mRNA_F-serratus_M_contig1446.3164.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1446.3164.1
Unique NamemRNA_F-serratus_M_contig1446.3164.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1446.3164.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 369 bits (947), Expect = 2.420e-125
Identity = 177/255 (69.41%), Postives = 204/255 (80.00%), Query Frame = 1
Query:   19 QILGRGSCFDDILQLSLMSKAMAAATFHKFCKHFAMEMFEEHIYLPTGTYLDEVMGHYDKLGFTGAMGSTDVTHVGWGMCPFTLGRSFTGKEGFPTIAFQVTVDHAGRALAVTSGFTGATSDKTLICYDAAINKINTDNQYTGREYKLWKPDGTYRERKG-----------WVTLMAPSKYPADNDDVVFSRTLESVRKDVECFFGILKGRFRVLKLRIGYHSQERIDNIFFTCCILHNMLHTFDGMDKFEENVD 750
            Q+LG+G+CFDD+ QLS MSK+MA  TFHKFC+HFA EMF+EHIYLPTGTYLDEVMG + +LG+TGA GSTDVTH+GW MCPFTLGRSFTGKEGFPTIA+ VTVDH GR LAVT+GFTGAT+DKT+I YD+ +NKI T +QYT REYKL K +GT R R+G           WVTL+APSKYP  N+D  FSR LESVRKDV CF        R+LKLR+ YH +E +DNIFFTCCILHNMLHTFDG+D FEEN D
Sbjct:   42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTD 288          
BLAST of mRNA_F-serratus_M_contig1446.3164.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 347 bits (889), Expect = 1.590e-116
Identity = 166/233 (71.24%), Postives = 195/233 (83.69%), Query Frame = 1
Query:   16 LQILGRGSCFDDILQLSLMSKAMAAATFHKFCKHFAMEMFEEHIYLPTGTYLDEVMGHYDKLGFTGAMGSTDVTHVGWGMCPFTLGRSFTGKEGFPTIAFQVTVDHAGRALAVTSGFTGATSDKTLICYDAAINKINTDNQYTGREYKLWKPDGTYRERKGWVTLMAPSKYPADNDDVVFSRTLESVRKDVECFFGILKGRFRVLKLRIGYHSQERIDNIFFTCCILHNMLHT 714
            L++LG+G+CFDD+ QLS MS+++A A FHKFC+H A EMF+EHIYLPTGTYLDEVMG + +LG TGA GSTDVTH+G  MCPFTLGRSFTGKEGFPTIA++VTVDHAGRALAVT+GF G T+DKT I YD+ +NKI T++QYT REYKL K +GT R R+G   L+  + Y   N+D  FSR LESVRKDVECFFGILKGRFR+LKLR+ YH +E IDNIFFTCCILHNMLHT
Sbjct:  137 LKVLGKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCF-LIVDNGYYESNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 368          
BLAST of mRNA_F-serratus_M_contig1446.3164.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 333 bits (855), Expect = 4.520e-111
Identity = 156/262 (59.54%), Postives = 191/262 (72.90%), Query Frame = 1
Query:    1 QILTALQILGRGSCFDDILQLSLMSKAMAAATFHKFCKHFAMEMFEEHIYLPT--GTYLDEVMGHYDKLGFTGAMGSTDVTHVGWGMCPFTLGRSFTGKEGFPTIAFQVTVDHAGRALAVTSGFTGATSDKTLICYDAAINKINTDNQYTGREYKLWKPDGTYRERKG-----------WVTLMAPSKYPADNDDVVFSRTLESVRKDVECFFGILKGRFRVLKLRIGYHSQERIDNIFFTCCILHNMLHTFDGMDKFEENV 747
            ++L  L ILGRG+CF  I Q+S MS       FHKFCKHFA EM++EHIYLP+     LD VM  YD+LGF+GAMGS DVTH+GW  CP+ L RS+TGKEG PT+ +QVTV+HAGRA+AVT GFT +T+DKT +C+DA + KI TDNQYT + + ++  DGT    KG           W  LM P+KYP   +D++FS+ LESVRKDVECFFGILKG FR+ K+ + YH QERIDN+FFTCCILHNMLHTFDGMD+  EN 
