mRNA_F-serratus_M_contig1452.3219.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1452.3219.1 vs. uniprot
Match: D8LI01_ECTSI (Haloacid dehalogenase-like hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI01_ECTSI) HSP 1 Score: 430 bits (1106), Expect = 3.160e-141 Identity = 225/346 (65.03%), Postives = 268/346 (77.46%), Query Frame = 2
Query: 299 RDEDDGFAAMEWPAPNPSQVFVAHARDGRRYEPGADISVAATRATTAAATAVGGGVDEEDAPRIRMVVTDLDGTLLGPDKKVSARTLEVVRRARAKGIIFVPASGRSKAGMFSAMEELGEELKRDGAPFICMNGLTVYGQG--NGSHGKIIYSEVMCAKLAAKVVGFWRSHPLAKAAGVSLCGSEGDTVVVERLDDRTRGYAGCLEPLPVEVGDMMDAIDAGMKLNRLIFFGATRPAVDAFKDDLTEHLKDHPAELTRGVPEMIEVLPPGASKAVGLKALLKEMNIRPEEVVALGDEENDVEMLRAVGHGVAMGQASLDIRKAARYTAPSHALHGVAVAIETFCSV 1330
+D+D G WPAP+PSQ +VA AR G+RYE V+ A RIR VV+DLDGTLLGPDK VS TLE VR+ARAKGIIFVPASGRSK GM S M ELG+EL+RDG+P +CMNGLTVYGQG NG G+II+SE+MC +LAA+VV FW++HPLA+AAGVSLCGSEG+T+VVE LD RT + EPLP EVG +AI GM LNRL F+G TR AVDAF++DL EHL+DHPAELTRGVPEMIEVLP GASKAVGL+ALLK + + PEEV+A+GD ENDVEMLR+VGHG+AMGQASL++R+AAR+TAP++ LHGVAVA+ETFC +
Sbjct: 209 KDDDKG-----WPAPHPSQAYVAKARCGQRYEH---------------------DVETGGATRIRAVVSDLDGTLLGPDKLVSPTTLEAVRKARAKGIIFVPASGRSKLGMISVMGELGQELQRDGSPIVCMNGLTVYGQGDGNGDLGEIIHSELMCPELAARVVAFWKAHPLAEAAGVSLCGSEGETIVVETLDPRTSSFPDWGEPLPKEVGSWQEAIAGGMGLNRLYFWGPTRAAVDAFEEDLKEHLQDHPAELTRGVPEMIEVLPHGASKAVGLEALLKTLGVSPEEVIAVGDMENDVEMLRSVGHGIAMGQASLEVRRAARFTAPTNELHGVAVALETFCGI 528
BLAST of mRNA_F-serratus_M_contig1452.3219.1 vs. uniprot
Match: A0A6H5J9Y9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Y9_9PHAE) HSP 1 Score: 402 bits (1034), Expect = 3.230e-130 Identity = 221/371 (59.57%), Postives = 264/371 (71.16%), Query Frame = 2
Query: 332 WPAPNPSQVFVAHARDGRRYEPGADISVAATRATTAAATAVGGGVDEEDAPRIRMVVTDLDGTLLGPDKKVSARTLEVVRRARAKGIIFVPASGRSKAGMFSAMEELGEELKRDGAPFICMNGLTVYGQG--NGSHGKIIYSEVMCAKLAAKVVGFWRSHPLAKAAGVSLCGSEGDTVVVERLDDRTR---------GYAGCLEPLPVEVGDMMDAIDAGMKLNRLIFFGATRPAVDAFKDDLTEHLKDHPAELTRGVPEMIEVLPPGASKAVGLKALLKEMNIRPEEV---------------------------VALGDEENDVEMLRAVGHGVAMGQASLDIRKAARYTAPSHALHGVAVAIETFCSV 1330
WPAP+PSQ +VA AR G+RYE V+ A RIR VV+DLDGTLLGPDK VSA T+E VR+ARAKGIIFVPASGRSK+GM SAM ELG+EL+RDG+PF+CMNGLTVYGQG NG G+II+SE+MC +LAA+VV FW++HPLA+AAGVSLCGSEG+T+VVE LD RT G+ C + G +AI GM LNRL F+G TR AVDAF++DL EHLKDHPAELTRGVPEMIEVLP GASKAVGL+ALLK + + PEEV +A+GD ENDVEMLR+VGHG+AMGQASL++R+AAR+TAP++ LHGVAVA+ETFC +
