mRNA_F-serratus_M_contig1218.1695.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1218.1695.1 vs. uniprot
Match: D7FT55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT55_ECTSI) HSP 1 Score: 357 bits (916), Expect = 8.020e-108 Identity = 174/349 (49.86%), Postives = 222/349 (63.61%), Query Frame = 3
Query: 858 YDEDEALAALLDDTCDYNLFMCCWTQNDD-QGMEDNTDVCRYTDSTYDGRDY--PAESEGEVHCHGFGWNEGADYLTQILSLYHFVKRFDHQNQRGYFGSIEGAPECACIEDMPVVSRADCTTFTRDGLTACANNDLRSHYRGRMDSPGGDLDFNLITTCDNENAPVTTDYAYVAEREVDATYDEDDAVEEVLASCEYNTYMCCWTENEGQGMEDNTDVCRVID--ESGEIMEYPGESEGDVHCHGFGWKDDDVFLTNMLPLYHYVINFDHADTRGYSGNVPGAPQCGCVEHMPVVSRADCSTFNRDG-----LTACTNNDLFTHYRGRLGKPNGDMDVNLVKQCNNAD 1874
YDED +A LLD TC+++ +MCCWT +D GM N+DVCR D +G + P +SEG V+CHGF W EGAD T IL LYH+VK + G++G++EGAPEC CIE+MP VS ++C+ ++ +G+ C NN L S YRGR+ P G +D NL+ TCDNE+ P DY Y SC +NTYMCCWTEN+G+GM DNTDVCRV+D GE +E+PG+SEG+VHCHGF W +D L L +V NFDH D RGY GN+ GAP CGC+E MPVVS ADC+T++ D TACT NDL T Y P G++ NLV C+NA+
Sbjct: 150 YDEDVEVAKLLDSTCEWDTYMCCWTGSDGADGMTANSDVCRVLDYPEEGDSFEMPRDSEGSVYCHGFAWVEGADVDTHILPLYHYVKNVGRTEEGGFYGNVEGAPECGCIEEMPQVSYSECSRYSWEGIVGCGNNGLLSQYRGRLGEPYGPMDDNLVRTCDNEDVP---DYDY--------------------GSCSHNTYMCCWTENDGEGMADNTDVCRVVDYPSMGETLEFPGDSEGEVHCHGFVWPEDATDKYIHL-LSQFVQNFDHRDRRGYYGNIEGAPMCGCIEEMPVVSEADCTTYDTDPEREGKFTACTKNDLRTRYEAEY--PTGEL-ANLVDTCDNAE 471
BLAST of mRNA_F-serratus_M_contig1218.1695.1 vs. uniprot
Match: D7G2N0_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7G2N0_ECTSI) HSP 1 Score: 343 bits (881), Expect = 1.250e-102 Identity = 170/349 (48.71%), Postives = 222/349 (63.61%), Query Frame = 3
Query: 858 YDEDEALAALLDDTCDYNLFMCCWTQND-DQGMEDNTDVCRYTDSTYDGR--DYPAESEGEVHCHGFGWNEGADYLTQILSLYHFVKRFDHQNQRGYFGSIEGAPECACIEDMPVVSRADCTTFTRDGLTACANNDLRSHYRGRMDSPGGDLDFNLITTCDNENAPVTTDYAYVAEREVDATYDEDDAVEEVLASCEYNTYMCCWTENEGQGMEDNTDVCRVID--ESGEIMEYPGESEGDVHCHGFGWKDDDVFLTNMLPLYHYVINFDHADTRGYSGNVPGAPQCGCVEHMPVVSRADCSTFN----RDG-LTACTNNDLFTHYRGRLGKPNGDMDVNLVKQCNNAD 1874
YDED +A +L +TC++N +MCCWT +D +GM N DVCR D +G + P + EG V+CHGF W + AD + IL LYH+V + + GY+G++EG P C CIEDMPVVS A C+ F +G+ C +N LRS Y+ ++D P G++++NL+ CDNE+ P DY + +C +NTYMCCWTEN+GQGM DNTDVCRVID GE EYPGESEG+VHCHGF W +D L L +V +FDH D RGY GN+ GAP CGC+E MP VS ADC+T++ R+G TACTNNDL T Y P G++D NLV +C+NA+