Sbjct:   98 KVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENT 359          
BLAST of mRNA_F-serratus_M_contig1446.3164.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 329 bits (844), Expect = 3.670e-108
Identity = 153/258 (59.30%), Postives = 194/258 (75.19%), Query Frame = 1
Query:    1 QILTALQILGRGSCFDDILQLSLMSKAMAAATFHKFCKHFAMEMFEEHIYLPTGTYLDEVMGHYDKLGFTGAMGSTDVTHVGWGMCPFTLGRSFTGKEGFPTIAFQVTVDHAGRALAVTSGFTGATSDKTLICYDAAINKINTDNQYTGREYKLWKPDGTYRERKG-----------WVTLMAPSKYPADNDDVVFSRTLESVRKDVECFFGILKGRFRVLKLRIGYHSQERIDNIFFTCCILHNMLHTFDGMDKFEE 741
            ++L  LQIL RG+CF DI  +S +S   AAATFH+F ++FA EM+ EHI+LPTG Y  +VM  YD+LGF+GA GSTDVTH+ WGMCP+   RS+TGKEG+PT+A+QVTVDH  R LAVT GFTG+T+DK++I YD A+ KI  D  Y+ +E+ +++ DGT  + KG           WVTL+ PSKYP D +D+ FS+ LESVRKDVECFFGI+KGRFR+LKL I YH QE IDN+FFTCCILHNMLH++D   + EE
Sbjct:  158 KVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEE 415          
BLAST of mRNA_F-serratus_M_contig1446.3164.1 vs. uniprot
Match: A0A6H5K872_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K872_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 2.290e-107
Identity = 158/245 (64.49%), Postives = 189/245 (77.14%), Query Frame = 1
Query:   16 LQILGRGSCFDDILQLSLMSKAMAAATFHKFCKHFAMEMFEEHIYLPTGTYLDEVMGHYDKLGFTGAMGSTDVTHVGWGMCPFTLGRSFTGKEGFPTIAFQVTVDHAGRALAVTSGFTGATSDKTLICYDAAINKINTDNQYTGREYKLWKPDGTYRERKGWVTLMAPSKYPADNDDVVFSRTLESVRKDVECFFGILKGRFRVLKLRIGYHSQERIDNIFFTCCILHNMLHTFDGMDKFEENVD 750
            L +LG+G+CFDD+ QLS MS +MA ATFHKFC+HFA EMF+EHI+ PT TYLDE MG + +LG TGA  STDVTH+   MCPFTLGRSFTGKEGFPTIA++VTVDHA RALAVT+GFTGA +DKT+I YD+ +N I T++QYT R+YKL K +GT R R+G  +++       DN             +DVECFFGILKGRFR+LKLR+ YH +E IDNIFFTCCI HNMLHTFDG+D FEEN D
Sbjct:  102 LTVLGKGNCFDDVEQLSKMSISMAQATFHKFCRHFAAEMFDEHIFSPTETYLDEFMGIFHQLGCTGACRSTDVTHIDCNMCPFTLGRSFTGKEGFPTIAYEVTVDHASRALAVTNGFTGAMNDKTVIWYDSGVNDIRTESQYTERQYKLRKANGTERTRRGCFSIV-------DN----------GYHEDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCIRHNMLHTFDGLDLFEENTD 329          
BLAST of mRNA_F-serratus_M_contig1446.3164.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 322 bits (824), Expect = 3.740e-106
Identity = 152/258 (58.91%), Postives = 189/258 (73.26%), Query Frame = 1
Query:    1 QILTALQILGRGSCFDDILQLSLMSKAMAAATFHKFCKHFAMEMFEEHIYLPTGTYLDEVMGHYDKLGFTGAMGSTDVTHVGWGMCPFTLGRSFTGKEGFPTIAFQVTVDHAGRALAVTSGFTGATSDKTLICYDAAINKINTDNQYTGREYKLWKPDGTYRERKG-----------WVTLMAPSKYPADNDDVVFSRTLESVRKDVECFFGILKGRFRVLKLRIGYHSQERIDNIFFTCCILHNMLHTFDGMDKFEE 741
