mRNA_F-serratus_M_contig144.3142.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig144.3142.1 vs. uniprot
Match: B3VMZ8_FUCSE (Heat shock protein 20 n=2 Tax=Fucus serratus TaxID=87148 RepID=B3VMZ8_FUCSE) HSP 1 Score: 312 bits (799), Expect = 8.310e-107 Identity = 159/175 (90.86%), Postives = 166/175 (94.86%), Query Frame = 1
Query: 1 RRAMHDVFDSMDRDLMAPSGMSSRFPIIDFPGSSISVVSAVPGMGGEGGLGMNLDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFAERSYGKTTRSVRLPDTADTSKASAAYVNGVLKLNFPKREPPSARRLQIPIGDGEGESPSGN 525
RRAMHDVFDSM+RDLMAPSGMSSRF +DFPGSS+++VSAVP MG EGGLGMNLDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHF ERSYGKTTRSVRLPDTA TSKASA YVNGVLK+NFPKREPPSARRLQIPIGDGEG +PS N
Sbjct: 13 RRAMHDVFDSMERDLMAPSGMSSRFHTMDFPGSSVALVSAVPSMGVEGGLGMNLDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFLERSYGKTTRSVRLPDTAATSKASAEYVNGVLKINFPKREPPSARRLQIPIGDGEGAAPSEN 187
BLAST of mRNA_F-serratus_M_contig144.3142.1 vs. uniprot
Match: D7FUU6_ECTSI (Small heat shock protein heat shock protein 20 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUU6_ECTSI) HSP 1 Score: 178 bits (451), Expect = 1.360e-53 Identity = 92/166 (55.42%), Postives = 121/166 (72.89%), Query Frame = 1
Query: 10 MHDVFDSMDRDLMAPSGMSSRFPIID--FPGSSISVVSAVPGMGGEGGLGMNLDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFAERSYGKTTRSVRLPDTADTSKASAAYVNGVLKLNFPKREPPSARRLQIPIGDG 501
++DVF S++R+++AP G++SRFP FP S+ G LGM+LDFHET G+EL ADLPGMKKED+ +D+D ESGVLTV+GERK E+EEK +G + RKYHF ERSYGKT+RSVRLP+ ADT+ A+A +GVL + FPK+E P + R +IP+G G
Sbjct: 20 INDVFGSIEREMLAPWGLASRFPTTRDMFPTFPTSLFGD-----GSRSLGMSLDFHETKDGFELIADLPGMKKEDVSIDVDQESGVLTVSGERKSEKEEKGDGKDGDRKYHFVERSYGKTSRSVRLPEAADTATANADLTDGVLTITFPKKEAPVSSRFRIPLGGG 180
BLAST of mRNA_F-serratus_M_contig144.3142.1 vs. uniprot
Match: A0A6H5JFM4_9PHAE (HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM4_9PHAE) HSP 1 Score: 158 bits (400), Expect = 1.600e-45 Identity = 89/197 (45.18%), Postives = 118/197 (59.90%), Query Frame = 1
Query: 16 DVFDSMDRDLMAPSGMSSRFPIIDFPGSS-------------------------------------ISVVSAVPGMGGEGGLGMNLDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFAERSYGKTTRSVRLPDTADTSKASAAYVNGVLKLNFPKREPPSARRLQIPIG 495
DVF S++R+++AP G++SRFP S + VS+ G L MNLDFHET G+EL ADLPGMK+ED+ +D+D ESGVLTV+GERK EREEK + + RKYHF ERSYGKT+RSVRLP+ A+T+ A+A +GVL + FPK+E P++ R +IP+G
Sbjct: 7 DVFGSIEREMLAPWGLASRFPTASHMRYSTLRVHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXRDMVPSVSSSLFRDGSRSLDMNLDFHETKDGFELIADLPGMKQEDVSIDVDQESGVLTVSGERKSEREEKRDDKDGDRKYHFVERSYGKTSRSVRLPEAANTANANADLTDGVLTITFPKKEAPASSRFRIPLG 203
BLAST of mRNA_F-serratus_M_contig144.3142.1 vs. uniprot
Match: A0A6H5KKF0_9PHAE (HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF0_9PHAE) HSP 1 Score: 156 bits (395), Expect = 1.650e-45 Identity = 81/151 (53.64%), Postives = 108/151 (71.52%), Query Frame = 1