Sbjct: 197 WPAPHPSQAYVAKARCGQRYEH---------------------DVETGGATRIRAVVSDLDGTLLGPDKLVSATTMEAVRKARAKGIIFVPASGRSKSGMISAMGELGQELQRDGSPFVCMNGLTVYGQGDGNGDLGEIIHSELMCLELAARVVAFWKAHPLAEAAGVSLCGSEGETIVVETLDPRTSRKVLGFELFGFWPCDS---LREGSWQEAIAGGMGLNRLYFWGPTRAAVDAFEEDLKEHLKDHPAELTRGVPEMIEVLPHGASKAVGLEALLKTLGVSPEEVRGVSETVNWCRFGVGVGGWRGCMRQEVIAVGDMENDVEMLRSVGHGIAMGQASLEVRRAARFTAPTNELHGVAVALETFCGI 543
BLAST of mRNA_F-serratus_M_contig1452.3219.1 vs. uniprot
Match: A0A836C834_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C834_9STRA) HSP 1 Score: 181 bits (459), Expect = 5.100e-48 Identity = 105/280 (37.50%), Postives = 157/280 (56.07%), Query Frame = 2
Query: 482 PRIRMVVTDLDGTLLGPDKKVSARTLEVVRRARAKGIIFVPASGRSKAGMFSAMEELGEELKRDGAPFICMNGLTVYGQGNGSHGKIIYSEVMCAKLAAKVVGFWRSHPLAKAAGVSLCGSEGDTVVVERLDDR-TRGYAGCLEPLPVEVGDMMDAIDAGMKLNRLIFFGATRPAVDAFKDDLTEHLKDHPAELTRGVPEMIEVLPPGASKAVGLKALLKEMNIRPEEVVALGDEENDVEMLRAVGHGVAMGQASLDIRKAARYTAPSHALHGVAVAIET 1318
P I+ V +D+DGT PD +V R ++ + GI+F PA+G+S+AGM + + G+ LK GAP + + GL VYG G S K+IY ++ A + +V F R +SL GD +V RL+D+ A EP P VG++ +A+ AG+ +++LI V + L A L + +P M+EVLP GASK +G+ LL M + E ++A+GD END+EML+ VAMG A +++K AR+ AP++A G AVA+ET
Sbjct: 65 PEIKAVASDIDGTCTAPDLQVPQRVMDAIVATLDSGIVFFPATGKSRAGMMNTLGPAGDILKARGAPGVYIQGLVVYGPGPDS--KVIYERLLGADIGREVAQFCRDR------NMSLIAYSGDRIVCTRLEDKYVTTIADYHEPFPEAVGEIDEAMAAGLPVHKLIIMAPAEEVVQ--QRPALAQLLGQRASLVQAMPHMLEVLPLGASKGIGVAKLLAHMGFKVENLMAMGDAENDIEMLKMAAVSVAMGNADPEVKKVARFVAPTNAQEGAAVALET 334
BLAST of mRNA_F-serratus_M_contig1452.3219.1 vs. uniprot
Match: D8LI88_ECTSI (Haloacid dehalogenase-like hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI88_ECTSI) HSP 1 Score: 171 bits (432), Expect = 7.430e-44 Identity = 101/277 (36.46%), Postives = 159/277 (57.40%), Query Frame = 2
Query: 488 IRMVVTDLDGTLLGPDKKVSARTLEVVRRARAKGIIFVPASGRSKAGMFSAM-EELGEELKRDGAPFICMNGLTVYGQGNGSHGKIIYSEVMCAKLAAKVVGFWRSHPLAKAAGVSLCGSEGDTVVVERLDDRTRGYAGCLEPLPVEVGDMMDAIDAGMKLNRLIFFGATRPAVDAFKDDLTEHLKDHPAELTRGVPEMIEVLPPGASKAVGLKALLKEMNIRPEEVVALGDEENDVEMLRAVGHGVAMGQASLDIRKAARYTAPSHALHGVAVAIE 1315
+ V +D+DGTL P+ V+ RT + ++ + F PA+G+++ GM+ + E++ LK P + + GL VY +G+ +++Y ++ ++ ++V F GVSL GD +V D T A EP+P VG + DA+ AG+++++LI + + A+D + D+ + D A T+ +P+M+EVLP GASK G+ LLK + I P ++ALGD ENDVEMLR G GV +G AS R AAR+ AP++A G AVA+E
Sbjct: 96 VEAVASDVDGTLTTPEVTVTPRTKDAIKAVLNSELAFFPATGKTRTGMYKILGEDIAAHLKTKDTPGVFIQGLVVY---SGAGDEVLYERLLDVEIVSQVASFCEER------GVSLIAYSGDEIVCSVKDAETDKIALYSEPMPSAVGPLTDAMAAGLRVHKLILMDS-KEAIDRVRPDIERLIGDR-ATFTQALPDMLEVLPAGASKGHGVDVLLKHLGIDPVRLMALGDAENDVEMLRLAGVGVCVGNASPPARAAARFMAPTNANDGSAVAME 361
BLAST of mRNA_F-serratus_M_contig1452.3219.1 vs. uniprot