Sbjct: 164 YDEDVDVATILPETCEWNTYMCCWTGHDGSKGMYGNADVCRVLDYPEEGDVLELPRDDEGPVYCHGFAWADDADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACSKFGGEGIEPCWDNSLRSQYKYKLDEPKGEMEYNLVRECDNEDVP---DYDF--------------------RTCNHNTYMCCWTENDGQGMADNTDVCRVIDYPSMGETTEYPGESEGEVHCHGFVWPEDATDKYIHL-LAQFVQHFDHRDRRGYFGNIEGAPMCGCIEEMPQVSEADCTTYDNEPGREGKFTACTNNDLRTRYEEEY--PMGELD-NLVGECDNAE 485
BLAST of mRNA_F-serratus_M_contig1218.1695.1 vs. uniprot
Match: D7G2N2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2N2_ECTSI) HSP 1 Score: 351 bits (901), Expect = 2.990e-102 Identity = 174/347 (50.14%), Postives = 221/347 (63.69%), Query Frame = 3
Query: 858 YDEDEALAALLDDTCDYNLFMCCWTQNDDQG-MEDNTDVCRYTDSTYDGR--DYPAESEGEVHCHGFGWNEGADYLTQILSLYHFVKRFDHQNQRGYFGSIEGAPECACIEDMPVVSRADCTTFTRDGLTACANNDLRSHYRGRMDSPGGDLDFNLITTCDNENAPVTTDYAYVAEREVDATYDEDDAVEEVLASCEYNTYMCCWTENEGQGMEDNTDVCRVID--ESGEIMEYPGESEGDVHCHGFGWKDDDVFLTNMLPLYHYVINFDHADTRGYSGNVPGAPQCGCVEHMPVVSRADCSTFN----RDG-LTACTNNDLFTHYRGRLGKPNGDMDVNLVKQCNN 1868
YDED +A +L +TC++N +MCCWT +D G M NTDVCR D +G + P + EG V+CHGF W +GAD + IL LYH+V + + GY+G++EG P C CIEDMPVVS A C+ F R+G+ C N LRSHY+ R+D P G+L++NL+ CDNE+ P DY + +C +NTYMCCWTEN+GQGM DNTDVCRVID GE EYPGESEG+VHCHGF W +D L L +V +FDH D RGY GN+ GAP CGC+E MP VS ADC+T++ R+G TACT NDL T Y P G++D NLV +C+N
Sbjct: 121 YDEDVDVANILPETCEWNTYMCCWTGHDGSGGMYGNTDVCRVLDYPEEGDVLELPRDDEGPVYCHGFAWADGADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACSRFGREGIEPCGANSLRSHYKNRLDEPKGELEYNLVRECDNEDVP---DYDF--------------------RTCNHNTYMCCWTENDGQGMADNTDVCRVIDYPSMGETTEYPGESEGEVHCHGFVWPEDATDKYIHL-LAQFVQHFDHRDRRGYFGNIEGAPMCGCIEEMPQVSEADCTTYDNEPGREGKFTACTKNDLRTRYEEEY--PMGELD-NLVGECDN 440
BLAST of mRNA_F-serratus_M_contig1218.1695.1 vs. uniprot
Match: D7FT54_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT54_ECTSI) HSP 1 Score: 320 bits (820), Expect = 6.810e-95 Identity = 160/347 (46.11%), Postives = 212/347 (61.10%), Query Frame = 3
Query: 858 YDEDEALAALLDDTCDYNLFMCCWTQNDD-QGMEDNTDVCRYTDSTYDGR--DYPAESEGEVHCHGFGWNEGADYLTQILSLYHFVKRFDHQNQRGYFGSIEGAPECACIEDMPVVSRADCTTFTRDGLTACANNDLRSHYRGRMDSPGGDLDFNLITTCDNENAPVTTDYAYVAEREVDATYDEDDAVEEVLASCEYNTYMCCWTENEGQGMEDNTDVCRVID--ESGEIMEYPGESEGDVHCHGFGWKDDDVFLTNMLPLYHYVINFDHADTRGYSGNVPGAPQCGCVEHMPVVSRADCSTFN-----RDGLTACTNNDLFTHYRGRLGKPNGDMDVNLVKQCNN 1868
