mRNA_F-serratus_M_contig1393.2834.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1393.2834.1 vs. uniprot
Match: A0A6H5K2J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2J5_9PHAE) HSP 1 Score: 346 bits (887), Expect = 1.760e-114 Identity = 183/224 (81.70%), Postives = 202/224 (90.18%), Query Frame = 1
Query: 1 MALRTVAAVRCCTRPAVTRSFASAAKGATATGEEHFPPLKLYGIPARYANATYTAASKAGQLDLVQRDLDAFQHLITSNVNFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSAVTKNLLLTMAGNNRLGEADKVIDAFTRMLKAKKGEVDAIVTTAEPLSPQQEKSLAAGLKAQVGEDKKIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMKTLMQDSVTS 672
MALR +AA RCC TRSFA+AA ATA H PPLKLYGIPARYANATY+AASKAG+L++VQRDLDAFQH+I +N NFKAYLTNPTVSRSAKV+MVDKAFDAKSKTS+VTKNLLL MAGN RL +A+KVIDA+TRMLKAKKGE+DAIVTTAEPL+PQQEK+LAAGLKAQ+G ++ IVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMKTLMQDSV S
Sbjct: 71 MALR-LAAERCCVGKTATRSFATAASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVEMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMKTLMQDSVAS 293
BLAST of mRNA_F-serratus_M_contig1393.2834.1 vs. uniprot
Match: D7FJT6_ECTSI (ATP synthase O subunit, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJT6_ECTSI) HSP 1 Score: 346 bits (887), Expect = 3.050e-114 Identity = 183/224 (81.70%), Postives = 202/224 (90.18%), Query Frame = 1
Query: 1 MALRTVAAVRCCTRPAVTRSFASAAKGATATGEEHFPPLKLYGIPARYANATYTAASKAGQLDLVQRDLDAFQHLITSNVNFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSAVTKNLLLTMAGNNRLGEADKVIDAFTRMLKAKKGEVDAIVTTAEPLSPQQEKSLAAGLKAQVGEDKKIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMKTLMQDSVTS 672
MALR +AA RCC TRSFA+AA ATA H PPLKLYGIPARYANATY+AASKAG+L++VQRDLDAFQH+I +N NFKAYLTNPTVSRSAKV+MVDKAFDAKSKTS+VTKNLLL MAGN RL +A+KVIDA+TRMLKAKKGE+DAIVTTAEPL+PQQEK+LAAGLKAQ+G ++ IVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMKTLMQDSV S
Sbjct: 87 MALR-LAAERCCVGKTATRSFATAASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVEMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMKTLMQDSVAS 309
BLAST of mRNA_F-serratus_M_contig1393.2834.1 vs. uniprot
Match: A0A836CGT7_9STRA (OSCP/delta subunit of ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGT7_9STRA) HSP 1 Score: 236 bits (601), Expect = 1.660e-72 Identity = 132/222 (59.46%), Postives = 165/222 (74.32%), Query Frame = 1
Query: 1 MALRTVAAVRCCTRPAVTRSFASAAKGATATGEEHFPPLKLYGIPARYANATYTAASKAGQLDLVQRDLDAFQHLITSNVNFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSAVTKNLLLTMAGNNRLGEADKVIDAFTRMLKAKKGEVDAIVTTAEPLSPQQEKSLAAGLKAQVGEDKKIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMKTLMQDSV 666