Match: A0A7S3XQN8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQN8_HETAK) HSP 1 Score: 163 bits (412), Expect = 1.490e-41 Identity = 103/282 (36.52%), Postives = 157/282 (55.67%), Query Frame = 2
Query: 488 IRMVVTDLDGTLLGPDKKVSARTLEVVRRARAKGIIFVPASGRSKAGMFSAMEELGEELKRDGAPFICMNGLTVYGQGNGSHGKIIYSEVMCAKLAAKVVGFWRSHPLAKAAGVSLCGSEGDTVVVERLDDRTRGYAGCLEPLPVEVGDMMDAIDA-GMKLNRLIFFGATRPAVDAFKDDLTEHLKDHPAELTRGVPEMIEVLPPGASKAVGLKALLKEMNIRPEEVVALGDEENDVEMLRAVGHGVAMGQA--SLDIRKAARYTAPSHALHGVAVAIETFC 1324
I + +D+DGTLL ++VS R +E ++RAR KGI+F PA+G+S+ G+++A+ E G+ELK++ P + + GL VY Q +G +I+ ++ + KVV F G+SL D ++ + D T EP P +G + +A+ A G N+LI G + + + E L AE+T+ + M+E+LP G SK G++ LL + + P ++ALGD ENDVEMLR G GVAMG A +L R TA +H GVA A+ +C
Sbjct: 37 ITAIASDIDGTLLNSKQQVSQRNVETIQRARKKGILFFPATGKSRQGVYNALGEFGQELKKENCPGVFLQGLIVYDQ----NGNVIHEMLLPLEPVKKVVQFCTRE------GISLVAYHRDRILCSQRDANTDKLINYCEPTPEAIGPLDEAMVANGQVYNKLIIMGNDEDQITKIRPAM-EALIGEDAEITQAIGYMLEILPKGGSKGDGVRRLLGALGVDPAGLLALGDAENDVEMLRLAGTGVAMGNARPALFAATGGRRTA-THDRDGVARAVGHYC 306
BLAST of mRNA_F-serratus_M_contig1452.3219.1 vs. uniprot
Match: A0A2M8NRE9_9CHLR (Uncharacterized protein n=1 Tax=Phototrophicales bacterium TaxID=2364211 RepID=A0A2M8NRE9_9CHLR) HSP 1 Score: 152 bits (384), Expect = 5.930e-38 Identity = 100/281 (35.59%), Postives = 155/281 (55.16%), Query Frame = 2
Query: 485 RIRMVVTDLDGTLLGPDKKVSARTLEVVRRARAKGIIFVPASGRSKAGMFSAMEELGEELKRDGAPFICMNGLTVYGQGNGSHGKIIYSEVMCAKLAAKVVGFWRSHPLAKAAGVSLCGSEGDTVVVERLDDRTRG--YAGCLEPLPVEVGDMMDAIDAGMKLNRLIFFGATRPAVDAFKDDLTEHLKDHPAELTRGVPEMIEVLPPGASKAVGLKALLKEMNIRPEEVVALGDEENDVEMLRAVGHGVAMGQASLDIRKAARYTAPSHALHGVAVAIETF 1321
+IR+V DLDGTLL P +V+ RT + +R KGI + A+G++ + +E G + P IC+ GL VY NG GKI++ +V+ A +V+ + A+ G G ++++ ++ + EP+P VG + + +D+ + +N++ G R AV A + L + + GVP+M+EVLPPG SK LKALLKE+ + P+ V+A+GD END+EML+ G GVAMGQA ++ AA + S+A G A A+E F
Sbjct: 8 QIRLVAIDLDGTLLNPQSEVTERTDKALRAVLDKGITVIFATGKTYTAVAPLVERFGIKT-----PCICVQGLVVY---NGD-GKIMHQQVLSPAAARQVITY------AEDRGFFALLYSGSRILMKARNEEVEKTLFTRYHEPVPETVGALQNVLDS-VPINKIALVGEPR-AVKALRWQLNAQIGSAVRLMQAGVPQMVEVLPPGTSKGTALKALLKELKVDPDHVLAIGDAENDLEMLQLAGIGVAMGQAEQRVKDAADFVVASNAEDGAAEALERF 271
BLAST of mRNA_F-serratus_M_contig1452.3219.1 vs. uniprot
Match: A0A0G4H592_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H592_9ALVE) HSP 1 Score: 151 bits (381), Expect = 6.430e-37 Identity = 101/289 (34.95%), Postives = 153/289 (52.94%), Query Frame = 2