            Q+L  LQIL RG+ F DI  +S +S    A+TFH+FCK+FA E+++E++YLPTG  L +VM  YD++GF GA+GSTDVTH+ WGMCP+   R +TGKEG PT+AFQVTVDH+GR LAVT GFTGAT+DKT+I YD A+ +I TD  YT ++YKL+  DG   E KG           W TL+ PSK P D  D++FS+ LES RKDVEC+FGILKGRFR+ KL IG+H QE IDN+FFTCCILHNMLH+FD      E
Sbjct:   83 QVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSE 340          
BLAST of mRNA_F-serratus_M_contig1446.3164.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE)

HSP 1 Score: 328 bits (841), Expect = 7.730e-106
Identity = 162/252 (64.29%), Postives = 185/252 (73.41%), Query Frame = 1
Query:  100 HKFCKHFAMEMFEEHIYLPTGTYLDEVMGHYDKLGFTGAMGSTDVTHVGWGMCPFTLGRSFTGKEGFPTIAFQVTVDHAGRALAVTSGFTGATSDKTLICYDAAINKINTDNQYTGREYKLWKPDGTYRERKG------------------------------------WVTLMAPSKYPADNDDVVFSRTLESVRKDVECFFGILKGRFRVLKLRIGYHSQERIDNIFFTCCILHNMLHTFDGMDKFEENV 747
            HKFC+HFA EMF+EHIYL TGTYLDEVMG + +LG TGA GST+VTH+GW MCPFTLGRSFTGKEGFPTIA +VTVDHAGRALAVT+GFTGAT+DKT+I YD+ +NKI T++QYT REYKL K +GT R R+G                                    WVTL+APSKYP  N+D  FSR LESVRKDVECFFGILKGRFR+LKLR+ YH +E IDNIFFTCCILHNMLHT     +  E+V
Sbjct:  246 HKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTGGXFSRHLESV 497          
BLAST of mRNA_F-serratus_M_contig1446.3164.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 320 bits (820), Expect = 2.400e-104
Identity = 151/258 (58.53%), Postives = 189/258 (73.26%), Query Frame = 1
Query:    1 QILTALQILGRGSCFDDILQLSLMSKAMAAATFHKFCKHFAMEMFEEHIYLPTGTYLDEVMGHYDKLGFTGAMGSTDVTHVGWGMCPFTLGRSFTGKEGFPTIAFQVTVDHAGRALAVTSGFTGATSDKTLICYDAAINKINTDNQYTGREYKLWKPDGTYRERKG-----------WVTLMAPSKYPADNDDVVFSRTLESVRKDVECFFGILKGRFRVLKLRIGYHSQERIDNIFFTCCILHNMLHTFDGMDKFEE 741
            ++L  LQIL RG+ F DI  +S +S    A+TFH+FCK+FA E+++E++YLPTG  L +VM  YD++GF GA+GSTDVTH+ WGMCP+   R +TGKEG PT+AFQVTVDH+GR LAVT GFTGAT+DKT+I YD A+ +I TD  YT ++YKL+  DG   E KG           W TL+ PSK P D  D++FS+ LES RKDVEC+FGILKGRFR+ KL IG+H QE IDN+FFTCCILHNMLH+FD      E
Sbjct:  174 KVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSE 431          
BLAST of mRNA_F-serratus_M_contig1446.3164.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 315 bits (808), Expect = 4.440e-103
Identity = 152/263 (57.79%), Postives = 187/263 (71.10%), Query Frame = 1