Query: 43 LMAPSGMSSRFPIIDFPGSSISVVSAVPGMGGEGGLGMNLDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFAERSYGKTTRSVRLPDTADTSKASAAYVNGVLKLNFPKREPPSARRLQIPIG 495
++AP G++ RFP + VS+ G L MNLDFHET G+EL ADLPGMK+ED+ +D+D ESGVLTV+GERK +REEK + + RKYHF ERSYGKT+RSVRLP+ A+T+ A+A +GVL + FPK+E P++ R +IP+G
Sbjct: 1 MLAPWGLAFRFPTAR---DMVPSVSSSLFRDGSRSLDMNLDFHETKDGFELIADLPGMKQEDVSIDVDQESGVLTVSGERKSKREEKRDDKDGDRKYHFVERSYGKTSRSVRLPEAANTANANADLTDGVLTITFPKKEAPASSRFRIPLG 148
BLAST of mRNA_F-serratus_M_contig144.3142.1 vs. uniprot
Match: A0A7C4SPX8_9PROT (Hsp20/alpha crystallin family protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A7C4SPX8_9PROT) HSP 1 Score: 97.8 bits (242), Expect = 8.250e-23 Identity = 52/112 (46.43%), Postives = 74/112 (66.07%), Query Frame = 1
Query: 157 NLDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFAERSYGKTTRSVRLPDTADTSKASAAYVNGVLKLNFPKREPPSARRLQIPI 492
N+D HE G +SADLPGM ++D++V+ID+ VLT++GERK +RE+K + YH ER YGK +RS LP+T DT K A NGVL+++ PKRE R+++I +
Sbjct: 43 NVDIHEDKDGINISADLPGMTQKDVQVNIDN--NVLTLSGERKLDREDKKDN------YHRIERFYGKFSRSFSLPNTVDTEKVEAHMENGVLRIHLPKREEAKPRQIEIKV 146
BLAST of mRNA_F-serratus_M_contig144.3142.1 vs. uniprot
Match: A0A1F9FSV3_9DELT (SHSP domain-containing protein n=1 Tax=Deltaproteobacteria bacterium RBG_16_71_12 TaxID=1797848 RepID=A0A1F9FSV3_9DELT) HSP 1 Score: 97.8 bits (242), Expect = 8.250e-23 Identity = 57/112 (50.89%), Postives = 71/112 (63.39%), Query Frame = 1
Query: 160 LDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFAERSYGKTTRSVRLPDTADTSKASAAYVNGVLKLNFPKREPPSARRLQIPIG 495
+D ET + Y L A+LP MKKEDIK+ + E GVLT+TGERK EREEK+ + YH ERSYG+ RS LP D +K +A+Y NGVL + PK PP R +I IG
Sbjct: 44 VDIAETPEAYTLHAELPAMKKEDIKLAV--EDGVLTLTGERKLEREEKN------KTYHRVERSYGRFQRSFTLPAAVDEAKVTASYDNGVLNVLIPKAAPPPPRSKEIKIG 147
BLAST of mRNA_F-serratus_M_contig144.3142.1 vs. uniprot
Match: A0A0D2UFN1_CAPO3 (Small HspC2 heat shock protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UFN1_CAPO3) HSP 1 Score: 97.8 bits (242), Expect = 1.800e-22 Identity = 54/109 (49.54%), Postives = 78/109 (71.56%), Query Frame = 1
Query: 160 LDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFAERSYGKTTRSVRLPDTADTSKASAAYVNGVLKLNFPKREPPSARRLQI 486
+D HE++ GY +SADLPGMKK++I V+ E+G+LT++GE+KQE +EKS+ YH ERS G+ +R++RLP AD+SKA+A Y +GVL L+ KR P+ R+ I
Sbjct: 76 VDVHESSDGYHISADLPGMKKDEISVNC--ENGILTISGEKKQE-QEKSDHT-----YHVFERSVGRVSRTLRLPRDADSSKANAKYTDGVLTLDIAKRALPAGSRIAI 176
BLAST of mRNA_F-serratus_M_contig144.3142.1 vs. uniprot
Match: A0A3C1Z549_9BACT (Heat-shock protein Hsp20 n=2 Tax=Nitrospira TaxID=1234 RepID=A0A3C1Z549_9BACT) HSP 1 Score: 96.7 bits (239), Expect = 2.580e-22 Identity = 50/111 (45.05%), Postives = 71/111 (63.96%), Query Frame = 1
