mRNA_F-serratus_M_contig1450.3199.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1450.3199.1
Unique NamemRNA_F-serratus_M_contig1450.3199.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig1450.3199.1 vs. uniprot
Match: A0A6H5K7B9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7B9_9PHAE)

HSP 1 Score: 286 bits (733), Expect = 1.880e-95
Identity = 150/192 (78.12%), Postives = 170/192 (88.54%), Query Frame = 1 
Query:    1 QLVMNYLIVEGYRDAAERFLKESGTEPKVDLRTIEERVAIRKAMMEGDVVEAMTLANEMDPMMLDRDRELRFGLLKQRLLELVRRGETEEALSFAAERLAPESAGDPDMLRQVEEVVTLLAFEDASKCPLSEMLDVEQRQTAASRLNAAVLQSQQQEKGPWLPDLLRRLVHMQNSLAETVEFPRIEGIDGNK 576
            +LVMNYL+VEGYRDAAE F++ESGT+ KVDL TIEERVAIRKAMM+G+VVEAM LAN++DP MLDRDRELRFGLLKQRLLELVRRG+ +EALSFAAE LAPE A DP +LRQ+EE VTLLAFEDA+  PLS +LD+EQR  AA RLNAAVLQSQQQE GPWLPDLLR+LV+ QN+L+E VEFPRIEGI G K
Sbjct:   47 ELVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKAMMQGNVVEAMKLANDLDPTMLDRDRELRFGLLKQRLLELVRRGDADEALSFAAEHLAPEGAQDPAILRQIEEAVTLLAFEDATSSPLSGLLDMEQRHAAAGRLNAAVLQSQQQETGPWLPDLLRQLVYTQNALSERVEFPRIEGIGGTK 238
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BLAST of mRNA_F-serratus_M_contig1450.3199.1 vs. uniprot
Match: A0A1Y1Y6B0_9FUNG (Uncharacterized protein n=2 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y6B0_9FUNG)

HSP 1 Score: 183 bits (465), Expect = 3.340e-55
Identity = 95/185 (51.35%), Postives = 132/185 (71.35%), Query Frame = 1 
Query:    1 QLVMNYLIVEGYRDAAERFLKESGTEPKVDLRTIEERVAIRKAMMEGDVVEAMTLANEMDPMMLDRDRELRFGLLKQRLLELVRRGETEEALSFAAERLAPESAGDPDMLRQVEEVVTLLAFEDASKCPLSEMLDVEQRQTAASRLNAAVLQSQQQEKGPWLPDLLRRLVHMQNSLAETVEFPRI 555
            +LVMNYL++EGY+DAAE+F +E G  P +DL +IE+R+ IR A+  GD+ EA+   N++DP +LD + +L F L +QRL+EL+R+G  +EAL FA E LAP    +P+ML+++E+ + LLAFED +K P+ E+LD   RQ  AS LNAA+L SQ Q+K P LP LL+ LV  QN L E   +PRI
Sbjct:   31 KLVMNYLVIEGYKDAAEKFSQECGLSPNIDLTSIEDRMNIRNAVHSGDIGEAVERVNDLDPEILDTNPKLFFHLQQQRLIELIRKGNVDEALEFAQEELAPRGEENPEMLQELEQTMALLAFEDLNKSPVGELLDHTHRQKTASELNAAILTSQSQDKDPKLPGLLKMLVWAQNQLDEKTNYPRI 215
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BLAST of mRNA_F-serratus_M_contig1450.3199.1 vs. uniprot
Match: A0A3Q7FDD0_SOLLC (Uncharacterized protein n=18 Tax=Pentapetalae TaxID=1437201 RepID=A0A3Q7FDD0_SOLLC)

HSP 1 Score: 182 bits (462), Expect = 1.540e-54
Identity = 96/192 (50.00%), Postives = 132/192 (68.75%), Query Frame = 1 
Query:    1 QLVMNYLIVEGYRDAAERFLKESGTEPKVDLRTIEERVAIRKAMMEGDVVEAMTLANEMDPMMLDRDRELRFGLLKQRLLELVRRGETEEALSFAAERLAPESAGDPDMLRQVEEVVTLLAFEDASKCPLSEMLDVEQRQTAASRLNAAVLQSQQQEKGPWLPDLLRRLVHMQNSLAETVEFPRIEGIDGNK 576
