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Homology
BLAST of mRNA_F-serratus_M_contig1444.3162.1 vs. uniprot
Match: D7G8S6_ECTSI (GTP:AMP phosphotransferase, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8S6_ECTSI) HSP 1 Score: 324 bits (831), Expect = 7.120e-103 Identity = 156/203 (76.85%), Postives = 176/203 (86.70%), Query Frame = 1
Query: 1 PGSGKGTISGKILRDFDFAHVSTGDLLRDEVQAGSEVGHKAKTFMDQGKFVPDAIILELLLAAVEQAKSRGKHIMLDGFPRSKTQAITLKDHLQVDLVMNLDVPRNVIVERLSDRWIHTASGRVYAYSYRPPKEEGKDDATGETLVRRDDDQPEVVEQRLAKYEKTTRPLLDFYDAEGILHCFCGDKSDVIYKDVKVFLAEIL 609
PGSGKGTISGKILRDF FAH+STGDLLRDE+QAGSE G AK FMDQGKFVPD II E+L+AAVE+AK RGKHI+LDGFPRS QA LKDHL VD+VMNLDVPR +I++RL+DRWIH SGRVYAY+YRPPKE G DD TGE LVRRDDDQPEVVE+RLAKYE+TTRPLLD Y EG+LH F G++SDVIY +V+ FLAE+L
Sbjct: 45 PGSGKGTISGKILRDFHFAHISTGDLLRDEIQAGSETGKTAKEFMDQGKFVPDEIIFEVLMAAVERAKGRGKHILLDGFPRSTAQAKALKDHLPVDMVMNLDVPRQIIIDRLTDRWIHPGSGRVYAYAYRPPKEHGVDDVTGEKLVRRDDDQPEVVEERLAKYERTTRPLLDLYGEEGLLHSFSGEQSDVIYAEVRKFLAEVL 247
BLAST of mRNA_F-serratus_M_contig1444.3162.1 vs. uniprot
Match: A0A835YWM7_9STRA (GTP:AMP phosphotransferase, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWM7_9STRA) HSP 1 Score: 242 bits (617), Expect = 2.370e-71 Identity = 118/205 (57.56%), Postives = 156/205 (76.10%), Query Frame = 1
Query: 1 PGSGKGTISGKILRDFDFAHVSTGDLLRDEVQAGSEVGHKAKTFMDQGKFVPDAIILELLLAAVEQAKSRGK--HIMLDGFPRSKTQAITLKDHLQVDLVMNLDVPRNVIVERLSDRWIHTASGRVYAYSYRPPKEEGKDDATGETLVRRDDDQPEVVEQRLAKYEKTTRPLLDFYDAEGILHCFCGDKSDVIYKDVKVFLAEIL 609
PGSGKGTIS KIL+DF F HVSTGDLLR+E +AG+++G +AK++M++G VPD ++++L+ + + ++ K +++LDGFPR+ QA+ L + + VD+V++LDVPR IVERL+DRW+H SGRVYAYSYRPP++ G DDATGE LVRR+DD PEVVE RLAKYE T PLL Y GI+H F G +SD IY DV +LA L
Sbjct: 42 PGSGKGTISSKILKDFPFTHVSTGDLLREETRAGTKLGLQAKSYMERGTLVPDTLMVDLVSEVLARLRTSAKAPNLLLDGFPRTLAQALVLDEKIAVDMVLSLDVPRATIVERLTDRWVHPGSGRVYAYSYRPPQKHGVDDATGEELVRREDDSPEVVEARLAKYEATAAPLLAHYAQHGIVHTFSGTRSDEIYVDVHKYLAGAL 246
BLAST of mRNA_F-serratus_M_contig1444.3162.1 vs. uniprot
Match: B7G252_PHATC (GTP:AMP phosphotransferase, mitochondrial n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G252_PHATC) HSP 1 Score: 235 bits (600), Expect = 2.000e-69 Identity = 113/202 (55.94%), Postives = 150/202 (74.26%), Query Frame = 1
Query: 1 PGSGKGTISGKILRDFD-FAHVSTGDLLRDEVQAGSEVGHKAKTFMDQGKFVPDAIILELLLAAVEQAKSRGKHIMLDGFPRSKTQAITLKDHLQVDLVMNLDVPRNVIVERLSDRWIHTASGRVYAYSYRPPKEEGKDDATGETLVRRDDDQPEVVEQRLAKYEKTTRPLLDFYDAEGILHCFCGDKSDVIYKDVKVFLAE 603
PG GKGTISGKIL+DF F HVSTGDLLR V G+++G +AK+FM+ GK VPD++++ LL+ + G+ ++LDGFPR+ QA L++ +D V+NLD+P N IVER++DRWIH ASGR+Y+YSY+PPK GKDD TGE LV+RDDD+PE V RLA Y+K T PL+D+Y +G++ F G +SDVIY VK +L E
Sbjct: 7 PGGGKGTISGKILKDFPRFHHVSTGDLLRQHVNEGTQLGKEAKSFMESGKLVPDSLMINLLMDDAKPYIEEGRSLLLDGFPRTLQQAQALEEVAHIDTVVNLDIPTNTIVERIADRWIHPASGRIYSYSYKPPKAVGKDDVTGEPLVQRDDDKPESVRTRLAAYDKVTAPLVDWYRRKGLVQTFRGTESDVIYPQVKAYLEE 208
BLAST of mRNA_F-serratus_M_contig1444.3162.1 vs. uniprot
Match: A0A7S2URG3_9STRA (GTP:AMP phosphotransferase, mitochondrial n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2URG3_9STRA) HSP 1 Score: 235 bits (599), Expect = 9.660e-69 Identity = 113/204 (55.39%), Postives = 150/204 (73.53%), Query Frame = 1
