mRNA_F-serratus_M_contig1447.3169.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1447.3169.1 vs. uniprot
Match: D7FV95_ECTSI (DUF1995 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV95_ECTSI) HSP 1 Score: 311 bits (797), Expect = 5.530e-97 Identity = 164/319 (51.41%), Postives = 230/319 (72.10%), Query Frame = 2
Query: 497 QELPELAGEREDGEGAQGLEVRRESPFPSSSERGALEAAAASQKALVAGTRGLIIDVEVKQLDDEHPEFEPDLMIHFVMEVGKNLATVTGKTKIMLRGNHLATRATETLRRENMQAVETGFDPREDVSFCTMRTRSLDDEGDPDSMDDFAAWVARQISEDQRLVMIAGPRSNADVIVMREVVKAARGRPVVLINPRMAFMPRETSDFDTVYLLRQFSVQPVKKDPRKEARRSPFKITSRQRRQQTIVSELGQVVPKVLMTRAFPDDFKLYVDIDGKGFRLEDTYNEKPHPSVVCLTAQTIIEEAQRKMSMKVRMAAANE 1453
Q LPEL GE G E +RE+PFP+SS+RGALEA++ASQ+AL+AG RGLIIDVEV+Q+DD H EF+ ++ I F ++ K LATV+G+ K++LRG HLA +ATE L++ N + E G +PR D+SFC+ + + DDE D SM DFA+ + +E++R+ ++ PR DV V+RE++ A+GRPVVLI PRM +MP ET F+TVY L+Q++VQPV +P+K + ++T + QQTI SELGQV+P+VL+TRAFP DFKLY+DIDGKGF+LE TY+ KP P+VV TAQ I E Q++++++ + A +
Sbjct: 54 QALPELEGE--------GPETKRENPFPTSSDRGALEASSASQQALLAGKRGLIIDVEVRQMDDTHAEFDEEMQIDFATDISKALATVSGRVKVLLRGIHLAEKATEMLQKANTKGEEEGIEPRRDISFCSFQMANTDDEDDEKSMRDFASTLGLA-NEEERVFLMVCPRRLVDVTVLREIILVAKGRPVVLITPRMPYMPVETDGFETVYQLKQYNVQPVPTNPKKRIKN--VRLTRLGQNQQTIYSELGQVIPRVLVTRAFPGDFKLYLDIDGKGFQLEKTYDAKPQPAVVSFTAQNKIREVQQRVTLQEKRVVAKD 361 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1447.3169.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1447.3169.1 >prot_F-serratus_M_contig1447.3169.1 ID=prot_F-serratus_M_contig1447.3169.1|Name=mRNA_F-serratus_M_contig1447.3169.1|organism=Fucus serratus male|type=polypeptide|length=466bp MNGIVPCLLVVSAVVCRRAFGWNPSIRIAEVSRHVYSPKKMTALSLTPRDback to top mRNA from alignment at F-serratus_M_contig1447:202908..210646- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1447.3169.1 ID=mRNA_F-serratus_M_contig1447.3169.1|Name=mRNA_F-serratus_M_contig1447.3169.1|organism=Fucus serratus male|type=mRNA|length=7739bp|location=Sequence derived from alignment at F-serratus_M_contig1447:202908..210646- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1447:202908..210646- >mRNA_F-serratus_M_contig1447.3169.1 ID=mRNA_F-serratus_M_contig1447.3169.1|Name=mRNA_F-serratus_M_contig1447.3169.1|organism=Fucus serratus male|type=CDS|length=2796bp|location=Sequence derived from alignment at F-serratus_M_contig1447:202908..210646- (Fucus serratus male)back to top |