Query:    1 QILTALQILGRGSCFDDILQLSLMSKAMAAATFHKFCKHFAMEMFEEHIYLPT--GTYLDEVMGHYDKLGFTGAMGSTDVTHVGWGMCPFTLGRSFTGKEGFPTIAFQVTVDHAGRALAVTSGFTGATSDKTLICYDAAINKINTDNQYTGREYKLWKPDGTYRERKG-----------WVTLMAPSKYPADNDDVVFSRTLESVRKDVECFFGILKGRFRVLKLRIGYHSQERIDNIFFTCCILHNMLHTFDGMDKFEENVD 750
            ++L  L ILGRG+ F  I  LS MS       FH+FC+HFA EM++EHI+LP+     LD VMG Y+KLGF GAMGSTDVTH+GW  CP+  GRS+TGKEG PT+ +QVTV+HAGR LAVT GFTG+T+DKT+IC D A+++I TD QY  + + + K DGT    KG           W  L+ PSKYP    D++FS+ LESVRKDVECFFGILK RFR+LKL + Y  QER+D +FFTCCILHNMLHT DGM   EE+V+
Sbjct:  127 KVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVN 389          
BLAST of mRNA_F-serratus_M_contig1446.3164.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 314 bits (804), Expect = 1.070e-102
Identity = 157/291 (53.95%), Postives = 192/291 (65.98%), Query Frame = 1
Query:    1 QILTALQILGRGSCFDDILQLSLMSKAMAAATFHKFCKHFAMEMFEEHIYLPT--GTYLDEVMGHYDKLGFTGAMGSTDVTHVGWGMCPFTLGRSFTGKEGFPTIAFQVTVDHAGRALAVTSGFTGATSDKTLICYDAAINKINTDNQYTG----------------------------REYKLWKPDGTYRERKG-----------WVTLMAPSKYPADNDDVVFSRTLESVRKDVECFFGILKGRFRVLKLRIGYHSQERIDNIFFTCCILHNMLHTFDGMDKFEENVD 750
            ++L  L ILGRG+CF  I Q+S MS       FHKFC+HFA EM++E I+LPT     LD VM  YD+LGFTGA+GS DVTH+ W  CP+   RS+TGKEGFPTIA+QVTVDHAGRA+AVT GFTG+T+DKT++C+D A+ KI TD  YT                             + + ++  DGT    KG           W  L+ PSKYP   +D++FS+ LESVRKDVECFFGILKGRFR+LKL + Y SQERIDN+FFTC ILHNMLHTFDGMD+  EN +
Sbjct:   85 KVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTN 375          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1446.3164.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K796_9PHAE2.420e-12569.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSI7_9PHAE1.590e-11671.24DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JHI0_9PHAE4.520e-11159.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAU4_9PHAE3.670e-10859.30Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K872_9PHAE2.290e-10764.49DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5KY50_9PHAE3.740e-10658.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEB6_9PHAE7.730e-10664.29DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JPH7_9PHAE2.400e-10458.53Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE4.440e-10357.79Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE1.070e-10253.95DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1446contigF-serratus_M_contig1446:116778..117731 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score287.3
Seed ortholog evalue6.7e-75
