mRNA_F-serratus_M_contig1446.3164.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1446.3164.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 369 bits (947), Expect = 2.420e-125 Identity = 177/255 (69.41%), Postives = 204/255 (80.00%), Query Frame = 1
Query: 19 QILGRGSCFDDILQLSLMSKAMAAATFHKFCKHFAMEMFEEHIYLPTGTYLDEVMGHYDKLGFTGAMGSTDVTHVGWGMCPFTLGRSFTGKEGFPTIAFQVTVDHAGRALAVTSGFTGATSDKTLICYDAAINKINTDNQYTGREYKLWKPDGTYRERKG-----------WVTLMAPSKYPADNDDVVFSRTLESVRKDVECFFGILKGRFRVLKLRIGYHSQERIDNIFFTCCILHNMLHTFDGMDKFEENVD 750
Q+LG+G+CFDD+ QLS MSK+MA TFHKFC+HFA EMF+EHIYLPTGTYLDEVMG + +LG+TGA GSTDVTH+GW MCPFTLGRSFTGKEGFPTIA+ VTVDH GR LAVT+GFTGAT+DKT+I YD+ +NKI T +QYT REYKL K +GT R R+G WVTL+APSKYP N+D FSR LESVRKDV CF R+LKLR+ YH +E +DNIFFTCCILHNMLHTFDG+D FEEN D
Sbjct: 42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTD 288
BLAST of mRNA_F-serratus_M_contig1446.3164.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE) HSP 1 Score: 347 bits (889), Expect = 1.590e-116 Identity = 166/233 (71.24%), Postives = 195/233 (83.69%), Query Frame = 1
Query: 16 LQILGRGSCFDDILQLSLMSKAMAAATFHKFCKHFAMEMFEEHIYLPTGTYLDEVMGHYDKLGFTGAMGSTDVTHVGWGMCPFTLGRSFTGKEGFPTIAFQVTVDHAGRALAVTSGFTGATSDKTLICYDAAINKINTDNQYTGREYKLWKPDGTYRERKGWVTLMAPSKYPADNDDVVFSRTLESVRKDVECFFGILKGRFRVLKLRIGYHSQERIDNIFFTCCILHNMLHT 714
L++LG+G+CFDD+ QLS MS+++A A FHKFC+H A EMF+EHIYLPTGTYLDEVMG + +LG TGA GSTDVTH+G MCPFTLGRSFTGKEGFPTIA++VTVDHAGRALAVT+GF G T+DKT I YD+ +NKI T++QYT REYKL K +GT R R+G L+ + Y N+D FSR LESVRKDVECFFGILKGRFR+LKLR+ YH +E IDNIFFTCCILHNMLHT
Sbjct: 137 LKVLGKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCF-LIVDNGYYESNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 368
BLAST of mRNA_F-serratus_M_contig1446.3164.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 333 bits (855), Expect = 4.520e-111 Identity = 156/262 (59.54%), Postives = 191/262 (72.90%), Query Frame = 1
Query: 1 QILTALQILGRGSCFDDILQLSLMSKAMAAATFHKFCKHFAMEMFEEHIYLPT--GTYLDEVMGHYDKLGFTGAMGSTDVTHVGWGMCPFTLGRSFTGKEGFPTIAFQVTVDHAGRALAVTSGFTGATSDKTLICYDAAINKINTDNQYTGREYKLWKPDGTYRERKG-----------WVTLMAPSKYPADNDDVVFSRTLESVRKDVECFFGILKGRFRVLKLRIGYHSQERIDNIFFTCCILHNMLHTFDGMDKFEENV 747
++L L ILGRG+CF I Q+S MS FHKFCKHFA EM++EHIYLP+ LD VM YD+LGF+GAMGS DVTH+GW CP+ L RS+TGKEG PT+ +QVTV+HAGRA+AVT GFT +T+DKT +C+DA + KI TDNQYT + + ++ DGT KG W LM P+KYP +D++FS+ LESVRKDVECFFGILKG FR+ K+ + YH QERIDN+FFTCCILHNMLHTFDGMD+ EN
Sbjct: 98 KVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENT 359
BLAST of mRNA_F-serratus_M_contig1446.3164.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 329 bits (844), Expect = 3.670e-108 Identity = 153/258 (59.30%), Postives = 194/258 (75.19%), Query Frame = 1
Query: 1 QILTALQILGRGSCFDDILQLSLMSKAMAAATFHKFCKHFAMEMFEEHIYLPTGTYLDEVMGHYDKLGFTGAMGSTDVTHVGWGMCPFTLGRSFTGKEGFPTIAFQVTVDHAGRALAVTSGFTGATSDKTLICYDAAINKINTDNQYTGREYKLWKPDGTYRERKG-----------WVTLMAPSKYPADNDDVVFSRTLESVRKDVECFFGILKGRFRVLKLRIGYHSQERIDNIFFTCCILHNMLHTFDGMDKFEE 741
++L LQIL RG+CF DI +S +S AAATFH+F ++FA EM+ EHI+LPTG Y +VM YD+LGF+GA GSTDVTH+ WGMCP+ RS+TGKEG+PT+A+QVTVDH R LAVT GFTG+T+DK++I YD A+ KI D Y+ +E+ +++ DGT + KG WVTL+ PSKYP D +D+ FS+ LESVRKDVECFFGI+KGRFR+LKL I YH QE IDN+FFTCCILHNMLH++D + EE
