mRNA_F-serratus_M_contig144.3145.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig144.3145.1 vs. uniprot
Match: B3VMZ8_FUCSE (Heat shock protein 20 n=2 Tax=Fucus serratus TaxID=87148 RepID=B3VMZ8_FUCSE) HSP 1 Score: 300 bits (768), Expect = 3.720e-98 Identity = 155/157 (98.73%), Postives = 156/157 (99.36%), Query Frame = 2
Query: 2 SGMSSRFHTMDFPGSSVALVSAVPSMGVEGGLGMNLDFHETDKSYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFLERSYGKTTRSVRLPDTAATSKASAEYVNGVLKINFPKREPPSARRLQIPIGDGEGAAPSEN 472
SGMSSRFHTMDFPGSSVALVSAVPSMGVEGGLGMNLDFHET+K YELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFLERSYGKTTRSVRLPDTAATSKASAEYVNGVLKINFPKREPPSARRLQIPIGDGEGAAPSEN
Sbjct: 31 SGMSSRFHTMDFPGSSVALVSAVPSMGVEGGLGMNLDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFLERSYGKTTRSVRLPDTAATSKASAEYVNGVLKINFPKREPPSARRLQIPIGDGEGAAPSEN 187
BLAST of mRNA_F-serratus_M_contig144.3145.1 vs. uniprot
Match: D7FUU6_ECTSI (Small heat shock protein heat shock protein 20 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUU6_ECTSI) HSP 1 Score: 154 bits (389), Expect = 3.900e-41 Identity = 75/118 (63.56%), Postives = 95/118 (80.51%), Query Frame = 2
Query: 95 LGMNLDFHETDKSYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFLERSYGKTTRSVRLPDTAATSKASAEYVNGVLKINFPKREPPSARRLQIPIGDG 448
LGM+LDFHET +EL ADLPGMKKED+ +D+D ESGVLTV+GERK E+EEK +G + RKYHF+ERSYGKT+RSVRLP+ A T+ A+A+ +GVL I FPK+E P + R +IP+G G
Sbjct: 63 LGMSLDFHETKDGFELIADLPGMKKEDVSIDVDQESGVLTVSGERKSEKEEKGDGKDGDRKYHFVERSYGKTSRSVRLPEAADTATANADLTDGVLTITFPKKEAPVSSRFRIPLGGG 180
BLAST of mRNA_F-serratus_M_contig144.3145.1 vs. uniprot
Match: A0A6H5KKF0_9PHAE (HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF0_9PHAE) HSP 1 Score: 148 bits (373), Expect = 3.560e-39 Identity = 72/116 (62.07%), Postives = 93/116 (80.17%), Query Frame = 2
Query: 95 LGMNLDFHETDKSYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFLERSYGKTTRSVRLPDTAATSKASAEYVNGVLKINFPKREPPSARRLQIPIG 442
L MNLDFHET +EL ADLPGMK+ED+ +D+D ESGVLTV+GERK +REEK + + RKYHF+ERSYGKT+RSVRLP+ A T+ A+A+ +GVL I FPK+E P++ R +IP+G
Sbjct: 33 LDMNLDFHETKDGFELIADLPGMKQEDVSIDVDQESGVLTVSGERKSKREEKRDDKDGDRKYHFVERSYGKTSRSVRLPEAANTANANADLTDGVLTITFPKKEAPASSRFRIPLG 148
BLAST of mRNA_F-serratus_M_contig144.3145.1 vs. uniprot
Match: A0A6H5JFM4_9PHAE (HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM4_9PHAE) HSP 1 Score: 149 bits (377), Expect = 4.960e-39 Identity = 73/116 (62.93%), Postives = 93/116 (80.17%), Query Frame = 2
Query: 95 LGMNLDFHETDKSYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFLERSYGKTTRSVRLPDTAATSKASAEYVNGVLKINFPKREPPSARRLQIPIG 442
