mRNA_F-serratus_M_contig124.1832.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig124.1832.1 vs. uniprot
Match: D7FJU6_ECTSI (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU6_ECTSI) HSP 1 Score: 280 bits (716), Expect = 2.930e-87 Identity = 136/183 (74.32%), Postives = 156/183 (85.25%), Query Frame = 1
Query: 1 KWVKGNALSPYIYRAELLKSDTVVSWVGGFGKTDVYMELVNGEANIKLAEAAADAGVKQFVFLSVHDYKAPAFVKRVGYFQGKRETEKVIGELFGAKAGSFKPAFVYGDRKLKVAGPNGKERTVNLPLQRLGAPLARLTSTELGRRIAGSRLSLADLAWTQPLSTEAVAKTAVRCCLDGVDKL 549
KWV+GNAL+ +YRAEL +SDTVVS VGGFGKTD YM LVNGE NIKLAEAAADAGVKQFVF+SVHDYKAP+ VK+VGYF GKR EK+IGELFGAK KPAF+YG R +K+ GP GKERTVN+PLQR+G PLA++TST +G+RIAGS L LAD+AWTQPLST VAK+AVRCCL+G D L
Sbjct: 98 KWVEGNALNQDLYRAELRRSDTVVSCVGGFGKTDAYMGLVNGETNIKLAEAAADAGVKQFVFVSVHDYKAPSAVKKVGYFDGKRRAEKLIGELFGAKGVILKPAFIYGSRDVKLTGPKGKERTVNIPLQRVGGPLAKITSTGIGKRIAGSGLPLADVAWTQPLSTAEVAKSAVRCCLEGTDSL 280
BLAST of mRNA_F-serratus_M_contig124.1832.1 vs. uniprot
Match: A0A6H5L1C5_9PHAE (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1C5_9PHAE) HSP 1 Score: 273 bits (697), Expect = 1.230e-83 Identity = 135/186 (72.58%), Postives = 155/186 (83.33%), Query Frame = 1
Query: 1 KWVKGNALSPYIYRAELLKSDTVVSWVGGFGKTDVYMELVNGEANIKLAEAAADAGVKQFVFLSVHDYKAPAFVKRVGYFQGKRETEKVIGELFGAKAGSFKPAFVYGDRKLKVAGPNGKERTVNLPLQRLGAPLARLTSTELGRRIAG---SRLSLADLAWTQPLSTEAVAKTAVRCCLDGVDKL 549
KWV+GNAL+ +YRAEL +SDTVVS VGGFGKTD YM LVNGE NIKLAEAAADAGVKQFVF+SVHDYKAP+ VK+VGYF GKR EK+IGELFGAK KPAF+YG R +K+ GP GKERTVN+PLQR+G PLA++TST +G+RIA S L LAD+AWTQPLST VAK+AVRCCL+G D L
Sbjct: 152 KWVEGNALNQDLYRAELRRSDTVVSCVGGFGKTDAYMGLVNGETNIKLAEAAADAGVKQFVFVSVHDYKAPSVVKKVGYFDGKRRAEKLIGELFGAKGVILKPAFIYGSRDVKLTGPKGKERTVNIPLQRVGGPLAKITSTGIGKRIASESRSGLPLADVAWTQPLSTAEVAKSAVRCCLEGTDSL 337
BLAST of mRNA_F-serratus_M_contig124.1832.1 vs. uniprot
Match: A0A835ZDA8_9STRA (NAD(P)-bd_dom domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDA8_9STRA) HSP 1 Score: 170 bits (431), Expect = 4.210e-45 Identity = 87/175 (49.71%), Postives = 115/175 (65.71%), Query Frame = 1
Query: 4 WVKGNALSPYIYRAELLKSDTVVSWVGGFGKTDVYMELVNGEANIKLAEAAADAGVKQFVFLSVHDYKAPAFVKRVGYFQGKRETEKVIGELFGAKAGSFKPAFVYGDRKLKVAGPNGKER-TVNLPLQRLGAPLARLTSTELGRRIAGSRLSLADLAWTQPLSTEAVAKTAVRC 525
W+ +AL Y++ L D+VVS +GGFG TD Y+ LVNG+ IKL EAA +AGV +FVF+SVH+YK P V R GYF GKR E IGEL+GA +PAF+YG +K+ P E+ TV LPL+++G P A++T+ +R+A S L LAD +TQPLS + VA A RC
