mRNA_F-serratus_M_contig1447.3166.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1447.3166.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE) HSP 1 Score: 204 bits (519), Expect = 1.070e-61 Identity = 106/203 (52.22%), Postives = 144/203 (70.94%), Query Frame = 1
Query: 52 DFTGKIGIYPFTEQVRAQRSSRNRPAGAMEINTVEVTKERYKKMMLEHVIPAIKPRFPRPPASASPDDRIIWVQQVNTRPHLINNDPELIAAMYSDGWNIRLVNQPANSPDTNILDLGFFASVQSLQDRTNPKNIDELVEAVKAAWEKDPPETLNRVWLSLQACLEQILLAGGDNDYRLPHVRKGRLENAG-TLPWQLGCSEE 657
+FTGK+GI+ FT Q AQR+SRNR AG ME VEVTKE +K+ +++ V PAIK R+P R I++Q N H IN DP+++AA +DGW+IRL+NQP+NSPDTNILDLGFF +VQSLQDR P+ +DE + VK A+E+ P T ++VW+SLQA L QI+LA G+N ++LPH++K N+G ++P +L S E
Sbjct: 87 NFTGKLGIFQFTVQRAAQRNSRNRAAGTMETKCVEVTKEVFKRKVVDEVFPAIKARWP------GGRGRTIYIQLDNKPSHRINADPDVVAAGIADGWDIRLINQPSNSPDTNILDLGFFNAVQSLQDRNTPRTVDEFITEVKRAFEEQSPSTHDKVWVSLQAIL-QIILAKGNNTFKLPHLKKDNAANSGRSIPKELPLSAE 282
BLAST of mRNA_F-serratus_M_contig1447.3166.1 vs. uniprot
Match: A0A8I6WKB7_HORVV (Uncharacterized protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6WKB7_HORVV) HSP 1 Score: 189 bits (480), Expect = 1.900e-56 Identity = 97/218 (44.50%), Postives = 144/218 (66.06%), Query Frame = 1
Query: 4 VSRSCWAAEANNSQNTDFTGKIGIYPFTEQVRAQRSSRNRPAGAMEINTVEVTKERYKKMMLEHVIPAIKPRFPRPPASASPDDRIIWVQQVNTRPHLINNDPELIAAMYSDGWNIRLVNQPANSPDTNILDLGFFASVQSLQDRTNPKNIDELVEAVKAAWEKDPPETLNRVWLSLQACLEQILLAGGDNDYRLPHVRKGRLENAGTLPWQLGCSEE 657
V+R W +E N F+GKIGI+PF +++ AQR S NRP G ME +++V ++ ++ M+E+++PAI+ +P A + I+++Q N +PH++ NDPE + A+ S G +IRL+ QPANSPD N LDLGFF S+QSL D +P+ + +L++ V +E LNRV+LSLQAC+ +IL G N Y++PHV K RLE+ G LP +L C +E
Sbjct: 49 VARPKWDSEGN----VTFSGKIGIWPFVKEIPAQRKSDNRPRGTMETKSIKVNRQVMREFMIENLLPAIQSSWPDNDAGQT-----IFIKQDNAKPHILPNDPEFLVAVESTGLDIRLIQQPANSPDLNGLDLGFFNSLQSLTDCLSPRTLQDLIKGVLEEFENYEVYKLNRVFLSLQACMIEILNHAGGNGYKIPHVNKERLESLGLLPQRLTCPQE 257
BLAST of mRNA_F-serratus_M_contig1447.3166.1 vs. uniprot
Match: A0A452XZT7_AEGTS (Uncharacterized protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452XZT7_AEGTS) HSP 1 Score: 187 bits (474), Expect = 1.700e-54 Identity = 96/218 (44.04%), Postives = 141/218 (64.68%), Query Frame = 1
Query: 4 VSRSCWAAEANNSQNTDFTGKIGIYPFTEQVRAQRSSRNRPAGAMEINTVEVTKERYKKMMLEHVIPAIKPRFPRPPASASPDDRIIWVQQVNTRPHLINNDPELIAAMYSDGWNIRLVNQPANSPDTNILDLGFFASVQSLQDRTNPKNIDELVEAVKAAWEKDPPETLNRVWLSLQACLEQILLAGGDNDYRLPHVRKGRLENAGTLPWQLGCSEE 657
V+R W +N N F+GKIGI+PF ++V AQR S NRP G +E +++V ++ ++ M+E+++PAI+ +P A + I++QQ N +PH++ NDPE +AA+ G +IRL+ QP NSPD N L+LGFF S+QSL D +P+ + +L++ V +E LNRV+LSLQAC+ +IL G N Y++PH K RLEN G LP +L C E
