILACAGPRSDCVNFSEYISKNIALYELNNSVKLGTKATANFIRGELAAAIRKGPIQAQLLMGGVDKREGGKGSAALYWLDYLGTMQQVPYGAHGYGANFTLSVMDRDYIKGLSLDEALSIIDKCIKELHTRFLISQKNFVIKVVTADGIKVI 770
            A MDTLLGI G+GFV+IAADA  ARSIL+++++ DKI+ L   K+LA AGP +DC N +EY+ KN+ALYE NN +KLGT A ANFIR  LA A+RKGP Q  LL+GG D+++G    AALY+LDYLG+MQ+V +GA GY +NFTLS+ DR+Y +G++L EA  +++K  KEL  RFLISQ  +++KVV  DG++ +
Sbjct:   43 AAMDTLLGIKGDGFVLIAADASAARSILVFKTDQDKIAALDSHKLLAAAGPNADCSNLTEYVQKNMALYEFNNDLKLGTHAAANFIRRTLATALRKGPYQTNLLLGGFDEKDG----AALYFLDYLGSMQKVNFGAQGYASNFTLSIFDREYREGMTLPEAEVVLEKAKKELAVRFLISQPKWIMKVVDKDGVRTL 234
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BLAST of mRNA_F-serratus_M_contig1458.3234.1 vs. uniprot
Match: K8ZB45_NANGC (Signal peptidase I n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8ZB45_NANGC)

HSP 1 Score: 227 bits (579), Expect = 3.830e-67
Identity = 112/196 (57.14%), Postives = 150/196 (76.53%), Query Frame = 3 
Query:  183 AIMDTLLGISGEGFVVIAADAQVARSILLYQSNVDKISQLTEDKILACAGPRSDCVNFSEYISKNIALYELNNSVKLGTKATANFIRGELAAAIRKGPIQAQLLMGGVDKREGGKGSAALYWLDYLGTMQQVPYGAHGYGANFTLSVMDRDYIKGLSLDEALSIIDKCIKELHTRFLISQKNFVIKVVTADGIKVI 770
            A MDTLLGI G+GFV+IAADA  ARSIL+++++ DKI+ L   K+LA AGP +DC N +EY+ KN+ALYE NN +KLGT A ANFIR  LA A+RKGP Q  LL+GG D+++G    AALY+LDYLG+MQ+V +GA GY +NFTLS+ DR+Y +G++L EA  +++K  KEL  RFLISQ  +++KVV  DG++ +
Sbjct:  171 AAMDTLLGIKGDGFVLIAADASAARSILVFKTDQDKIAALDSHKLLAAAGPNADCSNLTEYVQKNMALYEFNNDLKLGTHAAANFIRRTLATALRKGPYQTNLLLGGFDEKDG----AALYFLDYLGSMQKVNFGAQGYASNFTLSIFDREYREGMTLPEAEVVLEKAKKELAVRFLISQPKWIMKVVDKDGVRTL 362
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BLAST of mRNA_F-serratus_M_contig1458.3234.1 vs. uniprot
Match: A0A7S2XJE8_9STRA (Proteasome subunit beta n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XJE8_9STRA)

HSP 1 Score: 221 bits (563), Expect = 6.380e-67
Identity = 113/194 (58.25%), Postives = 144/194 (74.23%), Query Frame = 3 
Query:  189 MDTLLGISGEGFVVIAADAQVARSILLYQSNVDKISQLTEDKILACAGPRSDCVNFSEYISKNIALYELNNS-VKLGTKATANFIRGELAAAIRKGPIQAQLLMGGVDKREGGKGSAALYWLDYLGTMQQVPYGAHGYGANFTLSVMDRDYIKGLSLDEALSIIDKCIKELHTRFLISQKNFVIKVVTADGIKV 767
            MDT+ G+S EG VVIAAD   ARSIL YQSN+DK+++L+    +  AGP SD VNF++YI+KN  LYEL+N  ++L T A ANF RGELA A+RKGP Q  +L+GG D+  GG    +LY+LDY+G MQ+VPYG  GY   F LSVMDR + KGL   EA++I++KCI+EL TRFLISQ NF+IKV+  DG+KV
Sbjct:    1 MDTVFGVSYEGGVVIAADQSNARSILTYQSNLDKVTELSSHSAMGVAGPNSDLVNFTQYIAKNFKLYELSNDGMQLSTAAQANFCRGELATALRKGPFQVNVLLGGFDEGVGG----SLYFLDYMGAMQKVPYGCQGYAGAFCLSVMDRQWTKGLDEAEAVAIVEKCIQELKTRFLISQPNFMIKVINKDGVKV 190
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BLAST of mRNA_F-serratus_M_contig1458.3234.1 vs. uniprot
Match: B7FVS5_PHATC (Proteasome subunit beta n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FVS5_PHATC)

HSP 1 Score: 217 bits (553), Expect = 1.940e-65