L MNLDFHET +EL ADLPGMK+ED+ +D+D ESGVLTV+GERK EREEK + + RKYHF+ERSYGKT+RSVRLP+ A T+ A+A+ +GVL I FPK+E P++ R +IP+G
Sbjct: 88 LDMNLDFHETKDGFELIADLPGMKQEDVSIDVDQESGVLTVSGERKSEREEKRDDKDGDRKYHFVERSYGKTSRSVRLPEAANTANANADLTDGVLTITFPKKEAPASSRFRIPLG 203
BLAST of mRNA_F-serratus_M_contig144.3145.1 vs. uniprot
Match: A0A0H5R2Q1_9EUKA (SHSP domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R2Q1_9EUKA) HSP 1 Score: 97.8 bits (242), Expect = 7.880e-21 Identity = 51/109 (46.79%), Postives = 74/109 (67.89%), Query Frame = 2
Query: 101 MNLDFHETDKSYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFLERSYGKTTRSVRLPDTAATSKASAEYVNGVLKINFPKREPPSARRL 427
M ++ E DK+Y++S ++PG+ KE+IK+ +D GVLTV+ E K++R G+N++ HF ERSYG ++RS+RLP A+T K AEY NGVL I PK +P +A L
Sbjct: 30 MKMELREYDKNYQVSVEVPGIPKEEIKLSVDG--GVLTVSAEHKEQRS----GENKEEHIHFSERSYGYSSRSIRLPRNASTEKIGAEYKNGVLTIEIPKTDPKAASNL 132
BLAST of mRNA_F-serratus_M_contig144.3145.1 vs. uniprot
Match: A0A3C1Z549_9BACT (Heat-shock protein Hsp20 n=2 Tax=Nitrospira TaxID=1234 RepID=A0A3C1Z549_9BACT) HSP 1 Score: 96.3 bits (238), Expect = 4.300e-20 Identity = 49/111 (44.14%), Postives = 73/111 (65.77%), Query Frame = 2
Query: 107 LDFHETDKSYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFLERSYGKTTRSVRLPDTAATSKASAEYVNGVLKINFPKREPPSARRLQIPI 439
+D ET+ Y + A+LP +K+ED+KV + E GVLT+ GERKQE+EEK +KYH +ERSYG+ R+ LPDT SK AEY +G+L ++ PK E +++++ +
Sbjct: 48 VDISETEAEYAIKAELPEVKREDVKVTV--EDGVLTIQGERKQEKEEKG------KKYHRVERSYGRFVRTFTLPDTVDESKVKAEYADGILHLHLPKSEKAKPKQIEVKV 150
BLAST of mRNA_F-serratus_M_contig144.3145.1 vs. uniprot
Match: A0A1F9FSV3_9DELT (SHSP domain-containing protein n=1 Tax=Deltaproteobacteria bacterium RBG_16_71_12 TaxID=1797848 RepID=A0A1F9FSV3_9DELT) HSP 1 Score: 95.5 bits (236), Expect = 7.370e-20 Identity = 56/112 (50.00%), Postives = 71/112 (63.39%), Query Frame = 2
Query: 107 LDFHETDKSYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFLERSYGKTTRSVRLPDTAATSKASAEYVNGVLKINFPKREPPSARRLQIPIG 442
+D ET ++Y L A+LP MKKEDIK+ + E GVLT+TGERK EREEK+ + YH +ERSYG+ RS LP +K +A Y NGVL + PK PP R +I IG
Sbjct: 44 VDIAETPEAYTLHAELPAMKKEDIKLAV--EDGVLTLTGERKLEREEKN------KTYHRVERSYGRFQRSFTLPAAVDEAKVTASYDNGVLNVLIPKAAPPPPRSKEIKIG 147
BLAST of mRNA_F-serratus_M_contig144.3145.1 vs. uniprot
Match: UPI0009C3D03C (Hsp20/alpha crystallin family protein n=1 Tax=Alcanivorax xenomutans TaxID=1094342 RepID=UPI0009C3D03C) HSP 1 Score: 95.1 bits (235), Expect = 8.190e-20 Identity = 56/122 (45.90%), Postives = 82/122 (67.21%), Query Frame = 2
Query: 74 SMGVEGGLGMNLDFHETDKSYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFLERSYGKTTRSVRLPDTAATSKASAEYVNGVLKINFPKREPPSARRLQIPI 439