Seed eggNOG ortholog2880.D7FSK2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Plant transposon protein
EggNOG OGs2E2RF@1,2S9YA@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size750
Cds size750
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929429.4865954-CDS-F-serratus_M_contig1446:116777..1172751622929429.4865954-CDS-F-serratus_M_contig1446:116777..117275Fucus serratus maleCDSF-serratus_M_contig1446 116778..117275 +
1690962847.794835-CDS-F-serratus_M_contig1446:116777..1172751690962847.794835-CDS-F-serratus_M_contig1446:116777..117275Fucus serratus maleCDSF-serratus_M_contig1446 116778..117275 +
1622929429.502038-CDS-F-serratus_M_contig1446:117479..1177311622929429.502038-CDS-F-serratus_M_contig1446:117479..117731Fucus serratus maleCDSF-serratus_M_contig1446 117480..117731 +
1690962847.810886-CDS-F-serratus_M_contig1446:117479..1177311690962847.810886-CDS-F-serratus_M_contig1446:117479..117731Fucus serratus maleCDSF-serratus_M_contig1446 117480..117731 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1446.3164.1prot_F-serratus_M_contig1446.3164.1Fucus serratus malepolypeptideF-serratus_M_contig1446 116778..117731 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1446.3164.1

>prot_F-serratus_M_contig1446.3164.1 ID=prot_F-serratus_M_contig1446.3164.1|Name=mRNA_F-serratus_M_contig1446.3164.1|organism=Fucus serratus male|type=polypeptide|length=250bp
QILTALQILGRGSCFDDILQLSLMSKAMAAATFHKFCKHFAMEMFEEHIY
LPTGTYLDEVMGHYDKLGFTGAMGSTDVTHVGWGMCPFTLGRSFTGKEGF
PTIAFQVTVDHAGRALAVTSGFTGATSDKTLICYDAAINKINTDNQYTGR
EYKLWKPDGTYRERKGWVTLMAPSKYPADNDDVVFSRTLESVRKDVECFF
GILKGRFRVLKLRIGYHSQERIDNIFFTCCILHNMLHTFDGMDKFEENVD
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mRNA from alignment at F-serratus_M_contig1446:116778..117731+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1446.3164.1 ID=mRNA_F-serratus_M_contig1446.3164.1|Name=mRNA_F-serratus_M_contig1446.3164.1|organism=Fucus serratus male|type=mRNA|length=954bp|location=Sequence derived from alignment at F-serratus_M_contig1446:116778..117731+ (Fucus serratus male)
CAGATTCTGACGGCCCTCCAGATCCTAGGCAGGGGTAGCTGCTTCGACGA CATCTTACAGCTGTCTTTGATGAGCAAGGCAATGGCGGCAGCGACGTTTC ACAAGTTCTGCAAGCATTTCGCGATGGAAATGTTCGAGGAGCACATCTAT CTTCCAACCGGGACATACCTGGACGAAGTGATGGGCCACTACGATAAACT GGGCTTTACCGGCGCCATGGGGTCTACCGACGTTACTCACGTTGGCTGGG GCATGTGCCCTTTCACCCTTGGGCGCTCATTCACGGGCAAGGAGGGATTT CCAACCATCGCCTTTCAAGTCACTGTCGACCATGCGGGTCGTGCGCTCGC CGTAACCAGCGGCTTCACAGGCGCGACGAGCGACAAGACTCTCATCTGCT