Identity = 104/193 (53.89%), Postives = 142/193 (73.58%), Query Frame = 3 
Query:  189 MDTLLGISGEGFVVIAADAQVARSILLYQSNVDKISQLTEDKILACAGPRSDCVNFSEYISKNIALYELNNSVKLGTKATANFIRGELAAAIRKGPIQAQLLMGGVDKREGGKGSAALYWLDYLGTMQQVPYGAHGYGANFTLSVMDRDYIKGLSLDEALSIIDKCIKELHTRFLISQKNFVIKVVTADGIKV 767
            MDT+ G+  EG V++AAD   ARSILLYQ+N+DK+ +LT    +  +GP  D VNF E+++KNI LYEL+N +KL T A ANF RGELA A+RKGP Q   L+GG D + G    A+LY+LDY+  +Q+V YG+ GY +NF LS+MD++Y   L+  +A+ I+++CI ELHTRFLISQKNF+IKVV  DG+++
Sbjct:    1 MDTVFGVQYEGGVILAADQSNARSILLYQTNLDKVKELTSHSAMGVSGPNCDMVNFCEFVAKNIKLYELSNDIKLSTHAQANFARGELATALRKGPFQVNTLLGGFDNKVG----ASLYYLDYMAALQKVNYGSQGYASNFCLSIMDKEYRDDLNEADAVKIVEQCIHELHTRFLISQKNFIIKVVDKDGVRL 189
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BLAST of mRNA_F-serratus_M_contig1458.3234.1 vs. uniprot
Match: A0A7S2FKQ2_9STRA (Proteasome subunit beta n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKQ2_9STRA)

HSP 1 Score: 217 bits (553), Expect = 3.360e-65
Identity = 106/196 (54.08%), Postives = 144/196 (73.47%), Query Frame = 3 
Query:  189 MDTLLGISGEGFVVIAADAQVARSILLYQSNVDKISQLTEDKILACAGPRSDCVNFSEYISKNIALYELNNSVKLGTKATANFIRGELAAAIRKGPIQAQLLMGGVDKREGGKGSAALYWLDYLGTMQQVPYGAHGYGANFTLSVMDRDYIKGLSLDEALSIIDKCIKELHTRFLISQKNFVIKVVTADGIKVIRA 776
            MDT+LGI G+GF +I AD   ARSI+++    DKI++L   KI+  +GP+ D  NF+EYI KN+ LYELNN +KL T ATANF+R +LA A+RKGP Q  +L+GG D+  G    A+LY+LD    +  V +GAHGY +NF LS+ DR+Y +G+S++EA ++IDKCI ELHTRFLISQ NF+IK+V  DG++V+ A
Sbjct:   25 MDTVLGIKGDGFTMIVADRTSARSIMVFNQAEDKITELDSHKIIGQSGPQCDTANFAEYIQKNMTLYELNNDMKLSTFATANFMRRQLATALRKGPYQTNILLGGYDEGAG----ASLYFLDLYSALTPVNFGAHGYASNFCLSIFDREYKEGMSVEEAKAVIDKCIAELHTRFLISQPNFLIKIVDKDGVRVMEA 216
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BLAST of mRNA_F-serratus_M_contig1458.3234.1 vs. uniprot
Match: A0A6U4C0Y9_9STRA (Proteasome subunit beta n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4C0Y9_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.980e-63
Identity = 100/194 (51.55%), Postives = 145/194 (74.74%), Query Frame = 3 
Query:  189 MDTLLGISGEGFVVIAADAQVARSILLYQSNVDKISQLTEDKILACAGPRSDCVNFSEYISKNIALYELNNSVKLGTKATANFIRGELAAAIRKGPIQAQLLMGGVDKREGGKGSAALYWLDYLGTMQQVPYGAHGYGANFTLSVMDRDYIKGLSLDEALSIIDKCIKELHTRFLISQKNFVIKVVTADGIKVI 770
            MD+ +G+ G+GFV++AADA   RSIL+Y+ ++DKI  ++E++I+A  GP++DC  F EYI KN+ LYEL N + L T   ANFIRGELA A+R+GP Q  LL+GG  K E     A+L+W+DYLGT+Q+V YGAHGY +NF LS++D  + KGL+ ++A+ ++ KCIKEL TRF+I+   + +KVV ++G++VI
Sbjct:   44 MDSTIGMRGDGFVLLAADANAGRSILIYKQDLDKILPISENQIMATVGPQADCSVFGEYIQKNMRLYELENQINLSTFGAANFIRGELAKALRRGPYQVNLLLGGAAKDE----EASLFWMDYLGTLQKVNYGAHGYASNFVLSLLDAHWEKGLTEEQAIEVLRKCIKELETRFMIALPKWSVKVVDSEGVRVI 233
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BLAST of mRNA_F-serratus_M_contig1458.3234.1 vs. uniprot