YDED +A LL + C++N +MCCWT ND GM NTDVCR D +G ++P +SEG V+CHGFGW +GAD T IL LYH V + GY+G++EGAP+C C+E+MPVVS ++C+ F DG+T C + L S+Y R+D P G L+ NL+ CDN + P D+ + C+ +TYMCCWTEN+ +G+ DNTDVCR+ D +GE +EYPG+SEGDVHCHG W +D L L YV FDH +GY GN+ GAP CGC E MP VS+ADC+ ++ D + C NDL T Y + P+GD+D NLV +C+N
Sbjct: 98 YDEDVHVAYLLPEMCEWNTYMCCWTGNDGPDGMTSNTDVCRVWDYPEEGNSLEFPRDSEGSVYCHGFGWADGADVNTNILPLYHSVINTGRTEEGGYYGNVEGAPQCGCLEEMPVVSFSECSRFDGDGITDCGEHGLYSNYVSRIDEPNGPLEDNLVRICDNYDVP---DFDF--------------------RECDSHTYMCCWTENDAKGVLDNTDVCRIHDYPSAGETLEYPGDSEGDVHCHGIVWPEDATDKYIHL-LAQYVQTFDHIGNKGYYGNIEGAPMCGCAEDMPEVSKADCTNYSPTEEDEDRIRGCDPNDLRTRYD--VLYPDGDLD-NLVGRCDN 417
BLAST of mRNA_F-serratus_M_contig1218.1695.1 vs. uniprot
Match: A0A6H5JT81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT81_9PHAE) HSP 1 Score: 241 bits (615), Expect = 1.710e-68 Identity = 134/343 (39.07%), Postives = 182/343 (53.06%), Query Frame = 3
Query: 876 LAALLDDTCDYNLFMCCWTQND-DQGMEDNTDVCRYTDSTYDGR--DYPAESEGEVHCHGFGWNEGADYLTQILSLYHFVKRFDHQNQRGYFGSIEGAPECACIEDMPVVSRADCTTFTRDGLTACANNDLRSHYRGRMDSPGGDLDFNLITTCDNENAPVTTDYAYVAEREVDATYDEDDAVEEVLASCEYNTYMCCWTENEGQGMEDNTDVCRVID--ESGEIMEYPGESEGDVHCHGFGWKDDDVFLTNMLPLYHYVINFDHADTRGYSGNVPGAPQCGCVEHMPVVSRADCSTFN----RDG-LTACTNNDLFTHYRGRLGKPNGDMDVNLVKQCNNAD 1874
+A +L +TC++N +MCCWT +D +GM N DVCR + +G + P + EG V+CHGF W +GAD + IL LYH+V + + GY+G++EG P C CIEDMPVVS A C+ F +G+ C +N LRS Y+ ++D P G++++NL+ CDNE+ P DY + +C +NTYMCCWTEN+GQGM DNTDVCRVID GE EYPG SEG+V S ADC+T++ R+G TACT NDL T Y P G++ NLV +C+NA+
Sbjct: 6 VATILPETCEWNTYMCCWTGHDGSKGMYGNADVCRVLNYPEEGDVLELPRDDEGPVYCHGFAWADGADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACSKFGGEGIEPCWDNSLRSQYKYKLDEPKGEMEYNLVRECDNEDVP---DYDF--------------------RTCNHNTYMCCWTENDGQGMADNTDVCRVIDYPSMGETTEYPGGSEGEV------------------------------------------------------SEADCTTYDNEPGREGKFTACTKNDLRTRYEEEY--PMGELS-NLVGECDNAE 268
BLAST of mRNA_F-serratus_M_contig1218.1695.1 vs. uniprot
Match: A0A6H5L319_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L319_9PHAE) HSP 1 Score: 240 bits (612), Expect = 7.460e-66 Identity = 144/397 (36.27%), Postives = 187/397 (47.10%), Query Frame = 3