Query: 1 PGSGKGTISGKILRDFD-FAHVSTGDLLRDEVQAGSEVGHKAKTFMDQGKFVPDAIILELLLAAVEQAKSRGKHIMLDGFPRSKTQAITLKDHLQVDLVMNLDVPRNVIVERLSDRWIHTASGRVYAYSYRPPKEEGKDDATGETLVRRDDDQPEVVEQRLAKYEKTTRPLLDFYDAEGILHCFCGDKSDVIYKDVKVFLAEIL 609
PG GKGTISGKIL+DF F H+STGD+LR V G+++G +AK +MD G+ VPD++++ +++ A G ++LDGFPR+K QA+ L L VDLV+NL VP IVER+SDRWIH+ SGRVY+YSY+PPK +GKDD TGE LV+RDDD+PE V RL +Y++ T PL+D+YDA+G+L F G SD IY +V +L E L
Sbjct: 45 PGGGKGTISGKILKDFPMFRHLSTGDVLRQHVMNGTDIGLQAKEYMDSGELVPDSLMIRIVMEDTNAAMKSGDSLLLDGFPRTKEQAVALDKELDVDLVINLCVPTETIVERISDRWIHSPSGRVYSYSYKPPKVKGKDDITGEDLVQRDDDRPECVRNRLMRYDEVTSPLVDYYDAKGVLKTFHGTMSDKIYPEVNTWLDEKL 248
BLAST of mRNA_F-serratus_M_contig1444.3162.1 vs. uniprot
Match: A0A7S4HR90_9STRA (GTP:AMP phosphotransferase, mitochondrial n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HR90_9STRA) HSP 1 Score: 238 bits (607), Expect = 2.140e-68 Identity = 113/206 (54.85%), Postives = 157/206 (76.21%), Query Frame = 1
Query: 1 PGSGKGTISGKILRDFD-FAHVSTGDLLRDEVQAGSEVGHKAKTFMDQGKFVPDAIILELLLAAVEQAKSRGKHIMLDGFPRSKTQAITLKDHLQVDLVMNLDVPRNVIVERLSDRWIHTASGRVYAYSYRPPKEEGKDDATGETLVRRDDDQPEVVEQRLAKYEKTTRPLLDFYDAEGILHCFCGDKSDVIYKDVKVFLAEILLD 615
PG GKGTIS K+L+DF F+H+STGD+LR V+ G+++G +AK FMD+G VPD +++ L++ E GK ++LDGFPR+ QA L + L VDLV+NLD+P + IV+R+S+RWIH ASGRVY Y+Y+PP+EEG DD TGE LV+RDDD+PE V +RLAKY++ T PL+D+Y ++G+L F G SDVIY +VKV+L + ++D
Sbjct: 138 PGGGKGTISNKVLKDFPMFSHLSTGDVLRQHVREGTDIGVEAKRFMDEGGLVPDELMIRLVMEDAESVVEDGKSLLLDGFPRTIDQAKALDESLNVDLVVNLDIPTDTIVQRISERWIHPASGRVYNYTYKPPREEGIDDKTGEPLVQRDDDKPESVRRRLAKYDEATAPLVDYYQSKGVLATFQGTMSDVIYPEVKVWLNDQIMD 343
BLAST of mRNA_F-serratus_M_contig1444.3162.1 vs. uniprot
Match: K0T839_THAOC (GTP:AMP phosphotransferase, mitochondrial n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T839_THAOC) HSP 1 Score: 228 bits (580), Expect = 9.560e-66 Identity = 117/204 (57.35%), Postives = 148/204 (72.55%), Query Frame = 1
Query: 1 PGSGKGTISGKILRDF-DFAHVSTGDLLRDEVQAGSEVGHKAKTFMDQGKFVPDAIILELLLAAVEQAKSRGKHIMLDGFPRSKTQAITLKDHLQVDLVMNLDVPRNVIVERLSDRWIHTASGRVYAYSYRPPKEEGKDDATGETLVRRDDDQPEVVEQRLAKYEKTTRPLLDFYDAEGILHCFCGDKSDVIYKDVKVFLAEIL 609
PG GKGTIS KIL DF F HVSTGD LR V+ +E+G +AKT+MD G VPD ++++L++ A RG++++LDGFPR+ QA L D L VDL +NL VP IVER+SDRWIH ASGRVY+YSY+PPK EG DD TG+ LV+RDDD+PE V +RL KYE+ T PL+D+Y +G+L F G SDVIY +VK +L E L
Sbjct: 57 PGGGKGTISEKILSDFPQFRHVSTGDELRQHVRNQTEIGREAKTYMDVGGLVPDKLMVKLVMNDAVDAIKRGQNLLLDGFPRTAAQARALDDKLGVDLCINLCVPDETIVERISDRWIHPASGRVYSYSYKPPKVEGLDDETGDPLVQRDDDKPESVLKRLKKYEEATMPLVDYYSKKGVLQTFQGTMSDVIYPEVKKWLDEKL 260
BLAST of mRNA_F-serratus_M_contig1444.3162.1 vs. uniprot
Match: A0A7S1VV41_9STRA (GTP:AMP phosphotransferase, mitochondrial n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VV41_9STRA) HSP 1 Score: 223 bits (567), Expect = 5.330e-64 Identity = 110/202 (54.46%), Postives = 142/202 (70.30%), Query Frame = 1
Query: 1 PGSGKGTISGKILRDFD-FAHVSTGDLLRDEVQAGSEVGHKAKTFMDQGKFVPDAIILELLLAAVEQAKSRGKHIMLDGFPRSKTQAITLKDHLQVDLVMNLDVPRNVIVERLSDRWIHTASGRVYAYSYRPPKEEGKDDATGETLVRRDDDQPEVVEQRLAKYEKTTRPLLDFYDAEGILHCFCGDKSDVIYKDVKVFLAE 603
PG GKGT+SGKIL DF H+STGDLLR V + +G +AK+FMD GK VPDA++++L++ G+ ++LDGFPR+ QA L + VDLV+NL++P + IVER++DRWIH SGRVY YSY+PPKE GKDD TGE LV+RDDDQP V RL YE T PL+ +Y +G+L F G +SDVIY VKV+L +