Match: A0A6V1PTT6_HETAK (Proteasome subunit beta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PTT6_HETAK)

HSP 1 Score: 211 bits (536), Expect = 5.370e-63
Identity = 108/194 (55.67%), Postives = 140/194 (72.16%), Query Frame = 3 
Query:  189 MDTLLGISGEGFVVIAADAQVARSILLYQSNVDKISQLTEDKILACAGPRSDCVNFSEYISKNIALYELNNSVKLGTKATANFIRGELAAAIRKGPIQAQLLMGGVDKREGGKGSAALYWLDYLGTMQQVPYGAHGYGANFTLSVMDRDYIKGLSLDEALSIIDKCIKELHTRFLISQKNFVIKVVTADGIKVI 770
            MD L G+ G+G+V++AADA   RSI++Y+S+ DKI  L  +K+LA AGP +D VNF EYI KN+ALYEL N +KL T ATA+FIR  LA A+RKGP Q  LL+GG D+   GK    LYW+DYLG M ++ +GAHGYG++FTLS+ D ++ +GLS  E L II  CI EL TRFLIS   FV K+V A+G++ I
Sbjct:    1 MDALFGLKGDGYVMLAADANQGRSIIVYKSDYDKIMPLDSNKLLAQAGPNADTVNFGEYIQKNLALYELTNDLKLNTSATAHFIRRTLADALRKGPYQTNLLLGGKDE---GK-DPELYWMDYLGAMHKLNFGAHGYGSSFTLSIFDSEWREGLSEAEGLEIIRHCIAELRTRFLISMPKFVCKIVDANGMREI 190
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BLAST of mRNA_F-serratus_M_contig1458.3234.1 vs. uniprot
Match: A0A7S3Q3G3_9STRA (Proteasome subunit beta n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q3G3_9STRA)

HSP 1 Score: 209 bits (532), Expect = 2.840e-62
Identity = 107/202 (52.97%), Postives = 146/202 (72.28%), Query Frame = 3 
Query:  189 MDTLLGISGEGFVVIAADAQVARSILLYQSNVDKISQLTEDKILACAGPRSDCVNFSEYISKNIALYELNNS-VKLGTKATANFIRGELAAAIRKGPIQAQLLMGGVDKREGGKGSAALYWLDYLGTMQQVPYGAHGYGANFTLSVMDRDYIKGLSLDEALSIIDKCIKELHTRFLISQKNFVIKVVTADGIKVIR--APPA 785
            MDT+ G+  +G V++AAD   ARSIL YQSN+DKI+QL+    L  +GP SD VNFSEY+SKN ALY+L+N  + L T A AN+ R ELA A+RKGP Q   L+GG D    GKGS  LYW+DYL  + +V YG  G+ ++F LS+MDR +++GL+ ++A++I+DKCIKEL  RFLI+Q NF+IKV+  DG++ ++  A PA
Sbjct:    1 MDTVFGVQFDGGVILAADQSNARSILTYQSNLDKITQLSSHSALGVSGPNSDLVNFSEYVSKNFALYQLSNDGLPLSTHAQANYCRNELAVALRKGPYQVNCLLGGYDTSI-GKGS--LYWMDYLAALSKVNYGCQGHASSFCLSIMDRHWVEGLTQEKAVAIVDKCIKELEVRFLIAQPNFLIKVIDKDGVRTLKFGADPA 199
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1458.3234.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF06_ECTSI7.090e-11278.10Proteasome subunit beta n=1 Tax=Ectocarpus silicul... [more]
A0A836CPT6_9STRA1.820e-7561.54Proteasome subunit beta n=1 Tax=Tribonema minus Ta... [more]
W7TFQ9_9STRA7.740e-6957.14Proteasome subunit beta n=1 Tax=Nannochloropsis ga... [more]
K8ZB45_NANGC3.830e-6757.14Signal peptidase I n=2 Tax=Monodopsidaceae TaxID=4... [more]
A0A7S2XJE8_9STRA6.380e-6758.25Proteasome subunit beta n=1 Tax=Attheya septentrio... [more]
B7FVS5_PHATC1.940e-6553.89Proteasome subunit beta n=2 Tax=Phaeodactylum tric... [more]
A0A7S2FKQ2_9STRA3.360e-6554.08Proteasome subunit beta n=1 Tax=Florenciella parvu... [more]
A0A6U4C0Y9_9STRA1.980e-6351.55Proteasome subunit beta n=2 Tax=Phaeomonas parva T... [more]
A0A6V1PTT6_HETAK5.370e-6355.67Proteasome subunit beta n=1 Tax=Heterosigma akashi... [more]