Sbjct: 158 KVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEE 415
BLAST of mRNA_F-serratus_M_contig1446.3164.1 vs. uniprot
Match: A0A6H5K872_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K872_9PHAE) HSP 1 Score: 325 bits (833), Expect = 2.290e-107 Identity = 158/245 (64.49%), Postives = 189/245 (77.14%), Query Frame = 1
Query: 16 LQILGRGSCFDDILQLSLMSKAMAAATFHKFCKHFAMEMFEEHIYLPTGTYLDEVMGHYDKLGFTGAMGSTDVTHVGWGMCPFTLGRSFTGKEGFPTIAFQVTVDHAGRALAVTSGFTGATSDKTLICYDAAINKINTDNQYTGREYKLWKPDGTYRERKGWVTLMAPSKYPADNDDVVFSRTLESVRKDVECFFGILKGRFRVLKLRIGYHSQERIDNIFFTCCILHNMLHTFDGMDKFEENVD 750
L +LG+G+CFDD+ QLS MS +MA ATFHKFC+HFA EMF+EHI+ PT TYLDE MG + +LG TGA STDVTH+ MCPFTLGRSFTGKEGFPTIA++VTVDHA RALAVT+GFTGA +DKT+I YD+ +N I T++QYT R+YKL K +GT R R+G +++ DN +DVECFFGILKGRFR+LKLR+ YH +E IDNIFFTCCI HNMLHTFDG+D FEEN D
Sbjct: 102 LTVLGKGNCFDDVEQLSKMSISMAQATFHKFCRHFAAEMFDEHIFSPTETYLDEFMGIFHQLGCTGACRSTDVTHIDCNMCPFTLGRSFTGKEGFPTIAYEVTVDHASRALAVTNGFTGAMNDKTVIWYDSGVNDIRTESQYTERQYKLRKANGTERTRRGCFSIV-------DN----------GYHEDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCIRHNMLHTFDGLDLFEENTD 329
BLAST of mRNA_F-serratus_M_contig1446.3164.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 322 bits (824), Expect = 3.740e-106 Identity = 152/258 (58.91%), Postives = 189/258 (73.26%), Query Frame = 1
Query: 1 QILTALQILGRGSCFDDILQLSLMSKAMAAATFHKFCKHFAMEMFEEHIYLPTGTYLDEVMGHYDKLGFTGAMGSTDVTHVGWGMCPFTLGRSFTGKEGFPTIAFQVTVDHAGRALAVTSGFTGATSDKTLICYDAAINKINTDNQYTGREYKLWKPDGTYRERKG-----------WVTLMAPSKYPADNDDVVFSRTLESVRKDVECFFGILKGRFRVLKLRIGYHSQERIDNIFFTCCILHNMLHTFDGMDKFEE 741
Q+L LQIL RG+ F DI +S +S A+TFH+FCK+FA E+++E++YLPTG L +VM YD++GF GA+GSTDVTH+ WGMCP+ R +TGKEG PT+AFQVTVDH+GR LAVT GFTGAT+DKT+I YD A+ +I TD YT ++YKL+ DG E KG W TL+ PSK P D D++FS+ LES RKDVEC+FGILKGRFR+ KL IG+H QE IDN+FFTCCILHNMLH+FD E
Sbjct: 83 QVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSE 340
BLAST of mRNA_F-serratus_M_contig1446.3164.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE) HSP 1 Score: 328 bits (841), Expect = 7.730e-106 Identity = 162/252 (64.29%), Postives = 185/252 (73.41%), Query Frame = 1
Query: 100 HKFCKHFAMEMFEEHIYLPTGTYLDEVMGHYDKLGFTGAMGSTDVTHVGWGMCPFTLGRSFTGKEGFPTIAFQVTVDHAGRALAVTSGFTGATSDKTLICYDAAINKINTDNQYTGREYKLWKPDGTYRERKG------------------------------------WVTLMAPSKYPADNDDVVFSRTLESVRKDVECFFGILKGRFRVLKLRIGYHSQERIDNIFFTCCILHNMLHTFDGMDKFEENV 747
HKFC+HFA EMF+EHIYL TGTYLDEVMG + +LG TGA GST+VTH+GW MCPFTLGRSFTGKEGFPTIA +VTVDHAGRALAVT+GFTGAT+DKT+I YD+ +NKI T++QYT REYKL K +GT R R+G WVTL+APSKYP N+D FSR LESVRKDVECFFGILKGRFR+LKLR+ YH +E IDNIFFTCCILHNMLHT + E+V
Sbjct: 246 HKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTGGXFSRHLESV 497
BLAST of mRNA_F-serratus_M_contig1446.3164.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 320 bits (820), Expect = 2.400e-104 Identity = 151/258 (58.53%), Postives = 189/258 (73.26%), Query Frame = 1
Query: 1 QILTALQILGRGSCFDDILQLSLMSKAMAAATFHKFCKHFAMEMFEEHIYLPTGTYLDEVMGHYDKLGFTGAMGSTDVTHVGWGMCPFTLGRSFTGKEGFPTIAFQVTVDHAGRALAVTSGFTGATSDKTLICYDAAINKINTDNQYTGREYKLWKPDGTYRERKG-----------WVTLMAPSKYPADNDDVVFSRTLESVRKDVECFFGILKGRFRVLKLRIGYHSQERIDNIFFTCCILHNMLHTFDGMDKFEE 741