Query: 488 IRMVVTDLDGTLLGPDKKVSARTLEVVRRARAKGIIFVPASGRSKAGMFSAMEELGEELKRDGA-PFICMNGLTVYGQGNGSHGKIIYSEVMCAKLAAKVVGFWRSHPLAKAAGVSLCGSEGDTVVVERLDDR-TRGYAGCLEPLPVEVGDMMDAIDAGMKLNRLIFF------GATRPAVDAFKDDLTEHLKDHPAELTRGVPEMIEVLPPGASKAVGLKALLKEMNIRPEEVVALGDEENDVEMLRAVGHGVAMGQASLDIRKAARYTAPSHALHGVAVAIETFCSV 1330
IR + D+DGTL+ + VSA+ + V AR G ASGR++ G +A+ GE LK G P + NGL VYGQ + ++++ + A V F R A G+ G + ++ + L R + E LP+ VGD+++A G +N+++ F A RPA+++ L + + VP+MIEVLP GASKA G+ ALLK +NI PE+++A+GD END+EM++ G GVA+ A ++ A++ S+ GVA AI F V
Sbjct: 50 IRAIALDMDGTLMSSHQTVSAKNVAAVEWARRNGKFIFIASGRTRTGAMNALGAYGELLKAQGGFPGVYCNGLLVYGQRS----QVLFERALDTSAVAAVAEFCR------ARGLPFVGYSREEILCDELTAHLARMHNEYKEALPLAVGDVVEAAKEGRVINKMLIFDDPETIAAVRPALESLAPSLG-------GRVVQAVPDMIEVLPEGASKAEGIAALLKNVNIDPEDLMAVGDGENDIEMIQLAGVGVAVANAQPKLKAFAKFEVASNDEDGVAEAICRFAQV 321
BLAST of mRNA_F-serratus_M_contig1452.3219.1 vs. uniprot
Match: A0A1X6NK81_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NK81_PORUM) HSP 1 Score: 148 bits (374), Expect = 8.710e-36 Identity = 106/290 (36.55%), Postives = 151/290 (52.07%), Query Frame = 2
Query: 488 IRMVVTDLDGTLLGPDKKVSARTLEVVRRARAKGIIFVPASGRSKAGMFSAMEELGEELKR---DGAPFICMNGLTVYGQGNGSHGKIIYSEVMCAKLAAKVVGFWRSHPLAKAAGVSLCGSEGDTVVVERLDDRTRGYAGCLEPLPVEVGDMMDAIDAGMKLNRLIFFG------ATRPAVDAFKDDLTEHLKDHPAELTRGVPEMIEVLPPGASKAVGLKALLKEM--NIRPEEVVALGDEENDVEMLRAVGHGVAMGQASLDIRK-AARYTAPSHALHGVAVAIETF 1321
IR++ D DGTLL SA + VR A A GI+FVPA+G+S+ G +A+ +LG++L+ +G P + + GL V+ G G ++Y + KLA +V A+A SL GD ++ E D+ T EP+P VG +D + LN+ I+ G A RPAV E A +T+ +P+M+EVLPPGASK G++ LLK + P V+ALGD END+ M R VG VA+ A ++ A T ++ GVA AI TF
Sbjct: 75 IRLITCDCDGTLLNAACSTSATNIAAVRAAMAAGILFVPATGKSRYGALAALGDLGDDLRAAYPNGVPGVYLQGLNVF----GDDGSMVYEHTVTPKLARAIVAE------ARAVNSSLIAYSGDRILCETADEFTDLLPTYAEPVPEVVGTWESVLDT-VPLNKFIYLGSADHITALRPAV--------EEAVGAEATITQALPDMLEVLPPGASKGDGVRRLLKGAFGGVDPAAVMALGDAENDISMFRLVGTSVAVANALPALKIIATAVTERTNVEDGVAEAIHTF 345
BLAST of mRNA_F-serratus_M_contig1452.3219.1 vs. uniprot
Match: A0A6H5KW38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW38_9PHAE) HSP 1 Score: 145 bits (365), Expect = 9.030e-36 Identity = 88/239 (36.82%), Postives = 137/239 (57.32%), Query Frame = 2
Query: 602 PASGRSKAGMFSAM-EELGEELKRDGAPFICMNGLTVYGQGNGSHGKIIYSEVMCAKLAAKVVGFWRSHPLAKAAGVSLCGSEGDTVVVERLDDRTRGYAGCLEPLPVEVGDMMDAIDAGMKLNRLIFFGATRPAVDAFKDDLTEHLKDHPAELTRGVPEMIEVLPPGASKAVGLKALLKEMNIRPEEVVALGDEENDVEMLRAVGHGVAMGQASLDIRKAARYTAPSHALHGVAVAIE 1315
P + +++ GM+ + E++ LK P + + GL VY +G+ +++Y ++ ++ ++V F GVSL GD +V D T A EP+P VG + DA+ AG+++++LI + + A+D + D+ + D A T+ +P+M+EVLP GASK G+ LLK + I P ++ALGD ENDVEMLR G GV +G AS R AAR+ AP++A G AVA+E