A0A7S3Q3G3_9STRA2.840e-6252.97Proteasome subunit beta n=1 Tax=Chaetoceros debili... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1458contigF-serratus_M_contig1458:153329..159512 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score335.5
Seed ortholog evalue1.8e-89
Seed eggNOG ortholog2880.D8LF06
Preferred namePSMB2
KEGG koko:K02734,ko:K08471,ko:K12847,ko:K18626
KEGG Pathwayko03040,ko03050,map03040,map03050
KEGG ModuleM00337,M00340,M00354
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000502,GO:0003674,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005829,GO:0005839,GO:0005886,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007088,GO:0007346,GO:0008047,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009893,GO:0009896,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0010499,GO:0010564,GO:0010604,GO:0010638,GO:0010950,GO:0010952,GO:0010965,GO:0012505,GO:0014070,GO:0016020,GO:0016504,GO:0016579,GO:0019222,GO:0019538,GO:0019774,GO:0019941,GO:0030071,GO:0030162,GO:0030163,GO:0030234,GO:0031090,GO:0031323,GO:0031325,GO:0031331,GO:0031597,GO:0031974,GO:0031981,GO:0031984,GO:0032268,GO:0032270,GO:0032436,GO:0032501,GO:0032504,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034515,GO:0036211,GO:0042175,GO:0042221,GO:0043085,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0043687,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0048046,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0051603,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0052547,GO:0052548,GO:0060255,GO:0061133,GO:0061134,GO:0061135,GO:0062033,GO:0065007,GO:0065009,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071944,GO:0080090,GO:0090068,GO:0098588,GO:0098772,GO:0098805,GO:0098827,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:2001252
EggNOG free text desc.threonine-type endopeptidase activity
EggNOG OGsCOG0638@1,KOG0177@2759
Ec32 ortholog descriptionNucleophile aminohydrolases, N-terminal
Ec32 orthologEc-21_006230.1
EC3.4.25.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03041,ko03051,ko04030,ko04812
Exons5
Model size1315
Cds size639
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929442.1875956-UTR-F-serratus_M_contig1458:153328..1535161622929442.1875956-UTR-F-serratus_M_contig1458:153328..153516Fucus serratus maleUTRF-serratus_M_contig1458 153329..153516 +
1690962854.1406858-UTR-F-serratus_M_contig1458:153328..1535161690962854.1406858-UTR-F-serratus_M_contig1458:153328..153516Fucus serratus maleUTRF-serratus_M_contig1458 153329..153516 +
1622929442.3213475-UTR-F-serratus_M_contig1458:159024..1595121622929442.3213475-UTR-F-serratus_M_contig1458:159024..159512Fucus serratus maleUTRF-serratus_M_contig1458 159025..159512 +
