mRNA_F-serratus_M_contig1257.1924.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1257.1924.1
Unique NamemRNA_F-serratus_M_contig1257.1924.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1257.1924.1 vs. uniprot
Match: D7FMA9_ECTSI (Dehydrogenase/reductase SDR family member 13 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA9_ECTSI)

HSP 1 Score: 395 bits (1016), Expect = 1.770e-133
Identity = 235/395 (59.49%), Postives = 276/395 (69.87%), Query Frame = 1
Query:   43 MSEESRAGLFGG--FISPWLLAAGAGTIGAWVWWRNRQPLSTTG--AMAGRVCVVTGANAGIGKATAMALARQGAHVVLACRSPSKGDAASRDIRRRVSGATVQAMPLDLESTESIRGFVKRFRETNLPLHVLVNNAAGMITGKLETVRGMEKTMVVNHLGPFLLTHLLLPNLQKSAA---------------RPPENGPQNILASRIVNVASRLEKRGELPAAK------DAASATGTVWFQPPPGE-HGAFRQYGASKLCNMLFTFELHRRLAATTAPASDSGGAGRVTVSVVTPGMVNTGLGDNMFSPWVRPMIKLSTAPIKALLLRTVDKGAETVVWAASSPELEG-SSGKYFGDLKECSCSEASQDAELARKLWEASEVATGLNESERVV 1146
            M EE +   +GG   + P LLA   G +GAW+WWRNRQPL T+    M+GRVC+VTGANAGIGKATA ALA++GA VVLACRSP+K  AA  DIRRRV GA + A+ LDL S ESIRGFV+ F +T LPLHVLVNNA     GK  T+RGME++MVVNHLGPFLLTHLLLP+L+K++A               + PEN P    +SRIVNV SRLEKRG L AA       D A   GT WFQPPP + H AF  YG+SKLCNMLFTFEL RRL      A+ SGG   VT ++VTPG+VNT LGD   SPWV      + AP+KA L+RT DKGAETVVWAA+SPE+E    GK+FGD  E  CS+AS+D +LAR+LWEA+E A GL ESERVV
Sbjct:    1 MPEEKQPKPWGGGDHLYPLLLA---GAVGAWLWWRNRQPLPTSSNTTMSGRVCIVTGANAGIGKATATALAQRGARVVLACRSPTKCAAACEDIRRRVPGAALDALSLDLSSVESIRGFVETFHKTGLPLHVLVNNA-----GKPGTIRGMEQSMVVNHLGPFLLTHLLLPDLRKASAAAAAPASAIGHGDREQSPENVPGTGPSSRIVNVGSRLEKRGNLWAAAVSDGGGDTAVPPGTRWFQPPPRKKHDAFGLYGSSKLCNMLFTFELDRRL-----EAARSGGRRLVTANIVTPGIVNTKLGDGTVSPWVA----WAGAPLKAALMRTADKGAETVVWAATSPEIEEIGGGKFFGDKNEVPCSDASRDEDLARQLWEATEQAVGLEESERVV 378          
BLAST of mRNA_F-serratus_M_contig1257.1924.1 vs. uniprot
Match: A0A085WVZ3_9DELT (Retinol dehydrogenase 13 n=2 Tax=Hyalangium minutum TaxID=394096 RepID=A0A085WVZ3_9DELT)

HSP 1 Score: 192 bits (487), Expect = 7.840e-55
Identity = 135/325 (41.54%), Postives = 181/325 (55.69%), Query Frame = 1
Query:  172 MAGRVCVVTGANAGIGKATAMALARQGAHVVLACRSPSKGDAASRDIRRRVSGATVQAMPLDLESTESIRGFVKRFRETNLPLHVLVNNAAGMITGKLETVRGMEKTMVVNHLGPFLLTHLLLPNLQKSAARPPENGPQNILASRIVNVASRLEKRGELPAAKDAASATGTVWFQPPPGEHGAFRQYGASKLCNMLFTFELHRRLAATTAPASDSGGAGRVTVSVVTPGMVNTGLGDNMFSPWVRPMIKLSTAPIKALLLRTVDKGAETVVWAASSPELEGSSGKYFGDL-KECS---CSEASQDAELARKLWEASEVATGLNES 1134
            M  ++C++TGANAG+G+ATA+ALARQGA VV+ CR  ++G+AA  ++R R     V+ M  DL S  SIR FV++F      LH LVNNA   +  +  TV G E  + VNHLG F LT  LL  L+  A             SRIVNV+S   K G+     D          Q   G +   + Y  SKLCN+LFT+EL RRL  T            VT + V PG   T +  N  + ++ P + +  A +++L   T ++GA T VWAAS+PELEG SGKYFG + ++C     S++S D E ARKLWE SE  TG++ S
Sbjct:    1 MQDKICLITGANAGLGRATALALARQGARVVMVCRDKARGEAARDEVRGRSGNREVELMLCDLASLASIRSFVEQFSARYDRLHALVNNAGLALPERRTTVDGFEMVLGVNHLGHFALTLQLLEALRAGAP------------SRIVNVSSY--KHGQYALDFDN--------LQLERG-YSMLKSYAHSKLCNVLFTYELARRLEGTG-----------VTANCVHPGAAATSINANSGAVFLLPAVAMLMA-VRSLGFLTPEEGAVTQVWAASAPELEGVSGKYFGGIWRKCQEERSSKSSYDVETARKLWEYSERVTGVSMS 290          
