mRNA_F-serratus_M_contig1275.2036.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1275.2036.1
Unique NamemRNA_F-serratus_M_contig1275.2036.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1275.2036.1 vs. uniprot
Match: D7FXY8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXY8_ECTSI)

HSP 1 Score: 652 bits (1683), Expect = 1.590e-228
Identity = 359/506 (70.95%), Postives = 405/506 (80.04%), Query Frame = 3
Query:    3 KINKARRKWQKQSEFLCNIKFRNNLPDPPLGPHFLEVPLDLDKYANFAPTTMDTSYKWKLHYERDLGVPIDIIDPRNYILPKNPVPLPKEDEALLNWGEGDVPTSSAGRREALSTSARRRAVDTSVTWLKRTVYLTNDPFDPVHQFKSEQQAQADKRAELEKEIARGGQQDRKMLIEESFMHANSRKPLVHSDVKKRHLTAEWVMPVMPDLSLWPNTYTTVAFDKDPAEDDTVKGTEARKRKRTNEALVCNVKRTTFEGSSHEVITGSYLLPKDKKHKGDEGDDXXXXXXXXXXXXXXXXXXXLGYAFAKDYKFNIIHYAQNQFDGNPHLLFMTNPETGQATYCKLSAKVELANLPREQGQPVTGRGARVSRRALSEDEITNARKKVSADLQLEGDYDYLPGLV-VTESDFAGEKEQGNEEAPGLEDDDDEEDLRENGHAGGADYDNQEDNNGSRAWNGGASDAERESLLSMTMESEASNVAVKGTESSEADIIGVNTDDN-DSEP 1514
            KINKARRKWQKQ+EFLC IKFRN+LPDPPLGPHFL+VPLDL  Y  + PTT+++ YKWKLHYERDLGVPID+IDPRNY+LPK  VPLP EDEALLNW EGD P S   ++E LSTSARR+ VDTSVTWLK+TVYLTNDPFDPVHQFKSEQQ QADK  ELEKEIARG +QDRKMLIEESF+HANS KPLVH D  KRHLTAEWVMPVMPD+SLWPNTYTTV FDKDPA D+TVKG+EARKRKR  EALVCNVKRTTFEG+SHEVITGSYL+PK K  K  EG  XXXXXXXXXXX        +GY F KDYKFNI+HYAQ Q+DGNPHLLF+ N +T +A++CKLSAKVELANLPR QGQP TGRGA VS+R+LS +E++NARKKVSADLQLEG+Y Y+ G   ++    A   + G                 ENGHA  ++      ++ SRAWNG  SD +RES+LSMTMESEASNVAVKGTESSE DI G +TDD+ DSEP
Sbjct:   10 KINKARRKWQKQTEFLCTIKFRNSLPDPPLGPHFLDVPLDLQSYVKYKPTTLESDYKWKLHYERDLGVPIDVIDPRNYLLPKKAVPLPPEDEALLNWREGDGPGSV--KKEDLSTSARRKTVDTSVTWLKKTVYLTNDPFDPVHQFKSEQQTQADKEVELEKEIARGKKQDRKMLIEESFLHANSNKPLVHQDASKRHLTAEWVMPVMPDVSLWPNTYTTVMFDKDPAADETVKGSEARKRKRAGEALVCNVKRTTFEGNSHEVITGSYLMPKGKATKKGEG--XXXXXXXXXXXKMDVEDGSVGYDFVKDYKFNIVHYAQTQYDGNPHLLFVINKDTQEASFCKLSAKVELANLPRGQGQPATGRGAVVSKRSLSPEEVSNARKKVSADLQLEGEY-YIAGEDGLSNGGHAAGGDTGXXXXXXXXXXXXXXXXXENGHANRSEAGLNGHSDESRAWNG-TSDVDRESVLSMTMESEASNVAVKGTESSEGDIAGAHTDDDEDSEP 509          
BLAST of mRNA_F-serratus_M_contig1275.2036.1 vs. uniprot
Match: A0A835YRH5_9STRA (Paf1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRH5_9STRA)

HSP 1 Score: 332 bits (852), Expect = 1.460e-102
Identity = 184/399 (46.12%), Postives = 251/399 (62.91%), Query Frame = 3
Query:    3 KINKARRKWQKQSEFLCNIKFRNNLPDPPLGPHFLEVPLDLDKYANFAPTTMDTSYKWKLHYERDLGVPIDIIDPRNYILPKNPVPLPKEDEALLNWGEGDVPTSSAGRREALSTSARRRAVDTSVTWLKRTVYLTNDPFDPVHQFKSEQQAQADKRAELEKEIARGGQQDRKMLIEESFMHANSRKPLVHSDVKKRHLTAEWVMPVMPDLSLWPNTYTTVAFDKDPAEDD-TVKGTEARKRKRTNEALVCNVKRTTFEGSSHEVITGSYLLPKDKKHKGDEGDDXXXXXXXXXXXXXXXXXXXLGYAFAKDYKFNIIHYAQNQFDGNP-------HLLFMTNPETGQATYCKLSAKVELANLPREQGQPVTGRGARVSRRALSEDEITNARKKVSADL 1175
            KI  ARRKWQK SEFLC++KFRNNLPDPPLGPHFL++PL +DK   + PTT++T +KWKLH  RDLGV IDIID R+Y +P  P  L  +D  LL W + +    +A   E  S   +R+ VDTSVTWLK+TVYLTNDPFD VH+F+S++Q Q D +  ++K++    + DR   + +SF  ANS+K LVH+  K   LT EWVMPV+PD +LW NTYT V FD DP E++  + G   RKR+R ++A+V NV++   +    E +TGSY++PK+    G           X   XX        G+A+ KDY+ N+ +Y   Q D          HL+F+ +  + +AT+C+LSA+V+LANLP E  Q   G G  V+RR  S++E     +KV+ DL
Sbjct:   94 KIQTARRKWQKDSEFLCHLKFRNNLPDPPLGPHFLKIPLSMDKLVQYTPTTLETQHKWKLHCNRDLGVDIDIIDSRSYSVPDKPPTLHPKDAELLQWDKVERGNGAAEAEEGFSRRMQRKQVDTSVTWLKKTVYLTNDPFDAVHKFRSDRQVQMDAKERMQKDMEESRKTDRVSAVLQSFAEANSKKKLVHATNKS--LTPEWVMPVLPDAALWGNTYTHVVFDIDPIEEEHLIAGPRQRKRQRADKAIVGNVRKLR-KSDGDEFVTGSYMVPKEAGEGG---------GGXSAEXXEKGAEGGTGFAWVKDYQMNVQNYPAGQGDSGSGSSGAMAHLVFIIDQASSKATFCQLSARVDLANLPAED-QANRGPGMEVARRPPSDEEFQAMGEKVAKDL 479          
BLAST of mRNA_F-serratus_M_contig1275.2036.1 vs. uniprot
Match: F0W354_9STRA (RNA polymerase IIassociated factor 1 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W354_9STRA)

HSP 1 Score: 169 bits (429), Expect = 4.660e-42
Identity = 123/374 (32.89%), Postives = 189/374 (50.53%), Query Frame = 3
Query:    9 NKARRKWQKQSEFLCNIKFRNNLPDPPLGPHFLEVPLDLDKYANFAPTTMDTSYKWKLHYERDLGVPIDIIDPRNYILPKNPVPLPKEDEALLNWGEGDVPTSSAGRREALSTSARRRAVDTSVTWLKRTVYLTNDPFDPVHQFKSEQQAQADKRAELEKEIARGGQQDRKMLIEESFMHANSRKPLVHSDVKKRHLTAEWVMPVMPDLSLWPNTYTTVAFDKDPAEDDTVKGTEARKRKRTNEALVCNVKRTTFEGSSHEVITGSYLLPKDKKHKGDEGDDXXXXXXXXXXXXXXXXXXXLGYAFAKDYKFNIIHYAQNQFDGNPHLLFMTNPETGQATYCKLSAKVELANLPREQGQPVTGRGARVSRRALS 1130
            +K R    KQSEFL N++FRN LPD P    FL+ P + D+   + P T++  Y +++H E +LG+ ID+IDP  Y +P    PL   DEA+L   E           ++  T ++ R V   V+WL+RT Y+ ND ++PVH+FKSE + Q++ R   E  +A   Q   K   E+SF   N  + LVH    K++L    +  V PD SL+PN Y  +++D  P+ DD  K    R+ +    AL+C V R + EGS H  I GS LLP   + +  + +                      Y + ++Y  ++        + + + LFM +PE+ + TYC+L  +++L    +  G+    RGA V RR  S
Sbjct:  109 SKRRSLLGKQSEFLANLEFRNKLPDIPFDTKFLQYPHESDRLIKWKPNTLEQDYVFEIHEEPNLGLSIDLIDPAKYEVPTVTEPLEAGDEAVLMMKE----------TQSKDTKSKARPV---VSWLRRTEYMGNDLYEPVHKFKSEVEFQSELREGTENALAEEVQVTLKQRAEDSFKDVNDPEVLVHPF--KKNLKPAKIWDVYPDQSLYPNKYAHLSYDVLPSMDDKGKSIPQRESR----ALLCGVSRKS-EGSDH--IQGSILLPVSAQAENPDAEVGEK------------------YGYFREYLLSVQQLDNKGKEDSQNRLFMLDPESQEFTYCELLHRIQLKKT-KFTGEDQRRRGAIVHRREYS 441          
