mRNA_F-serratus_M_contig144.3141.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig144.3141.1 vs. uniprot
Match: B3VMZ8_FUCSE (Heat shock protein 20 n=2 Tax=Fucus serratus TaxID=87148 RepID=B3VMZ8_FUCSE) HSP 1 Score: 297 bits (760), Expect = 3.760e-99 Identity = 152/177 (85.88%), Postives = 159/177 (89.83%), Query Frame = 1
Query: 211 PFRRAMHDVFDSMERDLVAPSGMGSRFPFIGFPGSSIGLVSAVPGMGGERGLGMNLDFHETKKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKHEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADTSKASAAYANGVLKLKFPRRESPSARRIQIPIGDGELAAPPGN 741
PFRRAMHDVFDSMERDL+APSGM SRF + FPGSS+ LVSAVP MG E GLGMNLDFHET KGYELSADLPGMKKEDIKVDIDSESGVLTVTGERK EREEKSEGDNEQRKYHF+ERSYGKTTRSVRLPDTA TSKASA Y NGVLK+ FP+RE PSARR+QIPIGDGE AAP N
Sbjct: 11 PFRRAMHDVFDSMERDLMAPSGMSSRFHTMDFPGSSVALVSAVPSMGVEGGLGMNLDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFLERSYGKTTRSVRLPDTAATSKASAEYVNGVLKINFPKREPPSARRLQIPIGDGEGAAPSEN 187
BLAST of mRNA_F-serratus_M_contig144.3141.1 vs. uniprot
Match: D7FUU6_ECTSI (Small heat shock protein heat shock protein 20 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUU6_ECTSI) HSP 1 Score: 186 bits (473), Expect = 2.240e-55 Identity = 97/169 (57.40%), Postives = 125/169 (73.96%), Query Frame = 1
Query: 226 MHDVFDSMERDLVAPSGMGSRFP-----FIGFPGSSIGLVSAVPGMGGERGLGMNLDFHETKKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKHEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADTSKASAAYANGVLKLKFPRRESPSARRIQIPIGDG 717
++DVF S+ER+++AP G+ SRFP F FP S G G R LGM+LDFHETK G+EL ADLPGMKKED+ +D+D ESGVLTV+GERK E+EEK +G + RKYHFVERSYGKT+RSVRLP+ ADT+ A+A +GVL + FP++E+P + R +IP+G G
Sbjct: 20 INDVFGSIEREMLAPWGLASRFPTTRDMFPTFPTSLFG--------DGSRSLGMSLDFHETKDGFELIADLPGMKKEDVSIDVDQESGVLTVSGERKSEKEEKGDGKDGDRKYHFVERSYGKTSRSVRLPEAADTATANADLTDGVLTITFPKKEAPVSSRFRIPLGGG 180
BLAST of mRNA_F-serratus_M_contig144.3141.1 vs. uniprot
Match: A0A6H5JFM4_9PHAE (HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM4_9PHAE) HSP 1 Score: 164 bits (416), Expect = 1.920e-46 Identity = 92/197 (46.70%), Postives = 121/197 (61.42%), Query Frame = 1
Query: 232 DVFDSMERDLVAPSGMGSRFPFIGFPGSS-------------------------------------IGLVSAVPGMGGERGLGMNLDFHETKKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKHEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADTSKASAAYANGVLKLKFPRRESPSARRIQIPIG 711
DVF S+ER+++AP G+ SRFP S + VS+ G R L MNLDFHETK G+EL ADLPGMK+ED+ +D+D ESGVLTV+GERK EREEK + + RKYHFVERSYGKT+RSVRLP+ A+T+ A+A +GVL + FP++E+P++ R +IP+G
Sbjct: 7 DVFGSIEREMLAPWGLASRFPTASHMRYSTLRVHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXRDMVPSVSSSLFRDGSRSLDMNLDFHETKDGFELIADLPGMKQEDVSIDVDQESGVLTVSGERKSEREEKRDDKDGDRKYHFVERSYGKTSRSVRLPEAANTANANADLTDGVLTITFPKKEAPASSRFRIPLG 203
BLAST of mRNA_F-serratus_M_contig144.3141.1 vs. uniprot
Match: A0A6H5KKF0_9PHAE (HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF0_9PHAE) HSP 1 Score: 161 bits (408), Expect = 5.380e-46 Identity = 83/151 (54.97%), Postives = 111/151 (73.51%), Query Frame = 1