Sbjct: 52 PGGGKGTVSGKILEDFPKLHHISTGDLLRQHVLDETSLGMEAKSFMDDGKLVPDALMIDLVMTEATPTVEEGRSLLLDGFPRTIDQAKALDRVVNVDLVINLNIPTDTIVERIADRWIHPGSGRVYNYSYKPPKEHGKDDVTGEALVQRDDDQPHKVRTRLQAYETVTAPLVGYYADKGVLETFSGTESDVIYPMVKVWLQD 253
BLAST of mRNA_F-serratus_M_contig1444.3162.1 vs. uniprot
Match: A0A7S2H043_9STRA (GTP:AMP phosphotransferase, mitochondrial n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H043_9STRA) HSP 1 Score: 220 bits (561), Expect = 1.210e-63 Identity = 113/205 (55.12%), Postives = 146/205 (71.22%), Query Frame = 1
Query: 1 PGSGKGTISGKILRDFDFAHVSTGDLLRDEVQAGSEVGHKAKTFMDQGKFVPDAIILELLLAAVEQAKSRGKHIMLDGFPRSKTQAITLKDHLQVDLVMNLDVPRNVIVERLSDRWIHTASGRVYAYSYRPPKEEGKDDATGETLVRRDDDQPEVVEQRLAKYEKTTRPLLDFYDAEGILHCFCGDKSDVIYKDVKVFLAEILLD 615
PG GKGTIS KIL++F F H+STGD+LR + +++G +A T+M +G VPD +I+ L+L VE++ S K+++LDGFPR+ QA L HL VD+V+NL+VP + IVER+S+RWIH ASGRVYAY Y PPKE G DDAT E LV+RDDD+ E V RL YE T PL+ FY+ GIL F G++SDVIY VK +L LD
Sbjct: 17 PGGGKGTISKKILKEFSFQHLSTGDVLRQHTRNQTDIGKEAATYMARGHLVPDDLIVRLVLLEVERSNS--KNLLLDGFPRTVPQATELSQHLSVDMVLNLNVPVDTIVERISNRWIHPASGRVYAYDYNPPKELGLDDATQEPLVQRDDDKAEAVRTRLETYEALTTPLIQFYEELGILKTFSGNQSDVIYPMVKDYLISKDLD 219
BLAST of mRNA_F-serratus_M_contig1444.3162.1 vs. uniprot
Match: A0A7S2RAU8_9STRA (GTP:AMP phosphotransferase, mitochondrial n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAU8_9STRA) HSP 1 Score: 218 bits (556), Expect = 1.950e-62 Identity = 108/199 (54.27%), Postives = 138/199 (69.35%), Query Frame = 1
Query: 1 PGSGKGTISGKILRDFDFAHVSTGDLLRDEVQAGSEVGHKAKTFMDQGKFVPDAIILELLLAAVEQAKSRGKHIMLDGFPRSKTQAITLKDHLQVDLVMNLDVPRNVIVERLSDRWIHTASGRVYAYSYRPPKEEGKDDATGETLVRRDDDQPEVVEQRLAKYEKTTRPLLDFYDAEGILHCFCGDKSDVIYKDVKVFL 597
PG GKGTIS KIL+DF F H+STGD+LR V+ + +G +AK FMD G VPD +++ L+L+ +E K+ ++LDGFPR++ QA L HL VD+ +NL+VP IV R+S+RWIH SGR+YAY Y PPK G DD TGE LV+RDDD PE V +RL Y+ T PLLDFY G+L F G +SDVIY VK +L
Sbjct: 53 PGGGKGTISKKILKDFSFTHLSTGDVLRANVREATAIGQEAKGFMDSGNLVPDDLMVRLVLSELE--KTPVDRLLLDGFPRTRPQAEALGKHLHVDMALNLNVPTETIVARISNRWIHPGSGRIYAYDYNPPKVHGVDDETGEPLVQRDDDTPEAVRKRLTTYDTLTAPLLDFYGDHGVLQNFSGTESDVIYPMVKEYL 249
BLAST of mRNA_F-serratus_M_contig1444.3162.1 vs. uniprot
Match: A0A1Z5K426_FISSO (GTP:AMP phosphotransferase, mitochondrial n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K426_FISSO) HSP 1 Score: 218 bits (554), Expect = 4.720e-62 Identity = 107/200 (53.50%), Postives = 142/200 (71.00%), Query Frame = 1
Query: 1 PGSGKGTISGKILRDFD-FAHVSTGDLLRDEVQAGSEVGHKAKTFMDQGKFVPDAIILELLLAAVEQAKSRGKHIMLDGFPRSKTQAITLKDHLQVDLVMNLDVPRNVIVERLSDRWIHTASGRVYAYSYRPPKEEGKDDATGETLVRRDDDQPEVVEQRLAKYEKTTRPLLDFYDAEGILHCFCGDKSDVIYKDVKVFL 597
PG GKGTIS K+L+DF F HVSTGDLLR V+ + +G KAK +MD G+ VPD ++++L++ G+ ++LDGFPR+ QA+ L+ +D+V+NLDVP + IVERL+DRWIH ASGRVY+YSY PPK GKDD TGE LV+RDDD+PE + +RL Y T PL+ +Y+ +G+ F G KSD+IY VK FL
Sbjct: 55 PGGGKGTISKKMLKDFSSFHHVSTGDLLRQHVRQRTALGIKAKGYMDSGELVPDNLMIDLVMEDATPYLEAGQSLLLDGFPRTIEQAMALEKVTHIDVVVNLDVPTDTIVERLADRWIHPASGRVYSYSYNPPKVVGKDDITGEDLVQRDDDKPEAIRKRLESYANITAPLVKYYEDKGLAKTFSGTKSDIIYPQVKKFL 254
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1444.3162.1 vs. uniprot
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
| Match Name | E-value | Identity | Description | |