            +LVMN+L+ EGY +AAE+F KESGT+P +DL TI +R+A++KA+  G+V +A+   N+++P +LD + +L F L +QRL+EL+R G+ EEAL FA E LAP    +   L ++E+ V LLAFED S CP+ E+LDV QR   AS +NAA+L SQ  EK P LP LL+ L+  QN L E   FPRI  +   K
Sbjct:   45 KLVMNFLVTEGYVEAAEKFRKESGTDPDIDLATITDRMAVKKAVQAGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRNGKIEEALEFAQEELAPRGEENQSFLEELEKTVALLAFEDVSNCPVGELLDVSQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLGEKAVFPRITDLSTAK 236
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BLAST of mRNA_F-serratus_M_contig1450.3199.1 vs. uniprot
Match: D8QSL2_SELML (Uncharacterized protein n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QSL2_SELML)

HSP 1 Score: 181 bits (458), Expect = 4.310e-54
Identity = 97/188 (51.60%), Postives = 130/188 (69.15%), Query Frame = 1 
Query:    1 QLVMNYLIVEGYRDAAERFLKESGTEPKVDLRTIEERVAIRKAMMEGDVVEAMTLANEMDPMMLDRDRELRFGLLKQRLLELVRRGETEEALSFAAERLAPESAGDPDMLRQVEEVVTLLAFEDASKCPLSEMLDVEQRQTAASRLNAAVLQSQQQEKGPWLPDLLRRLVHMQNSLAETVEFPRIEGI 564
            +LVMN+L+ EGY DAAE+F  ESGT P+VDL +I +R+A+RKA+  G+V +A+   N+++P +LD + +L F L +QRL+EL+R G+ EEAL FA E LAP    +   L ++E  V LLAFED S CP+ ++LD  QRQ  AS LNAA+L SQ  EK P LP LL+ L+  QN L E V +PRI  I
Sbjct:   33 KLVMNFLVTEGYVDAAEKFQHESGTSPEVDLGSITDRMAVRKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRSGKLEEALEFAQEELAPRGEENHSFLEELERTVALLAFEDTSNCPVGDLLDFSQRQKTASELNAAILTSQSHEKDPKLPSLLKMLIWSQNQLDEKVSYPRINDI 220
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BLAST of mRNA_F-serratus_M_contig1450.3199.1 vs. uniprot
Match: A0A1Y1HP05_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HP05_KLENI)

HSP 1 Score: 180 bits (457), Expect = 5.930e-54
Identity = 95/188 (50.53%), Postives = 130/188 (69.15%), Query Frame = 1 
Query:    1 QLVMNYLIVEGYRDAAERFLKESGTEPKVDLRTIEERVAIRKAMMEGDVVEAMTLANEMDPMMLDRDRELRFGLLKQRLLELVRRGETEEALSFAAERLAPESAGDPDMLRQVEEVVTLLAFEDASKCPLSEMLDVEQRQTAASRLNAAVLQSQQQEKGPWLPDLLRRLVHMQNSLAETVEFPRIEGI 564
            +LVMNYL+ EGY DAAE+F  ESG +P++DL TI +R+ +RKA+  G+V +A+   N+++P +LD + +L F L +QRL+EL+R G+ EEAL FA E LAP    +   L ++E  V LLAFED +  P+S++LD+ QRQ  AS LNAA+L SQ  EK P LP LL+ LV  QN L E V +PRI  +
Sbjct:   33 KLVMNYLVTEGYVDAAEKFQLESGVKPEIDLSTITDRMTVRKAVQSGNVEDALEKVNDLNPEILDTNPQLFFHLQQQRLIELIRSGKVEEALEFAQEELAPRGEENHQFLEELERTVALLAFEDTANSPVSDLLDISQRQKTASELNAAILTSQSHEKDPRLPSLLKMLVWAQNQLDEKVSYPRINDL 220
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BLAST of mRNA_F-serratus_M_contig1450.3199.1 vs. uniprot
Match: M1C1M8_SOLTU (Uncharacterized protein n=4 Tax=Solanum TaxID=4107 RepID=M1C1M8_SOLTU)

HSP 1 Score: 181 bits (458), Expect = 6.560e-54
Identity = 94/188 (50.00%), Postives = 132/188 (70.21%), Query Frame = 1 
