mRNA_F-serratus_M_contig130.2236.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig130.2236.1 vs. uniprot
Match: A0A6H5JUH3_9PHAE (Conserved oligomeric Golgi complex subunit 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUH3_9PHAE) HSP 1 Score: 850 bits (2197), Expect = 2.910e-295 Identity = 551/849 (64.90%), Postives = 606/849 (71.38%), Query Frame = 3
Query: 84 SGGAAVVMFEERFEQFYLQLSEGKTGGMVACVDEMQRIIDSI-QRE-------PSSGQAXXXXXXXXXM---AAVYEEMLQDCRRKAGEATLERLRKLCQRLGRPGA-----AGEVDELGAEGMAEEETVVVSYHAALLGRAESAANIYGGFLRNRLKQENDAAVKHLSSVRALYRLSLASGXXXXXXXXXXXXXXXXXXXXXXXXXXXADPHPHLTALATVLGEGSKLMARLAESSLGQGVEEPVTRLLHEDSKSQAVKVLEWFQHDADLPKWQAQVSGGTTGSGRATTSRASPPSTSGNGRSAVGGDMGRDKGRRGGGASTAAIGTEGSVGTSFDARGVDFVIDEMALACQYCQRYVDFVADDLGLREEPTSGFFMQVRVIEGAYVQLEVAYCLRSVEEAMRIAEPIEVQDGTYVSSMVEDASFLVHKSLRRSVSTRSEQAIMAVCNRITEILDPHAPEPSFYGGLATEADHRVPLGA-EVGKDDADLERKRQPDDFSTALAK------ALDEA--ENAELRGKEGATVAATRGDDRHGAGAGFGGVEGAMVGINSVHVALSSVSAIQDALDRFLESSNPLVRLMLDEVARILRAYRELRDSRLNDLLEALYPPVSKALANVFGSSSYAVGPTEYELRSADLPGARRVLNMATQSMVGDEEGTAGDLKGAGGAAGGCCRAALLQEPFEELVRSLARRIADAIEAAVRSKGGQRTRGGDGGNTASVSRGSAMTGTGFTEWGALLLRKEVRTLQQGLASLMETDSLNSEFADINELVRLLNFERPSDAVEYRPPPAPRRPG--GSAGNRGDDRG---------LSPERVKEILRMRVDFQREAINALDL 2522
SGG FEERFEQFYLQL+EGKTGGMVACVDEMQRI+DS QRE P S A XXXXX AAVY+EMLQDCRRKAGE TL+RLRKLCQ+L RP A G + G + EEETVVVSYHAALLG+AE AANIYGGFLRNRLKQ NDAAVK LSS+R LYRLSLASGXXXXXXXXXXXXXXXXXXXXXXXXXX ADPHPH+TALATVLGEGSKLM RLAESSLG GV EPV LLH+DSK+QAVK+LEWFQHDADLPKWQAQVSG R RA+ EG FDARG+DFVIDEMALACQYC RY+DFVADDLGL E+ +S F+ QVR+ EGAYVQLE AYCLRSVEEAMRIAEPIEVQDGTYVSSMVEDASFLVHKSLRRSVSTRSEQAIMAVCNR+TEILDPHAPEPSFYGGLATEADHRVP+G E G+ D + +QP+DFSTALAK AL+EA E++ RG EG+ G AG GFG VEGAMVGINSVHVALSSVSAIQDAL+RFLE+SNPLV LMLDEVARILR+Y+ELRDSRLND+LEAL PPVS A+AN FGSSSYA+GP +YELRS DLPGARRVL+ AT++M G + GFTEWGALLLRKEVRTLQQGLA+LMETDSL++EF D+NELVRLLNFERP+DA++YRPPPAPRRPG GSAG G G +S ERVKE+LR+R +FQREAI+AL+L
Sbjct: 35 SGGLLEATFEERFEQFYLQLAEGKTGGMVACVDEMQRIVDSTRQREQQLDPVKPPSAAAPPQGXXXXXXSPSAAVYDEMLQDCRRKAGEVTLDRLRKLCQKLSRPDANRHDDGGRMGGDGGTALGEEETVVVSYHAALLGKAEGAANIYGGFLRNRLKQANDAAVKKLSSLRPLYRLSLASGXXXXXXXXXXXXXXXXXXXXXXXXXX-ADPHPHITALATVLGEGSKLMVRLAESSLGDGVMEPVAELLHKDSKTQAVKILEWFQHDADLPKWQAQVSG------RTAVERAAXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXEGL----FDARGMDFVIDEMALACQYCHRYLDFVADDLGLPEDQSSEFYAQVRLTEGAYVQLEDAYCLRSVEEAMRIAEPIEVQDGTYVSSMVEDASFLVHKSLRRSVSTRSEQAIMAVCNRVTEILDPHAPEPSFYGGLATEADHRVPVGGGEGGRGDGEKGSDQQPNDFSTALAKWDCGGWALEEAADEHSGPRG-EGSGNGGAAGIW---AGEGFGEVEGAMVGINSVHVALSSVSAIQDALNRFLEASNPLVGLMLDEVARILRSYKELRDSRLNDVLEALSPPVSSAIANAFGSSSYALGPAQYELRSGDLPGARRVLHAATRAMTGSDSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------XXXXXXXXXXXXXXGFTEWGALLLRKEVRTLQQGLAALMETDSLSTEFGDLNELVRLLNFERPADALDYRPPPAPRRPGDNGSAGVNGGGGGRIGDGGNASVSSERVKEVLRLRAEFQREAIDALEL 855
