mRNA_F-serratus_M_contig1238.1796.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1238.1796.1 vs. uniprot
Match: A0A6H5L2N4_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2N4_9PHAE) HSP 1 Score: 392 bits (1008), Expect = 2.460e-132 Identity = 187/296 (63.18%), Postives = 234/296 (79.05%), Query Frame = 1
Query: 1 FHDNMPLDELADVAPLTNGGFCVICSCGYRGQRAVLKITRPRGPA----GAAQDLLAEIELYKRITWRGGHANVARAFGSGFHIQQGERAP--FLVLERLEGGTLEKAFDNSVQLNNTWNNPIGRLPVALQLADALVFLHHEAVPGGVIIHRDLKPSNIGLCGQGRVKVIDFGLSVVREVRASSSDTYQMSGMAGTKRFMAPEVCSGLAYNEKVDVYSFGVILWQICTLMKPFAGMNEATHFQQVVLGGLRPPLDPRLPPGLSAVLQSCWHANPNLRPSMPTARQMLRDVFVAGGG 870
F++N+ L EL +V P + GGFCVICSC YRGQ+AVLKI +P + GAAQDLL EI +Y++I+ RGGH N+ARAFG+G H+QQGE +P FL+LERL+GGTLE AF+ S + W++PIGRLPVA++LA+A+ FLH A+PGGV++HRDLKPSNIGLCG G +KV D GLSVVR+V + + Y+MSGMAG+KRFMAPEVC+GL+YNEKVDVYSF ++LWQIC L KPFAGM+EA H+ QVV GGLRPPLD R PP L +LQ+CWH +P+ RP+M AR LR +F GGG
Sbjct: 7 FNENVTLAELNEVEPFSQGGFCVICSCIYRGQQAVLKIPKPATTSSRSGGAAQDLLREISIYRQISLRGGHPNIARAFGAGTHVQQGETSPSPFLLLERLQGGTLENAFERSTAV---WSDPIGRLPVAIELAEAVAFLHEAAIPGGVVLHRDLKPSNIGLCGAGHIKVFDLGLSVVRQVLEAPTRVYEMSGMAGSKRFMAPEVCTGLSYNEKVDVYSFALVLWQICALRKPFAGMSEADHYLQVVQGGLRPPLDARWPPQLVHLLQACWHVHPDARPTMVQARDTLRQIFAMGGG 299
BLAST of mRNA_F-serratus_M_contig1238.1796.1 vs. uniprot
Match: A0A6H5JMU8_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMU8_9PHAE) HSP 1 Score: 367 bits (942), Expect = 8.920e-122 Identity = 182/298 (61.07%), Postives = 228/298 (76.51%), Query Frame = 1
Query: 1 FHDNMPLDELADVAPLTNGGFCVICSCGYRG-QRAVLKITRPRGPAGAAQDLLAEIELYKRITWRGGHANVARAFGSGFHIQQGERAPFLVLERLEGGTLEKAFDNSVQLNN------TWNNPIGRLPVALQLADALVFLHHEAVPGGVIIHRDLKPSNIGLCGQGRVKVIDFGLSVVREVRASS-SDTYQMSGMAGTKRFMAPEVCSGLAYNEKVDVYSFGVILWQICTLMKPFAGMNEATHFQQVVLGGLRPPLDPRLPPGLSAVLQSCWHANPNLRPSMPTARQMLRDVFVAGGG 870
F DN+ LD L D+ PL +GGFC++CSC Y G QRAVLKI +P+GP AA DLLAEI +YKRI+ RGGH N+A A G+GF +GE PFLVLERLEGG+L A ++S L W + + RLPVAL+LADAL +LH +A+PG I+HRDLKP+NIGLC +G VKV DFGLSVV+EVR + + YQMSGMAG+KRFM+PEVC GL YNEKVDVYSF ++LW+ICTL KPFAGM+ A H+++V+ GGLRPPLDPR P L +LQ+CWH +P+ RPS+ AR +L+ +F+AGGG
Sbjct: 47 FQDNLSLDALTDIQPLDHGGFCIVCSCTYNGVQRAVLKIPKPQGPNSAAADLLAEIAIYKRISARGGHPNIAAALGAGF-TSRGE--PFLVLERLEGGSLAGAIESSRTLGGDAADGGAWVDLVTRLPVALELADALQYLHRDALPG-FILHRDLKPTNIGLCAEGHVKVFDFGLSVVQEVRRGNLNQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWEICTLRKPFAGMSVADHYREVITGGLRPPLDPRWPGALQHLLQACWHEDPDRRPSISEARDVLQQIFLAGGG 340
BLAST of mRNA_F-serratus_M_contig1238.1796.1 vs. uniprot
