mRNA_F-serratus_M_contig1348.2581.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1348.2581.1 vs. uniprot
Match: D7FKF2_ECTSI (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKF2_ECTSI) HSP 1 Score: 274 bits (701), Expect = 7.530e-89 Identity = 132/192 (68.75%), Postives = 159/192 (82.81%), Query Frame = 1
Query: 172 MSLMSALFHESQAKERAAERRRSAKYGGEKDKDTIVNLAEPNIPGVLTKKIVKPGNGEIPPVFSTVKVHYTGKLRDGTVFDSSAGRAPISFALGKGEVIRGWDFAVSTMQKGEKAIVTVGPNYGYGAEGSGPIPPNATLTFEMEVVEWNKPPILEWFQWIGLGAMLAIIVYVLFFDDEKDILKKSLESDREL 747
M+L+S LFHE +AK R AE RR KYGGE+ D++++L+E +IPGVL KKIV+PGNGE+PPV S+V VHYTGKL+DGT FD+SAGR PI FALGKGEVIRGWD+AVSTMQKGE+AI+TVGP YGYG +GPIP NATLTFEMEV+ W K P+ + +QW GL M+ I++YVLF DDE DIL+KSLES REL
Sbjct: 1 MALISGLFHEGEAKTRLAEERRDQKYGGEQKVDSMIDLSEESIPGVLMKKIVRPGNGELPPVGSSVSVHYTGKLKDGTEFDTSAGRGPIKFALGKGEVIRGWDYAVSTMQKGERAILTVGPEYGYGGRATGPIPANATLTFEMEVMGWEKAPVFQIYQWAGLIFMIGIVIYVLFVDDEGDILRKSLESSREL 192
BLAST of mRNA_F-serratus_M_contig1348.2581.1 vs. uniprot
Match: A0A6T0HFP5_EMIHU (Peptidylprolyl isomerase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6T0HFP5_EMIHU) HSP 1 Score: 131 bits (330), Expect = 9.060e-34 Identity = 70/132 (53.03%), Postives = 91/132 (68.94%), Query Frame = 1
Query: 310 LTKKIVKPGNGEIPPVFSTVKVHYTGKLRDGTVFDSSAGRA-PISFALGKGEVIRGWDFAVSTMQKGEKAIVTVGPNYGYGAEGSGPIPPNATLTFEMEVVEWNKPPILEWFQWIGLGAM----LAIIVYVL 690
LTK++V+ G GE P +V+VHYTG L DG+VFDSS R PI F LG GEVI GWD VS+MQ GE A++T+ P +GYG+ G+GPIPPNATLTFE+E+V P + F++ GL + L +I+Y L
Sbjct: 10 LTKRVVRAGTGECPSEGQSVEVHYTGSLADGSVFDSSRSRGKPIDFTLGMGEVIPGWDLGVSSMQVGEAAVLTIPPEFGYGSSGAGPIPPNATLTFEVELVSAADPALPASFKY-GLPVVALFALGLIIYHL 140
BLAST of mRNA_F-serratus_M_contig1348.2581.1 vs. uniprot
Match: A0A8J5XEN7_DIALT (Peptidylprolyl isomerase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XEN7_DIALT) HSP 1 Score: 124 bits (310), Expect = 9.600e-31 Identity = 61/104 (58.65%), Postives = 75/104 (72.12%), Query Frame = 1
Query: 310 LTKKIVKPGNGEIPPVFSTVKVHYTGKLRDGTVFDSSAGRA-PISFALGKGEVIRGWDFAVSTMQKGEKAIVTVGPNYGYGAEGSGPIPPNATLTFEMEVVEWN 618
LTKK+ + GNG+ P STV VHYTGKL DG VFDSS R P SF L +G VI GWD V+TM GE+A++T+ P GYG+ GPIPPN+TLTFE+E+V W+
Sbjct: 16 LTKKVTRAGNGQRAPSGSTVNVHYTGKLADGKVFDSSRTRGQPFSFELEQGNVIAGWDRGVATMTVGEQAVLTIAPELGYGSRAVGPIPPNSTLTFEVELVSWS 119
BLAST of mRNA_F-serratus_M_contig1348.2581.1 vs. uniprot
Match: A0A1W4XGW9_AGRPL (Peptidylprolyl isomerase n=1 Tax=Agrilus planipennis TaxID=224129 RepID=A0A1W4XGW9_AGRPL) HSP 1 Score: 123 bits (309), Expect = 6.770e-28 Identity = 63/108 (58.33%), Postives = 79/108 (73.15%), Query Frame = 1
Query: 304 GVLTKKIVKPGNG-EIPPVFSTVKVHYTGKLRDGTVFDSSAGR-APISFALGKGEVIRGWDFAVSTMQKGEKAIVTVGPNYGYGAEGSGP-IPPNATLTFEMEVVEWN 618