BLAST of mRNA_F-serratus_M_contig130.2236.1 vs. uniprot
Match: D8LT95_ECTSI (Conserved oligomeric Golgi complex subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT95_ECTSI) HSP 1 Score: 556 bits (1432), Expect = 1.050e-185 Identity = 319/495 (64.44%), Postives = 355/495 (71.72%), Query Frame = 3
Query: 1077 MALACQYCQRYVDFVADDLGLREEPTSGFFMQVRVIEGAYVQLEVAYCLRSVEEAMRIAEPIEVQDGTYVSSMVEDASFLVHKSLRRSVSTRSEQAIMAVCNRITEILDPHAPEPSFYGGLATEADHRVPLGAEVGKDDADLERKRQPDDFSTALAKALDEAENAELRGKEGATVAATRGDDRHGAGAGFGGVEGAMVGINSVHVALSSVSAIQDALDRFLESSNPLVRLMLDEVARILRAYRELRDSRLNDLLEALYPPVSKALANVFGSSSYAVGPTEYELRSADLPGARRVLNMATQSMVGDEEG--TAGDLKGAGGAAGGCCRAALLQEPFEELVRSLARRIADAIEAAVRSKGGQRTRGGDGGNTASVSRGSAMTGTGFTEWGALLLRKEVRTLQQGLASLMETDSLNSEFADINELVRLLNFERPSDAVEYRPPPAPRRP---------GGSAGNRGD--DRGLSPERVKEILRMRVDFQREAINALDL 2522
MALACQYC RY+DFVADDLGL E+ +S F+ QVR+IEGAYVQLE AYCLRSVEEAMRIAEPIEVQDGTYVSSMVEDASFLVHKSLRRSVSTRSEQAIMAVCNR+TEILDPHAPEPSF+GGLATEADHRVP+G G VEGAMVGINSVHVALSSVSAIQDAL+RFLE+SNPLV LMLDEVARILR+Y++LRDSRLND+LEAL PPVS ALAN FGSSSYA+GP +YELRS DLPGARRVL+ AT++M G + + G A G CRAALLQEPFEELVR LA R+A +E A R+KG + FTEWGALLLRKEVRTLQQGLA+LMETDSLN EF D+NELVRLLNFERP+DA++YRPPPAPRRP GG G GD + +S ERVKE+LR+R DFQREAI+AL+L
Sbjct: 1 MALACQYCHRYLDFVADDLGLPEDQSSEFYAQVRLIEGAYVQLEDAYCLRSVEEAMRIAEPIEVQDGTYVSSMVEDASFLVHKSLRRSVSTRSEQAIMAVCNRVTEILDPHAPEPSFFGGLATEADHRVPVGGGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-VEGAMVGINSVHVALSSVSAIQDALNRFLEASNPLVGLMLDEVARILRSYKDLRDSRLNDVLEALSPPVSSALANAFGSSSYALGPAQYELRSGDLPGARRVLHAATRAMTGSDNSGESGGXXXXXXXXADGGCRAALLQEPFEELVRRLASRVAAGVEMAARAKG----------HGXXXXXXXXXXXXXFTEWGALLLRKEVRTLQQGLAALMETDSLNMEFGDLNELVRLLNFERPADALDYRPPPAPRRPRDDGSAGVNGGGGGRIGDGENASVSSERVKEVLRLRADFQREAIDALEL 484
BLAST of mRNA_F-serratus_M_contig130.2236.1 vs. uniprot
Match: W7TYV3_9STRA (Conserved oligomeric Golgi complex subunit 4 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYV3_9STRA) HSP 1 Score: 182 bits (463), Expect = 4.830e-44 Identity = 207/803 (25.78%), Postives = 321/803 (39.98%), Query Frame = 3