Sbjct: 107 WIAASALDVDSYKSALEGCDSVVSCIGGFGATDSYLNLVNGDCTIKLCEAAKEAGVPRFVFVSVHEYKLPTAVARTGYFAGKRRAEARIGELYGADGYVLRPAFIYGQKKVTFTNPFSYEKKTVTLPLEKIGEPAAKITAMNPIKRLANSGLPLADTVYTQPLSVDEVAFAASRC 281
BLAST of mRNA_F-serratus_M_contig124.1832.1 vs. uniprot
Match: A0A388KGE5_CHABU (NAD(P)-bd_dom domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KGE5_CHABU) HSP 1 Score: 109 bits (273), Expect = 5.190e-22 Identity = 67/177 (37.85%), Postives = 97/177 (54.80%), Query Frame = 1
Query: 4 WVKGNALSPYIYRAELLKSDTVVSWVGGFGKTDVYMELVNGEANIKLAEAAADAGVKQFVFLSVHDYKAPAFVKRVGYFQGKRETEKVIGELFGAKAGSFKPAFVYGDRKLKVAGPNGKERTVNLPLQRLGAPLARLTSTELGRRIAGSRLSLADLAWTQPLSTEAVAKTAVRCCLD 534
W+KG+ + + L TVVS +GGFG + ME +NGEAN++ AA AGV +F+++SVHDY P+FV+ VGYF GK+ EK + E F A +P F+YG RK+ NG V++ L ++G P +L L +DL P++ E VA AV+ +D
Sbjct: 294 WIKGDVFAAD-WSTLLDGVTTVVSCIGGFGNNE-QMEKINGEANVQAVAAARQAGVGRFIYISVHDYNLPSFVRSVGYFSGKQRAEKAVLESFPATGVILRPGFIYGKRKV-----NG----VDVALDQVGQPFEKLLEGIDNWIKPLKALPASDLLLLPPVNVEDVADAAVKAVID 459
BLAST of mRNA_F-serratus_M_contig124.1832.1 vs. uniprot
Match: A0A7S0WUV3_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WUV3_9CHLO) HSP 1 Score: 99.0 bits (245), Expect = 1.780e-19 Identity = 65/179 (36.31%), Postives = 92/179 (51.40%), Query Frame = 1
Query: 4 WVKGNALSPYIYRAELLKSDTVVSWVGGFGKTDVYMELVNGEANIKLAEAAADAGVKQFVFLSVHDYKAPAFVKRVGYFQGKRETEKVIGELFGAKAGSFKPAFVYGDRKLKVAGPNGKERTVNLPLQRLGAPLARLTSTELGRRIAGSRLSLADLAWTQPLSTEAVAKTAVRCCLDGV 540
WVKG+AL P ++ +L + VVS VG FG ++ YME V G+A + + EAA A VK FVF+S HDY+ P+FV GY GK++ E+ + F S +P F++G R + NG V + L +G PL E + S+ LA + P E VA A + G
Sbjct: 94 WVKGDALEPEEWKDKLAGATGVVSCVGAFG-SNAYMEKVCGDATVSMVEAAKAAKVKNFVFISAHDYQLPSFVLS-GYVAGKKKAEEAVASHFPTSGFSLRPGFIHGTRYV-----NG----VPVFLSTIGGPLETALRGENAMNLLESQPKLATI-MVPPTKVEDVASVAAQAAATGA 260
BLAST of mRNA_F-serratus_M_contig124.1832.1 vs. uniprot
Match: A0A388KKI2_CHABU (NAD(P)-bd_dom domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KKI2_CHABU) HSP 1 Score: 99.4 bits (246), Expect = 1.450e-18 Identity = 59/180 (32.78%), Postives = 91/180 (50.56%), Query Frame = 1
Query: 1 KWVKGNALSPYIYRAELLKSDTVVSWVGGFGKTDVYMELVNGEANIKLAEAAADAGVKQFVFLSVHDYKAPAFVKRVGYFQGKRETEKVIGELFGAKAGSFKPAFVYGDRKLKVAGPNGKERTVNLPLQRLGAPLARLTSTELGRRIAGSRLSLADLAWTQPLSTEAVAKTAVRCCLDGV 540
