mRNA_F-serratus_M_contig144.3146.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig144.3146.1 vs. uniprot
Match: B3VMZ8_FUCSE (Heat shock protein 20 n=2 Tax=Fucus serratus TaxID=87148 RepID=B3VMZ8_FUCSE) HSP 1 Score: 326 bits (836), Expect = 7.580e-109 Identity = 167/187 (89.30%), Postives = 176/187 (94.12%), Query Frame = 3
Query: 84 MSLSRTGSIDPFRQAMHDVFDSMERDLVAPSGMSSRLPIINFPGSSIGLVSAIPSMGGKGGLGMNLDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADTSKASAAYVNGVLKLNFPKREPPSVRRLQIPIGDGEGAAPIGN 644
MSLSR GSIDPFR+AMHDVFDSMERDL+APSGMSSR ++FPGSS+ LVSA+PSMG +GGLGMNLDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHF+ERSYGKTTRSVRLPDTA TSKASA YVNGVLK+NFPKREPPS RRLQIPIGDGEGAAP N
Sbjct: 1 MSLSRAGSIDPFRRAMHDVFDSMERDLMAPSGMSSRFHTMDFPGSSVALVSAVPSMGVEGGLGMNLDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFLERSYGKTTRSVRLPDTAATSKASAEYVNGVLKINFPKREPPSARRLQIPIGDGEGAAPSEN 187
BLAST of mRNA_F-serratus_M_contig144.3146.1 vs. uniprot
Match: D7FUU6_ECTSI (Small heat shock protein heat shock protein 20 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUU6_ECTSI) HSP 1 Score: 177 bits (448), Expect = 3.960e-50 Identity = 94/169 (55.62%), Postives = 120/169 (71.01%), Query Frame = 3
Query: 129 MHDVFDSMERDLVAPSGMSSRLPIIN-----FPGSSIGLVSAIPSMGGKGGLGMNLDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADTSKASAAYVNGVLKLNFPKREPPSVRRLQIPIGDG 620
++DVF S+ER+++AP G++SR P FP S G G LGM+LDFHET G+EL ADLPGMKKED+ +D+D ESGVLTV+GERK E+EEK +G + RKYHFVERSYGKT+RSVRLP+ ADT+ A+A +GVL + FPK+E P R +IP+G G
Sbjct: 20 INDVFGSIEREMLAPWGLASRFPTTRDMFPTFPTSLFG--------DGSRSLGMSLDFHETKDGFELIADLPGMKKEDVSIDVDQESGVLTVSGERKSEKEEKGDGKDGDRKYHFVERSYGKTSRSVRLPEAADTATANADLTDGVLTITFPKKEAPVSSRFRIPLGGG 180
BLAST of mRNA_F-serratus_M_contig144.3146.1 vs. uniprot
Match: A0A6H5JFM4_9PHAE (HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM4_9PHAE) HSP 1 Score: 157 bits (397), Expect = 3.200e-42 Identity = 91/197 (46.19%), Postives = 119/197 (60.41%), Query Frame = 3
Query: 135 DVFDSMERDLVAPSGMSSRLPIINFPGSSIGLVSA-------------------------------IPSMG------GKGGLGMNLDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADTSKASAAYVNGVLKLNFPKREPPSVRRLQIPIG 614
DVF S+ER+++AP G++SR P + S V +PS+ G L MNLDFHET G+EL ADLPGMK+ED+ +D+D ESGVLTV+GERK EREEK + + RKYHFVERSYGKT+RSVRLP+ A+T+ A+A +GVL + FPK+E P+ R +IP+G
Sbjct: 7 DVFGSIEREMLAPWGLASRFPTASHMRYSTLRVHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXRDMVPSVSSSLFRDGSRSLDMNLDFHETKDGFELIADLPGMKQEDVSIDVDQESGVLTVSGERKSEREEKRDDKDGDRKYHFVERSYGKTSRSVRLPEAANTANANADLTDGVLTITFPKKEAPASSRFRIPLG 203
BLAST of mRNA_F-serratus_M_contig144.3146.1 vs. uniprot
Match: A0A6H5KKF0_9PHAE (HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF0_9PHAE) HSP 1 Score: 154 bits (389), Expect = 8.790e-42 Identity = 81/151 (53.64%), Postives = 107/151 (70.86%), Query Frame = 3