Query: 273 VYEEMLQDCRRKAGEATLERLRKLCQRLGRPGAAGEVDELGAEGMAEEETVVVSYHAALLGRAESAANIYGGFLRNRLKQENDAAVKHLSSVRALYRLSLASGXXXXXXXXXXXXXXXXXXXXXXXXXXXADPHPHLTALATVLGEGSKLMARL------AESSLGQGVEEP---------------------VTRLLHEDSKSQAVKVLEWFQHDADLPKWQAQVSGGTTGSGRATTSRASPPSTSGNGRSAVGGDMGRDKGRRGGGASTAAIGTEGSVGTSFDARGVDFVIDEMALACQYCQRYVDFVADDLGLREEPTSGFFMQVRVIEGAYVQLEVAYCLRSVEEAMRIAEPIEVQDGTYVSSMVEDASFLVHKSLRRSVSTRSEQAIMAVCNRITEILDPHAPEPSFYGGLATEADHRVPLGAEVGKDDADLERKRQPDDFSTALAKALDEAENAELRGKEGATVAATRGDDRHGAGAGFGGVEGAMVGINSVHVALSSVSAIQDAL-------------DRFLESSNPLVRLMLDEVARILRAYRELRDSRLNDLLEALYPP-VSKALANVFGSSSYAVGPTEYELRSADLPGARRVLNMATQSMVGDEEGTAGDLKGAGGAAGGCCRAALLQEPFEELVRSLARRIADAIEAAVRSKGGQRTRGGDGGNTASVSRGSAMTGTGFTEWGALLLRKEVRTLQQGLASLMETD-SLNSEFADINELVRLLNFERPSDAVEYR---PPPAPRRPGGSAG--NRGDDRG--------LSPERVKEILRMRVDFQREAINAL 2516
V +EML+DC RK G+ L LRK + AA L + +E AANIYGGFL+ RL + + A++ L SVR+L RL + S D PH+T L+ +LGE S+++ L E Q E + L+ ++ QA+K+L+W+ D + +WQ + +A GTE V + +DF +DE+ L RY+ FVA REE F+QV+ + G YV +E AYC +V +A+ +P EVQ+G VS++VED ++++S+ R+ T S+QAI+AV +R TE+L P + PSF L + R G E G D FS AL + LDE E G+ H E + INS+ A++++ +QD L + +V + E R+L+ Y + L+D + L+ V G ++Y + T YE +A G V V D+ L+ C+A + V +A ++ A+ A+ K FTEWG + LR++VR LQ+ L L++ +L +FA ++++V LLN + P+D V Y P ++P G N +D+ L+P VK+IL+ RV+F A+ +L
Sbjct: 122 VQQEMLEDCERKTGDVVLNLLRKATSAIAPDPAAAPAWFLECVRLKQET---------------KAANIYGGFLQRRLIESTEDALQALDSVRSLRRLQMGSSNSQADDSEGVGQ----------------DSQPHVTGLSRLLGEASRMIGSLRGEGYYCEDESSQDAETGTAGSRHAARFSSWLSGPCLARMVTSLNNIAQQQALKLLKWYSEDCSVREWQERC--------------------------------------------LSARGTEDLV-----VQELDFALDELQLVLGLSNRYLAFVAAP---REE-CMDLFIQVQELAGCYVSMESAYCTFNVAKAIAWGQPTEVQEGVLVSTLVEDVPMILNRSIERATQTLSDQAILAVASRATELLSPDSV-PSFAAALQALVEDRSLTGVEAGGG--------AMDQFSRALQQQLDEEE----------------GNVTH---------EAMIYAINSMDCAVAAMKKMQDMLLELGVRGSCEGESQQRARGGPHMVEAVAQEFGRVLKQYGGYLEVLLDDFASRYVSSGILDYLSQVVGRTNYTIDATTYEKEAAGR-GDPFVTQFLDYMFVKDKV-----LRD--------CKAGMTGSALLGFVERVAMSLSPALIQALEEKE-------------------------FTEWGGMKLRQQVRLLQEQLMELVDGHGTLLPQFARVDQMVTLLNLDSPAD-VHYLMMLKPDIVQQPACGLGEHNSKEDKPKSAEVVGRLTPAEVKQILKQRVEFDPRAVESL 766
BLAST of mRNA_F-serratus_M_contig130.2236.1 vs. uniprot
Match: A0A836CHF9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHF9_9STRA) HSP 1 Score: 164 bits (416), Expect = 2.310e-38 Identity = 222/835 (26.59%), Postives = 307/835 (36.77%), Query Frame = 3