+WV+G+ P ++R +L + VVS +GGFG D M +NG AN+K +AAA+ VK+FV +S H + PA + R GY++GKR E+ + F +P F++G+R + + +PL +G PL + + S L + P+ AVAK AVR D
Sbjct: 296 EWVRGDVFDPDVWRMQLRDASGVVSCIGGFGTND-EMRRINGHANVKAVQAAAEEDVKRFVLISAHYFSVPAIILR-GYYEGKRIAEEAVRSKFPYGGIILRPGFIHGNRNVG---------NLTVPLSVIGGPLEAVMRSRAFTWT--SNLPIVGSVLLPPVKATAVAKAAVRAATDNA 462
BLAST of mRNA_F-serratus_M_contig124.1832.1 vs. uniprot
Match: A0A1Y1IPQ3_KLENI (NAD(P)-binding Rossmann-fold superfamily protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IPQ3_KLENI) HSP 1 Score: 96.7 bits (239), Expect = 3.750e-18 Identity = 64/185 (34.59%), Postives = 100/185 (54.05%), Query Frame = 1
Query: 1 KWVKGNALSPYIYRAELLKSDTVVSWVGGFGKTDVYMELVNGEANIKLAEAAADAGVKQFVFLSVHDYKAPAFVK-RVGYFQGKRETEKVIGELFGAKAGSFKPAFVYGDRKLKVAGPNGKERTVNLPLQRLGAPLARLTS------TELGRRIAGSRLSLADLAWTQPLSTEAVAKTAVRCCLD 534
+W+ + S + + + V+S +GGFG T+ ME + G+A ++ AEAA +AGV +F+F+SVHDY P+ VK +GYF GK++ E I EL+ +P F+YG R++ A V++PL +GA + + S T+ RI GS + +A P+ E VA+ AV D
Sbjct: 166 QWITADVFSADL-ESYFAGASAVMSCLGGFG-TNEQMERICGDATVRAAEAAKNAGVPRFIFVSVHDYNLPSGVKDSIGYFVGKKKAEARIAELYPGSGVILRPGFIYGSRRVPQAN------NVSIPLTPVGAAVEKSLSILPDALTDALCRIPGSDVLIAP-----PVDVEDVARAAVEAVRD 337
BLAST of mRNA_F-serratus_M_contig124.1832.1 vs. uniprot
Match: A0A7S0MZM9_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MZM9_9CHLO) HSP 1 Score: 95.9 bits (237), Expect = 4.380e-18 Identity = 62/183 (33.88%), Postives = 91/183 (49.73%), Query Frame = 1
Query: 4 WVKGNALSPYIYRAELLKSDTVVSWVGGFGKTDVYMELVNGEANIKLAEAAADAGVKQFVFLSVHDYKAPAFVK-RVGYFQGKRETEKVIGELFGAKAGSFKPAFVYGDRKLKVAGPNGKERTVNLPLQRLGAPLARLTS----TELGRRIAGSR-LSLADLAWTQPLSTEAVAKTAVRCCLD 534
WV + + L + V+S +GGF T ME + G+A I AA AGV +FVF+SVHDY P F+K + GYF GK+ E + F +P F+YG R + G V +PL +G P+ ++ S + LG + L +D+ P+S E+VA TA++C D
Sbjct: 135 WVNADVFDESSWSYTLPGAAAVISCIGGFATTAADMERICGDATIAGVGAAVAAGVPRFVFVSVHDYNIPDFLKDQSGYFSGKKRAEDAVLLQFPEGGAVLRPGFIYGSRLVPQLG-------VTVPLNLVGEPVQKILSLADQSPLGALAEALKPLPASDVLLAPPVSVESVAATALKCISD 310
BLAST of mRNA_F-serratus_M_contig124.1832.1 vs. uniprot
Match: UPI0005399BD3 (uncharacterized protein At1g32220, chloroplastic isoform X1 n=5 Tax=Camelina sativa TaxID=90675 RepID=UPI0005399BD3) HSP 1 Score: 92.4 bits (228), Expect = 2.700e-17 Identity = 64/180 (35.56%), Postives = 96/180 (53.33%), Query Frame = 1