Query: 162 LVAPSGMSSRLPIINFPGSSIGLVSAIPSMGGKGGLGMNLDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADTSKASAAYVNGVLKLNFPKREPPSVRRLQIPIG 614
++AP G++ R P + VS+ G L MNLDFHET G+EL ADLPGMK+ED+ +D+D ESGVLTV+GERK +REEK + + RKYHFVERSYGKT+RSVRLP+ A+T+ A+A +GVL + FPK+E P+ R +IP+G
Sbjct: 1 MLAPWGLAFRFPTAR---DMVPSVSSSLFRDGSRSLDMNLDFHETKDGFELIADLPGMKQEDVSIDVDQESGVLTVSGERKSKREEKRDDKDGDRKYHFVERSYGKTSRSVRLPEAANTANANADLTDGVLTITFPKKEAPASSRFRIPLG 148
BLAST of mRNA_F-serratus_M_contig144.3146.1 vs. uniprot
Match: A0A3C1Z549_9BACT (Heat-shock protein Hsp20 n=2 Tax=Nitrospira TaxID=1234 RepID=A0A3C1Z549_9BACT) HSP 1 Score: 99.8 bits (247), Expect = 1.740e-21 Identity = 62/167 (37.13%), Postives = 93/167 (55.69%), Query Frame = 3
Query: 111 DPFRQAMHDVFDSMERDLVAPSGMSSRLPIINFPGSSIGLVSAIPSMGGKGGLGMNLDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADTSKASAAYVNGVLKLNFPKREPPSVRRLQIPI 611
DPFR+ + D+ D + R + P+ G S+G + ++ +D ET Y + A+LP +K+ED+KV + E GVLT+ GERKQE+EEK +KYH VERSYG+ R+ LPDT D SK A Y +G+L L+ PK E +++++ +
Sbjct: 7 DPFRE-LQDMSDRLNRMIANPAS-----------GGSVGQGKEVMTVAD---WTPTVDISETEAEYAIKAELPEVKREDVKVTV--EDGVLTIQGERKQEKEEKG------KKYHRVERSYGRFVRTFTLPDTVDESKVKAEYADGILHLHLPKSEKAKPKQIEVKV 150
BLAST of mRNA_F-serratus_M_contig144.3146.1 vs. uniprot
Match: A0A7C4SPX8_9PROT (Hsp20/alpha crystallin family protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A7C4SPX8_9PROT) HSP 1 Score: 98.6 bits (244), Expect = 4.170e-21 Identity = 54/112 (48.21%), Postives = 76/112 (67.86%), Query Frame = 3
Query: 276 NLDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADTSKASAAYVNGVLKLNFPKREPPSVRRLQIPI 611
N+D HE G +SADLPGM ++D++V+ID+ VLT++GERK +RE+K DN YH +ER YGK +RS LP+T DT K A NGVL+++ PKRE R+++I +
Sbjct: 43 NVDIHEDKDGINISADLPGMTQKDVQVNIDN--NVLTLSGERKLDREDKK--DN----YHRIERFYGKFSRSFSLPNTVDTEKVEAHMENGVLRIHLPKREEAKPRQIEIKV 146
BLAST of mRNA_F-serratus_M_contig144.3146.1 vs. uniprot
Match: A0A1F9FSV3_9DELT (SHSP domain-containing protein n=1 Tax=Deltaproteobacteria bacterium RBG_16_71_12 TaxID=1797848 RepID=A0A1F9FSV3_9DELT) HSP 1 Score: 98.6 bits (244), Expect = 4.170e-21 Identity = 58/112 (51.79%), Postives = 72/112 (64.29%), Query Frame = 3
Query: 279 LDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADTSKASAAYVNGVLKLNFPKREPPSVRRLQIPIG 614
+D ET + Y L A+LP MKKEDIK+ + E GVLT+TGERK EREEK+ + YH VERSYG+ RS LP D +K +A+Y NGVL + PK PP R +I IG
Sbjct: 44 VDIAETPEAYTLHAELPAMKKEDIKLAV--EDGVLTLTGERKLEREEKN------KTYHRVERSYGRFQRSFTLPAAVDEAKVTASYDNGVLNVLIPKAAPPPPRSKEIKIG 147
BLAST of mRNA_F-serratus_M_contig144.3146.1 vs. uniprot
Match: A0A0S7YIY3_9DELT (SHSP domain-containing protein n=1 Tax=Deltaproteobacteria bacterium SG8_13 TaxID=1703398 RepID=A0A0S7YIY3_9DELT) HSP 1 Score: 96.7 bits (239), Expect = 2.070e-20 Identity = 63/167 (37.72%), Postives = 92/167 (55.09%), Query Frame = 3
Query: 111 DPFRQAMHDVFDSMERDLVAPSGMSSRLPIINFPGSSIGLVSAIPSMGGKGGLGMNLDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADTSKASAAYVNGVLKLNFPKREPPSVRRLQIPI 611