Query: 270 AVYEEMLQDCRRKA----------GEATLERLRKLCQ--RLGRPGAAGEVDELGAEGMAEEETVVVSYHAAL-LGRAESAANIYGGFLRNRLKQENDAAVKHLSSVRALYRLSLASGXXXXXXXXXXXXXXXXXXXXXXXXXXXADPHPHLTALATVLGEGSKLMARLAESSLGQGVEEPVTRL------------------------LHEDSKSQAVKVLEWFQHDADLPKWQAQVSGGTTGSGRATTSRASPPSTSGNGRSAVGGDMGRDKGRRGGGASTAAIGTEGSVGTSFDARGVDFVIDEMALACQYCQRYVDFVADD----------LGLREEPT------------------SGFFMQVRVIEGAYVQLEVAYCLRSVEEAMRIAEPIEVQDGTYVSSMVEDASFLVHKSLRRSVSTRSEQAIMAVCNRITEILDPHAPEPSFYGGLATEADHRVPLGAEVGKDDADLERKRQPDDFSTALAKALDEAENAELRGKEGATVAATRGDDRHGAGAGFGGVEGAMVGINSVHVALSSVSAIQDALDRFLESSNPLVRLMLDEVARIL----------------------RAYRELRDSRLNDLL-EALYPPVSKALAN-VFGSSSYAVGPTEYELRSADLPGARRVLNMATQSMVGDEEGTAGDLKGAGGAAGGCCRAALLQEPFEELVRSLARRIADAIEAAVRSKGGQRTRGGDGGNTASVSRGSAMTGTGFTEWGALLLRKEVRTLQQGLASLMETDSLNSEFADINELVRLLNFERPSDAVEYRPPPAPRRPGGSAGNRGDDRGLSPERVKEILRMRVDFQREAI 2507
+VY EML CR K GEA +E LR+ C+ R +E + + H A+ LGR + AANI+GG+LR+R K D A+K LS+ RALYRLS D HPH+TA+A VLG + +ARL + L LH ++ + A L WF+ DA L +W + + + RS D + +DF+IDE+A ACQ QRY+DF A + R P G +V+ + GAYVQLE AYCL SV +A+RIAEPIEV G +VSS +S H F LA + V EV + DA L + D LR + G R +V NS H A S +A++ A+ L PLV ++++VA RAY +LRD L LL EA YPP+++ L + Y + YE +A GA +AT + DE G G CRA L F L ++ A R+ +EAAV TEWGALLL++EVR LQQ L +L+E +L ++F+ + ++V+LL ERP+DA P + G + L + + +LR+R DF AI
Sbjct: 9 SVYAEMLDACRAKVPPPTAELTTGGEAAVEALRQQCKAAREAMVQXXXXXXXXXXXXXXXDEMLDATCHLAVCLGREKQAANIFGGYLRSRAKGVADRALKRLSAQRALYRLSQVR------------------CIQACTEADAEDAHPHVTAVAAVLGTAAAQLARLRGAGLTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLHGEACAAATSALTWFEADAGLARWLERAQTAVQANMQXXXXXXXXXXXXXXXRSPA----------------------XXXXXPPLDPKTMDFLIDELAFACQLGQRYLDFAAQEGVSCCEGGPNPSARASPPRAARSPRKGGDEEGEGGEGGLLSRVQALVGAYVQLEDAYCLLSVHKALRIAEPIEVTAGVFVSSARPPSS--------------------------------HDRASDFSAALARALEEAV----EVSEADAALPXXXXXXXXXXXXXE-YDRLVAGVLRPR-GXXXXXXXXXXR---------ARDLVVMANSAHFAAHSAAAVRAAIAGRLREGAPLVVALMEQVAAAQVCXXXXXXXXXXXXXXXXXXXQRAYEQLRDEHLACLLREAAYPPLAEVLRRGACARACYDIDADGYE--AAVAAGAPAAAALATAA---DE-----------GPLGAACRAGLDSGVFALLAQAAAARLCADVEAAVLGX---------------------XXXXXVTEWGALLLQREVRVLQQRLGALVEGGTLTAQFSRLQQVVQLLTLERPADA------PLLHKVGAT---------LPTDVARAVLRLRQDFDPAAI 704
BLAST of mRNA_F-serratus_M_contig130.2236.1 vs. uniprot
Match: A0A7S3XW30_HETAK (Conserved oligomeric Golgi complex subunit 4 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XW30_HETAK) HSP 1 Score: 155 bits (392), Expect = 3.800e-37 Identity = 112/333 (33.63%), Postives = 166/333 (49.85%), Query Frame = 3
Query: 1044 DARGVDFVIDEMALACQYCQRYVDFVADDLGLREEPTSGFFMQVRVIEGAYVQLEVAYCLRSVEEAMRIAEPIEVQDGTYVSSMVEDASFLVHKSLRRSVSTRSEQAIMAVCNRITEILDPHAPE------PSFYGGLATEADHRVP--------LGAEVGKDDAD----LERKRQPDDFSTAL-AKALDEAENAELRGKEGATVAATRGDDRHGAGAGFGGVEGAMVGINSVHVALSSVSAIQDALDRFLESSNPLVRLMLDEVARILRAYRELRDSRLNDLLEALYPPVSKALANVFGSSSYAVGPTEYELRSADLPGARRVLNMATQSMV 1985