SM EG + M +D ETD +Y +SA+LPG+ KEDIKV +D+ GVLT+ GER ++ EEK+E KY+ ERS+G+ +RS LP++ A + +A+Y G+++I PK E SA R ++PI
Sbjct: 26 SMDNEGWMPM-VDVRETDAAYVVSAELPGIAKEDIKVVVDN--GVLTLQGERHRDEEEKNE------KYYRRERSFGRFSRSFSLPESVAADEITAKYREGIMEIRLPKTERQSAHRTEVPI 138
BLAST of mRNA_F-serratus_M_contig144.3145.1 vs. uniprot
Match: A0A2V6FDT2_9BACT (Heat-shock protein Hsp20 n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V6FDT2_9BACT) HSP 1 Score: 95.5 bits (236), Expect = 8.190e-20 Identity = 53/112 (47.32%), Postives = 75/112 (66.96%), Query Frame = 2
Query: 104 NLDFHETDKSYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFLERSYGKTTRSVRLPDTAATSKASAEYVNGVLKINFPKREPPSARRLQIPI 439
++D E DK + + ADLP +KKED+KV + E+GVLT+TGERK E+EEK +KYH +ERSYG TRS LPD A K +AE+ +GVLK++ PK E + +++ +
Sbjct: 47 SVDIIEDDKEWLVKADLPEIKKEDVKVTV--ENGVLTITGERKFEKEEKD------KKYHRIERSYGSFTRSFMLPDGADGVKVNAEFKDGVLKVHLPKSEKAKPKAVEVKV 150
BLAST of mRNA_F-serratus_M_contig144.3145.1 vs. uniprot
Match: D8PFX6_9BACT (Heat shock protein, Hsp20 family n=5 Tax=Nitrospira TaxID=1234 RepID=D8PFX6_9BACT) HSP 1 Score: 94.7 bits (234), Expect = 1.560e-19 Identity = 55/135 (40.74%), Postives = 77/135 (57.04%), Query Frame = 2
Query: 65 AVPSMGVEGGLGMNL----------DFHETDKSYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFLERSYGKTTRSVRLPDTAATSKASAEYVNGVLKINFPKREPPSARRLQIPI 439
A PS G G G + D ET+ Y + A+LP +KKED+KV + E VLT+ GERKQE+E+K +KYH +ERSYG+ RS LPD+ SK AEY +G+L ++ PK E +++ + I
Sbjct: 24 ARPSTGTPAGQGKEVMTVADWTPTVDISETESEYAIKAELPEVKKEDVKVTV--EDAVLTIQGERKQEKEDKG------KKYHRIERSYGRFVRSFTLPDSVDESKVRAEYADGILHLHLPKSEKAKPKQIDVKI 150 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig144.3145.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig144.3145.1 >prot_F-serratus_M_contig144.3145.1 ID=prot_F-serratus_M_contig144.3145.1|Name=mRNA_F-serratus_M_contig144.3145.1|organism=Fucus serratus male|type=polypeptide|length=156bp MSSRFHTMDFPGSSVALVSAVPSMGVEGGLGMNLDFHETDKSYELSADLPback to top mRNA from alignment at F-serratus_M_contig144:745304..746868+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig144.3145.1 ID=mRNA_F-serratus_M_contig144.3145.1|Name=mRNA_F-serratus_M_contig144.3145.1|organism=Fucus serratus male|type=mRNA|length=1565bp|location=Sequence derived from alignment at F-serratus_M_contig144:745304..746868+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig144:745304..746868+ >mRNA_F-serratus_M_contig144.3145.1 ID=mRNA_F-serratus_M_contig144.3145.1|Name=mRNA_F-serratus_M_contig144.3145.1|organism=Fucus serratus male|type=CDS|length=936bp|location=Sequence derived from alignment at F-serratus_M_contig144:745304..746868+ (Fucus serratus male)back to top |