BLAST of mRNA_F-serratus_M_contig1275.2036.1 vs. uniprot
Match: A0A024FZ64_9STRA (Uncharacterized protein n=8 Tax=Albugo candida TaxID=65357 RepID=A0A024FZ64_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.090e-33
Identity = 122/397 (30.73%), Postives = 184/397 (46.35%), Query Frame = 3
Query:    9 NKARRKWQKQSEFLCNIKFRNNLPDPPLGPHFLEVPLDLDKYANFAPTTMDTSYKWKLHYERDLGVPIDIIDPRNY--------------------ILPKNPVPLPKEDEALLNWGEGDVPTSSAGRREALSTSARRRAVDTSVTWLKRTVYLTNDPFDPVHQFKSEQQAQADKRAELEKEIARGGQQDRKMLIEESFMHANSRKPLVHSDVKKRHLTAEWVMPVMPDLSLWPNTYTTVAFDKDPAEDDTVKGTEARKRKRTNEALVCNVKRTTFEGSSHEVITGSYLLPKDKKHKGDEGDDXXXXXXXXXXXXXXXXXXXLGYAFAKDYKFNIIHYAQNQFDGNPHLLFMTNPETGQATYCKLSAKVELANLPREQGQPVTGRGARVSRRALSEDE 1139
            +K R    KQSEFL N++FRN LPD P    FL+ P + D+   + P T++  Y +++H E +LG+ ID+IDP  Y                     +P    PL   DEA+L   E           ++  T  + R V   V+WL+RT Y+ ND ++PVH+FKSE + Q++ R   E  +A   Q   +   E+SF   N    +VH    K++L A  V  V PD SL+PN Y  +++D  P+ DD  K    R+ +    AL+C V R   EGS H  I GS LLP   + +  + +                    L      + +  +I Y +  +   P      +PE+ + TYC+L  +++L    +  G+     GA V RR  S+ E
Sbjct:  109 SKRRSLLGKQSEFLANLEFRNKLPDLPFDTKFLQYPHESDRLIKWKPNTLEQDYVFEIHEEPNLGLSIDLIDPAKYEGRSLDGHLYGRVLMFCVIDTVPTKAEPLEAGDEAVLMMKE----------TQSKDTKYKARPV---VSWLRRTEYMGNDLYEPVHKFKSEVEFQSELREGTENALAEEVQVTLEQRAEDSFKDINDPSLIVHPF--KKNLKAAKVWDVYPDQSLYPNKYAHLSYDVLPSTDDKGKSIPQRESR----ALLCGVSRKN-EGSDH--IQGSILLPVSAQAENPDAE--------VGEKYGYFREYLLSVQQLDNVRQELILYLRLLYSRRPE-----HPESQEFTYCELLHRIQLKKT-KISGEDQRRHGAIVHRREYSKAE 469          
BLAST of mRNA_F-serratus_M_contig1275.2036.1 vs. uniprot
Match: A0A7S2D5H7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D5H7_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.570e-31
Identity = 94/286 (32.87%), Postives = 141/286 (49.30%), Query Frame = 3
Query:   15 ARRKWQ-KQSEFLCNIKFRNNLPDPPLGPHFLEVPLDLDKYANFAPTTMDTSYKWKLHYERDLGVPIDIIDPRNYI-LPKNPVP-LPKEDEALLNWGEGDVPTSSAGRREALSTSARRRAVDTSVTWLKRTVYLTNDPFDPVHQFKSEQQAQADKRAELEKEIARGGQQDRKMLIEESFMHANSRKP-------LVHSDVKKRHLTAEWVMPVMPDLSLWPNTYTTVAFDKDPAEDDTVKGTEARKRKRTNEALVCNVKRTTFEGSSHEVITGSYLLPKDKKHKGD 842
            ARR+++ K   F+CN+  RN LP+P  GP   ++P DL  +  F PT++DT YKWK H ER LGV +D++D   +   PK   P L  +D+ +LNW          G++      A+         WL  T + +ND    VH+FKS  Q        +++E  R  Q +  +  +   +  N+ K        LV +  +++ LTAEWVMPV+PD  LW N +  V F+ DPA  +       RKR R    ++ N K    E     V  GS++LP ++   G+
Sbjct:   37 ARRRFRSKIPHFVCNMPLRNRLPEPLPGPKLAQLPTDLQSFVEFNPTSLDTDYKWKHHCERTLGVSVDLVDLEAHRPQPKEKRPQLHPDDDRILNW---------RGKQGGGGGRAKEHV------WLLNTSFTSNDLTQQVHKFKSGSQV-------MKEEHERIVQINNALGTDAETLTENAEKSFDVPFDKLVEAAARRKGLTAEWVMPVLPDARLWANDFVHVDFEVDPAPSN------PRKRARVAGGMLVNAKPVYNEKQQTNVTKGSFILPMEEGSAGE 294          
BLAST of mRNA_F-serratus_M_contig1275.2036.1 vs. uniprot
Match: A0A7S3YBK4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YBK4_HETAK)

HSP 1 Score: 127 bits (320), Expect = 2.340e-30
Identity = 55/100 (55.00%), Postives = 73/100 (73.00%), Query Frame = 3
Query:    3 KINKARRKWQKQSEFLCNIKFRNNLPDPPLGPHFLEVPLDLDKYANFAPTTMDTSYKWKLHYERDLGVPIDIIDPRNYILPKN-PVPLPKEDEALLNWGE 299
            KI KAR+KWQK +EFLC +KFRN LP+P LGP+ L++P  +D+   + P ++D +YKW+LH ERDLGVPID+IDP  Y++P   P P+   D ALL W E
Sbjct:   83 KIQKARKKWQKNTEFLCTLKFRNTLPEPHLGPNLLDIPFPIDELTEYRPNSLDVNYKWQLHCERDLGVPIDLIDPARYLVPPGTPPPMDPADRALLEWRE 182          
BLAST of mRNA_F-serratus_M_contig1275.2036.1 vs. uniprot
Match: A0A7S3YEK7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEK7_HETAK)

HSP 1 Score: 119 bits (297), Expect = 1.540e-26
Identity = 81/239 (33.89%), Postives = 126/239 (52.72%), Query Frame = 3
Query:  354 RRRAVDTSVTWLKRTVYLTNDPFD-PVHQFKSEQQAQADKRAELEKEIARGGQQDRKMLIEESFMHANSRKPLVHSDVKKRHLTAEWVMPVMPDLSLWPNTYTTVAFDKDPA-EDDTVKGTE--ARKRKRTNEALVCNVKRTTFEGSSHEVITGSYLLPKDKKHKGDEGDDXXXXXXXXXXXXXXXXXXXLGYAFAKDYKFNIIHYAQNQFDGNPHLLFMTNPETGQATYCKLSAKVEL 1058
            +R++VDT+VTW+KRT YL+ND +  PVH FKS+  A A++ A L++E+     Q     IE +F HA ++            L AEW +PV+PD+ LW N +  V FD DP  +DD  K  E  A K++R  +A++ +V+     G+S  V+  SYL+PK  +    EG +                   L +   + Y+ ++    +N F      +F+ + E GQATYC+L  +V+L
Sbjct:    8 KRKSVDTNVTWMKRTTYLSNDLYGAPVHAFKSQAAAVAEQNAGLDQEMVEVNLQSAATKIEATF-HAAAKDLAALRHPTNPGLRAEWALPVLPDVGLWANVFMHVGFDLDPVTQDDPNKDPEHIAEKKQRFEKAIISDVRENEGGGTSKPVMVASYLVPKAGQTGAGEGGE-------------------LAFEHLRGYQIDV-RDTENTF------VFLVDAEGGQATYCRLDTRVDL 219          
BLAST of mRNA_F-serratus_M_contig1275.2036.1 vs. uniprot
Match: A0A152A5K3_9MYCE (RNA polymerase II-associated factor 1 n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A5K3_9MYCE)

HSP 1 Score: 117 bits (293), Expect = 2.940e-24
Identity = 76/220 (34.55%), Postives = 113/220 (51.36%), Query Frame = 3
Query:   39 SEFLCNIKFRNNLPDPPLGPHFLEVPLDLDKYANFAPTTMDTSYKWKLHYERDLGVPIDIIDPRNYILPKNPVPLPKEDEALLNWGEGDVPTSSAGRREALSTSARRRAVDTSVTWLKRTVYLT---NDPFDPVHQFKSEQQAQADKRAELEKEIARGGQQDRKMLIEESFMHANSRKPLVHSDVKKRHLTAEWVMPVMPDLSLWPNTYTTVAFDKDPAE 689