Match: A0A6H5K4Q0_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4Q0_9PHAE) HSP 1 Score: 224 bits (572), Expect = 1.820e-65 Identity = 120/295 (40.68%), Postives = 171/295 (57.97%), Query Frame = 1
Query: 10 NMPLDELADVAPLTNGGFCVICSCGYRGQRAVLKITRPR--GPAGAAQDLLAEIELYKRITWRGGHANVARAFGSGFHIQQGERAPFLVLERLEGGTLEKA----FDNSVQLNNTWNNPIG-------RLPVALQLADALVFLHHEAVPGGVIIHRDLKPSNIGLCGQGRVKVIDFGLSVVREVRASSSDTYQMSGMAGTKRFMAPEVCSGLAYNEKVDVYSFGVILWQICTLMKPFAGMNEATHFQQVVLGGLRPPLDPRLPPGLSAVLQSCWHANPNLRPSMPTARQMLRDVF 855
N+ +L + + NGG+C + +C G++ +KI P GA DL EI + KR+ H ++ +G+G +GE PFLVLERL+ L + D++ + + RL LQL D L +LH E++PGG +IHRDLKPSNIG+ G +KV DFGL+ +RE R +D Y M+G G++RFMAPEV G+ YNEK D+YS+G++LW++C L KPFAGM+ H ++V G+RPPLD R P L ++L+SCWHA RP A + L +
Sbjct: 75 NLRFKDLVILEHIANGGYCTVLACMLHGEKRAVKIPLATCSDPEGAVADLTNEIRILKRLR----HPHLCSVYGAGGWRAEGE-LPFLVLERLQYKNLAQQCGTDVDDTSMIVEFKQKKLRAKFRFRKRLGYGLQLGDLLRYLHSESIPGGFVIHRDLKPSNIGISDDGVLKVFDFGLAKLREQRDPLTDRYVMTGQTGSQRFMAPEVFDGMPYNEKADIYSYGIVLWELCALQKPFAGMSSHEHARKVFRHGVRPPLDKRWPDELKSLLRSCWHAEAEERPDAAQAVETLARII 364
BLAST of mRNA_F-serratus_M_contig1238.1796.1 vs. uniprot
Match: A0A6H5LAW2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAW2_9PHAE) HSP 1 Score: 191 bits (486), Expect = 1.870e-52 Identity = 116/318 (36.48%), Postives = 164/318 (51.57%), Query Frame = 1
Query: 10 NMPLDELADVAPLTNGGFCVICSCGYRGQRAVLKITRP--RGPAGAAQDLLAEIELYKRITWRGGHANVARAFGSGF-------------------HIQQG--ERAPFLVLERLEGGTLEKAF----------DNSV--QLNNTWNNPIGR-LPVALQLADALVFLHHEAVPGGVIIHRDLKPSNIGLCGQGRVKVIDFGLS-VVREVRASSSDTYQMSGMAGTKRFMAPEVCSGLAYNEKVDVYSFGVILWQICTLMKPFAGMNEATHFQQVVLGGLRPPLDPRLPPGLSAVLQSCWHANPNLRPSMPTARQMLRDV 852
N+ +EL DV LTNGG C I + +RG+R V+K+ R P A +DL EI++ +R+ H N+ G+GF + Q E F++LE L GGTL ++ +SV + W P + + ALQLA AL +LH A+ G ++HRDLKP NI G GR+K+ DFGL+ +VR S Y+M+G G+ R+M PEV L YNEK DVYSFG+ILW++ +L +PF G+N Q V+ GG RPPL L +++ CW + + RP L +
Sbjct: 39 NLDFEELRDVQYLTNGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLQ----HPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQANAESKRFVLLEYLVGGTLTESMLTRNPPADGMMSSVVRRWQQNWQFPTKKAIDSALQLASALSYLHGRAIEGSFVVHRDLKPENIAFSGDGRLKLFDFGLAKIVRRRGGRLSQRYEMTGETGSTRYMCPEVAMQLPYNEKADVYSFGLILWEMLSLRRPFEGLNRKEFVQSVIKGGRRPPLQQEWSAALRELMRRCWDEDMDTRPEFEEVEDTLLQI 352
BLAST of mRNA_F-serratus_M_contig1238.1796.1 vs. uniprot
Match: A0A7S2LC32_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LC32_9STRA) HSP 1 Score: 182 bits (461), Expect = 1.060e-49 Identity = 107/298 (35.91%), Postives = 165/298 (55.37%), Query Frame = 1