1690962854.2037148-UTR-F-serratus_M_contig1458:159024..1595121690962854.2037148-UTR-F-serratus_M_contig1458:159024..159512Fucus serratus maleUTRF-serratus_M_contig1458 159025..159512 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929442.2140336-CDS-F-serratus_M_contig1458:153516..1535481622929442.2140336-CDS-F-serratus_M_contig1458:153516..153548Fucus serratus maleCDSF-serratus_M_contig1458 153517..153548 +
1690962854.153889-CDS-F-serratus_M_contig1458:153516..1535481690962854.153889-CDS-F-serratus_M_contig1458:153516..153548Fucus serratus maleCDSF-serratus_M_contig1458 153517..153548 +
1622929442.228868-CDS-F-serratus_M_contig1458:157590..1578191622929442.228868-CDS-F-serratus_M_contig1458:157590..157819Fucus serratus maleCDSF-serratus_M_contig1458 157591..157819 +
1690962854.166514-CDS-F-serratus_M_contig1458:157590..1578191690962854.166514-CDS-F-serratus_M_contig1458:157590..157819Fucus serratus maleCDSF-serratus_M_contig1458 157591..157819 +
1622929442.2439773-CDS-F-serratus_M_contig1458:158025..1581511622929442.2439773-CDS-F-serratus_M_contig1458:158025..158151Fucus serratus maleCDSF-serratus_M_contig1458 158026..158151 +
1690962854.1786249-CDS-F-serratus_M_contig1458:158025..1581511690962854.1786249-CDS-F-serratus_M_contig1458:158025..158151Fucus serratus maleCDSF-serratus_M_contig1458 158026..158151 +
1622929442.2861326-CDS-F-serratus_M_contig1458:158502..1586671622929442.2861326-CDS-F-serratus_M_contig1458:158502..158667Fucus serratus maleCDSF-serratus_M_contig1458 158503..158667 +
1690962854.1873739-CDS-F-serratus_M_contig1458:158502..1586671690962854.1873739-CDS-F-serratus_M_contig1458:158502..158667Fucus serratus maleCDSF-serratus_M_contig1458 158503..158667 +
1622929442.3029804-CDS-F-serratus_M_contig1458:158937..1590241622929442.3029804-CDS-F-serratus_M_contig1458:158937..159024Fucus serratus maleCDSF-serratus_M_contig1458 158938..159024 +
1690962854.1955152-CDS-F-serratus_M_contig1458:158937..1590241690962854.1955152-CDS-F-serratus_M_contig1458:158937..159024Fucus serratus maleCDSF-serratus_M_contig1458 158938..159024 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1458.3234.1prot_F-serratus_M_contig1458.3234.1Fucus serratus malepolypeptideF-serratus_M_contig1458 153517..159024 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1458.3234.1

>prot_F-serratus_M_contig1458.3234.1 ID=prot_F-serratus_M_contig1458.3234.1|Name=mRNA_F-serratus_M_contig1458.3234.1|organism=Fucus serratus male|type=polypeptide|length=213bp
MDTLLGISGEGFVVIAADAQVARSILLYQSNVDKISQLTEDKILACAGPR
SDCVNFSEYISKNIALYELNNSVKLGTKATANFIRGELAAAIRKGPIQAQ
LLMGGVDKREGGKGSAALYWLDYLGTMQQVPYGAHGYGANFTLSVMDRDY
IKGLSLDEALSIIDKCIKELHTRFLISQKNFVIKVVTADGIKVIRAPPAP
DMGEAAEEAKKE*