Query:    1 QLVMNYLIVEGYRDAAERFLKESGTEPKVDLRTIEERVAIRKAMMEGDVVEAMTLANEMDPMMLDRDRELRFGLLKQRLLELVRRGETEEALSFAAERLAPESAGDPDMLRQVEEVVTLLAFEDASKCPLSEMLDVEQRQTAASRLNAAVLQSQQQEKGPWLPDLLRRLVHMQNSLAETVEFPRIEGI 564
            +LVMN+L+ EGY +AAE+F  ESGTEP++DL TI++R+A+ KA+  G+V +A+ + N+++P +LD + +L F L +QRL+EL+R G+ EEAL FA E LAP    +   L  +E+ V LLAFED SKCP   +LDV QR   AS +NAA+L SQ  EK P LP LL+ L+ +Q+ L E V +PRI  +
Sbjct:   47 RLVMNFLVTEGYAEAAEKFKMESGTEPEIDLATIKDRMAVNKAVQSGNVEDAIEMVNDLNPEILDTNPQLFFHLQQQRLIELIRNGKVEEALEFAQEELAPMGEENQSFLEDLEKTVALLAFEDVSKCPAGALLDVSQRLKTASEVNAAILTSQNHEKDPKLPSLLKMLIWVQDQLDEKVYYPRITNL 234
[Close]
BLAST of mRNA_F-serratus_M_contig1450.3199.1 vs. uniprot
Match: A0A0D6QUP9_ARACU (Uncharacterized protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6QUP9_ARACU)

HSP 1 Score: 181 bits (458), Expect = 7.840e-54
Identity = 95/188 (50.53%), Postives = 130/188 (69.15%), Query Frame = 1 
Query:    1 QLVMNYLIVEGYRDAAERFLKESGTEPKVDLRTIEERVAIRKAMMEGDVVEAMTLANEMDPMMLDRDRELRFGLLKQRLLELVRRGETEEALSFAAERLAPESAGDPDMLRQVEEVVTLLAFEDASKCPLSEMLDVEQRQTAASRLNAAVLQSQQQEKGPWLPDLLRRLVHMQNSLAETVEFPRIEGI 564
            +LVMN+L+ EGY +AAERF  ESGTEP++DL TI +R+A+R+A+  G+V +A+   N+++P +LD + +L F L +QRL+EL+R G+ EEAL FA E LAP    +   L ++E  V LLAFED S CPL+E+LD+ QR   AS +NAA+L SQ  EK P LP LL+ L+  QN L E   +P I  I
Sbjct:   53 KLVMNFLVTEGYVEAAERFRMESGTEPEIDLATITDRMAVRRAVQSGNVQDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRSGKLEEALEFAQEELAPRGEENQAFLEELERTVALLAFEDTSNCPLAELLDISQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKARYPHISDI 240
[Close]
BLAST of mRNA_F-serratus_M_contig1450.3199.1 vs. uniprot
Match: A0A0B0NQE1_GOSAR (glucose-induced degradation protein 8 homolog isoform X1 n=36 Tax=Pentapetalae TaxID=1437201 RepID=A0A0B0NQE1_GOSAR)

HSP 1 Score: 179 bits (455), Expect = 1.810e-53
Identity = 93/188 (49.47%), Postives = 130/188 (69.15%), Query Frame = 1 
Query:    1 QLVMNYLIVEGYRDAAERFLKESGTEPKVDLRTIEERVAIRKAMMEGDVVEAMTLANEMDPMMLDRDRELRFGLLKQRLLELVRRGETEEALSFAAERLAPESAGDPDMLRQVEEVVTLLAFEDASKCPLSEMLDVEQRQTAASRLNAAVLQSQQQEKGPWLPDLLRRLVHMQNSLAETVEFPRIEGI 564
            +LVMN+L+ EGY +AAE+F  ESGTEP +DL TI +R+A++KA+  G+V +A+   N+++P +LD + +L F L +QRL+EL+R G+ EEAL FA E LAP    +   L ++E  V+LLAFED S CP+ E+LD+ QR   AS +NAA+L SQ  EK P LP LL+ L+  QN L E   +PRI  +
Sbjct:   46 KLVMNFLVTEGYVEAAEKFQMESGTEPDIDLATITDRMAVKKAVQSGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRNGKIEEALEFAQEELAPRGEENQSFLEELERTVSLLAFEDVSNCPVGELLDISQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDL 233
[Close]
BLAST of mRNA_F-serratus_M_contig1450.3199.1 vs. uniprot
Match: A0A804L5V2_MUSAM ((wild Malaysian banana) hypothetical protein n=7 Tax=Zingiberales TaxID=4618 RepID=A0A804L5V2_MUSAM)

HSP 1 Score: 179 bits (453), Expect = 2.120e-53