Query: 4 WVKGNALSPYIYRAELLKSDTVVSWVGGFGKTDVYMELVNGEANIKLAEAAADAGVKQFVFLSVHDYKAPAFVKRVGYFQGKRETEKVIGELFGAKAGSFKPAFVYGDRKLKVAGPNGKERTVNLPLQRLGAPLA---RLTSTELGRRIAGSRLSLADLAWTQPLSTEAVAKTAVRCCLD 534
W KG+ LSP + L +V+S VGGFG M +NG ANI AAA+ GVK+FV++S D+ + R GYF+GKR TE I + FG + +P F++G R++ ++ LPL +GAPL +L E+ ++L L P++ ++VA TAV+ +D
Sbjct: 89 WHKGDLLSPDSLKPALEGITSVISCVGGFGSNS-QMVRINGTANINAVNAAAEQGVKRFVYISAADFGVINNLIR-GYFEGKRATEAEILDKFGNRGTILRPGFIHGTRQVG---------SIKLPLSLIGAPLEMVLKLFPKEV------TKLPLIGPLLIPPVNVKSVAGTAVKAAVD 251
BLAST of mRNA_F-serratus_M_contig124.1832.1 vs. uniprot
Match: D8T5V7_SELML (NAD(P)-bd_dom domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T5V7_SELML) HSP 1 Score: 92.4 bits (228), Expect = 3.630e-17 Identity = 57/182 (31.32%), Postives = 92/182 (50.55%), Query Frame = 1
Query: 1 KWVKGNALSPYIYRAELLKSDTVVSWVGGFGKTDVYMELVNGEANIKLAEAAADAGVKQFVFLSVHDYKAPAFVKRVGYFQGKRETEKVIGELFGAKAGSFKPAFVYGDRKLKVAGPNGKERTVNLPLQRLGAPLARLTSTELGRRIAGS--RLSLADLAWTQPLSTEAVAKTAVRCCLDGV 540
+W++GN + P + V+S VGGFG D M +NG+AN+K AAAD+GVK+FV++S D +++ R GYF+GK+ E + F +P F++G R++ ++ LPL +G PL E+ R S R+ + P+ +VAK ++R +D
Sbjct: 104 EWIRGNLIGPNTIGEHMKDVSAVISCVGGFGSNDT-MRKINGDANVKAINAAADSGVKRFVYVSASDLGFASYILR-GYFEGKKAAENAVMSRFPYGGVILRPGFIHGTRRVG---------SIQLPLGVIGTPL------EMAFRNLKSMTRVPVLGNLVVPPVKVTSVAKASIRSAVDNA 268 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig124.1832.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig124.1832.1 >prot_F-serratus_M_contig124.1832.1 ID=prot_F-serratus_M_contig124.1832.1|Name=mRNA_F-serratus_M_contig124.1832.1|organism=Fucus serratus male|type=polypeptide|length=227bp MELVNGEANIKLAEAAADAGVKQFVFLSVHDYKAPAFVKRVGYFQGKRETback to top mRNA from alignment at F-serratus_M_contig124:631786..641540+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig124.1832.1 ID=mRNA_F-serratus_M_contig124.1832.1|Name=mRNA_F-serratus_M_contig124.1832.1|organism=Fucus serratus male|type=mRNA|length=9755bp|location=Sequence derived from alignment at F-serratus_M_contig124:631786..641540+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig124:631786..641540+ >mRNA_F-serratus_M_contig124.1832.1 ID=mRNA_F-serratus_M_contig124.1832.1|Name=mRNA_F-serratus_M_contig124.1832.1|organism=Fucus serratus male|type=CDS|length=1362bp|location=Sequence derived from alignment at F-serratus_M_contig124:631786..641540+ (Fucus serratus male)back to top |