BLAST of mRNA_F-serratus_M_contig1257.1924.1 vs. uniprot
Match: A0A0F9HXV3_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9HXV3_9ZZZZ)

HSP 1 Score: 190 bits (483), Expect = 1.900e-54
Identity = 139/323 (43.03%), Postives = 179/323 (55.42%), Query Frame = 1
Query:  163 TGAMAGRVCVVTGANAGIGKATAMALARQGAHVVLACRSPSKGDAASRDIRRRVSGATVQAMPLDLESTESIRGFVKRFRETNLPLHVLVNNAAGMITGKLETVRGMEKTMVVNHLGPFLLTHLLLPNLQKSAARPPENGPQNILASRIVNVASRLEKRGELPAAKDAASATGTVWFQPPP--GEHGAFRQYGASKLCNMLFTFELHRRLAATTAPASDSGGAGRVTVSVVTPGMVNTGLGDN-----MFSPWVRPMIKLSTAPIKALLLRTVDKGAETVVWAASSPELEGSSGKYFGDLKECSCSEASQDAELARKLWEASE 1110
            T +M G+  ++TGAN+GIG+ TA+ALAR GA VVL  R P KG+ A+ DIR+R SGA V  MPLDL S  SIR     F +    LHVL+NNA  ++T + ET +G E T  VNHLG FLLT LLL  ++ SA             +RIVNVAS   +            A G + F        +G  + YG SKL N+ FT EL RRL           G+G VTV+ + PG V TG   +      FS W+  + K          LR+ +KGA+T ++ ASSPEL+G +GKYF D KE   +  +QD E AR+LW ASE
Sbjct:    2 TASMQGKTVLITGANSGIGRETAVALARAGATVVLTSRDPDKGEQAAADIRQR-SGADVALMPLDLASFPSIRAHADDFLQRYDKLHVLINNAGLILTERTETEQGFETTFGVNHLGHFLLTQLLLDRIKASAP------------ARIVNVASAAHR-----------FARGGLDFNDLQLTNSYGGMQAYGRSKLANIYFTRELARRLE----------GSG-VTVNALHPGSVATGFAHDGDVRAPFS-WLWTLAKP--------FLRSPEKGAQTSIFVASSPELDGVTGKYFADSKETQPTSVAQDDEAARRLWTASE 280          
BLAST of mRNA_F-serratus_M_contig1257.1924.1 vs. uniprot
Match: A0A1F8RIH4_9CHLR (Short-chain dehydrogenase n=1 Tax=Chloroflexi bacterium RBG_16_64_32 TaxID=1797658 RepID=A0A1F8RIH4_9CHLR)

HSP 1 Score: 189 bits (479), Expect = 6.650e-54
Identity = 138/313 (44.09%), Postives = 174/313 (55.59%), Query Frame = 1
Query:  172 MAGRVCVVTGANAGIGKATAMALARQGAHVVLACRSPSKGDAASRDIRRRVSGATVQAMPLDLESTESIRGFVKRFRETNLPLHVLVNNAAGMITGKLETVRGMEKTMVVNHLGPFLLTHLLLPNLQKSAARPPENGPQNILASRIVNVASRLEKRGELPAAKDAASATGTVWFQPPPGEHGAFRQYGASKLCNMLFTFELHRRLAATTAPASDSGGAGRVTVSVVTPGMVNTGLGDNMFSPWVRPMIKLSTAPIKALLLRTVDKGAETVVWAASSPELEGSSGKYFGDLKECSCSEASQDAELARKLWEASE 1110
            M G+  ++TG N+GIGK TA+ALAR GA VV   R P KG+ A+ DIRRR SGA V  M LDL S  SIR F   F E    LHVLVNNA  +++ + ET  G E T  VNHLG FLLT LLL  ++ SA             +RIVNV+SR        A + A +       Q   G +G  R YG +KL N+ FT EL RRL           GAG VTV+ + PG V TG   +         + L   P     LR+ +KGAET ++ AS+PE++G SG+YF D KE   +  +QD + AR+LWEASE
Sbjct:    1 MQGKTVLITGGNSGIGKETAVALARLGATVVFTSRDPVKGEQAAADIRRR-SGADVALMALDLASFASIRAFAAAFLERYDRLHVLVNNAGLILSERTETEEGFETTFGVNHLGHFLLTGLLLDRIKASAP------------ARIVNVSSR--------AHRFARNGLDFDDLQSTKG-YGGLRAYGRAKLANIYFTRELARRLE----------GAG-VTVNALHPGSVATGFAGHGDVRAPFSWLYLLVRPF----LRSPEKGAETSIYLASAPEVDGVSGRYFADSKETEPTRIAQDDDAARRLWEASE 276          
BLAST of mRNA_F-serratus_M_contig1257.1924.1 vs. uniprot
Match: A0A0F8W744_LOKSG (Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase n=5 Tax=root TaxID=1 RepID=A0A0F8W744_LOKSG)

HSP 1 Score: 188 bits (477), Expect = 1.180e-53