Sbjct: 135 VARPRW----DNEGNVTFSGKIGIWPFVKEVSAQRRSDNRPRGTLETKSIKVNRQVMREFMIENLLPAIQASWPENDAGQT-----IYIQQDNAKPHILPNDPEFVAAVERTGLDIRLIQQPVNSPDLNGLELGFFNSLQSLTDCLSPRTLQDLIKGVLDEFENYEVYKLNRVFLSLQACMIEILNHAGGNGYKIPHANKERLENLGMLPPRLTCPRE 343
BLAST of mRNA_F-serratus_M_contig1447.3166.1 vs. uniprot
Match: A0A484MU55_9ASTE (Uncharacterized protein n=2 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484MU55_9ASTE) HSP 1 Score: 189 bits (480), Expect = 3.550e-54 Identity = 100/197 (50.76%), Postives = 134/197 (68.02%), Query Frame = 1
Query: 55 FTGKIGIYPFTEQVRAQRSSRNRPAGAMEINTV-EVTKERYKKMMLEHVIPAIKPRFPRPPASASPDDRIIWVQQVNTRPHLINNDPELIAAMYSDGWNIRLVNQPANSPDTNILDLGFFASVQSLQDRTNPKNIDELVEAVKAAWEKDPPETLNRVWLSLQACLEQILLAGGDNDYRLPHVRKGRLENAGTLPWQL 642
+ GKIGI+PF E V A+R S+NR AG +E+ + VTKE K M++ VIPAI+ ++P S DR I +QQ N +PH+ DPE +AA +G+NI L NQP NSPD NILDLGFF ++QSL+++T PKN+ ELVEAVK A+ P+TLN+VWLS Q +++++ G N Y+LPH+ K RL GTLP L
Sbjct: 263 WDGKIGIFPFVETVAAKRKSKNREAGVLEVKQLLSVTKEVTKDMLVNQVIPAIREKWP------SFLDRNIILQQDNAKPHISATDPEFMAAASGNGFNIILTNQPPNSPDLNILDLGFFRAIQSLKEKTAPKNVAELVEAVKGAYATLTPQTLNKVWLSYQHVMQEVMNNDGGNKYKLPHMAKDRLAREGTLPVTL 453
BLAST of mRNA_F-serratus_M_contig1447.3166.1 vs. uniprot
Match: A0A6A4Z322_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z322_9STRA) HSP 1 Score: 189 bits (480), Expect = 3.780e-54 Identity = 94/218 (43.12%), Postives = 143/218 (65.60%), Query Frame = 1
Query: 4 VSRSCWAAEANNSQNTDFTGKIGIYPFTEQVRAQRSSRNRPAGAMEINTVEVTKERYKKMMLEHVIPAIKPRFPRPPASASPDDRIIWVQQVNTRPHLINNDPELIAAMYSDGWNIRLVNQPANSPDTNILDLGFFASVQSLQDRTNPKNIDELVEAVKAAWEKDPPETLNRVWLSLQACLEQILLAGGDNDYRLPHVRKGRLENAGTLPWQLGCSEE 657
V+R W +++++ + GKIG + FTE V A RSSRNRPAG +E+ + VT+ YKKM++++VIPAIK ++P + R + +QQ N RPH+ D +++A SDGW++ L QP NSPD N+LDLGFF ++QSLQ + E+V+A AW+ P +L R +L+LQ CL ++++A GDN Y++PH++K L+ +G LP + CSE+
Sbjct: 227 VARPRW----DDAKSECWDGKIGTWHFTETVPAARSSRNRPAGTLELRPINVTRPIYKKMLIDNVIPAIKAKWP------AESSRSVVIQQDNARPHVAPWDAAVVSACTSDGWSMSLKCQPPNSPDLNVLDLGFFRAIQSLQQTHHSNTYQEIVDATNKAWDDVDPWSLERNFLTLQCCLREVIMAAGDNSYKVPHMKKEALKKSGKLPESVMCSED 434
BLAST of mRNA_F-serratus_M_contig1447.3166.1 vs. uniprot
Match: A0A6A4B6L5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4B6L5_9STRA) HSP 1 Score: 182 bits (463), Expect = 2.010e-53 Identity = 89/199 (44.72%), Postives = 133/199 (66.83%), Query Frame = 1
Query: 52 DFTGKIGIYPFTEQVRAQRSSRNRPAGAMEINTVEVTKERYKKMMLEHVIPAIKPRFPRPPASASPDDRIIWVQQVNTRPHLINNDPELIAAMYSDGWNIRLVNQPANSPDTNILDLGFFASVQSLQDRTNPKNIDELVEAVKAAWEKDPPETLNRVWLSLQACLEQILLAGGDNDYRLPHVRKGRLENAGTLPWQLGC 648