Query: 10 NMPLDELADVAPLTNGGFCVICSCGYRGQRAVLKITRP--RGPAGAAQDLLAEIELYKRITWRGGHANVARAFGSGFHIQQGERAPFLVLERLEGGTLEKAFDNSVQLNNTWNNPIGR--------LPVALQLADALVFLHHEAVPGGVIIHRDLKPSNIGLCGQGRVKVIDFGLS-VVREVRASSSDTYQMSGMAGTKRFMAPEVCSGLAYNEKVDVYSFGVILWQICTLMKPFAGMNEATHFQQVVLGGLRPPLDPRLPPGLSAVLQSCWHANPNLRPSMPTARQMLRDVFVAGGG 870
NM + L ++ LT+GG I + G+ V+K +P + A A ++ AE++++ R++ H N+ G+G +G R F+VLERL+GGTL + ++ + R L A LADAL + H +AVPG +++HRD+KP NIG G +K+IDFGL+ VV +D Y +SG G+ R+MAPEV YN K DVYSFG+ILW++ KP+ G+N + + ++V GG RPP++ + P L +++ CW A+ RPS + L ++ A G
Sbjct: 45 NMKWNSLQNIEYLTDGGNSWIHTAVVNGKSVVVKTLKPECQDMAMAINEIEAELDVHARLS----HENIVALVGAGL-TSKGVR--FVVLERLDGGTLTQVLGYDTRIRDRRRRFFKRKQLSYLEVLNHARSLADALGYCHGKAVPGTLVLHRDVKPDNIGFTIDGTLKLIDFGLAKVVDNATPDCNDVYSLSGETGSLRYMAPEVADNRPYNHKADVYSFGIILWEMLAYKKPYDGLNRESFYVRIVDGGERPPVNKKWPKELVSLVTDCWSADIEQRPSFSAVVERLTNMISAEKG 335
BLAST of mRNA_F-serratus_M_contig1238.1796.1 vs. uniprot
Match: A0A835ZE86_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE86_9STRA) HSP 1 Score: 187 bits (474), Expect = 3.580e-49 Identity = 108/296 (36.49%), Postives = 160/296 (54.05%), Query Frame = 1
Query: 22 DELADVAPLTNGGFCVICSCGYRGQRAVLKITRP--RGPAGAAQDLLAEIELYKRITWRGGHANVARAFGSGFHIQQGERAPFLVLERLEGGTL-------------EKAFDNSVQLNNTWN--NPIGRLPVALQLADALVFLHHEAVPGGV-IIHRDLKPSNIGLCGQGRVKVIDFGLSVVREVRASSSDTYQMSGMAGTKRFMAPEVCSGLAYNEKVDVYSFGVILWQICTLMKPFAGMNEATHFQQVVLGGLRPPLDPRLPPGLSAVLQSCWHANPNLRPSMPTARQMLRDVF 855
++L ++ +T G C I S YRG + V+K+ R P A DL E+E + W H ++ + G+G R FLVLE LE GTL E ++ ++ + + + L A++LA+AL +LHH G ++HRDLKP NIG G +K+ DFGL+ + RA + Y M+G G+ R+MAPEV L YNEKVDVY+FG++LW++ + F GM+ +Q+VV GG+RPPLD PP L ++ CWHA+ + RP L+D++
Sbjct: 138 EDLKNLFYMTEGAMCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELE----VLWGLDHRHIIKLLGAGLREIPPYR--FLVLEYLEMGTLADRLNAGAPPGQEETGYNKIIKGTKKYQRFHQVTMLERAMELAEALEYLHHSVCGGAAFVVHRDLKPDNIGFKADGTLKLFDFGLARCVKRRARVNARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLQYRRVFEGMSVGDFYQRVVNGGIRPPLDSSWPPALRKLIDLCWHADVDKRPDFHYIAAQLKDIY 427
BLAST of mRNA_F-serratus_M_contig1238.1796.1 vs. uniprot
Match: A0A7S3V705_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V705_9STRA) HSP 1 Score: 186 bits (473), Expect = 1.440e-48 Identity = 105/293 (35.84%), Postives = 165/293 (56.31%), Query Frame = 1
Query: 10 NMPLDELADVAPLTNGGFCVICSCGYRGQRAVLKITRP--RGPAGAAQDLLAEIELYKRITWRGGHANVARAFGSGFHIQQGERAPFLVLERLEGGTLEKAFDNSVQLNNT----WN-NPIGRLPV---ALQLADALVFLHHEAVPGGVIIHRDLKPSNIGLCGQGRVKVIDFGLS-VVREVRASSSDTYQMSGMAGTKRFMAPEVCSGLAYNEKVDVYSFGVILWQICTLMKPFAGMNEATHFQQVVLGGLRPPLDPRLPPGLSAVLQSCWHANPNLRPSMPTARQMLRDVF 855