            S+F C +KF N+LP  P  P  L +P D  K+ N+  T+M+ SYK+ +  E  LG+PI++IDP  Y  PK+ +P+P ED+ LL        + S    E  S  + ++ V  SVTWL++T YL+    +            Q  +++ A +EK      Q+    +IE +F +A   +  VH       L    ++PV PD  LW N YT V+FD DP E
Sbjct:   94 SDFNCKLKFENSLPPIPFEPKLLLIPTDFSKFINYRTTSMEKSYKYPMLTEPHLGIPIELIDPTLYYTPKSKLPIPTEDQTLLR-------SLSVQEEEEKSLKSVKKPVRPSVTWLRKTEYLSVTEENQLGKKPNTSMRPQGASNQLALIEKPY----QEAPGEIIENTF-YAIKDENFVHPT--NPSLKPVKILPVFPDFDLWANQYTEVSFDADPFE 299          
BLAST of mRNA_F-serratus_M_contig1275.2036.1 vs. uniprot
Match: A0A061RU81_9CHLO (RNA polymerase II-associated factor 1 n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RU81_9CHLO)

HSP 1 Score: 112 bits (280), Expect = 8.480e-23
Identity = 85/287 (29.62%), Postives = 126/287 (43.90%), Query Frame = 3
Query:   33 KQSEFLCNIKFRNNLPDPPLGPHFLEVPLDLDKYANFAPTTMDTSYKWKLHYERDLGVPIDIIDPRNYILPKN-PVPLPKEDEALLNWGEGDVPTSSAGRREA-----LSTSARRRAVDTSVTWLKRTVYLTNDPFDPVHQFKSEQQAQADKRAELEKEIARGGQ---------QDRKMLIEESFMHANSRKPLVHSDVKKRHLTAEWVMPVMPDLSLWPNTYTTVAFDKDPAEDDTVKGTEARKRKRTNEALVCNVKRTTFEGSSHEVITGSYLLPKDKKHKGDEG 848
            +++ F+CNI+FRNNLPD P  P  L      D+ + F  T ++ + KW +H+E D G+P+ ++D + + +P   P  L  +DEALL   + D P    G R       L       ++D  + WL  T Y++ND      + K +             +  RGG           D+  LIEESF  A    P    +   R +    V+PV+PD   W N Y  V FD DP ED          R   N+  V + +      S+ E     Y++PKD     D+G
Sbjct:   68 RETPFICNIRFRNNLPDVPADPRLLVSGAGSDQLSAFCLTDLERNPKWDIHFEPDAGIPVSLLDSQXFAVPAGAPKALDPKDEALLQ-DQRDGPDPGRGTRMTGPSAFLKAKVSDSSLDKGLPWLMCTTYISNDSLTTPSRRKEKP------------DQTRGGSPSVTAPQTIDDQIKLIEESFRKAQQDVPRHPRNPSLRPVE---VLPVLPDFRYWMNNYLLVNFDNDPTEDH-----PRLSRLHPNQRKVLSERAVFKTFSTGEQNFFGYMVPKDLPKVEDDG 333          
BLAST of mRNA_F-serratus_M_contig1275.2036.1 vs. uniprot
Match: A0A6P7TL15_OCTVU (RNA polymerase II-associated factor 1 homolog n=2 Tax=Octopus TaxID=6643 RepID=A0A6P7TL15_OCTVU)

HSP 1 Score: 111 bits (278), Expect = 4.200e-22
Identity = 84/285 (29.47%), Postives = 143/285 (50.18%), Query Frame = 3
Query:   12 KARRKWQKQSEFLCNIKFRNNLPDPPLGPHFLEVPLDLDKYANFAPTTMDTSYKWKLHYERDLGVPIDIIDPRNYILPKNPVPLPKEDEALLNWGEGDVPTSSAGRREALSTSARRRAVDTSVTWLKRTVYLTNDPFDPVHQFKSEQQAQADKRAELEKEIARGGQQDRKM-LIEESFMHANSRKPLVHSDVKKRHLTAEWVMPVMPDLSLWPNTYTTVAFDKDPAEDDTVKGTEARKRKRTNEALVCNVKRTTFEGSSHEVITGSYLLPKDK---KHKGDEGDD 854
            K R   +K+SE +C +K+ N LPD P  P F+  P + +++  + PT+++ +YK+ +  E DLGV ID+I+P  Y L  N +    EDE LL   E ++ T        L  S R R  +TSV+WL++T Y++ +    + +    +     K  ++ KE      +D ++  IE++F +A   K  +     K  +T   ++PV PD  LW + +  V FD DPA        +A +    ++A++    R   + S  + +  +Y LP ++   K K D+ DD
Sbjct:   16 KNRNVVEKRSELVCRVKYNNTLPDIPFDPKFITYPFESNRFIQYKPTSLERTYKYDMLTEHDLGVTIDLINPETYKLSPN-IYADSEDERLL---EEEINT--------LHDSRRSRHHNTSVSWLRKTEYISTEYNRFIQKSDKHETKVGFKLKQIMKEEDLYKDRDSQIKAIEKTFENA---KTNIAKHYSKPGVTPVEILPVFPDFDLWKHPFAQVIFDSDPAPKARTPSVQAEEM---SQAMI----RGAVDESGEQFV--AYFLPTEETCNKRKQDQTDD 276          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1275.2036.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXY8_ECTSI1.590e-22870.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YRH5_9STRA1.460e-10246.12Paf1-domain-containing protein n=1 Tax=Tribonema m... [more]
F0W354_9STRA4.660e-4232.89RNA polymerase IIassociated factor 1 putative n=1 ... [more]
A0A024FZ64_9STRA1.090e-3330.73Uncharacterized protein n=8 Tax=Albugo candida Tax... [more]
A0A7S2D5H7_9STRA1.570e-3132.87Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3YBK4_HETAK2.340e-3055.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3YEK7_HETAK1.540e-2633.89Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A152A5K3_9MYCE2.940e-2434.55RNA polymerase II-associated factor 1 n=1 Tax=Tieg... [more]
A0A061RU81_9CHLO8.480e-2329.62RNA polymerase II-associated factor 1 n=2 Tax=Tetr... [more]
A0A6P7TL15_OCTVU4.200e-2229.47RNA polymerase II-associated factor 1 homolog n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1275contigF-serratus_M_contig1275:99197..111094 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score566.2
Seed ortholog evalue1.3e-158
Seed eggNOG ortholog2880.D7FXY8
Preferred namePAF1
KEGG rclassRC00080,RC00216,RC00242,RC00255
KEGG koko:K00294,ko:K11673,ko:K15174
KEGG ReactionR00245,R00707,R00708,R04444,R04445,R05051
KEGG Pathwayko00250,ko00330,ko01100,ko04011,map00250,map00330,map01100,map04011
Hectar predicted targeting categoryother localisation