MALR +AA RP R+FASAA A +H PPLKL+GIPARYANATYTAASKAG+LD V+ DL AF +IT N F +YL+NPTV+R+ KV +++ FD K T +++NL TMA N RL +A +VI AFT ++KAK+GEVDAIVTTAEPLS QEK+L A LK QVG+ KI L+T+V+ AL+GGLTVQIGDKFMDLSI++KI S+K + +V
Sbjct: 1 MALRQLAARAA--RPLCARTFASAAAAA-----DHSPPLKLFGIPARYANATYTAASKAGKLDAVEADLAAFGAIITRNAEFSSYLSNPTVTRADKVALIESVFDGKHTTD-ISRNLFTTMAANARLSDARRVIGAFTELMKAKRGEVDAIVTTAEPLSAAQEKALIAALKKQVGDTAKIALETKVDAALIGGLTVQIGDKFMDLSIATKIKSVKNTLAGTV 214
BLAST of mRNA_F-serratus_M_contig1393.2834.1 vs. uniprot
Match: A0A7S2HDJ6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HDJ6_9STRA) HSP 1 Score: 174 bits (441), Expect = 1.040e-48 Identity = 89/187 (47.59%), Postives = 130/187 (69.52%), Query Frame = 1
Query: 91 TGEEHFPPLKLYGIPARYANATYTAASKAGQLDLVQRDLDAFQHLITSNVNFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSAVTKNLLLTMAGNNRLGEADKVIDAFTRMLKAKKGEVDAIVTTAEPLSPQQEKSLAAGLKAQVGEDKKIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMKTL 651
+ + H PP+ LYG+ ARYANA Y AASK+ LD V+ +L A + TS+ FK +L NP +SR K V AK S VT NL+ T+AGN RL E K++D++ +++KAK+GEV+A + +A+PL+ Q +++AA +K QVGE K +VL TEV+P+++GGL VQIGD+F+DLS+ SKI ++ +
Sbjct: 23 SSDAHKPPIDLYGLHARYANAAYVAASKSSTLDAVESELLAIKASATSSPAFKTFLENPLISRDEKEAQVKDMLAAK--VSPVTLNLMSTLAGNARLAETPKIVDSYVQLMKAKRGEVEATIISADPLTKAQTEAVAAAMKNQVGEGKTVVLSTEVDPSILGGLQVQIGDQFLDLSVGSKIDAVSRM 207
BLAST of mRNA_F-serratus_M_contig1393.2834.1 vs. uniprot
Match: A0A1Z5JD87_FISSO (F-type H+-transporting ATPase subunit O n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JD87_FISSO) HSP 1 Score: 172 bits (436), Expect = 5.510e-48 Identity = 97/207 (46.86%), Postives = 135/207 (65.22%), Query Frame = 1
Query: 40 RPAVTRSFASAAKGATATGEEHFPPLKLYGIPARYANATYTAASKAGQLDLVQRDLDAFQHLITSNVNFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSAVTKNLLLTMAGNNRLGEADKVIDAFTRMLKAKKGEVDAIVTTAEPLSPQQEKSLAAGLKAQVGEDKKIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMKTLMQD 660
+P V R S AK + +T EH P + L+GI ARYANATY AASKAG+LD V+ +L +K L NP ++R AKVD K D K S VT+NLL+TMAGN RL + KV+ F +++KAK+GEVDA + +AEPLS Q K++ + +QV + KK+V++ +P++VGGL VQIGD+F+DLS+ S+I + T+ D
Sbjct: 5 QPFVQRVSMSVAKRSFSTPAEHKPLITLHGIHARYANATYVAASKAGKLDNVEAELKGLAAAAGKPGAWKTLLENPLIARQAKVDACAKLDD---KLSPVTRNLLVTMAGNARLADLPKVVSTFEQLMKAKRGEVDAKIISAEPLSAAQLKAVEKAMASQVPKGKKVVIQAVTDPSIVGGLQVQIGDQFLDLSVKSRIEEISTMSVD 208
BLAST of mRNA_F-serratus_M_contig1393.2834.1 vs. uniprot
Match: A0A7S0AD47_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AD47_9STRA) HSP 1 Score: 171 bits (433), Expect = 8.030e-48 Identity = 87/177 (49.15%), Postives = 125/177 (70.62%), Query Frame = 1