Identity = 124/318 (38.99%), Postives = 174/318 (54.72%), Query Frame = 1
Query:  172 MAGRVCVVTGANAGIGKATAMALARQGAHVVLACRSPSKGDAASRDIRRRVSGATVQAMPLDLESTESIRGFVKRFRETNLPLHVLVNNAAGMITGKLETVRGMEKTMVVNHLGPFLLTHLLLPNLQKSAARPPENGPQNILASRIVNVASRLEKRGELPAAKDAASATGTVWFQPPPGEHGAFRQYGASKLCNMLFTFELHRRLAATTAPASDSGGAGRVTVSVVTPGMVNTGLGDNMFSPWVRPMIKLSTAPIKALLLRTVDKGAETVVWAASSPELEGSSGKYFGDLKECSCSEASQDAELARKLWEASEVATGL 1125
            M G+ C++TGAN+GIGKATA+ LA++GA +++ CR   +G+ A ++I    +   V+    DL S E IR FV  F+     LHVL+NNA  MI+ ++ +  G+E    VNHL PFLLT+LLL  L+KSA             SRI+NV+S L KRG++               Q    +   F+ YG SKL  ML+++EL RRL  T            VT++ V PG+VN+ LG        R   K S    K L  +  +KGAET ++ ASSPE+EG +GKYF        S+ S + E A+++W+ S   TGL
Sbjct:    3 MQGKNCLITGANSGIGKATAIGLAKEGATIIMVCRDKERGEKAKKEIIELTNNKNVEVFLCDLSSQEDIRKFVSEFKGKYQTLHVLINNAGVMISKRIISDEGLEMNFAVNHLAPFLLTNLLLDILKKSAP------------SRIINVSSGLHKRGKIDFED----------LQNENKKTALFKMYGDSKLALMLWSYELSRRLEGTN-----------VTINTVHPGVVNSNLG--------RHQSKFSQGFGK-LFFKKPEKGAETSIYLASSPEVEGITGKYFVKKVPRQSSKESYNEEYAKRIWDISAKMTGL 278          
BLAST of mRNA_F-serratus_M_contig1257.1924.1 vs. uniprot
Match: UPI000FD74E8A (SDR family oxidoreductase n=1 Tax=Paenibacillus kobensis TaxID=59841 RepID=UPI000FD74E8A)

HSP 1 Score: 188 bits (477), Expect = 1.440e-53
Identity = 133/319 (41.69%), Postives = 175/319 (54.86%), Query Frame = 1
Query:  172 MAGRVCVVTGANAGIGKATAMALARQGAHVVLACRSPSKGDAASRDIRRRVSGATVQAMPLDLESTESIRGFVKRFRETNLPLHVLVNNAAGMITGKLETVRGMEKTMVVNHLGPFLLTHLLLPNLQKSAARPPENGPQNILASRIVNVASRLEKRGELPAAKDAASATGTVWFQPPPGEHGAFRQYGASKLCNMLFTFELHRRLAATTAPASDSGGAGRVTVSVVTPGMVNTGLGDNMFSPWVRPMIKLSTAPIKALLLRTVDKGAETVVWAASSPELEGSSGKYFGDLKECSCSEASQDAELARKLWEASEVATGLN 1128
            M GR  ++TGANAGIGKATA ALA+QGA ++LACR  +KG+AA+ +I R      ++ +PLDL S  SIR F  R       L VLVNNA  M+     T  G+E  M VNH G FLLT LLL  L+ S+ R           SRIV V+S   +  +L   K          + P        R YG SKL N+LFT+EL RRL  T            VT + + PG+V T      F+  +  + KLS A +K  ++  V+KGA T ++ ASSPE+EG +GKYF   +E   S+ S+D  LA++LWE SE  TG +
Sbjct:    5 MTGRRVLLTGANAGIGKATAEALAKQGAALILACRDTAKGEAAANEITRSTGNERIEVLPLDLASFASIRAFADRVNRNYDKLDVLVNNAGIMMDEWTPTADGLETIMGVNHFGTFLLTGLLLDQLKASSGR-----------SRIVTVSSMAHRMYKLNVDKLNEQRR----YMPN-------RAYGLSKLANILFTYELARRLNGTD-----------VTANCLHPGIVRTS-----FAKRLTGLEKLSFAALKPFMI-PVEKGAATSIYLASSPEVEGVTGKYFIRCQEAPSSKQSRDLALAQRLWEESEQVTGYS 284          
BLAST of mRNA_F-serratus_M_contig1257.1924.1 vs. uniprot
Match: A0A537DXZ9_9ARCH (SDR family oxidoreductase n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A537DXZ9_9ARCH)

HSP 1 Score: 186 bits (472), Expect = 7.950e-53
Identity = 123/318 (38.68%), Postives = 170/318 (53.46%), Query Frame = 1
Query:  172 MAGRVCVVTGANAGIGKATAMALARQGAHVVLACRSPSKGDAASRDIRRRVSGATVQAMPLDLESTESIRGFVKRFRETNLPLHVLVNNAAGMITGKLETVRGMEKTMVVNHLGPFLLTHLLLPNLQKSAARPPENGPQNILASRIVNVASRLEKRGELPAAKDAASATGTVWFQPPPGE--HGAFRQYGASKLCNMLFTFELHRRLAATTAPASDSGGAGRVTVSVVTPGMVNTGLGDNMFSPWVRPMIKLSTAPIKALLLRTVDKGAETVVWAASSPELEGSSGKYFGDLKECSCSEASQDAELARKLWEASEVAT 1119