Identity = 95/188 (50.53%), Postives = 127/188 (67.55%), Query Frame = 1 
Query:    1 QLVMNYLIVEGYRDAAERFLKESGTEPKVDLRTIEERVAIRKAMMEGDVVEAMTLANEMDPMMLDRDRELRFGLLKQRLLELVRRGETEEALSFAAERLAPESAGDPDMLRQVEEVVTLLAFEDASKCPLSEMLDVEQRQTAASRLNAAVLQSQQQEKGPWLPDLLRRLVHMQNSLAETVEFPRIEGI 564
            +LVMN+L+ EGY DAAE+F  ESGTEP +DL TI +R+A++KA+  G+V +A+   N+++P +LD + +L F L +QRL+EL+R G  EEAL FA E LAP    + + L ++E  V LLAF+D   CP  E+LDV QR   AS LNAA+L SQ  EK P LP LL+ L+  QN L E   +PRI  I
Sbjct:   27 KLVMNFLVTEGYVDAAEKFRIESGTEPDIDLATITDRMAVKKALQSGNVEDAIEKVNDLNPTILDTNPQLYFHLQQQRLIELIRTGNVEEALEFAQEELAPRGEENQNFLEELERTVALLAFDDVKNCPYGELLDVSQRLKTASELNAAILTSQSHEKDPKLPTLLKMLILAQNQLDEKAVYPRINDI 214
[Close]
BLAST of mRNA_F-serratus_M_contig1450.3199.1 vs. uniprot
Match: A0A8J5YJX2_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YJX2_9ROSI)

HSP 1 Score: 179 bits (455), Expect = 2.810e-53
Identity = 93/188 (49.47%), Postives = 130/188 (69.15%), Query Frame = 1 
Query:    1 QLVMNYLIVEGYRDAAERFLKESGTEPKVDLRTIEERVAIRKAMMEGDVVEAMTLANEMDPMMLDRDRELRFGLLKQRLLELVRRGETEEALSFAAERLAPESAGDPDMLRQVEEVVTLLAFEDASKCPLSEMLDVEQRQTAASRLNAAVLQSQQQEKGPWLPDLLRRLVHMQNSLAETVEFPRIEGI 564
            +LVMN+L+ EGY +AAE+F  ESGTEP +DL TI +R+A++KA+  G+V +A+   N+++P +LD + +L F L +QRL+EL+R G+ EEAL FA E LAP    +   L ++E  V+LLAFED S CP+ E+LD+ QR   AS +NAA+L SQ  EK P LP LL+ L+  QN L E   +PRI  +
Sbjct:   61 KLVMNFLVTEGYVEAAEKFQTESGTEPDIDLATITDRMAVKKAVQSGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRNGKIEEALEFAQEELAPRGEENQSFLEELERTVSLLAFEDVSNCPVGELLDISQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDL 248
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1450.3199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K7B9_9PHAE1.880e-9578.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1Y1Y6B0_9FUNG3.340e-5551.35Uncharacterized protein n=2 Tax=Basidiobolus meris... [more]
A0A3Q7FDD0_SOLLC1.540e-5450.00Uncharacterized protein n=18 Tax=Pentapetalae TaxI... [more]
D8QSL2_SELML4.310e-5451.60Uncharacterized protein n=1 Tax=Selaginella moelle... [more]
A0A1Y1HP05_KLENI5.930e-5450.53Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
M1C1M8_SOLTU6.560e-5450.00Uncharacterized protein n=4 Tax=Solanum TaxID=4107... [more]
A0A0D6QUP9_ARACU7.840e-5450.53Uncharacterized protein n=1 Tax=Araucaria cunningh... [more]
A0A0B0NQE1_GOSAR1.810e-5349.47glucose-induced degradation protein 8 homolog isof... [more]
A0A804L5V2_MUSAM2.120e-5350.53(wild Malaysian banana) hypothetical protein n=7 T... [more]
A0A8J5YJX2_9ROSI2.810e-5349.47Uncharacterized protein n=1 Tax=Gossypium anomalum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1450contigF-serratus_M_contig1450:49730..51675 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score287.3