D +D V DE++ CQ RY+ FV +G E+ + +++ + G ++ +E YC +V A+ ++EPIEVQ G Y S++VEDA FLV KSL R++ST S+QA MAV NR+ E+LDP PSFY L D R A G+ A E P D + AL A A++E E+ LR V+ INS HVA+SS++A++D + +L++ +PLV+ MLD+ RI+ Y+ L D + L A ++ A+A G Y + EYE RS+ G +R+ T + V
Sbjct: 97 DPAQLDVVADELSYLCQLVTRYLSFVCMTIGHDEQ--GELYGKLQQLIGTFISVEDLYCQLNVRRAIELSEPIEVQPGVYCSTLVEDAFFLVKKSLERTLSTCSDQATMAVSNRLAELLDPQQAAAGGEGAPSFYAALRAMGDVRPQEVLAEKRAAAAAQGEGGAGKVPGAEAPPAPPDLAQALLAAAIEEEESKALR------------------------VDSIAFQINSAHVAISSITAMRDMMSEYLDAESPLVQTMLDDFRRIMEPYQALVDGLVGRLAAAAGDALAAAVAAALGGR-YDIEMEEYERRSSSGEGEKRLAAAVTGNAV 402
BLAST of mRNA_F-serratus_M_contig130.2236.1 vs. uniprot
Match: W7TI94_9STRA (Conserved oligomeric Golgi complex subunit 4 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TI94_9STRA) HSP 1 Score: 144 bits (363), Expect = 4.260e-32 Identity = 130/458 (28.38%), Postives = 190/458 (41.48%), Query Frame = 3
Query: 273 VYEEMLQDCRRKAGEATLERLRKLCQRLGRPGAAGEVDELGAEGMAEEETVVVSYHAALLGRAESAANIYGGFLRNRLKQENDAAVKHLSSVRALYRLSLASGXXXXXXXXXXXXXXXXXXXXXXXXXXXADPHPHLTALATVLGEGSKLMARL------AESSLGQGVEEP---------------------VTRLLHEDSKSQAVKVLEWFQHDADLPKWQAQVSGGTTGSGRATTSRASPPSTSGNGRSAVGGDMGRDKGRRGGGASTAAIGTEGSVGTSFDARGVDFVIDEMALACQYCQRYVDFVADDLGLREEPTSGFFMQVRVIEGAYVQLEVAYCLRSVEEAMRIAEPIEVQDGTYVSSMVEDASFLVHKSLRRSVSTRSEQAIMAVCNRITEILDPHAPEPSFYGGLATEADHRVPLGAEVGKDDADLERKRQPDDFSTALAKALDEAE 1565
V +EML+DC RK G+ L LRK + AA L + +E AANIYGGFL+ RL + + A++ L SVR+L RL + S D PH+T L+ +LGE S+++ L E Q E + L+ ++ QA+K+L+W+ D + +WQ + +A GTE V + +DF +DE+ L RY+ FVA REE F+QV+ + G YV +E AYC +V +A+ +P EVQ+G VS++VED ++++S+ R+ T S+QAI+AV +R TE+L P + PSF L + R G E G D FS AL + LDE E
Sbjct: 122 VQQEMLEDCERKTGDVVLNLLRKATSAIAPDPAAAPAWFLECVRLKQET---------------KAANIYGGFLQRRLIESTEDALQALDSVRSLRRLQMGSSNSQADDSEGVGQ----------------DSQPHVTGLSRLLGEASRMIGSLRGEGYYCEDESSQDAETGTAGSRHAARFSSWLSGPCLARMVTSLNNIAQQQALKLLKWYSEDCSVREWQERC--------------------------------------------LSARGTEDLV-----VQELDFALDELQLVLGLSNRYLAFVAAP---REE-CMDLFIQVQELAGCYVSMESAYCTFNVAKAIAWGQPTEVQEGVLVSTLVEDVPMILNRSIERATQTLSDQAILAVASRATELLSPDSV-PSFAAALQALVEDRSLTGVEAGGG--------AMDQFSRALQQQLDEEE 486
BLAST of mRNA_F-serratus_M_contig130.2236.1 vs. uniprot
Match: A0A3F2S274_9STRA (UMP-CMP kinase n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S274_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 2.930e-16 Identity = 118/513 (23.00%), Postives = 215/513 (41.91%), Query Frame = 3