Query: 259 LVAPSGMGSRFPFIGFPGSSIGLVSAVPGMGGERGLGMNLDFHETKKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKHEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADTSKASAAYANGVLKLKFPRRESPSARRIQIPIG 711
++AP G+ RFP + VS+ G R L MNLDFHETK G+EL ADLPGMK+ED+ +D+D ESGVLTV+GERK +REEK + + RKYHFVERSYGKT+RSVRLP+ A+T+ A+A +GVL + FP++E+P++ R +IP+G
Sbjct: 1 MLAPWGLAFRFPTAR---DMVPSVSSSLFRDGSRSLDMNLDFHETKDGFELIADLPGMKQEDVSIDVDQESGVLTVSGERKSKREEKRDDKDGDRKYHFVERSYGKTSRSVRLPEAANTANANADLTDGVLTITFPKKEAPASSRFRIPLG 148
BLAST of mRNA_F-serratus_M_contig144.3141.1 vs. uniprot
Match: A0A7C4SPX8_9PROT (Hsp20/alpha crystallin family protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A7C4SPX8_9PROT) HSP 1 Score: 101 bits (251), Expect = 5.550e-23 Identity = 53/112 (47.32%), Postives = 75/112 (66.96%), Query Frame = 1
Query: 373 NLDFHETKKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKHEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADTSKASAAYANGVLKLKFPRRESPSARRIQIPI 708
N+D HE K G +SADLPGM ++D++V+ID+ VLT++GERK +RE+K + YH +ER YGK +RS LP+T DT K A NGVL++ P+RE R+I+I +
Sbjct: 43 NVDIHEDKDGINISADLPGMTQKDVQVNIDN--NVLTLSGERKLDREDKKDN------YHRIERFYGKFSRSFSLPNTVDTEKVEAHMENGVLRIHLPKREEAKPRQIEIKV 146
BLAST of mRNA_F-serratus_M_contig144.3141.1 vs. uniprot
Match: A0A3C1Z549_9BACT (Heat-shock protein Hsp20 n=2 Tax=Nitrospira TaxID=1234 RepID=A0A3C1Z549_9BACT) HSP 1 Score: 100 bits (250), Expect = 8.670e-23 Identity = 62/166 (37.35%), Postives = 91/166 (54.82%), Query Frame = 1
Query: 211 PFRRAMHDVFDSMERDLVAPSGMGSRFPFIGFPGSSIGLVSAVPGMGGERGLGMNLDFHETKKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKHEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADTSKASAAYANGVLKLKFPRRESPSARRIQIPI 708
PFR + D+ D + R + P+ GS +G + + P +D ET+ Y + A+LP +K+ED+KV + E GVLT+ GERK E+EEK +KYH VERSYG+ R+ LPDT D SK A YA+G+L L P+ E ++I++ +
Sbjct: 8 PFRE-LQDMSDRLNRMIANPASGGS----VGQGKEVMTVADWTP----------TVDISETEAEYAIKAELPEVKREDVKVTV--EDGVLTIQGERKQEKEEKG------KKYHRVERSYGRFVRTFTLPDTVDESKVKAEYADGILHLHLPKSEKAKPKQIEVKV 150
BLAST of mRNA_F-serratus_M_contig144.3141.1 vs. uniprot
Match: A0A3B8Q2D4_9BACT (Heat-shock protein Hsp20 n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A3B8Q2D4_9BACT) HSP 1 Score: 99.8 bits (247), Expect = 2.390e-22 Identity = 56/135 (41.48%), Postives = 83/135 (61.48%), Query Frame = 1
Query: 319 IGLVSAVPGMGGERGLGMN-----LDFHETKKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKHEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADTSKASAAYANGVLKLKFPRRESPSARRIQIPI 708
+GL PG GG+ + + +D E K + + ADLP +KKED+K+ + E+GVLT+TGERK E+EEKS +KYH +ER+YG RS LPD AD +K +A + +GVLK+ P+ E + I++ +
Sbjct: 24 LGLTPGRPGSGGQEAMTVTEWAPRVDIAEDDKEWLVKADLPEVKKEDVKLTV--ENGVLTITGERKFEKEEKS------KKYHRIERAYGNFLRSFTLPDAADAAKVTAEFKDGVLKVHLPKSEIAKPKSIEVKV 150
BLAST of mRNA_F-serratus_M_contig144.3141.1 vs. uniprot
Match: A0A532ENZ7_9BACT (Hsp20/alpha crystallin family protein n=1 Tax=Nitrospira sp. TaxID=70125 RepID=A0A532ENZ7_9BACT) HSP 1 Score: 97.4 bits (241), Expect = 1.720e-21 Identity = 51/113 (45.13%), Postives = 71/113 (62.83%), Query Frame = 1