            M G VC+VTG N+GIGKATA+ LA+ GA VV+  R  +KG+A+  +IR +     V+ M  DL S +S+R   + F      LHVLVNNA   +  ++ TV G+E T   NHLG FLLT LL+  L+ +A             SRI+NV S +  R +             + F+   GE  +G FR YG SKL N+LFT+EL RRL  T            VT + + PG+V TG G ++F       +      I+A  + +  K A+  +W AS+PEL+  +GK+F   KE   S+ S D E A++LWE SE  T
Sbjct:    1 MNGTVCLVTGGNSGIGKATAIGLAKLGATVVIVSRDRAKGEASLAEIRSKSGNQNVELMLADLSSLQSVRDLARDFAVKYRQLHVLVNNAGIFLPKRIRTVDGLEATFATNHLGHFLLTMLLIDTLKSNAP------------SRIINVTSSVHYRSK-------------INFEDLQGEKKYGGFRAYGQSKLANVLFTYELARRLEGTG-----------VTANALHPGVVRTGFGTDVFG------VMAVALRIQAPFVMSAAKAAKAAIWLASAPELQTVTGKFFSKGKEKRSSKESYDVEAAQRLWEISEELT 276          
BLAST of mRNA_F-serratus_M_contig1257.1924.1 vs. uniprot
Match: A0A2V8T3W8_9BACT (Short-chain dehydrogenase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8T3W8_9BACT)

HSP 1 Score: 185 bits (469), Expect = 1.820e-52
Identity = 130/322 (40.37%), Postives = 175/322 (54.35%), Query Frame = 1
Query:  172 MAGRVCVVTGANAGIGKATAMALARQGAHVVLACRSPSKGDAASRDIRRRVSGATVQAMPLDLESTESIRGFVKRFRETNLPLHVLVNNAAGMITGKLETVRGMEKTMVVNHLGPFLLTHLLLPNLQKSAARPPENGPQNILASRIVNVASRLEKRGELPAAKDAASATGTVWFQPPPGEHGAFRQYGASKLCNMLFTFELHRRLAATTAPASDSGGAGRVTVSVVTPGMVNTGLGDNMFSP---WVRPMIKLSTAPIKALLLRTVDKGAETVVWAASSPELEGSSGKYFGDLKECSCSEASQDAELARKLWEASEVATGLN 1128
            M G+VCVVTGANAGIG  TA  LA  GA VV+ CR   +G+AA R+I++      V+ M  DL S  S+R F   F++ +  L VLVNNA  ++  +     G+E T  VNHLG FL+T+LLL  L+KS+             SRIVNV+S   K G+L      A             ++ AF  Y  SKL N+LFT+EL RRL  T            VT + + PG    G+G N+F     +++ +IKL T           ++GA T ++ ASSPE+EG +GKYF   ++   SE S++ E AR+LWE SE  TGLN
Sbjct:    1 MTGKVCVVTGANAGIGLETARGLAEMGATVVMVCRDRERGEAAQREIKQSTGNDAVELMVCDLASQASMRQFAADFKQRHDRLDVLVNNAGVLLRERSLNEDGIESTFAVNHLGYFLVTNLLLDVLKKSSP------------SRIVNVSSTAHKYGKLDIGGWVAGR-----------DYSAFGAYSNSKLANVLFTYELARRLQGTG-----------VTANCLHPG----GVGTNLFRGLPGFLQTLIKLVTIG--------PERGARTSIYLASSPEVEGITGKYFVRRRQQKSSETSRNEEAARRLWEVSEELTGLN 276          
BLAST of mRNA_F-serratus_M_contig1257.1924.1 vs. uniprot
Match: A0A3M2ACC3_9CHLR (SDR family oxidoreductase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M2ACC3_9CHLR)

HSP 1 Score: 185 bits (470), Expect = 2.090e-52
Identity = 132/320 (41.25%), Postives = 174/320 (54.37%), Query Frame = 1
Query:  172 MAGRVCVVTGANAGIGKATAMALARQGAHVVLACRSPSKGDAASRDIRRRVSGATVQAMPLDLESTESIRGFVKRFRETNLPLHVLVNNAAGMITGKLETVRGMEKTMVVNHLGPFLLTHLLLPNLQKSAARPPENGPQNILASRIVNVASRLEKRGELPAAKDAASATGTVWFQPPPGE--HGAFRQYGASKLCNMLFTFELHRRLAATTAPASDSGGAGRVTVSVVTPGMVNTGLGDNMFSPWVRPMIKLSTAPIKALLLRTVDKGAETVVWAASSPELEGSSGKYFGDLKECSCSEASQDAELARKLWEASEVATGL 1125
            M G++C+VTGANAGIGK TA+ LA+ GA VVL CR+ ++G+AA  +IR+      V  +  DL S +SI    K F+E    LHVLVNNA      +  +V G+E T  +NHLG FLLTHLLL  L  SA             SRIVNV+S              A   G + F+    E  +  F  Y  SKL N+LFT+EL RRL        ++ G   VTV+ + PG V +  G N        + K++   ++ + +  V KGAET V+ ASSPE+EG +GKYF   K    S  S D E+AR+LWE SE  TG+