N+ +L ++ LT+GG I + V+K +P + A A ++ E+ +++ + H N+ FG+GF ++ F+V+ERL+GGTL + ++ + W N + + V A Q+A+A+ + H AV G +++HRDLKP NIGL G VK+IDFGL+ VV +S++ ++MSG G+ R+MAPEV SG YN KVD+YSFG+ILW++ KPF GMN +++VV GG RP + + P L+ V+Q CW RP+ + L ++
Sbjct: 391 NLTWSDLRNIEYLTDGGNNWIHTAVMNKTPIVIKQLKPEVQDVAIAMNEIEGELAIHRLLN----HKNIVSLFGAGF---TSNKSRFIVMERLDGGTLTQVLGYDTRIRDRRRRFWKKNKLSYIKVLDCAKQIAEAIDYCHRSAVEGSMVLHRDLKPDNIGLTLSGIVKIIDFGLARVVDNTSPNSNEVFEMSGETGSLRYMAPEVASGKPYNHKVDIYSFGMILWELVAYQKPFDGMNRDQFYERVVHGGFRPEITKKFPEDLADVIQRCWSTEAEKRPNFDQIIEELEEIL 676
BLAST of mRNA_F-serratus_M_contig1238.1796.1 vs. uniprot
Match: K0R303_THAOC (Protein kinase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R303_THAOC) HSP 1 Score: 187 bits (474), Expect = 1.540e-48 Identity = 103/278 (37.05%), Postives = 165/278 (59.35%), Query Frame = 1
Query: 10 NMPLDELADVAPLTNGGFCVICSCGYRGQRAVLKITRP--RGPAGAAQDLLAEIELYKRITWRGGHANVARAFGSGFHIQQGERAPFLVLERLEGGTLEK--AFDNSVQ--LNNTWNNP----IGRLPVALQLADALVFLHHEAVPGGVIIHRDLKPSNIGLCGQGRVKVIDFGLSVVREVRASSSDTYQMSGMAGTKRFMAPEVCSGLAYNEKVDVYSFGVILWQICTLMKPFAGMNEATHFQQVVLGGLRPPLDPRLPPGLSAVLQSCWHANPNLR 813
N+ D L +V LT+GG I + ++G+ V+K +P + A A +++ +E+E++ R+ H N+ + G+GF +G R F+VLERL+GGT+ + +DN ++ WN + L + LA++L + H A+P +++HRDLKP NIG G++++ DFGL+ + E + S+D Y MSG G+ R+MAPEV YN+K DVYSFG+ILW++ KP+ GMN + +VV GG RP ++ + P L +++SCW A + R
Sbjct: 441 NLQWDSLRNVEYLTDGGNAWIHTAVFQGKSVVVKTIKPECQDVALAIKEIESELEIHSRLD----HPNICKLVGAGF-TPRGIR--FIVLERLDGGTMSQLLGYDNRIRDRRRRFWNKKKLSYMEVLQCSRDLAESLAYCHGRAIPNAMVMHRDLKPDNIGFALDGKLQLFDFGLARIVENASISNDVYNMSGETGSLRYMAPEVADCRPYNQKADVYSFGIILWELVAFKKPYDGMNREEFYSRVVHGGERPAINKKWPDDLVQLMKSCWDAESSQR 711
BLAST of mRNA_F-serratus_M_contig1238.1796.1 vs. uniprot
Match: A0A6V2JN82_9STRA (Hypothetical protein n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2JN82_9STRA) HSP 1 Score: 186 bits (471), Expect = 1.640e-48 Identity = 107/281 (38.08%), Postives = 165/281 (58.72%), Query Frame = 1
Query: 10 NMPLDELADVAPLTNGGFCVICSCGYRGQRAVLKITRP--RGPAGAAQDLLAEIELYKRITWRGGHANVARAFGSGFHIQQGERAPFLVLERLEGGTLEK--AFDNSVQ--LNNTWNNP----IGRLPVALQLADALVFLHHEAVPGGVIIHRDLKPSNIGLCGQGRVKVIDFGLS-VVREVRASSSDTYQMSGMAGTKRFMAPEVCSGLAYNEKVDVYSFGVILWQICTLMKPFAGMNEATHFQQVVLGGLRPPLDPRLPPGLSAVLQSCWHANPNLRPS 819
N+ +L +V LT+GG I + G+ V+K +P + A A ++ E++++ ++ HAN+ G+G +G R F+VLERL+GGTL + +DN ++ W + + A +ADAL + H +A+PG + +HRDLKP NIG G+VK++DFGL+ +V+ + S+D Y MSG G+ R+MAPEV L YN+K DVYSFG+ILW++ KP+ GMN+ + +VV G RPP++ + P L ++Q CW + LRPS