| D7G8S6_ECTSI | 7.120e-103 | 76.85 | GTP:AMP phosphotransferase, mitochondrial n=2 Tax=... | [more] |
| A0A835YWM7_9STRA | 2.370e-71 | 57.56 | GTP:AMP phosphotransferase, mitochondrial n=1 Tax=... | [more] |
| B7G252_PHATC | 2.000e-69 | 55.94 | GTP:AMP phosphotransferase, mitochondrial n=1 Tax=... | [more] |
| A0A7S2URG3_9STRA | 9.660e-69 | 55.39 | GTP:AMP phosphotransferase, mitochondrial n=1 Tax=... | [more] |
| A0A7S4HR90_9STRA | 2.140e-68 | 54.85 | GTP:AMP phosphotransferase, mitochondrial n=2 Tax=... | [more] |
| K0T839_THAOC | 9.560e-66 | 57.35 | GTP:AMP phosphotransferase, mitochondrial n=1 Tax=... | [more] |
| A0A7S1VV41_9STRA | 5.330e-64 | 54.46 | GTP:AMP phosphotransferase, mitochondrial n=1 Tax=... | [more] |
| A0A7S2H043_9STRA | 1.210e-63 | 55.12 | GTP:AMP phosphotransferase, mitochondrial n=1 Tax=... | [more] |
| A0A7S2RAU8_9STRA | 1.950e-62 | 54.27 | GTP:AMP phosphotransferase, mitochondrial n=1 Tax=... | [more] |
| A0A1Z5K426_FISSO | 4.720e-62 | 53.50 | GTP:AMP phosphotransferase, mitochondrial n=2 Tax=... | [more] |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 251.5 |
| Seed ortholog evalue | 2.7e-64 |
| Seed eggNOG ortholog | 2880.D7G8S6 |
| Preferred name | AK3 |
| KEGG rclass | RC00002 |
| KEGG ko | ko:K00939,ko:K00944 |
| KEGG Reaction | R00127,R00157,R00333,R01547,R11319 |
| KEGG Pathway | ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 |
| KEGG Module | M00049 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0001889,GO:0003674,GO:0003824,GO:0004017,GO:0004550,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005759,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006172,GO:0006213,GO:0006220,GO:0006725,GO:0006753,GO:0006754,GO:0006756,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007517,GO:0007596,GO:0007599,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009133,GO:0009135,GO:0009136,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009147,GO:0009150,GO:0009151,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009179,GO:0009180,GO:0009185,GO:0009188,GO:0009199,GO:0009200,GO:0009201,GO:0009205,GO:0009206,GO:0009208,GO:0009215,GO:0009218,GO:0009259,GO:0009260,GO:0009262,GO:0009394,GO:0009507,GO:0009526,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009570,GO:0009579,GO:0009605,GO:0009611,GO:0009941,GO:0009987,GO:0009991,GO:0015949,GO:0016020,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017144,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0021537,GO:0021549,GO:0021772,GO:0021988,GO:0022037,GO:0022607,GO:0030900,GO:0030902,GO:0031667,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031976,GO:0031984,GO:0032501,GO:0032502,GO:0034357,GO:0034641,GO:0034654,GO:0042060,GO:0042221,GO:0042278,GO:0042493,GO:0042592,GO:0042594,GO:0042651,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0046031,GO:0046033,GO:0046034,GO:0046039,GO:0046041,GO:0046051,GO:0046060,GO:0046128,GO:0046131,GO:0046390,GO:0046483,GO:0046899,GO:0046939,GO:0046940,GO:0048513,GO:0048731,GO:0048732,GO:0048856,GO:0048871,GO:0050145,GO:0050817,GO:0050878,GO:0050896,GO:0051259,GO:0051260,GO:0055035,GO:0055086,GO:0060322,GO:0061008,GO:0061061,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0072521,GO:0072522,GO:0072527,GO:0090407,GO:0097009,GO:1901068,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 |