GOsGO:0000018,GO:0000082,GO:0000083,GO:0000122,GO:0000183,GO:0000278,GO:0000414,GO:0000416,GO:0000428,GO:0000785,GO:0000981,GO:0000983,GO:0000988,GO:0000989,GO:0000993,GO:0001015,GO:0001076,GO:0001098,GO:0001099,GO:0001704,GO:0001706,GO:0001711,GO:0001932,GO:0001934,GO:0002237,GO:0002682,GO:0002683,GO:0003674,GO:0003682,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006289,GO:0006323,GO:0006325,GO:0006333,GO:0006342,GO:0006351,GO:0006353,GO:0006354,GO:0006355,GO:0006356,GO:0006357,GO:0006360,GO:0006362,GO:0006364,GO:0006366,GO:0006368,GO:0006378,GO:0006396,GO:0006397,GO:0006464,GO:0006479,GO:0006513,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007275,GO:0007369,GO:0007492,GO:0007507,GO:0008023,GO:0008104,GO:0008150,GO:0008152,GO:0008213,GO:0009058,GO:0009059,GO:0009302,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009790,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009909,GO:0009910,GO:0009987,GO:0010033,GO:0010390,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016074,GO:0016458,GO:0016567,GO:0016569,GO:0016570,GO:0016571,GO:0016574,GO:0016584,GO:0016591,GO:0016593,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019827,GO:0019899,GO:0022402,GO:0022607,GO:0022613,GO:0030054,GO:0030154,GO:0030880,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031123,GO:0031124,GO:0031126,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031396,GO:0031399,GO:0031401,GO:0031440,GO:0031442,GO:0031497,GO:0031935,GO:0031938,GO:0031974,GO:0031981,GO:0032259,GO:0032268,GO:0032270,GO:0032446,GO:0032496,GO:0032501,GO:0032502,GO:0032774,GO:0032784,GO:0032786,GO:0032968,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033182,GO:0033365,GO:0033523,GO:0033554,GO:0033993,GO:0034243,GO:0034470,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0034728,GO:0035327,GO:0035987,GO:0036211,GO:0040029,GO:0042221,GO:0042254,GO:0042325,GO:0042327,GO:0043144,GO:0043170,GO:0043175,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0043628,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044770,GO:0044772,GO:0044843,GO:0044877,GO:0045165,GO:0045309,GO:0045595,GO:0045596,GO:0045637,GO:0045638,GO:0045787,GO:0045814,GO:0045892,GO:0045893,GO:0045910,GO:0045934,GO:0045935,GO:0045937,GO:0045943,GO:0045944,GO:0046483,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048581,GO:0048583,GO:0048598,GO:0048646,GO:0048731,GO:0048831,GO:0048856,GO:0048869,GO:0050684,GO:0050685,GO:0050789,GO:0050793,GO:0050794,GO:0050815,GO:0050896,GO:0051052,GO:0051053,GO:0051093,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051219,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051569,GO:0051641,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0055029,GO:0060255,GO:0060795,GO:0060968,GO:0061695,GO:0065007,GO:0070013,GO:0070063,GO:0070647,GO:0070727,GO:0070887,GO:0070911,GO:0071103,GO:0071216,GO:0071219,GO:0071222,GO:0071310,GO:0071396,GO:0071704,GO:0071824,GO:0071840,GO:0072359,GO:0080090,GO:0080134,GO:0080135,GO:0090068,GO:0090262,GO:0090304,GO:0097659,GO:0098727,GO:0098781,GO:0099122,GO:0140110,GO:1901360,GO:1901362,GO:1901407,GO:1901409,GO:1901564,GO:1901576,GO:1901700,GO:1901701,GO:1901987,GO:1901989,GO:1902275,GO:1902494,GO:1902679,GO:1902680,GO:1902806,GO:1902808,GO:1903047,GO:1903311,GO:1903313,GO:1903320,GO:1903506,GO:1903507,GO:1903508,GO:1903706,GO:1903707,GO:1905269,GO:1990234,GO:1990269,GO:2000026,GO:2000112,GO:2000113,GO:2000241,GO:2000242,GO:2000819,GO:2001020,GO:2001141,GO:2001163,GO:2001165,GO:2001166,GO:2001173,GO:2001207,GO:2001209,GO:2001252,GO:2001253,GO:2001255
EggNOG free text desc.transcription elongation from RNA polymerase II promoter
EggNOG OGsKOG2478@1,KOG2478@2759
Ec32 ortholog descriptionRNA polymerase II-associated, Paf1
Ec32 orthologEc-19_002080.1
EC1.2.1.88
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03021,ko03036
Exons12
Model size1932
Cds size1362
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1275.2036.1prot_F-serratus_M_contig1275.2036.1Fucus serratus malepolypeptideF-serratus_M_contig1275 99612..110939 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929208.772455-UTR-F-serratus_M_contig1275:99196..996111622929208.772455-UTR-F-serratus_M_contig1275:99196..99611Fucus serratus maleUTRF-serratus_M_contig1275 99197..99611 -
1690962751.088337-UTR-F-serratus_M_contig1275:99196..996111690962751.088337-UTR-F-serratus_M_contig1275:99196..99611Fucus serratus maleUTRF-serratus_M_contig1275 99197..99611 -
1622929209.034755-UTR-F-serratus_M_contig1275:110939..1110941622929209.034755-UTR-F-serratus_M_contig1275:110939..111094Fucus serratus maleUTRF-serratus_M_contig1275 110940..111094 -
1690962751.2234836-UTR-F-serratus_M_contig1275:110939..1110941690962751.2234836-UTR-F-serratus_M_contig1275:110939..111094Fucus serratus maleUTRF-serratus_M_contig1275 110940..111094 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929208.7981625-CDS-F-serratus_M_contig1275:99611..996771622929208.7981625-CDS-F-serratus_M_contig1275:99611..99677Fucus serratus maleCDSF-serratus_M_contig1275 99612..99677 -
1690962751.101062-CDS-F-serratus_M_contig1275:99611..996771690962751.101062-CDS-F-serratus_M_contig1275:99611..99677Fucus serratus maleCDSF-serratus_M_contig1275 99612..99677 -
1622929208.8126616-CDS-F-serratus_M_contig1275:100285..1004081622929208.8126616-CDS-F-serratus_M_contig1275:100285..100408Fucus serratus maleCDSF-serratus_M_contig1275 100286..100408 -
1690962751.11002-CDS-F-serratus_M_contig1275:100285..1004081690962751.11002-CDS-F-serratus_M_contig1275:100285..100408Fucus serratus maleCDSF-serratus_M_contig1275 100286..100408 -
1622929208.8287752-CDS-F-serratus_M_contig1275:100841..1010571622929208.8287752-CDS-F-serratus_M_contig1275:100841..101057Fucus serratus maleCDSF-serratus_M_contig1275 100842..101057 -