Query: 103 HFPPLKLYGIPARYANATYTAASKAGQLDLVQRDLDAFQHLITSNVNFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSAVTKNLLLTMAGNNRLGEADKVIDAFTRMLKAKKGEVDAIVTTAEPLSPQQEKSLAAGLKAQVGEDKKIVLKTEVNPALVGGLTVQIGDKFMDLSISSKI 633
H PPL+L+G+ ARYANA YT+ASK+GQLD V+ +L A ++ F +L NP +SRS+K V K S VT NL+ T+AGN RL EA K++D ++R++KA +GEV A + +A+PL+ Q ++A+ +K QVG KK+VL TEV+P+++GGL VQIGD+F+DLS+ S+I
Sbjct: 5 HRPPLQLHGLHARYANAVYTSASKSGQLDKVEGELLAIASTAATSPAFAQFLENPLISRSSKEKTVTDLLSGK--VSPVTLNLMTTLAGNARLSEAPKIVDTYSRLMKAARGEVSATIISADPLTKAQTDAVASAMKGQVGAGKKVVLSTEVDPSILGGLQVQIGDQFLDLSVKSRI 179
BLAST of mRNA_F-serratus_M_contig1393.2834.1 vs. uniprot
Match: A0A7S4MZM0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MZM0_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.300e-47 Identity = 86/185 (46.49%), Postives = 127/185 (68.65%), Query Frame = 1
Query: 88 ATGEEHFPPLKLYGIPARYANATYTAASKAGQLDLVQRDLDAFQHLITSNVNFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSAVTKNLLLTMAGNNRLGEADKVIDAFTRMLKAKKGEVDAIVTTAEPLSPQQEKSLAAGLKAQVGEDKKIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASM 642
A EH PP+ L+GI ARYANATY AASK+G LD V+ +L A + TS+ F ++L NP +SR K V K + VT NL+ T+AGN RL + K++D + +++KAK+GEV+A++ +A+ L+ Q ++AA +K Q G KK+VL T+V+P ++GGL +QIGD+F+DLS+SSKI ++
Sbjct: 26 AVAAEHRPPVDLHGIHARYANATYVAASKSGTLDKVETELAAIKATATSSPAFASFLENPLISRDNKEAQVQDMLGG-GKVTPVTLNLMTTLAGNARLADVPKIVDTYVQLMKAKRGEVEAVIISADKLTKAQTDAVAAAMKGQAGAGKKVVLSTKVDPTIIGGLQIQIGDQFLDLSVSSKIDAL 209
BLAST of mRNA_F-serratus_M_contig1393.2834.1 vs. uniprot
Match: A0A6U5IKY9_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5IKY9_9STRA) HSP 1 Score: 170 bits (431), Expect = 3.020e-47 Identity = 86/181 (47.51%), Postives = 125/181 (69.06%), Query Frame = 1
Query: 100 EHFPPLKLYGIPARYANATYTAASKAGQLDLVQRDLDAFQHLITSNVNFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSAVTKNLLLTMAGNNRLGEADKVIDAFTRMLKAKKGEVDAIVTTAEPLSPQQEKSLAAGLKAQVGEDKKIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASM 642
EH P + LYGI ARYANA Y AASK+ LDLV+ +L + Q N F YL NPT++R KV + K S VT NL+ T+AGN RL + KV+D++ +++KAK+GEV+A + +AEPL+ Q ++A +K QV + KK++L T+V+P+++GGL VQIGD+F+DLS+S KI+++
Sbjct: 25 EHKPLINLYGINARYANAAYIAASKSKSLDLVETELLSIQKTAHDNAEFGDYLKNPTIARKDKVSAMTSLLS--EKMSPVTVNLMTTLAGNARLADTTKVVDSYIQLMKAKRGEVEATIISAEPLTKAQSDAIATAMKGQVPKGKKVILSTQVDPSILGGLQVQIGDQFLDLSVSGKISTI 203
BLAST of mRNA_F-serratus_M_contig1393.2834.1 vs. uniprot
Match: A0A7S4D8J3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8J3_HETAK) HSP 1 Score: 171 bits (433), Expect = 5.960e-47 Identity = 98/198 (49.49%), Postives = 126/198 (63.64%), Query Frame = 1