Sbjct:    4 MKGKICMVTGANAGIGKQTALELAKMGATVVLVCRNRARGEAAQAEIRQVSGNDQVDLLLADLSSQQSIHELAKTFKEKYDRLHVLVNNAGAWFQNRQLSVDGIEMTFALNHLGYFLLTHLLLDVLVVSAP------------SRIVNVSS-------------GAHHNGRIHFEDLQFEKRYRGFAAYSQSKLANILFTYELARRL--------EAHGIQGVTVNCLHPGFVASNFGRNNGL-----LAKVALTFLRPIAV-DVRKGAETSVYLASSPEVEGVTGKYFDKKKAVRSSAISYDEEVARRLWEISEEMTGV 284          
BLAST of mRNA_F-serratus_M_contig1257.1924.1 vs. uniprot
Match: UPI001F036D3E (retinol dehydrogenase 14-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F036D3E)

HSP 1 Score: 186 bits (471), Expect = 2.320e-52
Identity = 135/343 (39.36%), Postives = 182/343 (53.06%), Query Frame = 1
Query:  109 AGTIGAWVWWRNR----QPLSTTGAMAGRVCVVTGANAGIGKATAMALARQGAHVVLACRSPSKGDAASRDIRRRVSGATVQAMPLDLESTESIRGFVKRFRETNLPLHVLVNNAAGMITGKLETVRGMEKTMVVNHLGPFLLTHLLLPNLQKSAARPPENGPQNILASRIVNVASRLEKRGELPAAKDAASATGTVWFQPPPGEHGAFRQYGASKLCNMLFTFELHRRLAATTAPASDSGGAGRVTVSVVTPGMVNTGLGDNMFSPWVRPMIKLSTAPIKALLLRTVDKGAETVVWAASSPELEGSSGKYFGDLKECSCSEASQDAELARKLWEASEVATGL 1125
            AG  G  VW   R    +      ++ G+  ++TG N GIGKATA+ALAR+GA ++LACRS  +GD A+ +IR RV  A V    LDL S +SI+ F K F +T   LH+L+NNA    T   ++  G E    VNHLG FLLT+LL+  L KS  +P          SRI+ V+S L K G +    D     G   + P        R Y  SKL N+LF  EL R       P         VTV+ V PG+V T L    ++ +   + K    P+  L+L+T  +GA+T ++ A+ P LEG SG YFGD K+  C+  ++D   A+KLWE SE  TGL
Sbjct:    7 AGACGTLVWLFRRYFGGKICQNDVSLCGKTALITGGNTGIGKATALALARKGAKIILACRSLQRGDKAADEIRHRVRNANVCVFFLDLSSLKSIKQFAKDFTKTGNTLHILINNAGIYGTPHWKSEDGFELQFAVNHLGHFLLTNLLMDTLAKS--KP----------SRIIIVSSSLHKYGSI----DFEDLNGDKNYNPR-------RAYAQSKLANLLFAHELKR------LPQG-------VTVNTVHPGIVFTELA--RYTTFYT-LFKYLAYPLLLLILKTPWQGAQTSIYCATEPTLEGVSGMYFGDCKKNDCAPHARDDGKAKKLWEISEKMTGL 310          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1257.1924.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMA9_ECTSI1.770e-13359.49Dehydrogenase/reductase SDR family member 13 n=2 T... [more]
A0A085WVZ3_9DELT7.840e-5541.54Retinol dehydrogenase 13 n=2 Tax=Hyalangium minutu... [more]
A0A0F9HXV3_9ZZZZ1.900e-5443.03Uncharacterized protein n=1 Tax=marine sediment me... [more]
A0A1F8RIH4_9CHLR6.650e-5444.09Short-chain dehydrogenase n=1 Tax=Chloroflexi bact... [more]
A0A0F8W744_LOKSG1.180e-5338.99Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-... [more]
UPI000FD74E8A1.440e-5341.69SDR family oxidoreductase n=1 Tax=Paenibacillus ko... [more]
A0A537DXZ9_9ARCH7.950e-5338.68SDR family oxidoreductase n=1 Tax=Candidatus Bathy... [more]
A0A2V8T3W8_9BACT1.820e-5240.37Short-chain dehydrogenase n=1 Tax=Acidobacteria ba... [more]
A0A3M2ACC3_9CHLR2.090e-5241.25SDR family oxidoreductase n=1 Tax=Chloroflexi bact... [more]
UPI001F036D3E2.320e-5239.36retinol dehydrogenase 14-like n=1 Tax=Xenia sp. Ca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1257contigF-serratus_M_contig1257:215445..218099 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score397.5