D+ GK+GI+P + R QR SRNRPAG E++ V +T+E Y+ M++ VIPAIK ++P+ I +QQ N +PH++ ND +IAA S+GW + +NQPA SPD N LDL FF+S+QSLQ +T P+ ++L+E V+ A+ + +TLN+ +L+LQ+ + +I+ GG N Y++PH+ K +L NAG LP L C
Sbjct: 85 DWDGKVGIWPVVKNYRTQRWSRNRPAGIDEVHPVTMTREIYRDMLINDVIPAIKEKWPQAQKGIP-----IRLQQDNAKPHVLENDAAVIAAGCSNGWTMYPLNQPAQSPDLNCLDLSFFSSIQSLQSQTRPRTTEDLIEEVEYAFHETSADTLNKTFLTLQSVMLEIMKCGGSNTYKIPHLHKDKLRNAGKLPITLPC 278
BLAST of mRNA_F-serratus_M_contig1447.3166.1 vs. uniprot
Match: UPI0007F012D1 (uncharacterized protein LOC108203813 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F012D1) HSP 1 Score: 184 bits (466), Expect = 2.810e-53 Identity = 96/202 (47.52%), Postives = 134/202 (66.34%), Query Frame = 1
Query: 55 FTGKIGIYPFTEQVRAQRSSRNRPAGAMEINTVE-VTKERYKKMMLEHVIPAIKPRFPRPPASASPDDRIIWVQQVNTRPHLINNDPELIAAMYSDGWNIRLVNQPANSPDTNILDLGFFASVQSLQDRTNPKNIDELVEAVKAAWEKDPPETLNRVWLSLQACLEQILLAGGDNDYRLPHVRKGRLENAGTLPWQLGCSEE 657
F+GKIGI+PFT A+R+S+NR AG M E +TKE+ K ++E VIPAI ++P+ R I +QQ N +PH+ N+ E + A DG++IRL+ QP NSPD N+LDLGFF S+Q LQ P I+ELV AVK ++++ P E LNRV+L+ Q C+++I+ GDNDY++PH+ K RLE GTLP Q+ C +
Sbjct: 154 FSGKIGIFPFTFIEPAKRNSKNRVAGTMVTKVDESITKEKVKSCLIEKVIPAIHAKWPQ-------GMRTIIIQQDNAKPHIDCNNAEFMQAASKDGFDIRLICQPPNSPDLNVLDLGFFRSIQDLQHEKAPTTIEELVAAVKQSFDEYPVEKLNRVFLTQQTCMKEIMKFKGDNDYKIPHMGKDRLEREGTLPLQIRCESD 348
BLAST of mRNA_F-serratus_M_contig1447.3166.1 vs. uniprot
Match: W4HAZ6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HAZ6_9STRA) HSP 1 Score: 181 bits (459), Expect = 3.280e-53 Identity = 91/210 (43.33%), Postives = 135/210 (64.29%), Query Frame = 1
Query: 4 VSRSCWAAEANNSQNTDFTGKIGIYPFTEQVRAQRSSRNRPAGAMEINTVEVTKERYKKMMLEHVIPAIKPRFPRPPASASPDDRIIWVQQVNTRPHLINNDPELIAAMYSDGWNIRLVNQPANSPDTNILDLGFFASVQSLQDRTNPKNIDELVEAVKAAWEKDPPETLNRVWLSLQACLEQILLAGGDNDYRLPHVRKGRLENAGTLP 633
V+R W +N ++ GKIG + FTEQV R+SRNRPAG +E V VT++ Y+ M+++HVIPAIK ++P + R I +QQ N RPH+ D ++ A SDGW + L QP NSPD N+LDLGFF ++QSLQ++ +N+D++V A AW++ P TLN +L+LQ C+ +++ G+N+Y++PH++K L G LP
Sbjct: 7 VARPRW----DNEKSALVDGKIGTWHFTEQVPVIRASRNRPAGTLETKPVSVTRDMYRAMLIDHVIPAIKAKWP------VGESRRIIIQQDNARPHVPPLDSRIVDACTSDGWMMELKYQPPNSPDLNVLDLGFFRAIQSLQEKNYSRNVDDIVAASDEAWKQVEPMTLNANFLTLQCCMHEVIRVAGNNNYKIPHMKKASLALKGMLP 206
BLAST of mRNA_F-serratus_M_contig1447.3166.1 vs. uniprot
Match: A0A6A3GIE4_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3GIE4_9STRA) HSP 1 Score: 179 bits (455), Expect = 3.970e-53 Identity = 88/199 (44.22%), Postives = 132/199 (66.33%), Query Frame = 1