Sbjct: 16 PRARQTRTGMYKILGEDIAAHLKAKDTPGVFIQGLVVY---SGAGDEVLYERLLDIEIVSQVASFCEER------GVSLIAYSGDEIVCSEKDAETDKIALYSEPMPSAVGPLTDAMAAGLRVHKLILMDS-KEAIDRVRPDIERLIGDR-ATFTQALPDMLEVLPAGASKGHGVNVLLKHLGIDPVRLMALGDAENDVEMLRLAGVGVCVGNASPPARAAARFMAPTNANDGSAVAME 243
BLAST of mRNA_F-serratus_M_contig1452.3219.1 vs. uniprot
Match: R7QCM4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCM4_CHOCR) HSP 1 Score: 147 bits (370), Expect = 2.060e-35 Identity = 102/283 (36.04%), Postives = 154/283 (54.42%), Query Frame = 2
Query: 488 IRMVVTDLDGTLLGPDKKVSARTLEVVRRARAK-GIIFVPASGRSKAGMFSAMEELGEELKR---DGAPFICMNGLTVYGQGNGSHGKIIYSEVMCAKLAAKVVGFWRSHPLAKAAGVSLCGSEGDTVVVERLDDRTRGYAGCLEPLPVEVGDMMDAIDAGMKLNRLIFFGATRPAVDAFKDDLTEHLKDHPAELTRGVPEMIEVLPPGASKAVGLKALLKEMNIRPEEVVALGDEENDVEMLRAVGHGVAMGQASLDIRKAARYTA-PSHALHGVAVAIETF 1321
IR++ D+DGT+L +S R + VRR + ++FVPA+G+S+AG +M ++G+ L G P + + GL V+G+ +G ++Y E CA + A+ R+ +AK G+SL D ++ ER D EP P+ +GD DAI LN+ I+ A +D + + E + + LT+ M+EVLPP ASK G++ LL + I PE V+A+GD END+EML VG A+ A ++K A+YT S+ GVA AIE F
Sbjct: 78 IRLMACDMDGTILNASTDISERNKQAVRRLLDETDVMFVPATGKSRAGALKSMADVGDYLNDRNPGGCPGVYLQGLIVFGE----NGDVVY-ENKCADMLAQ-----RTVDIAKELGLSLIAYSRDDILCERTDKFVDLIPSYKEPSPLAIGDWGDAIGK-RPLNKFIYM-AEPSHIDEIRPIVAERIGNL-GHLTQAQSNMLEVLPPNASKGNGVRRLLNSLQIAPEHVMAIGDAENDLEMLEMVGFSCAVANALPSVKKVAKYTDFSSNVDDGVAEAIEQF 347 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1452.3219.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1452.3219.1 >prot_F-serratus_M_contig1452.3219.1 ID=prot_F-serratus_M_contig1452.3219.1|Name=mRNA_F-serratus_M_contig1452.3219.1|organism=Fucus serratus male|type=polypeptide|length=442bp MRQAAHIVRIFALAGLFVAGGESFSTSLTVLARRQPLFGVLGAAATSGREback to top mRNA from alignment at F-serratus_M_contig1452:173921..187258+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1452.3219.1 ID=mRNA_F-serratus_M_contig1452.3219.1|Name=mRNA_F-serratus_M_contig1452.3219.1|organism=Fucus serratus male|type=mRNA|length=13338bp|location=Sequence derived from alignment at F-serratus_M_contig1452:173921..187258+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1452:173921..187258+ >mRNA_F-serratus_M_contig1452.3219.1 ID=mRNA_F-serratus_M_contig1452.3219.1|Name=mRNA_F-serratus_M_contig1452.3219.1|organism=Fucus serratus male|type=CDS|length=2652bp|location=Sequence derived from alignment at F-serratus_M_contig1452:173921..187258+ (Fucus serratus male)back to top |