1690962751.1220894-CDS-F-serratus_M_contig1275:100841..1010571690962751.1220894-CDS-F-serratus_M_contig1275:100841..101057Fucus serratus maleCDSF-serratus_M_contig1275 100842..101057 -
1622929208.8535948-CDS-F-serratus_M_contig1275:101827..1018901622929208.8535948-CDS-F-serratus_M_contig1275:101827..101890Fucus serratus maleCDSF-serratus_M_contig1275 101828..101890 -
1690962751.1391823-CDS-F-serratus_M_contig1275:101827..1018901690962751.1391823-CDS-F-serratus_M_contig1275:101827..101890Fucus serratus maleCDSF-serratus_M_contig1275 101828..101890 -
1622929208.8934152-CDS-F-serratus_M_contig1275:102377..1024671622929208.8934152-CDS-F-serratus_M_contig1275:102377..102467Fucus serratus maleCDSF-serratus_M_contig1275 102378..102467 -
1690962751.1476612-CDS-F-serratus_M_contig1275:102377..1024671690962751.1476612-CDS-F-serratus_M_contig1275:102377..102467Fucus serratus maleCDSF-serratus_M_contig1275 102378..102467 -
1622929208.9130256-CDS-F-serratus_M_contig1275:103320..1034881622929208.9130256-CDS-F-serratus_M_contig1275:103320..103488Fucus serratus maleCDSF-serratus_M_contig1275 103321..103488 -
1690962751.157277-CDS-F-serratus_M_contig1275:103320..1034881690962751.157277-CDS-F-serratus_M_contig1275:103320..103488Fucus serratus maleCDSF-serratus_M_contig1275 103321..103488 -
1622929208.9261003-CDS-F-serratus_M_contig1275:104038..1041161622929208.9261003-CDS-F-serratus_M_contig1275:104038..104116Fucus serratus maleCDSF-serratus_M_contig1275 104039..104116 -
1690962751.1683352-CDS-F-serratus_M_contig1275:104038..1041161690962751.1683352-CDS-F-serratus_M_contig1275:104038..104116Fucus serratus maleCDSF-serratus_M_contig1275 104039..104116 -
1622929208.9413102-CDS-F-serratus_M_contig1275:105654..1058011622929208.9413102-CDS-F-serratus_M_contig1275:105654..105801Fucus serratus maleCDSF-serratus_M_contig1275 105655..105801 -
1690962751.1799912-CDS-F-serratus_M_contig1275:105654..1058011690962751.1799912-CDS-F-serratus_M_contig1275:105654..105801Fucus serratus maleCDSF-serratus_M_contig1275 105655..105801 -
1622929208.9641402-CDS-F-serratus_M_contig1275:106383..1064881622929208.9641402-CDS-F-serratus_M_contig1275:106383..106488Fucus serratus maleCDSF-serratus_M_contig1275 106384..106488 -
1690962751.187943-CDS-F-serratus_M_contig1275:106383..1064881690962751.187943-CDS-F-serratus_M_contig1275:106383..106488Fucus serratus maleCDSF-serratus_M_contig1275 106384..106488 -
1622929208.9785666-CDS-F-serratus_M_contig1275:107382..1075191622929208.9785666-CDS-F-serratus_M_contig1275:107382..107519Fucus serratus maleCDSF-serratus_M_contig1275 107383..107519 -
1690962751.19696-CDS-F-serratus_M_contig1275:107382..1075191690962751.19696-CDS-F-serratus_M_contig1275:107382..107519Fucus serratus maleCDSF-serratus_M_contig1275 107383..107519 -
1622929208.9945946-CDS-F-serratus_M_contig1275:108765..1089101622929208.9945946-CDS-F-serratus_M_contig1275:108765..108910Fucus serratus maleCDSF-serratus_M_contig1275 108766..108910 -
1690962751.2053947-CDS-F-serratus_M_contig1275:108765..1089101690962751.2053947-CDS-F-serratus_M_contig1275:108765..108910Fucus serratus maleCDSF-serratus_M_contig1275 108766..108910 -
1622929209.011597-CDS-F-serratus_M_contig1275:110915..1109391622929209.011597-CDS-F-serratus_M_contig1275:110915..110939Fucus serratus maleCDSF-serratus_M_contig1275 110916..110939 -
1690962751.2140703-CDS-F-serratus_M_contig1275:110915..1109391690962751.2140703-CDS-F-serratus_M_contig1275:110915..110939Fucus serratus maleCDSF-serratus_M_contig1275 110916..110939 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1275.2036.1

>prot_F-serratus_M_contig1275.2036.1 ID=prot_F-serratus_M_contig1275.2036.1|Name=mRNA_F-serratus_M_contig1275.2036.1|organism=Fucus serratus male|type=polypeptide|length=454bp
MDTSYKWKLHYERDLGVPIDIIDPRNYILPKNPVPLPKEDEALLNWGEGD
VPTSSAGRREALSTSARRRAVDTSVTWLKRTVYLTNDPFDPVHQFKSEQQ
AQADKRAELEKEIARGGQQDRKMLIEESFMHANSRKPLVHSDVKKRHLTA
EWVMPVMPDLSLWPNTYTTVAFDKDPAEDDTVKGTEARKRKRTNEALVCN
VKRTTFEGSSHEVITGSYLLPKDKKHKGDEGDDDDDDDDEGDNQEEEEEG
EGLGYAFAKDYKFNIIHYAQNQFDGNPHLLFMTNPETGQATYCKLSAKVE
LANLPREQGQPVTGRGARVSRRALSEDEITNARKKVSADLQLEGDYDYLP
GLVVTESDFAGEKEQGNEEAPGLEDDDDEEDLRENGHAGGADYDNQEDNN
GSRAWNGGASDAERESLLSMTMESEASNVAVKGTESSEADIIGVNTDDND
SEP*
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mRNA from alignment at F-serratus_M_contig1275:99197..111094-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1275.2036.1 ID=mRNA_F-serratus_M_contig1275.2036.1|Name=mRNA_F-serratus_M_contig1275.2036.1|organism=Fucus serratus male|type=mRNA|length=11898bp|location=Sequence derived from alignment at F-serratus_M_contig1275:99197..111094- (Fucus serratus male)