Query: 52 DFTGKIGIYPFTEQVRAQRSSRNRPAGAMEINTVEVTKERYKKMMLEHVIPAIKPRFPRPPASASPDDRIIWVQQVNTRPHLINNDPELIAAMYSDGWNIRLVNQPANSPDTNILDLGFFASVQSLQDRTNPKNIDELVEAVKAAWEKDPPETLNRVWLSLQACLEQILLAGGDNDYRLPHVRKGRLENAGTLPWQLGC 648
D+ GK+GI+P + R QR SRNRPAG E++ V +T+E Y+ M++ VIPAIK ++P+ I +QQ N +PH++ ND +IAA S+GW + +NQPA SPD N LDL FF+S+QSLQ +T P+ ++L+E V+ A+ + +TLN+ +L+LQ+ + +I+ GG N Y++P + K +L NAG LP L C
Sbjct: 12 DWDGKVGIWPVVKNYRTQRWSRNRPAGIDEVHPVTMTREIYRDMLINDVIPAIKEKWPQAQKGIP-----IRLQQDNAKPHVLENDAAVIAAGCSNGWTMYPLNQPAQSPDLNCLDLSFFSSIQSLQSQTRPRTTEDLIEEVEYAFHETSADTLNKTFLTLQSVMLEIMKCGGSNTYKIPQLHKDKLRNAGKLPITLPC 205
BLAST of mRNA_F-serratus_M_contig1447.3166.1 vs. uniprot
Match: A0A6A4YXI9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YXI9_9STRA) HSP 1 Score: 186 bits (473), Expect = 5.080e-53 Identity = 93/208 (44.71%), Postives = 134/208 (64.42%), Query Frame = 1
Query: 34 NNSQNTDFTGKIGIYPFTEQVRAQRSSRNRPAGAMEINTVEVTKERYKKMMLEHVIPAIKPRFPRPPASASPDDRIIWVQQVNTRPHLINNDPELIAAMYSDGWNIRLVNQPANSPDTNILDLGFFASVQSLQDRTNPKNIDELVEAVKAAWEKDPPETLNRVWLSLQACLEQILLAGGDNDYRLPHVRKGRLENAGTLPWQLGCSEE 657
N+ F GKIG + FTE+V A R+SRNRPAG +E V VT+ YK M+++ VIP IK ++P S R + +QQ N RPH+ +D ++ A S GWN+++V QP NSPD NILDLGFF ++QSLQ++ + +NID+++ A AW + TLN +L+LQ C+++I+ A GDN+Y++PH+ K +L G LP L E
Sbjct: 229 NDDTGEWFDGKIGTWHFTEKVAAARTSRNRPAGTLETQPVSVTRPVYKAMLIDKVIPTIKSKWP------SSAGRNVIIQQDNARPHVPPSDSAIVDACKSGGWNMKVVYQPPNSPDLNILDLGFFRAIQSLQEKNHSRNIDDIIAATDQAWSDELSSTLNDNFLTLQGCMQEIISAQGDNNYKIPHMGKAKLAARGRLPEVLSVDSE 430 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1447.3166.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1447.3166.1 >prot_F-serratus_M_contig1447.3166.1 ID=prot_F-serratus_M_contig1447.3166.1|Name=mRNA_F-serratus_M_contig1447.3166.1|organism=Fucus serratus male|type=polypeptide|length=219bp DVSRSCWAAEANNSQNTDFTGKIGIYPFTEQVRAQRSSRNRPAGAMEINTback to top mRNA from alignment at F-serratus_M_contig1447:29274..29930- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1447.3166.1 ID=mRNA_F-serratus_M_contig1447.3166.1|Name=mRNA_F-serratus_M_contig1447.3166.1|organism=Fucus serratus male|type=mRNA|length=657bp|location=Sequence derived from alignment at F-serratus_M_contig1447:29274..29930- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1447:29274..29930- >mRNA_F-serratus_M_contig1447.3166.1 ID=mRNA_F-serratus_M_contig1447.3166.1|Name=mRNA_F-serratus_M_contig1447.3166.1|organism=Fucus serratus male|type=CDS|length=1314bp|location=Sequence derived from alignment at F-serratus_M_contig1447:29274..29930- (Fucus serratus male)back to top |