Query: 40 RPAVTRSFASAAKGATATGEEHFPPLKLYGIPARYANATYTAASKAGQLDLVQRDLDAFQHLITSNVNFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSAVTKNLLLTMAGNNRLGEADKVIDAFTRMLKAKKGEVDAIVTTAEPLSPQQEKSLAAGLKAQVGEDKKIVLKTEVNPALVGGLTVQIGDKFMDLSISSKI 633
R A+ A+AA+ A AT H PP +L+G+ ARYANA Y AASKAG L+ V+ ++ FQH++ N F AYL NPTVSR AKV VDK F A S S++T+NLL MA N RLGE KV+ A+ +++AK+G + L+AQVG K I+L T V+PA+VGGL VQIGDK MDLS+S+KI
Sbjct: 49 RAALPLRTATAAR-AFATEAAHMPPKRLFGLHARYANALYVAASKAGALEQVETEVLGFQHMLAKNAEFAAYLRNPTVSREAKVGAVDKLF-AGSSVSSLTQNLLSAMASNARLGETGKVVSAYAELMRAKRGXXXXXXXXXXXXXXXXXXKVTKALEAQVGAGKSILLTTAVDPAIVGGLVVQIGDKVMDLSVSTKI 244
BLAST of mRNA_F-serratus_M_contig1393.2834.1 vs. uniprot
Match: A0A7R9UCJ0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCJ0_9STRA) HSP 1 Score: 167 bits (422), Expect = 1.270e-45 Identity = 92/183 (50.27%), Postives = 124/183 (67.76%), Query Frame = 1
Query: 97 EEHFPPLKLYGIPARYANATYTAASKAGQLDLVQRDLDAFQHLITSNVNFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSAVTKNLLLTMAGNNRLGEADKVIDAFTRMLKAKKGEVDAIVTTAEPLSPQQEKSLAAGLKAQVGEDKKIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMK 645
+ H PP+KL+G+ ARYANA YTAASK G LD V+ ++ A ++ SN F A L NPTV R AKV +D + S+VTKNLLLTMA N RL E DKV + F ++KAKKG VDA VT+A L+ Q+ ++ L+A + ++I + +V+P L+GGL VQIGDK+MDLS++SKI +K
Sbjct: 47 DAHNPPVKLFGLTARYANAAYTAASKEGSLDQVETEIAAIGSVLKSNAAFAATLANPTVGRDAKVAYLDGILG--DRMSSVTKNLLLTMAANARLDELDKVTENFGDLMKAKKGIVDATVTSAAKLTKAQKTAIRKALEATLESGQQIEMDAKVDPKLLGGLQVQIGDKYMDLSVASKIDRIK 227 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1393.2834.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1393.2834.1 >prot_F-serratus_M_contig1393.2834.1 ID=prot_F-serratus_M_contig1393.2834.1|Name=mRNA_F-serratus_M_contig1393.2834.1|organism=Fucus serratus male|type=polypeptide|length=225bp MALRTVAAVRCCTRPAVTRSFASAAKGATATGEEHFPPLKLYGIPARYANback to top mRNA from alignment at F-serratus_M_contig1393:56776..59534+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1393.2834.1 ID=mRNA_F-serratus_M_contig1393.2834.1|Name=mRNA_F-serratus_M_contig1393.2834.1|organism=Fucus serratus male|type=mRNA|length=2759bp|location=Sequence derived from alignment at F-serratus_M_contig1393:56776..59534+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1393:56776..59534+ >mRNA_F-serratus_M_contig1393.2834.1 ID=mRNA_F-serratus_M_contig1393.2834.1|Name=mRNA_F-serratus_M_contig1393.2834.1|organism=Fucus serratus male|type=CDS|length=1350bp|location=Sequence derived from alignment at F-serratus_M_contig1393:56776..59534+ (Fucus serratus male)back to top |