Query: 373 NLDFHETKKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKHEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADTSKASAAYANGVLKLKFPRRESPSARRIQIPIG 711
++D ET Y++ A++P +KKED+KV + E GVLT+ GERKHE+EEK +KYH VERSYG RS LPD D K A + +GVL L+ P+ E + I++ +G
Sbjct: 45 SVDVSETDGEYQIKAEIPDVKKEDVKVTL--EDGVLTIQGERKHEKEEKG------KKYHRVERSYGSFARSFTLPDLVDEEKVRAEFKDGVLNLQLPKSEKAKPKAIEVKVG 149
BLAST of mRNA_F-serratus_M_contig144.3141.1 vs. uniprot
Match: A0A1G1KV52_9BACT (Heat-shock protein Hsp20 n=1 Tax=Nitrospirae bacterium RIFCSPLOWO2_12_FULL_63_8 TaxID=1801718 RepID=A0A1G1KV52_9BACT) HSP 1 Score: 96.7 bits (239), Expect = 2.440e-21 Identity = 53/112 (47.32%), Postives = 69/112 (61.61%), Query Frame = 1
Query: 376 LDFHETKKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKHEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADTSKASAAYANGVLKLKFPRRESPSARRIQIPIG 711
+D ET Y++ A+LP +KKED+KV + E GVLT++GER+HE EEK +KYH VERSYG RS LPD D +K A Y +GVL L P+ E + I + IG
Sbjct: 34 VDIAETDAEYQIKAELPEVKKEDVKVTV--EDGVLTISGERRHETEEKG------KKYHRVERSYGSFVRSFTLPDHVDDAKVKAEYKDGVLHLYLPKSEKAKPKAIDVKIG 137
BLAST of mRNA_F-serratus_M_contig144.3141.1 vs. uniprot
Match: A0A1F9FSV3_9DELT (SHSP domain-containing protein n=1 Tax=Deltaproteobacteria bacterium RBG_16_71_12 TaxID=1797848 RepID=A0A1F9FSV3_9DELT) HSP 1 Score: 96.3 bits (238), Expect = 4.480e-21 Identity = 56/112 (50.00%), Postives = 71/112 (63.39%), Query Frame = 1
Query: 376 LDFHETKKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKHEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADTSKASAAYANGVLKLKFPRRESPSARRIQIPIG 711
+D ET + Y L A+LP MKKEDIK+ + E GVLT+TGERK EREEK+ + YH VERSYG+ RS LP D +K +A+Y NGVL + P+ P R +I IG
Sbjct: 44 VDIAETPEAYTLHAELPAMKKEDIKLAV--EDGVLTLTGERKLEREEKN------KTYHRVERSYGRFQRSFTLPAAVDEAKVTASYDNGVLNVLIPKAAPPPPRSKEIKIG 147 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig144.3141.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig144.3141.1 >prot_F-serratus_M_contig144.3141.1 ID=prot_F-serratus_M_contig144.3141.1|Name=mRNA_F-serratus_M_contig144.3141.1|organism=Fucus serratus male|type=polypeptide|length=229bp MADPSVNNKSESRIRDADMASESLIRDTNMSSESPIRDVDMARSSRTGSIback to top mRNA from alignment at F-serratus_M_contig144:687291..689647- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig144.3141.1 ID=mRNA_F-serratus_M_contig144.3141.1|Name=mRNA_F-serratus_M_contig144.3141.1|organism=Fucus serratus male|type=mRNA|length=2357bp|location=Sequence derived from alignment at F-serratus_M_contig144:687291..689647- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig144:687291..689647- >mRNA_F-serratus_M_contig144.3141.1 ID=mRNA_F-serratus_M_contig144.3141.1|Name=mRNA_F-serratus_M_contig144.3141.1|organism=Fucus serratus male|type=CDS|length=1374bp|location=Sequence derived from alignment at F-serratus_M_contig144:687291..689647- (Fucus serratus male)back to top |