AAAAAATAAACAAGGCCAGGAGAAAATGGCAGAAACAGTCCGAGTTCCTC TGTAATATCAAGTTCCGGAATAACCTGCCAGACCCACCGCTGGGCCCCCA CTTCCTGGAGGTTCCTCTTGACCTGGACAAGTACGCCAACTTCGCACCGA CTACGATGGATACAAGCTACAAGTGGAAGGCAAGACGAGAGAGCGTCCCT CCTTGGTACTATTAATAGTAATAAATTAGCATATTAGTCTAGTGCTACAA TAAAATAGAGAGAGTAGAGTAGAGTAGAGTAAAACCTTTTGTACGGTACG ATTGTCGTAACACATATCTACTCTACCAGGTACCAATTGTACTAATATAC TATTGTACTAATGTCCTAATATACTATTCTAACTGTTATGCTATTATTAG TGGGTGTGGAAAAAGAGGGGCGCACGAAAATTGGTGTATATTTTTCACTT GGATTGTAGCATATGTTAATGGAACTATTAATCCCTTGAGGGTTACCGGC TCTGTGCCAGCGAACTCCTGGCGATGAACGCCATCGGTACGCAATGGCGT GACCCGATAAACCCTGGACTGACCCTATCGATGATCGATGATGGATGGTT GGGAGAGGAGAGGAGCCGTCCCGTGAGTAAGCACCACATTCAGCCCGAGT GCTGAGGAGGAACGGGCTGCCGGTGAATGAGACAGCCGCACCTGTCTCGC GAGACCAAATCCTCAGGCGCGAACGGGGACAGGGGGAAATCATTTCCCTG TCCGCTGACCACGAGCAGGATTGCCTACCATGCCGGTTGATACCCAGTCT GCTGTATGTGACGGCCATACATGCATGGCTTTCATTCAGAAGTGTCTGTA TGTTAGTACAGAAGTGTTATTCACGCTCGAGTATCTGTTTTTGGTGCAGA TGTGCAGATGTGGCACCTAACGGCCTCGCTGCCCGCGGGGATCGTGATCC GTAGAGGTAAACATCACATCAAACCTTTTAGCGAGAGGGCTCGCTTGATG TACAGCATCTGACGTTGCCACGGAAGTAATCCCACTACAGTAATTTAGTT GTTGTTGTTGTTTGTTGTTTCTCACATTCAGCGTATTGGTTGCCAACCCG AAAAAACTACTTTACACGGTGGCCAATCCCGCTCGTGGTCTGCTGAATAG AGAAAAGAGAACAAAATAAAAAAGTCTGGCAGCATACCCCCCCCCACCCC TACACTGCTCGTTTGGAGAAAAAAAACACGCTACGCATCTACAGGCGCTA CGCAGGTCTCGGTCGGTCTCGCGTCCGTACAAAGATATCTTAAGTATGGT ACCTGGTCGCGAACACTACAAAAAGTACATAACATGTACATACTCCGTAC TTGGTACCCGTACAGGGTAATAGTTTGCTGATTTTTGTCTTGTATCTGTA GTTGATCTGCTTGCCCGCGATAAATATATTTATTTTTGTAATAGGAGCAA TGCGAAAGAAAACACCGTTAACGCCGTTTATCTTTGAGGGGGAGAGGGGG GGGGGTGAACCGGTTGTAGTTTTTGGTGCCGATTCGAGTGAAATTCTAAA CGTGGGGTCTCCCTTTAATCCTTCTTGCCTCCCTCCTTCTTTGGCTTCAC TCGTTCACCAGCACCCACTACTGTACCATCACTGTCGGGTGCATGTTACT CCCCAGCACTCCTCTTTCCAGTGTCTGTTACTCTACGGTGTAAATAATAT TTAACACTATCAATAGTAATAATAGAGCTCGTATTCATAGCTTGTAGTGT ACCTTGTATTTGGCGAAACGAAGTACACTATTAACAGTGCTACTGATAGA GCGTCTGTCGCGATCGAGAGTTTTCCCCCGATGCGTGAGGATGCTGCTTG CTTGGCATGTCCTGATGGCTGTCTCTTTACAGCAATAAACGGTGAAAGTG TTTGTGTTCGTGTTTTGTCCTTGTCTCTGTGTTTGCCAGTGCCTCCACGC ACGTGAAAATCTTTCGCGGAAGTTACAGACAGTGTTAACATCAGTAGCTA CAGTACACTCCGTGAGTAATACCAGGTAATATTGAAAAGGCGCACGACGA GATAAAGAGGCAGTAAGTAGCCACCGTTTTTGATCCGCGTGATTATGAAA TTTCTCTCCCTCTGCCTCTCTCCGACTCAAAAACCAACGACTGTTACTGT TACTGTACTGATACGTTGTGCCGTAATATTACAGCTGCACTACGAAAGGG ACCTGGGGGTACCCATAGACATCATTGACCCCAGGAATTACATATTGCCG AAGAACCCGGTGCCCTTGCCAAAGGAAGACGAAGCGCTGCTAAACTGGGG AGAAGGAGACGTCCCTACGAGTAGCGCGGGTGAGTCTTGGGTCTAGTATT ATAAATTCTAAGTGTAAGTGTAATAGACAAAAGAGAGAAGGAGTGTCTTC TGTCTCTGGATTCTGCCGTAGGAACGAAGCCGGGGGTTATAGTGGTAGTT TTTGTAATGGGAGCGGAGGGTGGCACCGCAAGACTTGCCGCGGATACTCT CCAAAAATATTGGCTGCGGTTGGACGCTCTCGTTTGCGAACACTCAAGAC CCCGTCCGCGTTGGGTGGGTATAGCTAAACAGCACTAGACTATACAACAC TAGCACCGAGCTTACATTACTCATCGTTGACACGCTGTTCTGTGGGTGTT GTGTTGTTTAGTACCAGTGCCTGTACAGTACGGAACTCGTACCCTTCGTG AAAATTCCCCGGCCAGTCCGTTAGGTCATCGCGATACACCATGTATGTAT GGTCCCACATATAGCAAGAGTATGGATCAACCTGGTAAGGTTGCCAATCC TGCTCGTGGTCAGTTAAACAGGGAAAGGAATATTCCCCTGTCCGCGTTCG TGCCTGAGAATTTGGTCTCGCGAGACGGTTTCGGCAGTCCCGTCCCGCGT CAGCCTGCTCATCTCCATACTCAGGCTGAATCTGGTGCTTACTTATGAGA TTCCTCCCGAGTTCCGCGGCGGCGTCCATATATTTATATTAAACCGCCAT ACGCCATCGGGTAAGCCCCGAGTTTATCGGGTCACGCATTTGCGTACCGA TGGCGTTCACCGCCGAGAGTCCGTCGGAACAGAGCCAGTTAACCTCAAAG TAGTTCCGAACGAGTGCTGCCTTAGCAGGTCACCATGGACCAATTAATTT ACGCCTCTCTTTCCCACACCATATCCACGCCCAAATAAAAATAAGAAAAC TCAACACAATTACTTAGAAAAGTATAGAACCCCTCCCCTCCCTCCCCTCC TCTCTCCCTCCCCAAGGCGCGGATCGAGTTGATCGAGTGGATTGAGTAGC CTCTGTTTATCCTATTAATACTACCGTAAGTACGAAATACTACGACAATA TTAATAATAGCTGCCAGGTACTATTAATAGAAACCTTCGGTCGTATCCCG CAGAGCCCTGTATGTTTCAACTTCAACGTCAACTCGCCGCCCCTTGGCGT GAAGACGTGACGTGACATGATATTTAATTTTTCAACATGAACAGAAGGCA TTCGCTGTTTTGCGACGGGAAACGCGCCCCTCCCCCCCCGTCCCGTCCCG TCTGGTCCCGTCCCTTCCTTTGCAGGACGAAGGGAAGCTCTGTCTACCTC AGCGCGGCGCAGGGCGGTCGATACGTCCGTGACCTGGCTGAAGAGGACCG TGTACCTCACCAACGACCCGTTCGACCCCGTGCACCAGTTCAAGTCGGAG CAGCAGGCCCAGGCAAGGGAGATGCATGCCTGGTACTCGCATTGGACGCC TGTTTATAGTGCTTGTATTAACAGTGTTGATGGTGTTTGTAGAATATGGC GACGGAGAGGGGGGAGGTAGAGAGGTGTTGTTATGCATCTATAATATGGT GTACCCCTGTCGTTGGTTCCACATTTGATATTTGATACCCAGGTATTTGA TAGAGGAATGCAGTCTCATTAGTCTAGCTATGAGAGCTATGGCTGACTGA GTTGTGACCACCACGAGGATGATCCGTTACAGAAGTAGAATGAAGGAATT GTTGAGTTGCGAAGATAATATGAGACAGTAATGTTAATGGCAATAACGAT TGGTGGAAGCGTACCGCAGAGAGATTTAACGGTAGACTTCTCCCCGACAC TATATTCTACTGAACCAATGTACGGCCAGCATTGAATGAAAAAACAATTT ACCAGGTACCCGATTTAGTCCCATGCGAAGTTTTTGTTATCGTTAGTAAT AGGTGTACAATGCCGAACAGTACCCACTTGAAGTCCCTTGCCTTACGTAG ACATCTCCCGCGAGGTGGGACGAGGATTGGGTGCTCACGAGGGTTTTGTT GGTGCGAGGCGTTACTGTGACAGTGAGTAATACAGTAAGAAAAGTGGGGA TCAAGGACCAAACAAGAACAATAGAAAAAAAAAGGTACCGGTATGACGTT TCTTGCCAACCCCCCGTGGGATTATTATCCCCTCAACAGCGCGTCACTGA TCTGGCCTGCCTCGGTTATGTGAACCAAATCCAACGGTTGGAACTGAAAT ACTTCTCACGTACTGTACGTGGTGAAAAACAAATTAAAATAAAGGCCGCA CAATACGGCATGAAATGATATTTTGTTGCGCAACTGGTGCTGACCGCGGC GCTCAGGCTGACAAGCGGGCGGAGCTGGAAAAGGAGATCGCGAGAGGAGG GCAACAGGACCGAAAGATGCTCATCGAGGAGTCCTTTATGCACGCCAATA GTCGGAAGCCGGTGAGACTCTCGCTCTTCCTTTAAATGTCCCGTCCTTTT GGTGCGCTCGAGCGGTGGGCCGATGGGTCGACCTGTTGGTCGTTGGGTTG ATTGATGTGTCTATATCTGTCTGACGTTCTGTCTCTGCTGAGCCTTGAAT GCGAAGGTCAACTGCTTAGTTTTTCTTGAGTATTGCTCGCTCGTGGCGGT TCGAACGAGAACACGAGAACAGGAAAACAAGCGGTACACGTTACATCTGG TGTAGGCGTTAATCATTCCGACGTGCGTCACCCAGATGGTCTACTGCAGC AGTGGGGGGGGTTAATGTGTTATCGGTAAAATTTGGGTATGCTGGTATTC TCCGTACGTACGTAAGGATCCCTGCAGGTTTCCACGGATCTAAAACTGTG CAACTCTACTACAACAGTGGAACCTAGCTCTGGTACTGTAGTACATCGTG TCGATCGTTCCAACCCTCACCGTCATCCTCATCCTTCCCCTCACTTCCCA CCCCCCCCTCTCCCTGTCGTTTGTGTCACACGTCTACGTTTACGTATGTC