| EggNOG free text desc. | adenylate kinase activity |
| EggNOG OGs | COG0563@1,KOG3078@2759 |
| Ec32 ortholog description | P-loop containing nucleoside triphosphate hydrolase |
| Ec32 ortholog | Ec-22_002830.1 |
| EC | 2.7.4.10,2.7.4.3 |
| COG Functional cat. | F |
| BiGG Reaction | iRC1080.CRv4_Au5_s12_g2970_t1 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko04147 |
| Exons | 7 |
| Model size | 2165 |
| Cds size | 501 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622929429.1379614-UTR-F-serratus_M_contig1444:240361..240435 | 1622929429.1379614-UTR-F-serratus_M_contig1444:240361..240435 | Fucus serratus male | UTR | F-serratus_M_contig1444 240362..240435 - |
| 1690962847.6490774-UTR-F-serratus_M_contig1444:240361..240435 | 1690962847.6490774-UTR-F-serratus_M_contig1444:240361..240435 | Fucus serratus male | UTR | F-serratus_M_contig1444 240362..240435 - |
| 1622929429.1540039-UTR-F-serratus_M_contig1444:240458..241458 | 1622929429.1540039-UTR-F-serratus_M_contig1444:240458..241458 | Fucus serratus male | UTR | F-serratus_M_contig1444 240459..241458 - |
| 1690962847.6635137-UTR-F-serratus_M_contig1444:240458..241458 | 1690962847.6635137-UTR-F-serratus_M_contig1444:240458..241458 | Fucus serratus male | UTR | F-serratus_M_contig1444 240459..241458 - |
| 1622929429.1705875-UTR-F-serratus_M_contig1444:241475..241933 | 1622929429.1705875-UTR-F-serratus_M_contig1444:241475..241933 | Fucus serratus male | UTR | F-serratus_M_contig1444 241476..241933 - |
| 1690962847.6732078-UTR-F-serratus_M_contig1444:241475..241933 | 1690962847.6732078-UTR-F-serratus_M_contig1444:241475..241933 | Fucus serratus male | UTR | F-serratus_M_contig1444 241476..241933 - |
| 1622929429.2511427-UTR-F-serratus_M_contig1444:245247..245251 | 1622929429.2511427-UTR-F-serratus_M_contig1444:245247..245251 | Fucus serratus male | UTR | F-serratus_M_contig1444 245248..245251 - |
| 1690962847.7348974-UTR-F-serratus_M_contig1444:245247..245251 | 1690962847.7348974-UTR-F-serratus_M_contig1444:245247..245251 | Fucus serratus male | UTR | F-serratus_M_contig1444 245248..245251 - |
| 1622929429.2656677-UTR-F-serratus_M_contig1444:246251..246379 | 1622929429.2656677-UTR-F-serratus_M_contig1444:246251..246379 | Fucus serratus male | UTR | F-serratus_M_contig1444 246252..246379 - |
| 1690962847.7460635-UTR-F-serratus_M_contig1444:246251..246379 | 1690962847.7460635-UTR-F-serratus_M_contig1444:246251..246379 | Fucus serratus male | UTR | F-serratus_M_contig1444 246252..246379 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622929429.1930597-CDS-F-serratus_M_contig1444:241933..242104 | 1622929429.1930597-CDS-F-serratus_M_contig1444:241933..242104 | Fucus serratus male | CDS | F-serratus_M_contig1444 241934..242104 - |
| 1690962847.6830764-CDS-F-serratus_M_contig1444:241933..242104 | 1690962847.6830764-CDS-F-serratus_M_contig1444:241933..242104 | Fucus serratus male | CDS | F-serratus_M_contig1444 241934..242104 - |