ACGACGCGGCGATCAACAAAATCAACACTGATAACCAGTACACGGGTCGG GAGTATAAGCTCTGGAAACCGGATGGAACGTACCGGGAGCGCAAgGGGGT GCTGTTTGATCGTCGACAACGGATACCACGAGGTAAATTATTTGTACCAA TAGAAAACGTGCGAATGACACGATCACCGTTGGGAGAGGAAGTTCATGTG ACGCCCGTTATCACCGTCGGATCCAGACGTCCATAAAATCCCACCATAGT CACAACCCGCTTATTTCTTGTTTGCGGCTGTGTAACCTTCGATGCATGAC AGTGGGTGACCCTGATGGCCCCGTCCAAGTATCCGGCGGACAACGACGAC GTCGTCTTCTCCAGGACGCTTGAAAGCGTACGAAAGGATGTGGAGTGTTT TTTCGGCATCTTGAAGGGCCGTTTCAGAGTGCTGAAGCTCCGCATCGGAT ACCACTCCCAGGAACGTATTGACAACATCTTCTTCACGTGCTGTATTTTG CACAACATGCTCCACACCTTTGACGGAATGGATAAATTCGAGGAAAACGT GGAC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1446:116778..117731+

>mRNA_F-serratus_M_contig1446.3164.1 ID=mRNA_F-serratus_M_contig1446.3164.1|Name=mRNA_F-serratus_M_contig1446.3164.1|organism=Fucus serratus male|type=CDS|length=1500bp|location=Sequence derived from alignment at F-serratus_M_contig1446:116778..117731+ (Fucus serratus male)
CAGATTCTGACGGCCCTCCAGATCCTAGGCAGGGGTAGCTGCTTCGACGA
CATCTTACAGCTGTCTTTGATGAGCAAGGCAATGGCGGCAGCGACGTTTC
ACAAGTTCTGCAAGCATTTCGCGATGGAAATGTTCGAGGAGCACATCTAT
CTTCCAACCGGGACATACCTGGACGAAGTGATGGGCCACTACGATAAACT
GGGCTTTACCGGCGCCATGGGGTCTACCGACGTTACTCACGTTGGCTGGG
GCATGTGCCCTTTCACCCTTGGGCGCTCATTCACGGGCAAGGAGGGATTT
CCAACCATCGCCTTTCAAGTCACTGTCGACCATGCGGGTCGTGCGCTCGC
CGTAACCAGCGGCTTCACAGGCGCGACGAGCGACAAGACTCTCATCTGCT
ACGACGCGGCGATCAACAAAATCAACACTGATAACCAGTACACGGGTCGG
GAGTATAAGCTCTGGAAACCGGATGGAACGTACCGGGAGCGCAAgGGGCA
GATTCTGACGGCCCTCCAGATCCTAGGCAGGGGTAGCTGCTTCGACGACA
TCTTACAGCTGTCTTTGATGAGCAAGGCAATGGCGGCAGCGACGTTTCAC
AAGTTCTGCAAGCATTTCGCGATGGAAATGTTCGAGGAGCACATCTATCT
TCCAACCGGGACATACCTGGACGAAGTGATGGGCCACTACGATAAACTGG
GCTTTACCGGCGCCATGGGGTCTACCGACGTTACTCACGTTGGCTGGGGC
ATGTGCCCTTTCACCCTTGGGCGCTCATTCACGGGCAAGGAGGGATTTCC
AACCATCGCCTTTCAAGTCACTGTCGACCATGCGGGTCGTGCGCTCGCCG
TAACCAGCGGCTTCACAGGCGCGACGAGCGACAAGACTCTCATCTGCTAC
GACGCGGCGATCAACAAAATCAACACTGATAACCAGTACACGGGTCGGGA
GTATAAGCTCTGGAAACCGGATGGAACGTACCGGGAGCGCAAgGGGTGGG
TGACCCTGATGGCCCCGTCCAAGTATCCGGCGGACAACGACGACGTCGTC
TTCTCCAGGACGCTTGAAAGCGTACGAAAGGATGTGGAGTGTTTTTTCGG
CATCTTGAAGGGCCGTTTCAGAGTGCTGAAGCTCCGCATCGGATACCACT
CCCAGGAACGTATTGACAACATCTTCTTCACGTGCTGTATTTTGCACAAC
ATGCTCCACACCTTTGACGGAATGGATAAATTCGAGGAAAACGTGGACTG
GGTGACCCTGATGGCCCCGTCCAAGTATCCGGCGGACAACGACGACGTCG
TCTTCTCCAGGACGCTTGAAAGCGTACGAAAGGATGTGGAGTGTTTTTTC
GGCATCTTGAAGGGCCGTTTCAGAGTGCTGAAGCTCCGCATCGGATACCA
CTCCCAGGAACGTATTGACAACATCTTCTTCACGTGCTGTATTTTGCACA
ACATGCTCCACACCTTTGACGGAATGGATAAATTCGAGGAAAACGTGGAC
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