Sbjct: 362 NLKWAQLNNVEYLTDGGNNWIHTAVLNGRPVVVKTLKPECQDVAVAINEIELELDIHSKLD----HANICSLVGAGT-TSKGVR--FIVLERLDGGTLTQMLGYDNRIRDRRRRFWRKKQFAFVEVMRFARCIADALNYCHSQAIPGNMCLHRDLKPDNIGFTLDGKVKLLDFGLARIVKNSDSDSNDVYHMSGQTGSLRYMAPEVAKSLPYNQKADVYSFGIILWELNAYKKPYEGMNKDEFYMRVVEGKERPPINKKWPEELVQLMQECWSFDARLRPS 635
BLAST of mRNA_F-serratus_M_contig1238.1796.1 vs. uniprot
Match: A0A835Z8J1_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J1_9STRA) HSP 1 Score: 182 bits (461), Expect = 6.660e-48 Identity = 102/291 (35.05%), Postives = 153/291 (52.58%), Query Frame = 1
Query: 25 ELADVAPLTNGGFCVICSCGYRGQRAVLKITRPRGPAGAAQDLLAEIELYKRITWRGGHANVARAFGSGFHIQQGERAPFLVLERLEGGTLEKAFDNSVQLNNTWN--------NPIGRLPVALQLADALVFLHHEAVPGGVIIHRDLKPSNIGLCGQGRVKVIDFGLSVVREVRASSSDTYQMSGMAGTKRFMAPEVCSGLAYNEKVDVYSFGVILWQICTLMKPFAGMNEATHFQQVVLGGLRPPLDPRLPPGLSAVLQSCWHANPNLRPSMPTARQMLRDVFVAGGGH 873
EL++V L NG C I + Y Q V+K+ R A A + E+EL + R + N+ R G+G ++ FL++ERL+GGTL + + + + N + L Q+AD L +LH EA+PG +++HRD+KP NIG G K++D GL+ T+ M+G G+ R+MAPEV YNEKVDV+S+G++LW++ TL KP+ GM + VV G +RPPL+ R P S +L +CW + RPS L+++ H
Sbjct: 238 ELSEVEFLVNGSRCTIYTATYNHQACVVKLLRK--DAVDAAIVRRELELEMELLMRLNNENIVRLLGAGIEPER-----FLIIERLDGGTLSQRCGSGGAVRDRRRRFKRKQPFNYLELLKCGRQIADGLRYLHDEAIPGRIVLHRDIKPDNIGFTKDGDAKLLDLGLAKAVPRSELQDQTFAMTGETGSTRYMAPEVAESRPYNEKVDVHSYGMVLWEMATLRKPYDGMARDQFYSAVVRGHVRPPLNKRWPKEFSDLLAACWAEDFKARPSFADVCNRLQEMLQEAADH 521 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1238.1796.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1238.1796.1 >prot_F-serratus_M_contig1238.1796.1 ID=prot_F-serratus_M_contig1238.1796.1|Name=mRNA_F-serratus_M_contig1238.1796.1|organism=Fucus serratus male|type=polypeptide|length=306bp MPLDELADVAPLTNGGFCVICSCGYRGQRAVLKITRPRGPAGAAQDLLAEback to top mRNA from alignment at F-serratus_M_contig1238:21542..28139- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1238.1796.1 ID=mRNA_F-serratus_M_contig1238.1796.1|Name=mRNA_F-serratus_M_contig1238.1796.1|organism=Fucus serratus male|type=mRNA|length=6598bp|location=Sequence derived from alignment at F-serratus_M_contig1238:21542..28139- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1238:21542..28139- >mRNA_F-serratus_M_contig1238.1796.1 ID=mRNA_F-serratus_M_contig1238.1796.1|Name=mRNA_F-serratus_M_contig1238.1796.1|organism=Fucus serratus male|type=CDS|length=1836bp|location=Sequence derived from alignment at F-serratus_M_contig1238:21542..28139- (Fucus serratus male)back to top |