Query: 1056 VDFVIDEMALACQYCQRYVDF---VADDLGLREEPTSGFFMQVRVIEGAYVQLEVAYCLRSVEEAMRIAEPIEVQDGTYVSSMVEDASFLVHKSLRRSVSTRSEQAIMAVCNRITEILD----------PHAP--EPSFYGGLATEADHRVPLGAEVGKDDADLERKRQPDDFSTALAKALDEAENAELRGKEGATVAATRGDDRHGAGAGFGGVEGAMVGINSVHVALSSVSAIQDALDRF----LESSNPLVRLMLDEVARILRAYRELRDSRLNDLLEALYPPVSKALANVFGSS-----SYAVGPTEYELRSADLPGARRVLNMATQSMVGDEEGTAGDLKGAGGAAGGCCRAALLQEPFEELVRSLARRIADAIEAAVRSKGGQRTRGGDGGNTASVSRGSAMTGTGFTEWGALLLRKEVRTLQQGLASLMETDSLNSEFADINELVRLLNFERPSDAVEYRPPPAPRRPGGSAGNRGDDRGLSPERVKEILRMRVDF-QREAINALD 2519
+D +DE+A + Y F V + LG +++ + GF +V+ + G Y+ LE Y +SV +A IAEP E++ G YVSS+VED SF+++K+ R+ S +++ + + L+ P P P T + V + + D + E ++ FS L +A+DE L+ E A + T INS ++ + A+ + ++ F + P++ + + + A+R + N++ E L + K L+ V Y + T+Y+ + +L + Q ++ + E + AL PFE+LV ++ + + +E A+ VSR + GAL L +EV + ++L+ SL + F + ++V +LN +PS ++Y A R + LS E + +LRMRVDF Q++ + A++
Sbjct: 433 MDLFLDELAFIIRVLVSYTAFLTTVCEGLG-QQDGSDGFQTKVQELSGVYLVLERFYVFQSVHKATAIAEPQELEQGVYVSSVVEDVSFVLNKAFFRASQCMSYHTTLSIVIALVDALESQYLPAILALPSRPCVIPLIPTNATTASGSNVARSSSTTRLDTEAEGEQNDVSFSDMLLQAVDEDLERSLQ--EEARLIMT---------------------INSAFMSGEFIHALHEKINEFSRAGFPNDAPILECLPTPIHEMSEAFRSIV---ANEVQEVLSRSLRKRLSLVIQRQMDEQLQYVLTSTQYDAFGSQ---GSPLLQLVEQEVIKNRELHRYER-------------ALCSAPFEDLVEAVTQDLTSCVERALL-----------------VSRKPC------NDLGALQLEREVTDMLARTSTLVPQKSLRAAFTRLFQVVFILNLMQPSHVLDYL-----------ASVREE---LSVETITTLLRMRVDFKQQDVVRAVE 865
BLAST of mRNA_F-serratus_M_contig130.2236.1 vs. uniprot
Match: H3GYG8_PHYRM (Conserved oligomeric Golgi complex subunit 4 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GYG8_PHYRM) HSP 1 Score: 93.2 bits (230), Expect = 1.140e-15 Identity = 126/528 (23.86%), Postives = 215/528 (40.72%), Query Frame = 3
Query: 1056 VDFVIDEMALACQYCQRYVDF---VADDLGLREEPTSGFFMQVRVIEGAYVQLEVAYCLRSVEEAMRIAEPIEVQDGTYVSSMVEDASFLVHKSLRRSVSTRSEQAIMAVCNRITEILD-----------------PHAPEPSFYGGLATEADHRVPLGAEVGKDDADLERKRQPDDFSTALAKALDEAENAELRGKEGATVAATRGDDRHGAGAGFGGVEGAMVGINSVHVALSSVSAIQDALDRFLESSNPLVRLMLDEVARILRAYRELRDSRLNDLLEALYPPVSKALANVFGSS-----------------SYAVGPTEYELRSADLPGARR--VLNMATQSMVGDEEGTAGDLKGAGGAAGGCCRAALLQEPFEELVRSLARRIADAIEAAVRSKGGQRTRGGDGGNTASVSRGSAMTGTGFTEWGALLLRKEVRTLQQGLASLMETDSLNSEFADINELVRLLNFERPSDAVEYRPPPAPRRPGGSAGNRGDDRGLSPERVKEILRMRVDFQ-REAINALD 2519
+D +DE+A + Y F V + LG +++ +GF +V+ + G Y+ LE Y +SV +A IAEP E++ G YVSS+VED SF+++K+ R+ + +++ + + L+ P +P + G + D V L D D E + FS L +A+DE + E +E A + T INS +++ V A+QD +D + + P A IL E + +ND+ EA + VS + V S Y + EY D G+R +L + Q ++ + E + AL PFE+LV ++ + + +E A+ + + GAL L +EV + +++L+ SL + F + ++V +LN +PS ++Y A R + LS E + +LRMRVDF+ ++ A+D