| 1622929429.208226-CDS-F-serratus_M_contig1444:243490..243553 | 1622929429.208226-CDS-F-serratus_M_contig1444:243490..243553 | Fucus serratus male | CDS | F-serratus_M_contig1444 243491..243553 - |
| 1690962847.6926558-CDS-F-serratus_M_contig1444:243490..243553 | 1690962847.6926558-CDS-F-serratus_M_contig1444:243490..243553 | Fucus serratus male | CDS | F-serratus_M_contig1444 243491..243553 - |
| 1622929429.2207587-CDS-F-serratus_M_contig1444:244567..244724 | 1622929429.2207587-CDS-F-serratus_M_contig1444:244567..244724 | Fucus serratus male | CDS | F-serratus_M_contig1444 244568..244724 - |
| 1690962847.7034292-CDS-F-serratus_M_contig1444:244567..244724 | 1690962847.7034292-CDS-F-serratus_M_contig1444:244567..244724 | Fucus serratus male | CDS | F-serratus_M_contig1444 244568..244724 - |
| 1622929429.2340612-CDS-F-serratus_M_contig1444:245137..245247 | 1622929429.2340612-CDS-F-serratus_M_contig1444:245137..245247 | Fucus serratus male | CDS | F-serratus_M_contig1444 245138..245247 - |
| 1690962847.7179039-CDS-F-serratus_M_contig1444:245137..245247 | 1690962847.7179039-CDS-F-serratus_M_contig1444:245137..245247 | Fucus serratus male | CDS | F-serratus_M_contig1444 245138..245247 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1444.3162.1 >prot_F-serratus_M_contig1444.3162.1 ID=prot_F-serratus_M_contig1444.3162.1|Name=mRNA_F-serratus_M_contig1444.3162.1|organism=Fucus serratus male|type=polypeptide|length=167bp
MDQGKFVPDAIILELLLAAVEQAKSRGKHIMLDGFPRSKTQAITLKDHLQ VDLVMNLDVPRNVIVERLSDRWIHTASGRVYAYSYRPPKEEGKDDATGET LVRRDDDQPEVVEQRLAKYEKTTRPLLDFYDAEGILHCFCGDKSDVIYKD VKVFLAEILLDQKSSK* back to topmRNA from alignment at F-serratus_M_contig1444:240362..246379- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig1444.3162.1 ID=mRNA_F-serratus_M_contig1444.3162.1|Name=mRNA_F-serratus_M_contig1444.3162.1|organism=Fucus serratus male|type=mRNA|length=6018bp|location=Sequence derived from alignment at F-serratus_M_contig1444:240362..246379- (Fucus serratus male) CCAGGGAGCGGAAAGGGGACGATATCGGGCAAGATCTTGCGAGACTTTGA
CTTCGCCCACGTCAGCACCGGCGATCTCCTCCGCGACGAGGTTCAGGCCG
GGTCGGAGGTTGGACACAAAGCCAAGACGTGAGTGAGTCATCTCTACCGC
CACCATACACCTAACACCATACATACAACAGTACATGTCCCGTCCCGAAG
TGTGTATTAATAGTGTATCAGTAGGAGTTGGACTACTAATAAGGGTACGT
ACGATGCGCGGGGCCGGCTGAAACTGAAAAATGAATCACCCCCCCAACCC
CCCCACCCCCCGCCTTCTCTACCTGAACGGTAACAACGGTTACAAGGGTA
TTCGTAATGTAACGAGGGAAGTTACTGTTGAGTCAGAAGCTTAAAAGCCT
TTGAAAGTTGAAAGCGGGTCGGGCGATTCTTGCGGGTTCAAAACGTTGTA
CAGTGAGGGTCTATTTTGCTAGGCGAACCCCACCCCACTCAATCCAGCCA
GCTTTACGTGTCGAAACGGGGGCAGATTGGCCTGACGAAACAAGTTGTAG
CGTCGGAAAGCTGGGGTCAAGGCTACATTAATTAATAGCAGCGATGAGTC
CGTTCCCCTTCGGCGGGCTACGTGCATCGCGCTCTTTGGAGGAATACGCC
GGCTCGGGACCTTCCCGCTAGACCAAATCAACGAATATCGACGGACTTGA
CTGCCTCGTCTCAACTGCCGAGTGTAGCGCCCTCCCAGGACTGTAGGCGC
ATCTCCTAGTTTAACAAAGGGACACTTGGGAATGTATATTGCTAGTTTTT
TGCCGTGTAGTTATACTAATCATATTTTATGTAATGGAAAAATTCGGGAA
ATGCGCCCTGTTTATTTTGCGGAAGTTCATGGGAAGTTGAAAGCATCGGG
GATGATATGTGGCGCCCCCCCCCCCTCCTGGTTATTTAAATGTAGAGCTA
CAATACACAGACCGCGTCACGGACGTTTCCACCAGAACACACTGACTACT
CCACGATGACGAGCCGGTACGTGCTGCCCTCTTTTCCTCTTGGTCTCCGT
CAAGCGAGCTCGAGACAGCAGCAGCTGAAGGCTATAATAACGAAAGGGTC
GTCCCGCGTCGCGCCTCGCTGTGTTCAGGTTCATGGACCAGGGGAAGTTC
GTCCCCGACGCGATCATCCTGGAGCTCTTGTTAGCCGCGGTCGAGCAAGC