Seed ortholog evalue7e-108
Seed eggNOG ortholog2880.D7FMA9
KEGG rclassRC00649
KEGG koko:K11153,ko:K11162
KEGG ReactionR08379,R08383
KEGG Pathwayko00830,ko01100,map00830,map01100
Hectar predicted targeting categoryother localisation
EggNOG free text desc.oxidation-reduction process
EggNOG OGsCOG1028@1,KOG1208@2759
Ec32 ortholog descriptionShort-chain dehydrogenase/reductase SDR
Ec32 orthologEc-17_003630.1
EC1.1.1.300
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons4
Model size1151
Cds size1149
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1257.1924.1prot_F-serratus_M_contig1257.1924.1Fucus serratus malepolypeptideF-serratus_M_contig1257 215445..218099 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929182.8591025-CDS-F-serratus_M_contig1257:215444..2155901622929182.8591025-CDS-F-serratus_M_contig1257:215444..215590Fucus serratus maleCDSF-serratus_M_contig1257 215445..215590 +
1690962740.9805522-CDS-F-serratus_M_contig1257:215444..2155901690962740.9805522-CDS-F-serratus_M_contig1257:215444..215590Fucus serratus maleCDSF-serratus_M_contig1257 215445..215590 +
1622929182.8710153-CDS-F-serratus_M_contig1257:216229..2163711622929182.8710153-CDS-F-serratus_M_contig1257:216229..216371Fucus serratus maleCDSF-serratus_M_contig1257 216230..216371 +
1690962740.9998484-CDS-F-serratus_M_contig1257:216229..2163711690962740.9998484-CDS-F-serratus_M_contig1257:216229..216371Fucus serratus maleCDSF-serratus_M_contig1257 216230..216371 +
1622929182.8801708-CDS-F-serratus_M_contig1257:216738..2168921622929182.8801708-CDS-F-serratus_M_contig1257:216738..216892Fucus serratus maleCDSF-serratus_M_contig1257 216739..216892 +
1690962741.010305-CDS-F-serratus_M_contig1257:216738..2168921690962741.010305-CDS-F-serratus_M_contig1257:216738..216892Fucus serratus maleCDSF-serratus_M_contig1257 216739..216892 +
1622929182.89078-CDS-F-serratus_M_contig1257:217392..2180991622929182.89078-CDS-F-serratus_M_contig1257:217392..218099Fucus serratus maleCDSF-serratus_M_contig1257 217393..218099 +
1690962741.0198624-CDS-F-serratus_M_contig1257:217392..2180991690962741.0198624-CDS-F-serratus_M_contig1257:217392..218099Fucus serratus maleCDSF-serratus_M_contig1257 217393..218099 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1257.1924.1

>prot_F-serratus_M_contig1257.1924.1 ID=prot_F-serratus_M_contig1257.1924.1|Name=mRNA_F-serratus_M_contig1257.1924.1|organism=Fucus serratus male|type=polypeptide|length=383bp
LFDPHGSFDTQARHMSEESRAGLFGGFISPWLLAAGAGTIGAWVWWRNRQ
PLSTTGAMAGRVCVVTGANAGIGKATAMALARQGAHVVLACRSPSKGDAA
SRDIRRRVSGATVQAMPLDLESTESIRGFVKRFRETNLPLHVLVNNAAGM
ITGKLETVRGMEKTMVVNHLGPFLLTHLLLPNLQKSAARPPENGPQNILA
SRIVNVASRLEKRGELPAAKDAASATGTVWFQPPPGEHGAFRQYGASKLC
NMLFTFELHRRLAATTAPASDSGGAGRVTVSVVTPGMVNTGLGDNMFSPW
VRPMIKLSTAPIKALLLRTVDKGAETVVWAASSPELEGSSGKYFGDLKEC
SCSEASQDAELARKLWEASEVATGLNESERVV*