Sbjct: 226 MDLFLDELAFIIRVLVSYTAFLTTVCEGLG-QQDGNAGFQTKVQELSGVYLVLERFYVFQSVHKATAIAEPQELEHGVYVSSVVEDVSFVLNKAFFRASQCMNYHTALSIVIALVDALESQYLPAILALPSRPCVIPLSPSDAASAGANGKNDGSVGL-------DEDAEGGQTEVSFSDMLLQAVDE--DLERTLQEEARLIMT---------------------INSAYMSGEFVRALQDKIDEYSRAGFP-------SDASIL----ECLPTPINDMTEAFHSIVSNEVQEVLSRSLRKRLLQVIQLQMDEQLRYVLTSAEY-----DAFGSRGSPLLRLVEQEVMKNRELQRYER-------------ALCSTPFEDLVEAVTQDLTLCLERAL-----------------------LTSKKSCNDLGALQLEREVTDILARVSTLVPQKSLRAAFTRLFQVVFMLNLMQPSHVLDYL-----------ASVREE---LSLETIATLLRMRVDFKPQDVARAID 656
BLAST of mRNA_F-serratus_M_contig130.2236.1 vs. uniprot
Match: A0A0P1B6S4_PLAHL (Conserved oligomeric Golgi complex subunit 4 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B6S4_PLAHL) HSP 1 Score: 92.0 bits (227), Expect = 2.540e-15 Identity = 109/460 (23.70%), Postives = 197/460 (42.83%), Query Frame = 3
Query: 1056 VDFVIDEMALACQYCQRYVDF---VADDLGLREEPTSGFFMQVRVIEGAYVQLEVAYCLRSVEEAMRIAEPIEVQDGTYVSSMVEDASFLVHKSLRRSVSTRSEQAIMAVCNRITEILDPHAPEPSFYGGLATEADHR--VPL------GAEVGKDD--ADLERKRQPDDFSTALAKALDEAENAELRGKEGATVAATRGDDRHGAGAGFGGVEGAMVGINSVHVALSSVSAIQDALDRF----LESSNPLVRLMLDEVARILRAYRELRDSRLNDLLEALYPPVSKALANVFGSSSYAVGPT-EYELRSADLPGARRVLNMATQSMVGDEEGTAGDLKGAGGAAGGCCRAALLQEPFEELVRSLARRIADAIEAAVRSKGGQRTRGGDGGNTASVSRGSAMTGTGFTEWGALLLRKEVRTLQQGLASLMETDSLNSEFADINELVRLLNFERPSDAVEY 2381
+D ++DE+A + Y F V + LG +++ GF +V + G YV LE Y +SV +A IAEP E++ G YVSS+VED SF+++K+ R+ + +++ + + L E + + T +PL A++ + D +D + FS L + +DE L+ + RH ++ INS +++ VSA+Q+ +D F + P++ + + I A+R + N++ E L + K L V +Y + +Y L SA A + +V E T +L+ L + PFE+LV + + + +E+A+ + R R F + GAL L +E+ + ++SL+ SL F + +++ +LN +PS ++Y
Sbjct: 231 IDLILDELASIIRVLVSYTAFLITVCEGLG-QQDRNEGFEAKVHELSGVYVMLERFYVFQSVHKATVIAEPQELEHGVYVSSVVEDVSFVLNKAFFRASQCLNYHTALSIVIVLVDAL-----ESQYLQAVLTLPSRPCVIPLFPMKAATAQISRQDNSSDAQNHHSEISFSDILLRVVDEDLERTLQEEA-----------RH------------IMTINSAYMSGEFVSALQEKIDEFSSAIFATDAPILECLPTPIQNITDAFRSIVS---NEIQEVLARTLHKRLPQVL---NYEMDEQLQYVLTSAQYD-ALELQGSLLVRLVEREVSTNSELQR--------YERVLCRAPFEDLVEAATQYLTSCLESALFTS---RKR--------------------FNDLGALQLEREITDILTRISSLVPHRSLRRAFTRLFQVIFVLNLVQPSHVLDY 623
BLAST of mRNA_F-serratus_M_contig130.2236.1 vs. uniprot
Match: A0A6A3UDT7_9STRA (Conserved oligomeric Golgi complex subunit 4 n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UDT7_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 2.620e-15 Identity = 121/514 (23.54%), Postives = 211/514 (41.05%), Query Frame = 3