++L LQIL RG+ F DI +S +S A+TFH+FCK+FA E+++E++YLPTG L +VM YD++GF GA+GSTDVTH+ WGMCP+ R +TGKEG PT+AFQVTVDH+GR LAVT GFTGAT+DKT+I YD A+ +I TD YT ++YKL+ DG E KG W TL+ PSK P D D++FS+ LES RKDVEC+FGILKGRFR+ KL IG+H QE IDN+FFTCCILHNMLH+FD E
Sbjct: 174 KVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSE 431
BLAST of mRNA_F-serratus_M_contig1446.3164.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 315 bits (808), Expect = 4.440e-103 Identity = 152/263 (57.79%), Postives = 187/263 (71.10%), Query Frame = 1
Query: 1 QILTALQILGRGSCFDDILQLSLMSKAMAAATFHKFCKHFAMEMFEEHIYLPT--GTYLDEVMGHYDKLGFTGAMGSTDVTHVGWGMCPFTLGRSFTGKEGFPTIAFQVTVDHAGRALAVTSGFTGATSDKTLICYDAAINKINTDNQYTGREYKLWKPDGTYRERKG-----------WVTLMAPSKYPADNDDVVFSRTLESVRKDVECFFGILKGRFRVLKLRIGYHSQERIDNIFFTCCILHNMLHTFDGMDKFEENVD 750
++L L ILGRG+ F I LS MS FH+FC+HFA EM++EHI+LP+ LD VMG Y+KLGF GAMGSTDVTH+GW CP+ GRS+TGKEG PT+ +QVTV+HAGR LAVT GFTG+T+DKT+IC D A+++I TD QY + + + K DGT KG W L+ PSKYP D++FS+ LESVRKDVECFFGILK RFR+LKL + Y QER+D +FFTCCILHNMLHT DGM EE+V+
Sbjct: 127 KVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVN 389
BLAST of mRNA_F-serratus_M_contig1446.3164.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 314 bits (804), Expect = 1.070e-102 Identity = 157/291 (53.95%), Postives = 192/291 (65.98%), Query Frame = 1
Query: 1 QILTALQILGRGSCFDDILQLSLMSKAMAAATFHKFCKHFAMEMFEEHIYLPT--GTYLDEVMGHYDKLGFTGAMGSTDVTHVGWGMCPFTLGRSFTGKEGFPTIAFQVTVDHAGRALAVTSGFTGATSDKTLICYDAAINKINTDNQYTG----------------------------REYKLWKPDGTYRERKG-----------WVTLMAPSKYPADNDDVVFSRTLESVRKDVECFFGILKGRFRVLKLRIGYHSQERIDNIFFTCCILHNMLHTFDGMDKFEENVD 750
++L L ILGRG+CF I Q+S MS FHKFC+HFA EM++E I+LPT LD VM YD+LGFTGA+GS DVTH+ W CP+ RS+TGKEGFPTIA+QVTVDHAGRA+AVT GFTG+T+DKT++C+D A+ KI TD YT + + ++ DGT KG W L+ PSKYP +D++FS+ LESVRKDVECFFGILKGRFR+LKL + Y SQERIDN+FFTC ILHNMLHTFDGMD+ EN +
Sbjct: 85 KVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTN 375 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1446.3164.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1446.3164.1 >prot_F-serratus_M_contig1446.3164.1 ID=prot_F-serratus_M_contig1446.3164.1|Name=mRNA_F-serratus_M_contig1446.3164.1|organism=Fucus serratus male|type=polypeptide|length=250bp QILTALQILGRGSCFDDILQLSLMSKAMAAATFHKFCKHFAMEMFEEHIYback to top mRNA from alignment at F-serratus_M_contig1446:116778..117731+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1446.3164.1 ID=mRNA_F-serratus_M_contig1446.3164.1|Name=mRNA_F-serratus_M_contig1446.3164.1|organism=Fucus serratus male|type=mRNA|length=954bp|location=Sequence derived from alignment at F-serratus_M_contig1446:116778..117731+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1446:116778..117731+ >mRNA_F-serratus_M_contig1446.3164.1 ID=mRNA_F-serratus_M_contig1446.3164.1|Name=mRNA_F-serratus_M_contig1446.3164.1|organism=Fucus serratus male|type=CDS|length=1500bp|location=Sequence derived from alignment at F-serratus_M_contig1446:116778..117731+ (Fucus serratus male)back to top |