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mRNA from alignment at F-serratus_M_contig1257:215445..218099+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1257.1924.1 ID=mRNA_F-serratus_M_contig1257.1924.1|Name=mRNA_F-serratus_M_contig1257.1924.1|organism=Fucus serratus male|type=mRNA|length=2655bp|location=Sequence derived from alignment at F-serratus_M_contig1257:215445..218099+ (Fucus serratus male)
CTTTTCGATCCGCACGGTTCATTTGATACACAAGCGCGTCACATGTCCGA AGAAAGTCGGGCTGGTCTTTTTGGAGGATTTATATCTCCCTGGCTTCTGG CTGCTGGAGCGGGCACGATCGGCGCTTGGGTGTGGTGGCGCAACAGGTGC GAGCCTATTTTCTCTCAACAAGTTCAAAGTTGACAGTCTCGCCTCAGTAT ACTGCCGAGACTTCGCAAAAATTTTGGTCTCGCGAGGCAGGTTTGGCTGT CCTGTCCAGTGTCAGACCGTTTATTTTCCACATCCAGGCTGAATCTAGCG CTCTCTTCTCCTGACTCTCGCTTTTTGCGACAGTGTCAGCTGTTTTCCTT GGACTACAGTAGGAAACATATCTGTGCTGCACAGATCTTGACATAATATG GTAGATAAGACACGTGCTATACGTACCACAGGCGATAGCGCTGTAGTCTA TTAATAGTCGATCTGATCCGAGAGGGTAAGTTGTCCCAAATGGTGTGTTT TTGTCGGAAGACATTCGAAGTCGAGAGCAAGCCCAGTCTCGCCCAGATAT AGCCGGTTAGGAATAGCCCCGGATATGCGAAATAAGTCAACATATACAGC AGTATTCGTCGTCCTTCTGCAATCCAACATCCACCACTTACTGTATGATA GCTCTAACCATCTACAGTTAGTCTGCTGTTTCCGTTGCCTCTATCTTTAC GCATATGCTACGAAGTGAATTTCCACTACAGTATAACAACTCGACTGCCG GCCGATGCGCTCGCTCGATTATACCACGGGGGCAGGCAACCTCTTTCAAC GACGGGCGCTATGGCGGGAAGGGTATGTGTGGTGACCGGGGCTAACGCGG GAATCGGCAAGGCTACCGCCATGGCGCTTGCGCGGCAGGGGGCACACGTC GTTCTAGCCTGTAGATCTCCGAGTAAGGTACGCGTACTTGTAACGCAGAA GAAACATCAGTGACATCGGCAGCAGCAGTATCGCTAACATCGAACGTACC ACAAGCGAAATCAGAGTGGTGTCGGCGTCCGCTGTTGTGGCGTCGGCGGT AACGTCTGGACATGAACTGCTATGAATGCCTATGTGGTCAGCTGAACAGG GAAAAATAGTTTTCCCCGTCTCCGTTTCTTCCTCAGAATTTGGTCTCGCG AGACGGGTTCGGTCGTCCCGTCCCGCGTCAGGCCGCTTATTCTCCAACCC CAGGATAAAAATCACACAAGTTAATGTCCCTAGAGCTCGAAATTGCAATT CCTAACATAATATTCTACCCGCGTCAATCACATTTTGGTCTCAGGGCGAT GCTGCAAGCAGAGACATCCGCCGCAGGGTATCGGGTGCGACCGTGCAGGC CATGCCGCTCGACTTGGAGAGCACCGAGAGCATCCGCGGCTTCGTGAAAC GCTTCAGGGAGACCAACCTTCCGCTTCATGTTCTCGTTAATAACGCCGGT GGGTTTAGATACGGCTAACTGCTGTACCAGTCTCTGATCGCTCGCGACCC TTCTTATTTCCACGCGTTCTGTTCGAAGATATCATTTTCTCCATCGCGAG TTCTATCCGCCGAGTGGAGCGCCAGGGAGTGGCTCGGTTACGCTTAAGTG TTTTGTTTTCGAATGAACGTTGCAAGCAATACCGACCTGCTCTGATGCTG TTCAAACGATCTCTCGATTTTCACCTGCCGCCCCTGTAGATCTGAGGGTC GCGAAAGCGGGTTGCCGCTCTCTCCGCCGCCATTAGCTAGAAGCAGAATT TCTGCTCCCCGGGTCTAACATTATGCGCCTTAAAACCCGGTGGGGAAACA CGTGTACAGTATTTACGTTCAGGACTTTTGGAAGCTGCTATCTGCAGAAA CGCGCCTCATGCCGAGGCCATAACCGCGCATCCTCTTCGCCCCGTATGGT CGTACGAGTTTTTTTCATCATGACTGTGTTCCACGAACTGCCGCAAAGCA GGGATGATAACGGGGAAACTCGAGACAGTTCGCGGGATGGAGAAGACGAT GGTGGTTAATCATCTGGGTCCTTTCCTCCTGACACATCTGCTGCTGCCCA ACCTGCAGAAGAGCGCTGCCCGTCCTCCCGAGAACGGTCCGCAGAACATC CTCGCGTCGCGTATCGTCAACGTGGCTTCTAGGCTGGAGAAGCGGGGCGA ACTCCCGGCGGCGAAGGATGCCGCATCAGCAACCGGCACGGTGTGGTTCC AGCCCCCTCCAGGAGAGCACGGTGCGTTCCGACAGTACGGGGCATCCAAG TTGTGCAACATGCTGTTCACCTTCGAGTTGCACCGACGCCTTGCTGCTAC CACAGCTCCAGCCTCCGACAGTGGGGGCGCAGGACGCGTCACGGTCAGCG TGGTTACGCCCGGGATGGTGAACACTGGTCTTGGTGACAATATGTTCAGC CCGTGGGTCAGGCCTATGATCAAGCTGTCGACTGCACCGATAAAAGCTCT TCTACTGAGAACGGTGGACAAGGGTGCGGAAACGGTGGTCTGGGCGGCCA GCTCCCCGGAGCTGGAGGGTTCCAGCGGAAAGTATTTTGGCGACCTGAAA GAGTGTTCTTGCAGCGAAGCATCTCAGGATGCTGAGCTCGCAAGAAAGTT GTGGGAGGCCTCGGAGGTGGCGACGGGGTTGAACGAGAGCGAACGCGTGG TGTGA