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mRNA from alignment at F-serratus_M_contig1458:153329..159512+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1458.3234.1 ID=mRNA_F-serratus_M_contig1458.3234.1|Name=mRNA_F-serratus_M_contig1458.3234.1|organism=Fucus serratus male|type=mRNA|length=6184bp|location=Sequence derived from alignment at F-serratus_M_contig1458:153329..159512+ (Fucus serratus male)
TTTCGGAGCGGCCAGCAACATAATCCCCTTAGGAATCCGCGCTTCAGTAT
ATTGATCTGATAACATACATTCAGAGTGTCTTCTACGGTCGTACCAAGGA
GGAATCGGCAACCGGATCAGTAAAATTCAACGTGGAAGCTTTAGCCGAGA
CAGCAGGCAAAAACTCGTAGCTCGCCTCTTGGGCCATCATGGACACCTTG
CTGGGTATCTCCGGGGAAGGGTAAGCACGGGAGATCGTTGCCGGAGATAA
ATCAAATAATCCCAGACATAGCTCGTTGTGCGATTTAAGTTTCTTTGTTA
TGGCAACAGCGCCTCCCGACAGCATCTCTGGCCAATGTGTCTTCTCTACG
TCGTAGTGACCACTTTGTTCTGTACGCATTACATATTATACCTGTACCAG
TATACTACCTTTTCTGGTCCACGACGCGTGTGAATAAATGCAATAAATGG
ACGCCGCCGCGGAACTCGGGAGGAATCCCACAAGTAAGCACCAGATTCAG
CCTGAGTACGGAGATGACCAGGCTGCCGCGGGACGGGACGGCTGAACCCG
TCTCGCGAGACAAAACTCTCAGGCACGCACGGGGACAGGGGAATATTCCT
TTTCCCTGTTCAGCTGACCACGAGCAGGATTGGCAACCTTACCCGGTTGA
TCCAAACTCTGCGACATGTGATGACCATACATACGTACATACATACATAC
AGCTACTCGCAGTAGAGCGTCAATGTTTGTAAAGTACCTGGTACTCAACT
CGAAGGTAGTAATATTAATAGTACGAAAACAGCCCCCGGAATACAGACAG
CAGTACCACCAATTGTGAATCCTCGTACGAATATGTTTATGCCGAGTTCC
CTTGCTCTAGAGTTTTACTCGTACTCCCGCAATGGTCTCACACACTTAGA
CCACTTCTTATGGACAAATAATATGTTCCGGCGAAGAATAGTGTAGACTA
GACTATATTTCTATTAAATACCTGGTAGAGCTCTCGTCCGATACAGACAG
TATCCGCTTTTTGTACCAGGTATCTATGAAAAGTATCTGCCACTTTTATA
AGTTTTACCACAGATGGTGAGCGTGGACAATATTTTTCCTGGTTTTGCAG
GCTGTTGGGAAACGAGGAGAGACGTGTATCAAAGTGGGTACAACCGGAAT
CTCAAACCACAACGGAAATAGTATGTGGTAATCCAAGCAACAGCTGCGCC
ATCGCTAACAGCGGTACTCTACTCTCCTTATTATTCAAGTAGTCTACACG
TAGCTCTCAGCCCCACGAAAACCTTCCAAATCTGGCACTCGTAAGTCAGT
ATACCAAATAGGGTGCAATCACGTCGCACTATTTTAAAACTAGAAACGTT
GCTTTGGGGGTCTGTTACTGATTGTTTTGTACGCGTTACTTCTTTGAGCG
AAGCACTTGCTTTCCAACACCAAGCGTGGCTGTGGTCTCGTAGCAACAAC
AGAAGACACCACGATATATCGACCACCATGCAAGCATGCGATCTTTAAAG
AAAAACCAGAACGCGCCTATACCTTCTGAGCATCCTCCAGTCAGAAGAAA
AAATGTCAAAACGTTTAGGTGGGATCAAAGGCTGCAAATACAAAACCTCT
TCCTGTAGCGCTTATGATTAATACTGGTAGTAGGCTGAGGCATCTATTCT
TGAGCGAGCCCTGGTGTTGAAAGCAGTCCAAGAACTTTTGATGACCTATG
TACGATCGCCTGAACCCACTCACTTCTTCAAAGCCCGGAAGCTCAAATTC
GTTTCTCGCGAGCATCCAGAACGTAAAGCGAGAGGCTAGCCTAATTGTCC
CACCAGGAGGCCGAGCAGTCTCAAGCGTGAATCCTACCTAACTCGCGCCC
TATCACGATGCAACCCGGCAACTTTCGCCGAGAACCGCTGCCGTGGTCGT
GACGGTATTCAGGTGCTGTATCACCATCTTTCAAGCAGCTATCGTCTCGA
CGTTGTCCATGTTCTAGGTTTTAGAATTCCGTACGAAGTATCTTTGTACT
ACGTGTATACGCCGGTACTTTCATCGTGCCCACTTCCTACCAATAGTAGG
TGTGGGAAAGAGAGGCGTATACTAATTGGTCCATGGTGACCTGCCAAGGC
AGCACTCGTTCGGAACTACCTTGAGGTTTACTGGCCCTGTGCCGGTGGAC
TCTCGGCAGCGAATGCCATCGGTACGCAATTGCGTGACCCGATAAACTCG
GGACTGACCCAATGGTGTTTGGCGGTATAATATATATATATATGGACGCC
GCCGCGGAACTCGGGAGGAATCCCGTGAGTAAGCACCAGATTTAGCGTTA
GTGTGGATAATAAGAAGGCTGACGCGGGGACGGGACCGCCGAACCCGTCT
GGCGAGACCAAATTCTCATGCGCGAACGTGGACAGGGAAATATATTTTTA
CCTTGTCTAGGTGGCCACGAGCAGGATTGGCAACCTTACCCGGTCGATCA