GAAGAGTCGAGGGAAGCATATCATGCTCGATGGATTCCCCAGGTACTAGA
GTGTACTGCATAATGTAAGCAGGTCGTATATCTCCAGTGTCGTACGTATT
GTACGTTGAAAGGCGTACATCGCCCGAGCACATGATGCCGGACGGATGCC
CCAAGTACGTCTCTCTAGGGTCCTCCTGGACGGCTAACACGAACTATCAA
CGCACATGTATGCATCAATCAGTCACGTCGAACCGTAACAAGACAGAATT
GTTAGCGCTCTGACGGTTACTTCCTAGTTCTCCTCCCGTTGTGACAACAT
CACACTCTCTCTCTATATATAGGCTCTATATATAATACGGAGAATGTAAA
TATATATATATATATACAAACACCGGGTACCACAATATACGTACAGATAT
ATGTTTCTCGGGACACAAACCATACATAGATGTCTATACATATGTTGCGC
GACAGATCCAAGACCCAGGCGATTACCTTGAAGGATCACCTCCAGGTGGA
CTTGGTGATGAACCTGGACGTGCCTCGCAACGTGATCGTCGAGCGACTCT
CGGACCGATGGATACATACCGCATCCGGGAGAGTCTACGCGTACTCGTAT
CGCCCACCAAAGGTAGGTGACACCAATGGTAATATAAAGGCAATCCAAAG
GTAATCGCTCCATCATAGAAGCCATGAGCACAGAGGATTGCCCACAGTTT
TTTGGGTATTTTTGTCTTTCGTGGGAGAGGGAAAACCTCCTGTGTACCTA
TATTATATCTTGTAGTAGCTTGAGTTGCTTTGTAAAAATAGCCTTGAACG
TGGCATGCGCGTTTCTTGATGGAGAAGAGTTTTGTCCTATTTTTTTGTTT
GGGGGGGGGGGGGGGGGGGGCGGGAGCGGGAGCTCTACACTATTAAGAGG
TGGCGTGTTGGACTATGACTATGAAGTATAGCGCAAGAGGTGGGGAAAGT
AAAGTACGCTTGAAAGAGGTTGATCAAGTCAAGTATATACAAGCAGAAGG
GACAAGTTACGTTGACGATCGGTTTCGGTTATACATAGAATTGGAGTGAG
AAGAGAAGAGAAGTGAGTTTGCTTCGCTCTTCTCGGTGTACCGTCTAGCT
AGCGCCAATGTCATGTCATTGCCGTTATTCAAGACATACCTCACTCACCA
AGTGATTTTGGTTCAGGTACGGTTCTACGAAGGATGCTATTGGCTAGTAC
CACTCAGAGGTTACGGTTTGGGTAGGGTTCTACGAAGGATGCTATTGGCT
AGCACCACTCAGAGGTTCGACTTGGGTTCGAGTAAGGGTGCAAAATGCTA
TTAATACCTGCGATACCGCACCATCTCAAGCACAGCATTCTAAACCGATG
TGACATGCGTTAGACGCGAATATGGCTGTGATGGGATCAAGCGCAGTAAG
CGATGGATTTTGCTTGCGGTGTCCTTTTCGAAGCGGATTGTCTCGAATTC
ATTCCTCGCCGCCTGTGCATCATCTGCCTTTCTTTAGATCTCCCTCTCCC
CCCCCCCCCACCCCCTCGAAAAATGCCAACAAGATACAACAAATGAAGCG
GACGACGATTTTAACCCCCACCCTCACCCTTCCCCACCCCTGACGTATTC
GCGCTCGCTGTGCGGTGTGAGGTTAGGAGGAGGGAAAGGACGATGCCACG
GGCGAGACGCTTGTCCGGCGCGACGACGACCAACCGGAGGTATTCTTACA
AGAAGATTATAGACCAAAACAAACTTGTTTGCCACTTGAAATATATGCTT
GAAAGCAGGTGACGGGTGTTGGAAGAAAGGTGTCTCCAATCTACTTGATG
TTGCGGAGCCGTCGCTGGCGGTGGTGCTGGGGAAAGGACTTGAGGAGAAA
GGGGAACATATTTCGTTCATCCCCGGGGGCTAGTTATCCTACATCCCCGG
AGATATGTATCCCACATCTCCCGGACCTGTTGTACCCTGTTCCCGTCATA
GTGTTGTCGTTTTTACTGCTAATATCACCAGCAACCTCCCCCCCCCCCTC
TTGCCGAGCACACCCTGGAATAGCTTGGAGGTTGCTGGGGTGCGATAATG
GGGGGGTGATAAGCCTGCAAAGCACGCGTTTGCCCCTAAGGGAAAGTAAC
AATGAATCATGTGTGCAACTTTAACTACTTGGTCGAAGTATCGCGTGTCT
CCCCTTCTTCAAACCTGAAAATAACCTGAAAATAGTGTGTGCGTCATGTA
TTTGGTTTGTCAGATCGATCGATGTGGCCCCAGCAATATCGGTAACCACT
ATTTGAACGGAGATTCTACGAGGCTGCGAAGCCGCCGATGTGTCCAAAGC
TATCAGGGGGGGAGGGGGGAGGGAGTTGTTAAGGGCGGTTTTAAGGAACT
TCGTGCGTTTCATTTTTCCTCAAAAGGGTTCTGTAAGACCCGAGACACCA
GCTGCGTGTTTTTTGCCGCTGATGGGAAAAGTTAGCCCTCAACGATTGAA
CATATTCTAGTCACAGCACGTTGAAAAAGTTCCAGACCCACATCTCAACC
CACCCCTTCGTGAAGCCTTACGGGGTGTGATCCTTTCGGGAGACCTCGCG
TGACGGAGGGCTCGAGTATGATTGTTTGCAGGCTGCCACTCTTACTGTGA
TACTATGTACAGGTGAACTCGGTGTGAGCAAACCCGCGTGAAAAAAGGTA
TCGATACAGTGGGAGGGGTTTTGTAGAGATTTGCTTGGGTTTTTGAAGTT
CTTCATACTGTAGAGTCTGGGTGAGACAAAACCAGTGGGCCGGCCTGGAG
TGTTAGTGTTGTACGAAAAAGAGAAGGAATTCGCGCCCCAGGGGTATTCC
GCACTATGTTCCAAATACAGTACGCCTCACAAGAGGGTATCGATTAAAGT
GTCAGCAACGGTATTGAACATCCGGTGCTCTTCGGCCCGCCTCTCAATGC
CGCGATTCGCTCCGAGGTGTGGTGAAGGCGAGCGTAGCTGTGGTCAAGCA
CGTGTTGCGTTGTGCTGCGTGGTTTGCGAGGACGCCTATAAAAGGGTCAT
GTTGTGTATGCGCCTTCGTAGCATGACCCCACCCCGCTGTTGCTACCTCT
GTACGCTGCTGCACGCCTCTGCAAGGTGGTTGAACAGCGCCTAGCAAAGT
ACGAGAAGACGACGCGTCCGCTGCTAGACTTTTACGATGCGGAAGGGATT