G + K+I+KPG G E PP S V+VHYTG L DGT FDSS R P F LGKG VI+GWD V+TM+KGE+AI+T+ P+Y YG GS P IPP+ATL F++EV++W
Sbjct: 15 GAVLKRIIKPGTGDECPPNGSQVRVHYTGTLLDGTKFDSSRDRDKPFQFNLGKGNVIKGWDIGVATMKKGEQAILTIAPDYAYGKTGSPPNIPPDATLKFDIEVIDWK 122
BLAST of mRNA_F-serratus_M_contig1348.2581.1 vs. uniprot
Match: A0A7J9BZP9_GOSGO (Peptidylprolyl isomerase (Fragment) n=1 Tax=Gossypium gossypioides TaxID=34282 RepID=A0A7J9BZP9_GOSGO) HSP 1 Score: 110 bits (274), Expect = 2.530e-25 Identity = 59/107 (55.14%), Postives = 71/107 (66.36%), Query Frame = 1
Query: 310 LTKKIVKPGNG-EIPPVFSTVKVHYTGKLRDGTVFDSSAGRA-PISFALGKGEVIRGWDFAVSTMQKGEKAIVTVGPNYGYGAEGSGP-IPPNATLTFEMEVVEWNK 621
L KK+VK G G E P V+VHYTG L DGT FDSS R P FALG+G+VI+GWD + TM+KGE AI T+ P YG GS P IPPNATL F++E++ W
Sbjct: 37 LKKKLVKEGEGWENPETGDEVEVHYTGTLLDGTKFDSSRDRGTPFKFALGQGQVIKGWDEGIKTMKKGENAIFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTS 143
BLAST of mRNA_F-serratus_M_contig1348.2581.1 vs. uniprot
Match: A0A078B956_STYLE (Peptidylprolyl isomerase n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078B956_STYLE) HSP 1 Score: 107 bits (268), Expect = 3.080e-25 Identity = 54/105 (51.43%), Postives = 74/105 (70.48%), Query Frame = 1
Query: 310 LTKKIVKPGNGEIPPVFSTVKVHYTGKLRDGTVFDSSAGRA-PISFALGKGEVIRGWDFAVSTMQKGEKAIVTVGPNYGYGAEG-SGPIPPNATLTFEMEVVEWN 618
T + + G G + P +TV VHYTGKL +GTVFDSS R P+ F +G+G+VIRGWD + +QKG+KA++T PNY YGA G G IPPNATL F++E++++
Sbjct: 4 FTVEKLNEGTGPVCPKGATVFVHYTGKLTNGTVFDSSIPRGEPLEFVVGEGQVIRGWDEGICQLQKGQKAVLTCPPNYAYGASGIGGVIPPNATLIFDVELIDFT 108
BLAST of mRNA_F-serratus_M_contig1348.2581.1 vs. uniprot
Match: A0A0C9S0Q4_AMBAM (Peptidylprolyl isomerase (Fragment) n=1 Tax=Amblyomma americanum TaxID=6943 RepID=A0A0C9S0Q4_AMBAM) HSP 1 Score: 108 bits (271), Expect = 3.180e-25 Identity = 58/107 (54.21%), Postives = 74/107 (69.16%), Query Frame = 1
Query: 304 GVLTKKIVKPGNGEIPPVF-STVKVHYTGKLRDGTVFDSSAGRAPISFALGKGEVIRGWDFAVSTMQKGEKAIVTVGPNYGYGAEGSGP-IPPNATLTFEMEVVEWN 618
GVL K+IV+ G G+ P+ ++V VHYTGKL DGT FDSS R F LG G VI+ W+ + TM+KGE AI T +YGYG +GS P IPPNATL FE+E+++W
Sbjct: 1 GVL-KEIVRAGTGDETPLDGNSVSVHYTGKLLDGTEFDSSRKRGKFDFTLGNGSVIKAWEIGIKTMKKGEVAIFTCQSDYGYGVQGSPPKIPPNATLIFEVELLDWK 106
BLAST of mRNA_F-serratus_M_contig1348.2581.1 vs. uniprot
Match: A0A5J4YBN5_9CHLO (Peptidylprolyl isomerase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YBN5_9CHLO) HSP 1 Score: 116 bits (290), Expect = 5.790e-25 Identity = 76/178 (42.70%), Postives = 100/178 (56.18%), Query Frame = 1
Query: 268 DTIVNLAEPNIPGVLTKKIVKPGNG-EIPPVFSTVKVHYTGKLR-DGTVFDSSAGR-APISFALGKGEVIRGWDFAVSTMQKGEKAIVTVGPNYGYGAEGSGP-IPPNATLTFEMEVVEWN--------------KPPILEWFQWIGLGAMLAIIV-YVLFFDDEKDILKKSLESDRE 744