Seed ortholog evalue5e-75
Seed eggNOG ortholog2880.D7G2A7
Preferred nameGID8
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006109,GO:0006111,GO:0006508,GO:0006511,GO:0006807,GO:0007089,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010498,GO:0010564,GO:0010675,GO:0010677,GO:0010906,GO:0019222,GO:0019538,GO:0019941,GO:0030054,GO:0030163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032991,GO:0034657,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043255,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045721,GO:0045787,GO:0045912,GO:0045931,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051603,GO:0051726,GO:0062012,GO:0062014,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0090068,GO:1900087,GO:1901564,GO:1901565,GO:1901575,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902806,GO:1902808,GO:2000045
EggNOG free text desc.negative regulation of gluconeogenesis
EggNOG OGsKOG2659@1,KOG2659@2759
Ec32 ortholog descriptionLisH dimerisation motif, subgroup
Ec32 orthologEc-16_001850.1
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size576
Cds size567
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1450.3199.1prot_F-serratus_M_contig1450.3199.1Fucus serratus malepolypeptideF-serratus_M_contig1450 49739..51675 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929435.8763065-UTR-F-serratus_M_contig1450:49729..497381622929435.8763065-UTR-F-serratus_M_contig1450:49729..49738Fucus serratus maleUTRF-serratus_M_contig1450 49730..49738 +
1690962851.0936847-UTR-F-serratus_M_contig1450:49729..497381690962851.0936847-UTR-F-serratus_M_contig1450:49729..49738Fucus serratus maleUTRF-serratus_M_contig1450 49730..49738 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929435.8923295-CDS-F-serratus_M_contig1450:49738..498551622929435.8923295-CDS-F-serratus_M_contig1450:49738..49855Fucus serratus maleCDSF-serratus_M_contig1450 49739..49855 +
1690962851.1045375-CDS-F-serratus_M_contig1450:49738..498551690962851.1045375-CDS-F-serratus_M_contig1450:49738..49855Fucus serratus maleCDSF-serratus_M_contig1450 49739..49855 +
1622929435.9058306-CDS-F-serratus_M_contig1450:50450..505271622929435.9058306-CDS-F-serratus_M_contig1450:50450..50527Fucus serratus maleCDSF-serratus_M_contig1450 50451..50527 +
1690962851.1130657-CDS-F-serratus_M_contig1450:50450..505271690962851.1130657-CDS-F-serratus_M_contig1450:50450..50527Fucus serratus maleCDSF-serratus_M_contig1450 50451..50527 +
1622929435.9166934-CDS-F-serratus_M_contig1450:50689..508551622929435.9166934-CDS-F-serratus_M_contig1450:50689..50855Fucus serratus maleCDSF-serratus_M_contig1450 50690..50855 +