TACATATATCTACGTCTACGCGTGTGTACGTGCGACGCGCCAGCTGGTAC ACTCGGACGTGAAGAAGCGACACCTGACGGCGGAATGGGTCATGCCCGTC ATGCCAGATTTGTCCCTCTGGCCGAACACCTACACGACAGTGGCGTTCGA CAAGGACCCCGCCGAGGACGACACGGTGAAGGGCACAGAGGTGATGCGAG ATCGGGGGAAGAGTGCCAACAAGCACGGTACACGGTACGAGCGAAGCGAA ACAGAAAACAGAGCCGAACAAACAAAAGCAAAAATAAAGTAGAGAAGGCG AACCGAATCGAATCGAAAGTTTATTTTTGACGAACATTATCGAAGCGGGA GACGAACAGAAACGAAAAAGTTGTGCTACCGTAAGTATCGGAGTCTTGGC ACACCCCCTAGACTAACCTTCCAGGTTCGATTGCTCCACAACCAAGATGA TGTGAACCCCCACCGATACGTCTAAAGATAGCTCTCGACGAGATCATCAA TCTTTCGAAAACCGCCCTTTTCGGCATTGGCACCTTATAACCAGTATAAC TCTCTTGGTTATGGAGCAATCGAGCCTGAATAATCAGTCTAGGGGGTGCG CCAAGACTCTGATACTTACGATAGTACCGTGTGACCATACATACATACCA GTACAGTATAACGAACGTTTTAATAAAAAGCAACGTGAAAGGGTTTTCCG TCCATAAACGGGCTTTTGGGTGGGGCAGGGAGCTTTGCTGTTTGGGGTAT ATATATTAAAGCACTTACTGCATGAAGTACTCGTACAGGACAGGTTAGAA GACTCGTTTGCTTTTTAGCGTCGTCCTCTTTCCCGAACAAATTTTGTCCC GGGTACGAAAGTATGGCGAGAAGCCTTTTGAAATACCTCCAAAGAAACGA CAAAACCCAAAGAGATGGATGACTGTCGTCCTTCTCGCTTCTCGCCTGGC CAACATTAAAATTTATCCAGTTTGATTTGACACTTGCGGTCGTTGCCATC ATTTCGACCTTTCAAAAGTGATGCCACTTTTAGTTATTAATACTGTGGTT TTGATGTCAACCGTTTGTTTTGGCGGTACGAGTGTTTGTATCGTGTGTAG TGCAATGCAATGTGAATACAGCCAATGGTATGGATCGACCGATCGGTCGG TCTGGGTCACAAAATAACAGCAAAATGCTGTACAAACCATATGAAATGCT CATATATAGTACAAACGGAGTGGAGTTGAACGTTACACCCTTCGTATAAG TACATATTATTAATATTAGTACTGTACTGTAGCAGAGTATATAGTAGTAA TGATAACAGTATGGTACTTGATAATTTTGTAGACTCGGCGCTGTCCAGTG ACATTGGAGGAGGCTTTCTCAAGTATCTCATGTATGGATGGATGTATCTA CCTCTATGTTTTTATTAATTAGCACATAACCACGCAATCCGAACCTGTCC TGCCAATATACAGTAGCCATTCTATGCTACTCGCATCCCCCCAGTGTACG TATGTATGTAGTATGTATATATATATATATATTATATAAGTTGCTCTGGC CATACAAAAACAGCGCAATCCGACTATAGCTCTAGCTCTAAAATAGCGGT CACGAAAATTCATGAATGGATGTAAGTAAGTACCTATGTCTGTATGATGT ATATTTTGATGTGTATTTCTGTATTTCTGCATGAACTGCATCCATGTACC ATGTATTTGTGTGTGCGTTTTGGTTCAGGCACGCAAGAGGAAGAGGACGA ACGAGGCCCTGGTGTGCAATGTTAAAAGGACAACGTTCGAGGGCAGCTCG CACGAGGTACTGTAATCACTCATATTAATAGCTCTAGAGGGCTGGATACA TTCATTTTCATGGATATGACTACATTGTACATGGTTATAGACTCAAAAAA ATGACTGCTTATTTCAAGACTACACCGGGCAGAGGAGTCGTATTATCATT CCATCATTCCATCATATATTGCGTACTGTATCGTACGCGTTGATAATCAA ACTATTCAATGGGGAGAATCTCGTAGAGTCGAGATCAGGTCCGCTTGCTG GAACGTTTCTTTCAGTTTTTTGTTTTTGTTTTGTTTTGAGGGGGGGCGGT GGCGGCGATCGATCGATCGATCAACAACCTGCACGTGTCAGAATCAGAGC TACGTCATACCGGAGTATATGCTGGTTTTGTACATAAGTTGTTTCATGTG TGTGATGTTGTGCAAAAGGTTGTCCGCCTTTCTCGTGGGCGTGATTTGCC GGGGATGTTTATTCCATCTCCCCTCCCCCACCGCCTTGATGCACAATGCC TAAAGGGATTGACGGAATAGCCTCTTTCCTTCCCTGTGGGACCAATGATC GCTCAGGTCATCACGGGGTCTTACCTGCTGCCGAAGGACAAGAAGCACAA GGGGGACGAGGGCGACGATGATGACGATGATGACGACGAAGGTGATAACC AAGAAGAGGAAGAGGAAGGCGAAGGTTTGGGATATGCGTTCGCAAAGGAC TACAAGTTCAACATTATACACTACGTGAGTGAAGAGAGTTTGATCGATCG TGTCGCGTAACCTGTGCTCGGGATGAGGCTACTTCGTTATTTATGCATGT TATTTATGTGATGTTATTTTCTGTTTTGTAAACGGAATTTTTCTCACTAA AAATGAAAAAATAAAAATGCCCATCAAGCAAAGAACGATTGAATCGTTAG TACATTATTTTCGACTTCACGGTCCACGAGGGAAAGGAACGGCTGAATCC TCGCGAGGAAAATTAAGGCACGCACCGCAGGAGGAAGGTGGATAAGAAAT CTTGTGTGACCTTCCTCCTGTGTGACGCCGGCTGGTACGTCCAACGAACT TGATGACCATAATAAATAGGAAGAAAACACGCATTGTGTTATATTGTATT GGTAACGGTGTAAAGTATACTTGTAGGAGTGGGAGGCCAAGATCGGTGAA TGTGAATGTGATTTGGAACTAAAGCAGCGAGAGAGAGGAGGGCGGGCTGT GTCGGACTTCCGTGCTTTGGTTGAAAGAGGCGTTTTTCTTCTCCTGTCGC TCTCTTTTTCCCTCCCCGTCGTCTTTTCGACCGAGTTTGTGCCCGATGCC GAGTCTCTTACGGCCTCTTGAGGTCTCCCTTGGCTGGATGTATTTGGGTA CTCCACTGTAGTATATTATCTGTATCCATCTTTTGTCTTACTGGTGTTAT CGATAACGGTCCTGATCGACGTAGCAGCAGCCGTCTGCTGCTGCTGCTGT ATGGAAAGCTATTATAATAAAGTACTAGTCAATAGAGGGTAGTAATTGTA TTTTGTATCTTCTCTTCGTCACGTGTTGCTTGTTGTTGCCATGTTGCCCT TTTATCTTGCCACCGGCTGGTTCACAGGCTCAGAACCAATTCGATGGAAA TCCCCACCTCCTGTTCATGACCAATCCGGAAACCGGTCAAGCCACCTACT GCAAGCTCTCCGCGAAGGTGCTGAAAAACTGCGTCGTCAAAGCATCGCTC TCTTTTGGCGAGAGATGATACATTTGTTTGTATATTTATATTTATTTTAT GGAACACCTCGTTCTCCGGAGTAATATGTTATACCTTGCTTGGTCTTTCG TGATACATTCAATCCTCCTCATTCCTTGTTTTCTTTTAGCTCGGCGTTCG TCTGGCGGAGCTCAAGGTACCCCCCACCCTCGCCCAAGCTCCGAAGCGAT ATTCCCTTTGACACCTTAGACATGAACTTCTACGCTTTTCGCCCACGCAC AGAGGACACACCGAGACGCGTGCTCGTTCCCTGAGCCTGCGCCGACTATG TTGGCGCAAGCGAACCTCTCTACGCCGATGTTGTCGCGATGTAAACACAA GACACTCAAATAATACATGAGAGTTCGGTGTGTAATGAGGCGTTTACGGT TCGCACCCCTCTTAACGAACACCCGTCATCATCGCCCGTCCTCGCGAACT AAAGGTGGAGCTGGCAAACCTTCCGAGGGAGCAGGGTCAGCCGGTAACTG GACGGGGGGCTCGCGTGGTGAGTAACTTTAGTACAGTACAATATTAGTGC ATAACTTGTACGGAATGTTCATACTATCAATATTGATATTAATATTTAGT ATACCACAAAACCACAGCAAGTTGGGCGGCGGGGGCTCCATAAGAAATCA AGAGTCAACGGTCAAGGTCTGTTTCCTACTCGGGCTGTGAAATATTTCCA ATTGCTGTTTGTGCTTTTCGTCGCCGCTGTCAGTGAAAATGGCGGGATGG TAAATTGCGTAAGGCGGCTGGGTAATTTTTAACGAAGAGTTTTGCGTTCT TTGTCGGCGTCCTGTGATTGGTCAGCGTGCATCGCGCGGCTTGTCTGGGG GGGTGGGGTTTTCGCATGTTTTTTCGCAATCGCATTTCATTCTACAAATA ATCTTACCTGTAGTGATGGTGTTTATAAAAATATACTGGTAGTTTATACT TTTTCTCTCGTTTCTCTTGTTTTTCTGGTTATGAAATGTCTGGAATTCAC ATGCGCCACTCTACAAGCATGCTGGGAATGTATTCATACTTTTTCACTTG TGACGGTATACAAGCAAACCCTTGTGAAGGCTGTGGTATTGATCTAGCTC TGTAGATTCTCCGGTAAAAACTGTTTACGTTCTGCATGGTGTTGTTTTGT TTTTAACGGTGTGTGCTTCCTAATTTATTTATTTTAATGCCTTGTTTTTT GTGTCCTTTTATACTGGTATGTCTGTTCTGACTTTTTTCTTTTTTTTTCT TGGGGGGGTGATTGTCTGCGGGATTGGTGTTTTTCAGTCCAGGCGAGCTT TGTCAGAAGACGAGATCACCAATGCTCGCAAGAAGGTCTCCGCAGACTTA CAGCTGGAGGGTGACTATGATTACCTCCCGGGCCTGGTAGTCACCGAGAG