DT+ G LTK+I+K G G E P + V VHYTG L+ +GT FDSS R P F LGKG+VI+GWD V TM+KGEKA++T+ P YGYG +GS P IP NATL FE+E++ WN K + E W + ++V Y + D+ +LK+S E E
Sbjct: 20 DTLDQEERLTADGGLTKRILKVGTGWEKPELGDQVFVHYTGTLKSNGTKFDSSVDRNEPFKFDLGKGQVIKGWDEGVKTMKKGEKAVLTIQPEYGYGEQGSPPTIPANATLQFEVELLSWNSVKDITPAKDGGIIKTIVTEGEGWASPKDIDEVLVRYSVLNQDKSSMLKQSPEQGTE 197
BLAST of mRNA_F-serratus_M_contig1348.2581.1 vs. uniprot
Match: C1FIA7_MICCC (Peptidylprolyl isomerase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FIA7_MICCC) HSP 1 Score: 107 bits (267), Expect = 6.640e-25 Identity = 59/113 (52.21%), Postives = 73/113 (64.60%), Query Frame = 1
Query: 292 PNIPGVLTKKIVKPGNG-EIPPVFSTVKVHYTGKLRDGTVFDSSAGRA-PISFALGKGEVIRGWDFAVSTMQKGEKAIVTVGPNYGYGAEGSGP-IPPNATLTFEMEVVEWNK 621
P G + KK+ K G G E P + V VHY G L DGT FDSS R PI F LG G+VI+GWD V++M+KGEKA +T+ P YGYG G+G IP ATL F++E+VEW
Sbjct: 11 PKRDGGVVKKVTKDGEGTERPGKGAEVAVHYVGTLEDGTKFDSSVDRGEPIRFTLGVGQVIKGWDLGVASMRKGEKATLTIKPEYGYGDAGAGGVIPGGATLLFDVELVEWKS 123
BLAST of mRNA_F-serratus_M_contig1348.2581.1 vs. uniprot
Match: A0A6G0XMX1_9STRA (Peptidylprolyl isomerase n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0XMX1_9STRA) HSP 1 Score: 106 bits (265), Expect = 7.930e-25 Identity = 56/98 (57.14%), Postives = 67/98 (68.37%), Query Frame = 1
Query: 331 PGNGEIPPVFSTVKVHYTGKLRDGTVFDSSAGR-APISFALGKGEVIRGWDFAVSTMQKGEKAIVTVGPNYGYGAEG-SGPIPPNATLTFEMEVVEWN 618
PGNGE P +HYTGKL DGTVFDSS + P F LG G VIRGWD V+ M KGEKA++T+ +YGYGA G G IPPNATL FE+ + ++N
Sbjct: 10 PGNGEKPRTGQNCVMHYTGKLEDGTVFDSSYKKNRPFQFPLGVGRVIRGWDEGVAQMSKGEKAVLTISGDYGYGARGVPGVIPPNATLIFEVHLEDFN 107 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1348.2581.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1348.2581.1 >prot_F-serratus_M_contig1348.2581.1 ID=prot_F-serratus_M_contig1348.2581.1|Name=mRNA_F-serratus_M_contig1348.2581.1|organism=Fucus serratus male|type=polypeptide|length=193bp MSLMSALFHESQAKERAAERRRSAKYGGEKDKDTIVNLAEPNIPGVLTKKback to top mRNA from alignment at F-serratus_M_contig1348:81805..89663- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1348.2581.1 ID=mRNA_F-serratus_M_contig1348.2581.1|Name=mRNA_F-serratus_M_contig1348.2581.1|organism=Fucus serratus male|type=mRNA|length=7859bp|location=Sequence derived from alignment at F-serratus_M_contig1348:81805..89663- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1348:81805..89663- >mRNA_F-serratus_M_contig1348.2581.1 ID=mRNA_F-serratus_M_contig1348.2581.1|Name=mRNA_F-serratus_M_contig1348.2581.1|organism=Fucus serratus male|type=CDS|length=1158bp|location=Sequence derived from alignment at F-serratus_M_contig1348:81805..89663- (Fucus serratus male)back to top |