1690962851.1241338-CDS-F-serratus_M_contig1450:50689..508551690962851.1241338-CDS-F-serratus_M_contig1450:50689..50855Fucus serratus maleCDSF-serratus_M_contig1450 50690..50855 +
1622929435.9326684-CDS-F-serratus_M_contig1450:51178..513281622929435.9326684-CDS-F-serratus_M_contig1450:51178..51328Fucus serratus maleCDSF-serratus_M_contig1450 51179..51328 +
1690962851.131774-CDS-F-serratus_M_contig1450:51178..513281690962851.131774-CDS-F-serratus_M_contig1450:51178..51328Fucus serratus maleCDSF-serratus_M_contig1450 51179..51328 +
1622929435.948147-CDS-F-serratus_M_contig1450:51618..516751622929435.948147-CDS-F-serratus_M_contig1450:51618..51675Fucus serratus maleCDSF-serratus_M_contig1450 51619..51675 +
1690962851.1393676-CDS-F-serratus_M_contig1450:51618..516751690962851.1393676-CDS-F-serratus_M_contig1450:51618..51675Fucus serratus maleCDSF-serratus_M_contig1450 51619..51675 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1450.3199.1

>prot_F-serratus_M_contig1450.3199.1 ID=prot_F-serratus_M_contig1450.3199.1|Name=mRNA_F-serratus_M_contig1450.3199.1|organism=Fucus serratus male|type=polypeptide|length=189bp
MNYLIVEGYRDAAERFLKESGTEPKVDLRTIEERVAIRKAMMEGDVVEAM
TLANEMDPMMLDRDRELRFGLLKQRLLELVRRGETEEALSFAAERLAPES
AGDPDMLRQVEEVVTLLAFEDASKCPLSEMLDVEQRQTAASRLNAAVLQS
QQQEKGPWLPDLLRRLVHMQNSLAETVEFPRIEGIDGNK
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mRNA from alignment at F-serratus_M_contig1450:49730..51675+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1450.3199.1 ID=mRNA_F-serratus_M_contig1450.3199.1|Name=mRNA_F-serratus_M_contig1450.3199.1|organism=Fucus serratus male|type=mRNA|length=1946bp|location=Sequence derived from alignment at F-serratus_M_contig1450:49730..51675+ (Fucus serratus male)
CAGCTCGTGATGAACTATCTTATCGTGGAGGGCTATCGGGACGCCGCAGA
GCGATTCTTGAAGGAGTCGGGCACCGAGCCTAAGGTGGACCTTCGGACGA
TAGAAGAAAGGGTAGCGATCAGGAAGGTAAGTCGCTGGTTTTCTAGGACC
ACGTAGACAGGTTCTAACGTTCGAAGTGCTTTCGTGCAATGTGTTGGCGG
GGCACGCCTATGATACAACTCTTTCTAGCCATGGGTTCTTGAACAGTTCG
CGACGATTCGCTTCGCAGCGTGGCGCCGACGACGCAGACGTTGAGATGTG
GCGTACATCAGTGTATGCGTGCGTACATCAGTGTATGTGTGCATACATAA
AGTAGAAATGTTCTTGCATCGGGGGCGATCGGAAGAGGTTCCCTGTAACC
ACACAAGCGATTTACCGCATACAAGCAGTCGATGCGACAGCGAAATGCAT
GCGGAACAGGACATCCGTTCAGCGAAGGAGTTGTTCCTTGGTCGAGGTCG
TGGAAAGACTCGCGTTTCTCCTTCGTGGCTCTCTCGAGGATCTTTCCTGG
GATCTTTCCTGGCTCTGCGTCAGTGTCAACACTTTGCTCATTTTTCTCAA
TTCCATAGTTATGCGTGGTGGCACCCCGTACCGTTGCTGCAACATGACAC
TCTTCTCACTATAAACTCCCTCGCCTGGCGGTCTTGTAAACGTGAAACTT
TCTCCCGGTCCTCACGGGAAGGCAATGATGGAAGGCGACGTGGTGGAAGC
TATGACCTTGGCCAACGAAATGGATCCCATGATGCTCGACAGAGACAGGT
GCGGGCGGTGTTAAGAGTACGGTGCGCTGTCGGGCGATGGTCGAGCGAGC