CTGCACTGTTTCTGCGGGGACAAGAGCGACGTCATCTACAAGGACGTCAA
GGTCTTCCTGGCAGAAATCCTTCTCGACCAGAAATCTTCGAAGTAAACTG
TTCAATAATACTGCAAGCTCGCATAAACGATTGTCTATCTTCGCCCACTA
GCAGCAGTATCTGATTGGCTATGGAATACTGAAAAATCGCGCGTTGATCG
TCTCAAGGTGAGCGTCGTGCACGTCTAAATTCATCGTCGCAGGGACTGCT
CGGCGCTTGCCTGCTTGTCTGGCACAGCAAGACCGCGGTGTAGAACGTTC
TCTAGAGTGGGGTTTTTGTCTATAGTGCGGTGAAGCATGGTGGAGGCAAG
GGATTATTTGAACGAACGGTTTCACAACGAGACAGTATGAAGAGAGGAAC
GCCTACCAGGTGTATTCGTACGCTGTGCCGTGTAAGAACCGTTCGATTCG
GAAACAGACGTGGCTGGGTGCCTCACGCCAAGGGAGGAGAGCATGGTGAC
TTTTTACCGGGGGATGGTCCGTGCCATCTCCCCCCCCCCCCCCCCCCATC
TTTCACCTCACTACACCTCACTCCGCGATGGCAATAAGGACACATGCTGA
ATACTGTATACTGTATTCAGTACAATATCAGCAGCTCTCTTCTGACCCAT
CTTCATAGCAATGTGACGGGGAGATATGGTTAGATGGTTGCAGATGGACG
TGGTTAAAGATGAGGTTGAGGTTGGTTTAGCGAGCGATGTGCAGTTGGTG
ACATCGTTGCGCCAGGTGAAAATAGGGCCATGCCGTGGTGGTACGACCTC
ACACGGCCATGCCGCCGGGAGCGCGAAATCGGCTTTTCGGGCGTTCTGGT
GGCTGGAAGGCGGTTTCTAGAGAATATTATCGTTTTTTTTCTTTTCCAAT
GGTCTTTAGGAGGGTAGGGTACTGGGGAGTTGGAAGCGAGGACGAAGGAG
GAGCTAAACACCACACAAAAAATGCACACATACACACATGCATACCCATA
AGTAATCAGTAGCCATGGGTGCAGTTGAGCAGTGGTTGTGTCGCCGTGTC
ACTCATCGGGAAGCCTTCGGGGGGTAGTCATGTTTCTTTCCACAACATAG
AGCCACGCACCTGGAAGAGAGCCTCCCCTATGCATTAGCGTTGAGGGGCT
GTGCCCAGCGTAGTGCTACTTAACACTTGTAGTAACGAAGAATCTCAAAG
TTGCGGTGAACGGCAGGCGACTTGGGGCCAAGATTGAGTTGAGATGTGGC
GGTCGACGTGGGCATCGGTTGCGTTTGCTCCGTTGCGAAGTTTTTCGATA
CCATACCGGTTGGTGAACTGTAGCATTCCTCCAGCGAAACATAATATGTT
TTGCATCTTTTCGTCACCGTTCAGCAGTCGTCTCGTAAAAGCGAATTGAC
GTGGTTCAACTACATGCTAGAAGTTAAATCAAAAGGCGATTTCACGCTAG
AATTTAAATCATCGAATCAAAGTGTTTACTACGTCTGATACTGTATAACA
GGAAATTGGGGTCAAGACGATGGCATGCATTCAGTTGTCAGTAGTACAAT
ATATCGTGCAAGCGTAAATCTGTGCTTGATTTGGTGGTTTAAAGGGTCTA
CTTTCATCTGGGAGCCAAATTGGTCACGAGCCAGAGCTTTAGCCATCGAA
GTTGAAGGACGCGAATGC back to topCoding sequence (CDS) from alignment at F-serratus_M_contig1444:240362..246379- >mRNA_F-serratus_M_contig1444.3162.1 ID=mRNA_F-serratus_M_contig1444.3162.1|Name=mRNA_F-serratus_M_contig1444.3162.1|organism=Fucus serratus male|type=CDS|length=1002bp|location=Sequence derived from alignment at F-serratus_M_contig1444:240362..246379- (Fucus serratus male) ATGGACCAGGGGAAGTTCGTCCCCGACGCGATCATCCTGGAGCTCTTGTT AGCCGCGGTCGAGCAAGCGAAGAGTCGAGGGAAGCATATCATGCTCGATG GATTCCCCAGATGGACCAGGGGAAGTTCGTCCCCGACGCGATCATCCTGG AGCTCTTGTTAGCCGCGGTCGAGCAAGCGAAGAGTCGAGGGAAGCATATC ATGCTCGATGGATTCCCCAGATCCAAGACCCAGGCGATTACCTTGAAGGA TCACCTCCAGGTGGACTTGGTGATGAACCTGGACGTGCCTCGCAACGTGA TCGTCGAGCGACTCTCGGACCGATGGATACATACCGCATCCGGGAGAGTC TACGCGTACTCGTATCGCCCACCAAAGATCCAAGACCCAGGCGATTACCT TGAAGGATCACCTCCAGGTGGACTTGGTGATGAACCTGGACGTGCCTCGC AACGTGATCGTCGAGCGACTCTCGGACCGATGGATACATACCGCATCCGG GAGAGTCTACGCGTACTCGTATCGCCCACCAAAGGAGGAGGGAAAGGACG ATGCCACGGGCGAGACGCTTGTCCGGCGCGACGACGACCAACCGGAGGAG GAGGGAAAGGACGATGCCACGGGCGAGACGCTTGTCCGGCGCGACGACGA CCAACCGGAGGTGGTTGAACAGCGCCTAGCAAAGTACGAGAAGACGACGC GTCCGCTGCTAGACTTTTACGATGCGGAAGGGATTCTGCACTGTTTCTGC GGGGACAAGAGCGACGTCATCTACAAGGACGTCAAGGTCTTCCTGGCAGA AATCCTTCTCGACCAGAAATCTTCGAAGTAAGTGGTTGAACAGCGCCTAG CAAAGTACGAGAAGACGACGCGTCCGCTGCTAGACTTTTACGATGCGGAA GGGATTCTGCACTGTTTCTGCGGGGACAAGAGCGACGTCATCTACAAGGA CGTCAAGGTCTTCCTGGCAGAAATCCTTCTCGACCAGAAATCTTCGAAGT AA back to top
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