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Coding sequence (CDS) from alignment at F-serratus_M_contig1257:215445..218099+

>mRNA_F-serratus_M_contig1257.1924.1 ID=mRNA_F-serratus_M_contig1257.1924.1|Name=mRNA_F-serratus_M_contig1257.1924.1|organism=Fucus serratus male|type=CDS|length=2298bp|location=Sequence derived from alignment at F-serratus_M_contig1257:215445..218099+ (Fucus serratus male)
CTTTTCGATCCGCACGGTTCATTTGATACACAAGCGCGTCACATGTCCGA
AGAAAGTCGGGCTGGTCTTTTTGGAGGATTTATATCTCCCTGGCTTCTGG
CTGCTGGAGCGGGCACGATCGGCGCTTGGGTGTGGTGGCGCAACAGCTTT
TCGATCCGCACGGTTCATTTGATACACAAGCGCGTCACATGTCCGAAGAA
AGTCGGGCTGGTCTTTTTGGAGGATTTATATCTCCCTGGCTTCTGGCTGC
TGGAGCGGGCACGATCGGCGCTTGGGTGTGGTGGCGCAACAGGCAACCTC
TTTCAACGACGGGCGCTATGGCGGGAAGGGTATGTGTGGTGACCGGGGCT
AACGCGGGAATCGGCAAGGCTACCGCCATGGCGCTTGCGCGGCAGGGGGC
ACACGTCGTTCTAGCCTGTAGATCTCCGAGTAAGGCAACCTCTTTCAACG
ACGGGCGCTATGGCGGGAAGGGTATGTGTGGTGACCGGGGCTAACGCGGG
AATCGGCAAGGCTACCGCCATGGCGCTTGCGCGGCAGGGGGCACACGTCG
TTCTAGCCTGTAGATCTCCGAGTAAGGGCGATGCTGCAAGCAGAGACATC
CGCCGCAGGGTATCGGGTGCGACCGTGCAGGCCATGCCGCTCGACTTGGA
GAGCACCGAGAGCATCCGCGGCTTCGTGAAACGCTTCAGGGAGACCAACC
TTCCGCTTCATGTTCTCGTTAATAACGCCGGGCGATGCTGCAAGCAGAGA
CATCCGCCGCAGGGTATCGGGTGCGACCGTGCAGGCCATGCCGCTCGACT
TGGAGAGCACCGAGAGCATCCGCGGCTTCGTGAAACGCTTCAGGGAGACC
AACCTTCCGCTTCATGTTCTCGTTAATAACGCCGCAGGGATGATAACGGG
GAAACTCGAGACAGTTCGCGGGATGGAGAAGACGATGGTGGTTAATCATC
TGGGTCCTTTCCTCCTGACACATCTGCTGCTGCCCAACCTGCAGAAGAGC
GCTGCCCGTCCTCCCGAGAACGGTCCGCAGAACATCCTCGCGTCGCGTAT
CGTCAACGTGGCTTCTAGGCTGGAGAAGCGGGGCGAACTCCCGGCGGCGA
AGGATGCCGCATCAGCAACCGGCACGGTGTGGTTCCAGCCCCCTCCAGGA
GAGCACGGTGCGTTCCGACAGTACGGGGCATCCAAGTTGTGCAACATGCT
GTTCACCTTCGAGTTGCACCGACGCCTTGCTGCTACCACAGCTCCAGCCT
CCGACAGTGGGGGCGCAGGACGCGTCACGGTCAGCGTGGTTACGCCCGGG
ATGGTGAACACTGGTCTTGGTGACAATATGTTCAGCCCGTGGGTCAGGCC
TATGATCAAGCTGTCGACTGCACCGATAAAAGCTCTTCTACTGAGAACGG
TGGACAAGGGTGCGGAAACGGTGGTCTGGGCGGCCAGCTCCCCGGAGCTG
GAGGGTTCCAGCGGAAAGTATTTTGGCGACCTGAAAGAGTGTTCTTGCAG
CGAAGCATCTCAGGATGCTGAGCTCGCAAGAAAGTTGTGGGAGGCCTCGG
AGGTGGCGACGGGGTTGAACGAGAGCGAACGCGTGGTGTGACAGGGATGA
TAACGGGGAAACTCGAGACAGTTCGCGGGATGGAGAAGACGATGGTGGTT
AATCATCTGGGTCCTTTCCTCCTGACACATCTGCTGCTGCCCAACCTGCA
GAAGAGCGCTGCCCGTCCTCCCGAGAACGGTCCGCAGAACATCCTCGCGT
CGCGTATCGTCAACGTGGCTTCTAGGCTGGAGAAGCGGGGCGAACTCCCG
GCGGCGAAGGATGCCGCATCAGCAACCGGCACGGTGTGGTTCCAGCCCCC
TCCAGGAGAGCACGGTGCGTTCCGACAGTACGGGGCATCCAAGTTGTGCA
ACATGCTGTTCACCTTCGAGTTGCACCGACGCCTTGCTGCTACCACAGCT
CCAGCCTCCGACAGTGGGGGCGCAGGACGCGTCACGGTCAGCGTGGTTAC
GCCCGGGATGGTGAACACTGGTCTTGGTGACAATATGTTCAGCCCGTGGG
TCAGGCCTATGATCAAGCTGTCGACTGCACCGATAAAAGCTCTTCTACTG
AGAACGGTGGACAAGGGTGCGGAAACGGTGGTCTGGGCGGCCAGCTCCCC
GGAGCTGGAGGGTTCCAGCGGAAAGTATTTTGGCGACCTGAAAGAGTGTT
CTTGCAGCGAAGCATCTCAGGATGCTGAGCTCGCAAGAAAGTTGTGGGAG
GCCTCGGAGGTGGCGACGGGGTTGAACGAGAGCGAACGCGTGGTGTGA
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