Query: 1056 VDFVIDEMALACQYCQRYVDFVA---DDLGLREEPTSGFFMQVRVIEGAYVQLEVAYCLRSVEEAMRIAEPIEVQDGTYVSSMVEDASFLVHKSLRRSVSTRSEQAIMAVCNRITEILDP-HAPEPSFYGGLATEADHRVPLGAEVGKDDADLERKRQPD--------DFSTALAKALDEAENAELRGKEGATVAATRGDDRHGAGAGFGGVEGAMVGINSVHVALSSVSAIQDALDRF----LESSNPLVRLMLDEVARILRAYRELRDSRLND---------LLEALYPPVSKALANVFGSSSYAVGPTEYELRSADLPGARRVLNMATQSMVGDEEGTAGDLKGAGGAAGGCCRAALLQEPFEELVRSLARRIADAIEAAVRSKGGQRTRGGDGGNTASVSRGSAMTGTGFTEWGALLLRKEVRTLQQGLASLMETDSLNSEFADINELVRLLNFERPSDAVEYRPPPAPRRPGGSAGNRGDDRGLSPERVKEILRMRVDFQREAI-NALD 2519
+D +DE+A + Y F+A D LG + E +GF ++V+ + G YV LE Y +SV +A IAEP E+++G YVSS+VED SF+++K+ R+ + +++ + + L+ + P E V A G D R FS L +A+D+ L+ E A + T INS ++ V A+Q+ +D + S P++ + + + A+ + + + + LLE + + + L V S+ Y V L S P +L + Q ++ + E + AL PFE+LV ++ + + +E A+ T + GAL L +EV + +++L+ SL + F + ++V +LN +PS ++Y A R + LS E + +LRMRVDF+ + + A+D
Sbjct: 231 IDLFLDELAFIIRVLVSYTAFLATVCDGLG-QGEGGAGFQVKVQELTGVYVVLERFYVFQSVHKATAIAEPQELEEGVYVSSVVEDVSFVLNKAFFRASQCMNYHTALSIVIALVDALESQYLPAILALPSRPCEIPLSVANAASAGSSGNDNGSARLDGXXXXXNEVSFSDMLLQAVDDDLQRTLQ--EEARLIMT---------------------INSAFMSGEFVRALQEKIDDYSRAGFPSDAPILECLPTPIHDMTEAFHSIVSNEVQEVLSRSLRKRLLEVIQRQMEEQLKYVLTSAEYDV------LGSQGSP----LLRLVEQEVLKNRELQRYER-------------ALCSTPFEDLVEAVTQDLTSGVERAL-----------------------LATRKHCNDLGALQLEREVTDMLARVSTLVPQKSLRAAFTRLFQVVFILNLMQPSHVLDYL-----------ASVREE---LSLETIATLLRMRVDFKSQDVARAID 660 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig130.2236.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig130.2236.1 >prot_F-serratus_M_contig130.2236.1 ID=prot_F-serratus_M_contig130.2236.1|Name=mRNA_F-serratus_M_contig130.2236.1|organism=Fucus serratus male|type=polypeptide|length=822bp MMPTMKNHSGGAAVVMFEERFEQFYLQLSEGKTGGMVACVDEMQRIIDSIback to top mRNA from alignment at F-serratus_M_contig130:193518..211216+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig130.2236.1 ID=mRNA_F-serratus_M_contig130.2236.1|Name=mRNA_F-serratus_M_contig130.2236.1|organism=Fucus serratus male|type=mRNA|length=17699bp|location=Sequence derived from alignment at F-serratus_M_contig130:193518..211216+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig130:193518..211216+ >mRNA_F-serratus_M_contig130.2236.1 ID=mRNA_F-serratus_M_contig130.2236.1|Name=mRNA_F-serratus_M_contig130.2236.1|organism=Fucus serratus male|type=CDS|length=4932bp|location=Sequence derived from alignment at F-serratus_M_contig130:193518..211216+ (Fucus serratus male)back to top |