TGACTTCGCAGGGGAGAAGGAGCAAGGCAACGAGGAGGCTCCTGGGCTAG AGGACGACGACGACGAAGAAGACCTGAGGGAGAACGGCCATGCGGGTGGA GCGGTGAGTTAGAAGGATCGCTGAAATCTGCTTGATGTTCTTGTAGAGCC TGCGCTGTGCGTTGTTGTGCGTGCGTGCCATTCCCCCGCAGCATTTTCGA TCCCACCATACCTGACCATACACATACATACCTGGTACATACCAGTACAT AGCTACCTACGTAACCTACATACATACCCACCATTTCACCCATCGTTTTT TCGTATCACTTTATGTCTGTAGTGCGTCGTGAGACATTGTTAAATATAAT ATACCGGTATAGCTATGTATAGAGTACAGAGAGAGCTGGGCCGCCGCGTG GAACTAATGCATTTGATTATCTCCTTTCTGCTCTGTTCCCCTGATTTAAT TAAATTTGTGCTCTGCCCCATGGCTCACGTGTGTGTGTGCGCGCGTGTGT TTGTGGGTTCTCCGAAACAAACGATTATAATAAAAGGACTATGACAACCA AGAAGACAACAATGGGTCTCGGGCATGGAACGGTGGTGCTTCCGACGCGG AGCGGGAGTCATTGCTCAGCATGACCATGGAGTCCGAGGCGTCGAATGTT GCCGTCAAGGTTTGTTGTAGATATATCTGTTATCGGCTTCGTAAATTGTT GTAGAAAATGTTGGGGGTGGGGCAGGGGGAGTTCTGGGTGTAGGGGGTCC GTATGGAGCACCTGTTCGTGGGTGGTGGACAGGGTTACTGTTAAGCTCTT AAAGATGTTCGGTTGGCCTTTCTTCGACCAGTATTGGCACGAAGTTCTAC GGTTGTAGCGTGGTGACGCGACCGAAAATGCTGTAAGGCGTTTTACTTCG CGTGGTGGGGAGGGGGAGGGGCTGATTTCGGCAGCCTCGATAAAGAGGAT CGAAGGTGGTGCGCGTTACGATCGGTTCGCGTTTGAGTTCGCCTATCTGA CCCTTACCAGTATAATATTTTCTGGGGTTTTCAGGCACCCGGACTATGTA ATACAGTTAGACCGCCGCTACTTCATATTTTTATTTTATTTTTCTCCCAT GTATGCCACCATCTCATAACTTTTCAGCGAATTTTGATAAACAACCCGAA AACCCCAAAAGCCTTTGGAAATAATGCGCTCTGTGTGCATCACCTAACAG CGTTCCCTCCCTCATTCATTCGTGTCACTGGATGGTGTTCGACCTCGTGG TATGGCGTTCGCGTCAGGGGACTGAAAGCTCTGAGGCAGACATCATTGGA GTCAACACGGACGACAACGATTCGGAGCCTTGACCTGGCTTACAAGTTAA TTGAAGCCCTGCTCCCACGTTTTCTCAAGAATATACGTGGTGCCTCAAGA GTATGAGCTAAGCAAGTGCACACGTGGTTGCCTGACGGGAGCGCTGAACG GGGCAAGATGTCGTCTTCCACAAGCACTTGAACGTCTTACTCTCTGTTAA GAAAAATCTGTACGCTTTGTTGTTGGATTATTGGGCAAACAACGATTAGC TCTTAAATGGAGAAAGAAAAATCGGTTGATCGGCCGTAACTCCCGTCTCC TGGATTGATTGCCATTTCCTAGAGGGAGTGAGAGCTGTAGAGCGCTTGTT GATGGAAATGAGTGGGTTCCGCTGATTCCCGCTGGAGCTATTGCTTGTTA TTTATAGCTGGAAGTGACGATGAGTCAAGTCGAAACAAGCGAGAGTCA
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Coding sequence (CDS) from alignment at F-serratus_M_contig1275:99197..111094-

>mRNA_F-serratus_M_contig1275.2036.1 ID=mRNA_F-serratus_M_contig1275.2036.1|Name=mRNA_F-serratus_M_contig1275.2036.1|organism=Fucus serratus male|type=CDS|length=2724bp|location=Sequence derived from alignment at F-serratus_M_contig1275:99197..111094- (Fucus serratus male)
ATGGATACAAGCTACAAGTGGAAGATGGATACAAGCTACAAGTGGAAGCT
GCACTACGAAAGGGACCTGGGGGTACCCATAGACATCATTGACCCCAGGA
ATTACATATTGCCGAAGAACCCGGTGCCCTTGCCAAAGGAAGACGAAGCG
CTGCTAAACTGGGGAGAAGGAGACGTCCCTACGAGTAGCGCGGCTGCACT
ACGAAAGGGACCTGGGGGTACCCATAGACATCATTGACCCCAGGAATTAC
ATATTGCCGAAGAACCCGGTGCCCTTGCCAAAGGAAGACGAAGCGCTGCT
AAACTGGGGAGAAGGAGACGTCCCTACGAGTAGCGCGGGACGAAGGGAAG
CTCTGTCTACCTCAGCGCGGCGCAGGGCGGTCGATACGTCCGTGACCTGG
CTGAAGAGGACCGTGTACCTCACCAACGACCCGTTCGACCCCGTGCACCA
GTTCAAGTCGGAGCAGCAGGCCCAGGACGAAGGGAAGCTCTGTCTACCTC
AGCGCGGCGCAGGGCGGTCGATACGTCCGTGACCTGGCTGAAGAGGACCG
TGTACCTCACCAACGACCCGTTCGACCCCGTGCACCAGTTCAAGTCGGAG
CAGCAGGCCCAGGCTGACAAGCGGGCGGAGCTGGAAAAGGAGATCGCGAG
AGGAGGGCAACAGGACCGAAAGATGCTCATCGAGGAGTCCTTTATGCACG
CCAATAGTCGGAAGCCGGCTGACAAGCGGGCGGAGCTGGAAAAGGAGATC
GCGAGAGGAGGGCAACAGGACCGAAAGATGCTCATCGAGGAGTCCTTTAT
GCACGCCAATAGTCGGAAGCCGCTGGTACACTCGGACGTGAAGAAGCGAC
ACCTGACGGCGGAATGGGTCATGCCCGTCATGCCAGATTTGTCCCTCTGG
CCGAACACCTACACGACAGTGGCGTTCGACAAGGACCCCGCCGAGGACGA
CACGGTGAAGGGCACAGAGCTGGTACACTCGGACGTGAAGAAGCGACACC
TGACGGCGGAATGGGTCATGCCCGTCATGCCAGATTTGTCCCTCTGGCCG
AACACCTACACGACAGTGGCGTTCGACAAGGACCCCGCCGAGGACGACAC
GGTGAAGGGCACAGAGGCACGCAAGAGGAAGAGGACGAACGAGGCCCTGG
TGTGCAATGTTAAAAGGACAACGTTCGAGGGCAGCTCGCACGAGGCACGC
AAGAGGAAGAGGACGAACGAGGCCCTGGTGTGCAATGTTAAAAGGACAAC
GTTCGAGGGCAGCTCGCACGAGGTCATCACGGGGTCTTACCTGCTGCCGA
AGGACAAGAAGCACAAGGGGGACGAGGGCGACGATGATGACGATGATGAC
GACGAAGGTGATAACCAAGAAGAGGAAGAGGAAGGCGAAGGTTTGGGATA
TGCGTTCGCAAAGGACTACAAGTTCAACATTATACACTACGTCATCACGG
GGTCTTACCTGCTGCCGAAGGACAAGAAGCACAAGGGGGACGAGGGCGAC
GATGATGACGATGATGACGACGAAGGTGATAACCAAGAAGAGGAAGAGGA
AGGCGAAGGTTTGGGATATGCGTTCGCAAAGGACTACAAGTTCAACATTA
TACACTACGCTCAGAACCAATTCGATGGAAATCCCCACCTCCTGTTCATG
ACCAATCCGGAAACCGGTCAAGCCACCTACTGCAAGCTCTCCGCGAAGGC
TCAGAACCAATTCGATGGAAATCCCCACCTCCTGTTCATGACCAATCCGG
AAACCGGTCAAGCCACCTACTGCAAGCTCTCCGCGAAGGTGGAGCTGGCA
AACCTTCCGAGGGAGCAGGGTCAGCCGGTAACTGGACGGGGGGCTCGCGT
GGTGGAGCTGGCAAACCTTCCGAGGGAGCAGGGTCAGCCGGTAACTGGAC
GGGGGGCTCGCGTGTCCAGGCGAGCTTTGTCAGAAGACGAGATCACCAAT
GCTCGCAAGAAGGTCTCCGCAGACTTACAGCTGGAGGGTGACTATGATTA
CCTCCCGGGCCTGGTAGTCACCGAGAGTGACTTCGCAGGGGAGAAGGAGC
AAGGCAACGAGGAGGCTCCTGGGCTAGAGGACGACGACGACGAAGAAGAC
CTGAGGGAGAACGGCCATGCGGGTGGAGCGTCCAGGCGAGCTTTGTCAGA
AGACGAGATCACCAATGCTCGCAAGAAGGTCTCCGCAGACTTACAGCTGG
AGGGTGACTATGATTACCTCCCGGGCCTGGTAGTCACCGAGAGTGACTTC
GCAGGGGAGAAGGAGCAAGGCAACGAGGAGGCTCCTGGGCTAGAGGACGA
CGACGACGAAGAAGACCTGAGGGAGAACGGCCATGCGGGTGGAGCGGACT
ATGACAACCAAGAAGACAACAATGGGTCTCGGGCATGGAACGGTGGTGCT
TCCGACGCGGAGCGGGAGTCATTGCTCAGCATGACCATGGAGTCCGAGGC
GTCGAATGTTGCCGTCAAGGACTATGACAACCAAGAAGACAACAATGGGT
CTCGGGCATGGAACGGTGGTGCTTCCGACGCGGAGCGGGAGTCATTGCTC
AGCATGACCATGGAGTCCGAGGCGTCGAATGTTGCCGTCAAGGGGACTGA
AAGCTCTGAGGCAGACATCATTGGAGTCAACACGGACGACAACGATTCGG
AGCCTTGAGGGACTGAAAGCTCTGAGGCAGACATCATTGGAGTCAACACG
GACGACAACGATTCGGAGCCTTGA
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