ATACCCTTGCTATATGTGTGACCATACATTGTATACTCGGAGTATTGTAC
CAGGTATTGACTAAAATTACGAAAGAATACAGTAGTTTGAAAAAAATCAC
GCCCGGCTATGGGAGCGTCAACGACCTGACTCAAAATCGTTGACAATTTC
GAGAACCTCATGGGCAAATACAAAATTCGTCCACGAAATCTTCCGATTGT
TGACCATAATGTGGGCTGTCATTTTTTTTCCCCGTCACCGATGTGCCCAC
AACCCTCTCCACCCCTGCCGAGCGAGAATGGTCTCTACGTGCAACAGCCC
GATGGTTCCCACAAACGAAAAGATCAGCGCTCTTCAGTACCGAGAGGGCT
CAAAGCCTGCGACGAGGGCACAGACCATGATATTATGTAGCTTAGCTCGA
GTTTTTGGGTGTGAGGGCACTCCCTTCCTAGCGAGGTCCACTCTTGTTGC
GAGCGAGCGTGCGTGTAGACTATGTGTCATGCGTGCGTTTTTATTTTATG
GGTTCCCCGCGAGTCTCAACGCCCTACCTATCCTTTTCGGTATTTGCTTT
TTGTTTTTCTTTGCTTTCTTTTTGGCGTTCTTGGCTTGTTTTTGTCTTTT
GTGCTCTCGTTAGATCTGTGTAGGTGTTGCTCTGAACTTTTCCTGTCCAG
CAGACCACGTGCCGGATTGACAACCGCGTATCTTGTTGGTTATGGTTGAG
ACCCGATCAGTTAATGTTAAGAATATACACACACACACATACACTTAGAC
TATGTGCGAAGTTTATTCAGTACCAGGTACTATTTAGTGTTTACTCCTTT
AGTATAACTGACTTGTTGCTGTACCCCGATTCTGGTTTTGTTGCAAACCG
CGTTGCTAAATATGATCTCACACACAAAATAATCTCGTCTCTCCAGCTAT
TGCTCTGCGGTAGCTGTACGGCACGAGTCATGCGGACTGCGGCTTTTGCG
CGTCGTCTGACATTTCAGATCAGTACCGTAGGTGTGACGAGAGTGCCGGG
ATTTATACTACGGTGGGTGCTCTCGGCAAGCACTTTAGAGGTTGAAAATG
TGCCCTGAAAAGTTTGAATTTCGGATTCAACATGAGTCCATTTTTTGTAC
GATTTGGCATGTTTTTGACTGCCAAGACCGCGGCCCTTAAAAGAGAGGCC
GCAGTATCGATGGAAACTCAACTCGTGAAGTGAAATGATCTTGAGGACTT
TTAGAAGATTTCGACTGTTCTTGTTTTCCTGTCAAGTCTGGAGAGAACCA
CCTTTTCCCCCCTTTGTTTTGCTTTGTTTTGCTCCAAAAAGCCTGTGGAT
GGCCATTAGGCGATCGAAAGATGTTGTCCTCCGTGATGAACCAAAAGTAC
GGTACATGGCAAGACAGACGGCACTACGAAGGTTCAATCGCAACCGTCCA
TGCCCTTTTATATATTTGCGCCTACACGTGCAAACAGTATCCTTTATTCC
CATTTGAAGTATCCCCTATCCCCGTGTCGCACTGGTTTGGCGCTAATCTG
ACAAAAGTACTACCAGTACGTATTTTTATTGGTATGAGAATACTAGTCGA
GGTCTGCACAGTTTGCAAAACTTGATGTGTGTGTGTGTTTGTGTGCGTTG
TCATCCCGTTTATTTTAGATGTCAGACTTGTGGACGCACCAGCCGGGGTC
ACTCAGGAGGAAGATTGCACAGGATTTATCCCCCTTCCTTCTGCGGTGCT
TGCAAGTGTAGGCGTCGAACTTACTTGAACTTGAGTGATACAGCAGCAAT
TAACTCCAAGTACATCTCCCCTGACGGACTGATACAACAAGGCCTTGGTA
AAATTGTGACAGGTTTGTGGTCATTGCGGCGGACGCCCAAGTGGCGCGTT
CTATCCTCCTGTACCAGAGCAATGTGGACAAGATATCCCAACTTACGGAG
GACAAGATTCTCGCTTGCGCCGGGCCTCGGTCCGACTGTGTTAACTTCAG
CGAGTATATCTCCAAGAACATCGCGCTCTACGAGCTCAACAACAGCGTGA
AGCTCGGCACCAAAGCGACCGCCAATTTCATCAGGGGCGAGGTGAACGGG
GAGGACTGGCCACACCAGCGAGACATGTATTTTAACACGGATCGCTTTAA
AGGCACTCCGTATAGTTACATTGTCCGTAGTGACTCGGGCTTCGCGATGC
CGTAGGTTTCTCCTCTGACTCGTGGGTTCAGCTCCTTCGATTGTGTGCAT
ATATGTGCACCTTAGTTCATCCTGTGTCCTGTTTCGTGATTATACAGCTT
GCGGCCGCCATCCGGAAAGGACCGATCCAGGCGCAGCTTTTGATGGGGGG
TGTCGACAAGCGGGAAGGAGGCAAGGGCAGCGCCGCTTTGTATTGGCTGG
ATTACCTCGGAACCATGCAACAGGTGCAATACGGTACAGTACATTGCCTT
GCGCTTTTATAATGTGGGACTTGTGAGCCACCTCCATGCGGCCTCCCACT
TTTGTGTGAAAACCGATAAGGAACGTATGCGAAGCAGGCTGGACACCAGT
GTTGTATAGGTGGGTCCAACAACCCAGGTTGGCACACTTAATGATCAGGG
CACCATCTGCATGCATTGCCATGATGTTTTGAAGGCGATATCACCTGTTC
GCTTGGATGTCAGAGCTACTCCTTTTCTTTCACTGAATGTATGTATGGCT
ATCACCCGGTACGGTTACCAATCCATCTCGTGGTCAGCTGACATAACTTA
CTGCATGGTGTCTGCTCGACCAAGGTACCGTACGGCGCCCACGGATATGG