TCTGCCTTGCGTTGGAGATTCTGAGCGGTGGCGCCCCGTCCCTCCACAGT
TCCCATGGATGTCCACGTAGTCCGCCTACGCGTGCTCGGCTGCGAGGAAT
GCTGTTCCAGGGAACTTCGCTTTGGGTTGTTGAAGCAGCGGCTGCTGGAA
CTGGTACGTCGAGGGGAAACGGAGGAGGCTCTGAGCTTTGCGGCTGAGCG
CCTCGCACCGGAGAGCGCGGGGGATCCTGATATGCTGCGTCAAGTGGAAG
AGGTTGTTACCTTGCTGGCGTTCGAGGTGCGACGCCCGTACTAAAACGCG
CCCAGCTTGCGGTAGGTGTGTTGGACAGTCTCTAGATATGGGTGCCTCCT
CTCCCACCCCTTTCTCCGATTTTGGCCCATGGGCTTTTCTGCTTCGAATT
GAAGTGGAGGGTGTCGGTCCTTGACTGAAGCTCGGGTGGCAGCATAATCT
TAAGCTCTTACGTACGTGTTGCGCGAAAGTCACGACAAACGATGTGCAAC
CTCTGCTTGGTGAGTGGTCATCGCAAGACAGGCGGACGCTGACAACTGAG
AGTGGTTCCAATATTGCCTAACCTCGCACGATCTGTTCCGAAAACCCAGG
ACGCCAGTAAATGCCCTCTGTCCGAGATGCTGGATGTAGAACAGCGTCAG
ACCGCAGCGAGCCGGCTGAATGCAGCAGTGCTACAGAGCCAACAGCAGGA
AAAGGGGCCCTGGTTGCCCGACCTCCTGCGACGGCTGGTGCATATGCAGG
TCAGGGGTAGCTTTTATTGCCGCGCCCGATTGATGTTGTGGCCTTCGTCC
GGATGTTACGCTTCGAGAACTGCACCCTGCAGTGTTGAGAACACCCTTTC
CTTTCACGTCCCACTATTAGAGAGTAACATTAATTGCATTGCGACGTGAT
TTCTTTGGACCCTTGGTATATACCGGTATACAAAAAAAGGATCGTGTACT
GTATGTATCCATTTGAAGGTGTCATATCAGTTTTCCTCCCCTCGTGCTTA
CTTTTGTGTATCGAACCCATCTTAATCGCTCTCTCGCAGAACTCTCTTGC
CGAGACGGTGGAGTTCCCACGGATAGAAGGCATTGATGGGAACAAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig1450:49730..51675+

>mRNA_F-serratus_M_contig1450.3199.1 ID=mRNA_F-serratus_M_contig1450.3199.1|Name=mRNA_F-serratus_M_contig1450.3199.1|organism=Fucus serratus male|type=CDS|length=1134bp|location=Sequence derived from alignment at F-serratus_M_contig1450:49730..51675+ (Fucus serratus male)
ATGAACTATCTTATCGTGGAGGGCTATCGGGACGCCGCAGAGCGATTCTT
GAAGGAGTCGGGCACCGAGCCTAAGGTGGACCTTCGGACGATAGAAGAAA
GGGTAGCGATCAGGAAGATGAACTATCTTATCGTGGAGGGCTATCGGGAC
GCCGCAGAGCGATTCTTGAAGGAGTCGGGCACCGAGCCTAAGGTGGACCT
TCGGACGATAGAAGAAAGGGTAGCGATCAGGAAGGCAATGATGGAAGGCG
ACGTGGTGGAAGCTATGACCTTGGCCAACGAAATGGATCCCATGATGCTC
GACAGAGACAGGCAATGATGGAAGGCGACGTGGTGGAAGCTATGACCTTG
GCCAACGAAATGGATCCCATGATGCTCGACAGAGACAGGGAACTTCGCTT
TGGGTTGTTGAAGCAGCGGCTGCTGGAACTGGTACGTCGAGGGGAAACGG
AGGAGGCTCTGAGCTTTGCGGCTGAGCGCCTCGCACCGGAGAGCGCGGGG
GATCCTGATATGCTGCGTCAAGTGGAAGAGGTTGTTACCTTGCTGGCGTT
CGAGGGAACTTCGCTTTGGGTTGTTGAAGCAGCGGCTGCTGGAACTGGTA
CGTCGAGGGGAAACGGAGGAGGCTCTGAGCTTTGCGGCTGAGCGCCTCGC
ACCGGAGAGCGCGGGGGATCCTGATATGCTGCGTCAAGTGGAAGAGGTTG
TTACCTTGCTGGCGTTCGAGGACGCCAGTAAATGCCCTCTGTCCGAGATG
CTGGATGTAGAACAGCGTCAGACCGCAGCGAGCCGGCTGAATGCAGCAGT
GCTACAGAGCCAACAGCAGGAAAAGGGGCCCTGGTTGCCCGACCTCCTGC
GACGGCTGGTGCATATGCAGGACGCCAGTAAATGCCCTCTGTCCGAGATG
CTGGATGTAGAACAGCGTCAGACCGCAGCGAGCCGGCTGAATGCAGCAGT
GCTACAGAGCCAACAGCAGGAAAAGGGGCCCTGGTTGCCCGACCTCCTGC
GACGGCTGGTGCATATGCAGAACTCTCTTGCCGAGACGGTGGAGTTCCCA
CGGATAGAAGGCATTGATGGGAACAAGAACTCTCTTGCCGAGACGGTGGA
GTTCCCACGGATAGAAGGCATTGATGGGAACAAG
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