Query: 160 LDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFAERSYGKTTRSVRLPDTADTSKASAAYVNGVLKLNFPKREPPSARRLQIPI 492
+D ET Y + A+LP +K+ED+KV + E GVLT+ GERKQE+EEK +KYH ERSYG+ R+ LPDT D SK A Y +G+L L+ PK E +++++ +
Sbjct: 48 VDISETEAEYAIKAELPEVKREDVKVTV--EDGVLTIQGERKQEKEEKG------KKYHRVERSYGRFVRTFTLPDTVDESKVKAEYADGILHLHLPKSEKAKPKQIEVKV 150
BLAST of mRNA_F-serratus_M_contig144.3142.1 vs. uniprot
Match: A0A2H5W3W2_9BACT (Spore protein SP21 n=1 Tax=bacterium HR11 TaxID=2035406 RepID=A0A2H5W3W2_9BACT) HSP 1 Score: 94.4 bits (233), Expect = 2.200e-21 Identity = 51/109 (46.79%), Postives = 69/109 (63.30%), Query Frame = 1
Query: 160 LDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFAERSYGKTTRSVRLPDTADTSKASAAYVNGVLKLNFPKREPPSARRLQI 486
+D +E +K Y + DLPG+KKED+KV + ++ VLT+ GER+ REEK YH ER YGK RS LPDT D K SA + +GVL+L PKREP + R +++
Sbjct: 53 VDVYENDKAYVVEVDLPGLKKEDVKVTL--QNNVLTIQGERRLAREEKGVD------YHRQERFYGKFLRSFTLPDTVDADKVSAEFKDGVLRLTLPKREPSAGRVIEV 153
BLAST of mRNA_F-serratus_M_contig144.3142.1 vs. uniprot
Match: A0A0S7YIY3_9DELT (SHSP domain-containing protein n=1 Tax=Deltaproteobacteria bacterium SG8_13 TaxID=1703398 RepID=A0A0S7YIY3_9DELT) HSP 1 Score: 94.0 bits (232), Expect = 2.520e-21 Identity = 59/163 (36.20%), Postives = 86/163 (52.76%), Query Frame = 1
Query: 4 RAMHDVFDSMDRDLMAPSGMSSRFPIIDFPGSSISVVSAVPGMGGEGGLGMNLDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFAERSYGKTTRSVRLPDTADTSKASAAYVNGVLKLNFPKREPPSARRLQIPI 492
R M D+FD R L FP V A G +D ET++ + + A++P ++KED+KV +D+ G+LT+ GERKQE+EEK+ +KYH ER YG TRS LPD D SK +AA+ +G+L L PK E + +++ +
Sbjct: 10 REMEDMFDRYSRAL-------------SFPRRGSQEVMAT------GDWAPRVDIAETDREFTIKAEIPDVRKEDVKVTVDN--GILTIKGERKQEKEEKN------KKYHRVERWYGSFTRSFTLPDNVDESKITAAFKDGMLNLTIPKTEASKPKAIEVQV 145 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig144.3142.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig144.3142.1 >prot_F-serratus_M_contig144.3142.1 ID=prot_F-serratus_M_contig144.3142.1|Name=mRNA_F-serratus_M_contig144.3142.1|organism=Fucus serratus male|type=polypeptide|length=173bp MHDVFDSMDRDLMAPSGMSSRFPIIDFPGSSISVVSAVPGMGGEGGLGMNback to top mRNA from alignment at F-serratus_M_contig144:701958..702794- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig144.3142.1 ID=mRNA_F-serratus_M_contig144.3142.1|Name=mRNA_F-serratus_M_contig144.3142.1|organism=Fucus serratus male|type=mRNA|length=837bp|location=Sequence derived from alignment at F-serratus_M_contig144:701958..702794- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig144:701958..702794- >mRNA_F-serratus_M_contig144.3142.1 ID=mRNA_F-serratus_M_contig144.3142.1|Name=mRNA_F-serratus_M_contig144.3142.1|organism=Fucus serratus male|type=CDS|length=1038bp|location=Sequence derived from alignment at F-serratus_M_contig144:701958..702794- (Fucus serratus male)back to top |