GGCGAATTTCACGCTGTCCGTGATGGACCGGGATTACATCAAGGGCTTGA
GCTTGGATGAGGCGTTATCCATCATCGACAAGTGTATCAAGGAGTTGCAC
ACACGCTTCCTCATCTCGCAGAAAAACTTCGTCATCAAGGTATTACGATA
CAATCACACACCGGTAACTTTTTCCAGCCTCAAGCCTCAGTTTTAGGTCT
ACACACGAAACGATAGTTGTATTACTGATAATTCTGTAGTACTCCTGGGG
GCTGGGTTGTATAAGGTGAATCGGTAATGGGAGTCCCATCTTTGGTGGGT
TGCGTTCTCTAAATACGATCGCGGTGGTTGAGTAAACAAGTGTTTTGATC
GTCCACGGGATATTGACTGAACCATCCACCCGCCCGGTTGTTCGGTGTTC
AATCGGTAGGTGGTGACGGCGGACGGTATCAAGGTTATCCGGGCTCCCCC
AGCACCCGACATGGGCGAAGCCGCAGAAGAGGCGAAGAAGGAATAGGCCC
AAGGGTTCCGTTCGACAAGGAAGGACATTCGTTTCCAGTTCTCGCAAGAA
AGCTGGTCCTTGGGTTTTAGGGGGAGGGTACATGTCGAATGATGGCTGTT
CGGCCTACGTTTGTTGGTTGAACAGTACTCGTATGGGATGGGAGTAGACG
CTAAATTTCGTGGGTGTTGGTTATCGGATACTGCAGTAGATACCGCGCGA
TCTCTCAAGTTCAGGCGAAGGTTTGGCGTGATTCTTCAAACCGGCTTTTT
TTCTTCACAAAACTTTTAATACCTCAGGACTGGTACAGTAGTAATTGCCA
CGTTGAAGATCCCTAGACCTCGTTGTAACCCCCAGAACCAAATATGATAC
CATAGTACAAACACTTTCGCGTGTACTGGTACACCGTAAGGTATGTGCGA
TGGTCGATGGTGTCACACACAAAAGAGACGCGAGGCGAGGGTCATCAATT
CCGCGTTGAGCGCGACGTCCATAAACAAGGGGCT
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Coding sequence (CDS) from alignment at F-serratus_M_contig1458:153329..159512+

>mRNA_F-serratus_M_contig1458.3234.1 ID=mRNA_F-serratus_M_contig1458.3234.1|Name=mRNA_F-serratus_M_contig1458.3234.1|organism=Fucus serratus male|type=CDS|length=1278bp|location=Sequence derived from alignment at F-serratus_M_contig1458:153329..159512+ (Fucus serratus male)
ATGGACACCTTGCTGGGTATCTCCGGGGAAGGATGGACACCTTGCTGGGT
ATCTCCGGGGAAGGGTTTGTGGTCATTGCGGCGGACGCCCAAGTGGCGCG
TTCTATCCTCCTGTACCAGAGCAATGTGGACAAGATATCCCAACTTACGG
AGGACAAGATTCTCGCTTGCGCCGGGCCTCGGTCCGACTGTGTTAACTTC
AGCGAGTATATCTCCAAGAACATCGCGCTCTACGAGCTCAACAACAGCGT
GAAGCTCGGCACCAAAGCGACCGCCAATTTCATCAGGGGCGAGGTTTGTG
GTCATTGCGGCGGACGCCCAAGTGGCGCGTTCTATCCTCCTGTACCAGAG
CAATGTGGACAAGATATCCCAACTTACGGAGGACAAGATTCTCGCTTGCG
CCGGGCCTCGGTCCGACTGTGTTAACTTCAGCGAGTATATCTCCAAGAAC
ATCGCGCTCTACGAGCTCAACAACAGCGTGAAGCTCGGCACCAAAGCGAC
CGCCAATTTCATCAGGGGCGAGCTTGCGGCCGCCATCCGGAAAGGACCGA
TCCAGGCGCAGCTTTTGATGGGGGGTGTCGACAAGCGGGAAGGAGGCAAG
GGCAGCGCCGCTTTGTATTGGCTGGATTACCTCGGAACCATGCAACAGCT
TGCGGCCGCCATCCGGAAAGGACCGATCCAGGCGCAGCTTTTGATGGGGG
GTGTCGACAAGCGGGAAGGAGGCAAGGGCAGCGCCGCTTTGTATTGGCTG
GATTACCTCGGAACCATGCAACAGGTACCGTACGGCGCCCACGGATATGG
GGCGAATTTCACGCTGTCCGTGATGGACCGGGATTACATCAAGGGCTTGA
GCTTGGATGAGGCGTTATCCATCATCGACAAGTGTATCAAGGAGTTGCAC
ACACGCTTCCTCATCTCGCAGAAAAACTTCGTCATCAAGGTACCGTACGG
CGCCCACGGATATGGGGCGAATTTCACGCTGTCCGTGATGGACCGGGATT
ACATCAAGGGCTTGAGCTTGGATGAGGCGTTATCCATCATCGACAAGTGT
ATCAAGGAGTTGCACACACGCTTCCTCATCTCGCAGAAAAACTTCGTCAT
CAAGGTGGTGACGGCGGACGGTATCAAGGTTATCCGGGCTCCCCCAGCAC
CCGACATGGGCGAAGCCGCAGAAGAGGCGAAGAAGGAATAGGTGGTGACG
GCGGACGGTATCAAGGTTATCCGGGCTCCCCCAGCACCCGACATGGGCGA
AGCCGCAGAAGAGGCGAAGAAGGAATAG
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