DPFR+ M D+FD R L +FP V A G +D ET++ + + A++P ++KED+KV +D+ G+LT+ GERKQE+EEK+ +KYH VER YG TRS LPD D SK +AA+ +G+L L PK E + +++ +
Sbjct: 7 DPFRE-MEDMFDRYSRAL-------------SFPRRGSQEVMAT------GDWAPRVDIAETDREFTIKAEIPDVRKEDVKVTVDN--GILTIKGERKQEKEEKN------KKYHRVERWYGSFTRSFTLPDNVDESKITAAFKDGMLNLTIPKTEASKPKAIEVQV 145
BLAST of mRNA_F-serratus_M_contig144.3146.1 vs. uniprot
Match: A0A7Y8HTY7_9BACT (Hsp20/alpha crystallin family protein n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A7Y8HTY7_9BACT) HSP 1 Score: 95.9 bits (237), Expect = 4.290e-20 Identity = 62/169 (36.69%), Postives = 92/169 (54.44%), Query Frame = 3
Query: 111 DPFRQAMHDVFDSMERDLVAPSGMSSRLPIINFPGSSIGLVSA-IPSMGGKGGLGMNLDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADTSKASAAYVNGVLKLNFPKREPPSVRRLQIPIG 614
DPFR+ + DV D + + M +R + G +V+ +PS+ D ET+ Y + A++P +KKED+KV + E GVLT+ GERKQE+EEK ++YH VERSYG+ RS LPD D K A + +G+L L PK E + +++ +G
Sbjct: 7 DPFRE-LEDVSDRLNQ-------MFNRPTVARTNGKETMIVADWVPSV----------DVSETDGAYHIKAEIPDVKKEDVKVTL--EDGVLTIQGERKQEKEEKG------KRYHRVERSYGRFVRSFTLPDVVDEGKVKAEFKDGILNLELPKSEKAKPKAIEVKVG 149
BLAST of mRNA_F-serratus_M_contig144.3146.1 vs. uniprot
Match: A0A0D2UFN1_CAPO3 (Small HspC2 heat shock protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UFN1_CAPO3) HSP 1 Score: 96.7 bits (239), Expect = 4.630e-20 Identity = 54/109 (49.54%), Postives = 78/109 (71.56%), Query Frame = 3
Query: 279 LDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADTSKASAAYVNGVLKLNFPKREPPSVRRLQI 605
+D HE++ GY +SADLPGMKK++I V+ E+G+LT++GE+KQE +EKS+ YH ERS G+ +R++RLP AD+SKA+A Y +GVL L+ KR P+ R+ I
Sbjct: 76 VDVHESSDGYHISADLPGMKKDEISVNC--ENGILTISGEKKQE-QEKSDHT-----YHVFERSVGRVSRTLRLPRDADSSKANAKYTDGVLTLDIAKRALPAGSRIAI 176 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig144.3146.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig144.3146.1 >prot_F-serratus_M_contig144.3146.1 ID=prot_F-serratus_M_contig144.3146.1|Name=mRNA_F-serratus_M_contig144.3146.1|organism=Fucus serratus male|type=polypeptide|length=188bp MSLSRTGSIDPFRQAMHDVFDSMERDLVAPSGMSSRLPIINFPGSSIGLVback to top mRNA from alignment at F-serratus_M_contig144:758076..760256- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig144.3146.1 ID=mRNA_F-serratus_M_contig144.3146.1|Name=mRNA_F-serratus_M_contig144.3146.1|organism=Fucus serratus male|type=mRNA|length=2181bp|location=Sequence derived from alignment at F-serratus_M_contig144:758076..760256- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig144:758076..760256- >mRNA_F-serratus_M_contig144.3146.1 ID=mRNA_F-serratus_M_contig144.3146.1|Name=mRNA_F-serratus_M_contig144.3146.1|organism=Fucus serratus male|type=CDS|length=1128bp|location=Sequence derived from alignment at F-serratus_M_contig144:758076..760256- (Fucus serratus male)back to top |