Query: 858 YDEDEALAALLDDTCDYNLFMCCWTQNDD-QGMEDNTDVCRYTDSTYDGRDY--PAESEGEVHCHGFGWNEGADYLTQILSLYHFVKRFDHQNQRGYF-----GSIEGAPECACIEDMPVVSRADCTTFTRDGLTACANNDLRSHYRGRMDSPGGDLDFNLITTCDNENAPVTTDYAYVAEREVDATYDEDDAVEEVLASCEYNTYMCCWTENEGQGMEDNT----------------------------------------DVCRVID--ESGEIMEYPGESEGDVHCHGFGWKDDDVFLTNMLPLYHYVINFDHADTRGYSG---------------------------------------------NVPGAPQCGCVEHMPVVSRADCSTFNRD 1763
Y+E +A LLD TC+++ +MCCWT ND GM N+DVCR D +G + P ESEG V CHGF W EGAD T IL LYH+VK + G++ S+EG PEC CIE++P VS ++C+ ++ +G+ C NN L S YRG + P G +D NL+ TCDNE+ P DY + SC +NTYMCC TEN+GQGM +NT DVCRV+D G +E+ G+SE + H HGF W +D L L +V FDH D RGY G ++ GAP GCVE MPVVS AD +T++ D
Sbjct: 32 YEEHVEVAKLLDSTCEWDPYMCCWTGNDGADGMTANSDVCRVLDYPEEGDSFEMPRESEGFVCCHGFAWAEGADVDTHILPLYHYVKNVGRTEEAGFYEMKLPDSVEGTPECGCIEEIPSVSCSECSRYSWEGIAGCGNNGLLSQYRGCLGEPCGPMDDNLVRTCDNEDIP---DYDH--------------------GSCSHNTYMCCLTENDGQGMAENTVRRRVPAVASCVEFSCYSADRKDVGLTMLSVILGHLGATKDVCRVLDYPSVGGALEFAGDSEREAHRHGFVWTEDATDKYIHL-LSQFVQKFDHRDRRGYYGKYITVGKAAHNVIMVNGRTTGPGEDNTNNPLSPPPNVSHVILVVTSIEGAPMYGCVEEMPVVSEADGTTYDTD 404
BLAST of mRNA_F-serratus_M_contig1218.1695.1 vs. uniprot
Match: D7FT53_ECTSI (Imm downregulated 17 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT53_ECTSI) HSP 1 Score: 172 bits (437), Expect = 1.090e-45 Identity = 78/161 (48.45%), Postives = 109/161 (67.70%), Query Frame = 3
Query: 858 YDEDEALAALLDDTCDYNLFMCCWTQNDD-QGMEDNTDVCRYTDSTYDGRDYPAESEGEVHCHGFGWNEGADYLTQILSLYHFVKRFDH-QNQRGYFGSIEGAPECACIEDMPVVSRADCTTFTRDGLTACANNDLRSHYRGRMDSPGGDLDFNLITTCDN 1334
YDED +A LLD TC+++ +MCC+T +D +G+ NTDVC +G + P +SEG V+CHGF W EGAD IL LYH+VK + + GY+G++EGAPEC CIE+MP VS A+C+ F+ DG+ C L S Y GR+D+P G+++ NL+ +CDN
Sbjct: 24 YDEDLEVAKLLDGTCEWDTYMCCYTNHDSGEGVTANTDVCSVPS---EGLEMPGDSEGPVYCHGFAWPEGADVNNHILPLYHYVKNIGRTEEEGGYYGNVEGAPECGCIEEMPQVSFAECSRFSIDGIGECGEGGLYSQYNGRLDAPYGEMEHNLVRSCDN 181
BLAST of mRNA_F-serratus_M_contig1218.1695.1 vs. uniprot
Match: A0A6H5L9G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9G6_9PHAE) HSP 1 Score: 164 bits (415), Expect = 9.250e-43 Identity = 75/161 (46.58%), Postives = 103/161 (63.98%), Query Frame = 3
Query: 858 YDEDEALAALLDDTCDYNLFMCCWTQNDD-QGMEDNTDVCRYTDSTYDGRDYPAESEGEVHCHGFGWNEGADYLTQILSLYHFVKRFDH-QNQRGYFGSIEGAPECACIEDMPVVSRADCTTFTRDGLTACANNDLRSHYRGRMDSPGGDLDFNLITTCDN 1334
YDED +A LLDDTC+++ +MCC+T +D +G+ NTDVC +EG V+CHGF W +GAD IL LYH+VK + + GY+GS+EGAPEC CIE+MP VS A+C+ F DG+ C L S Y GR+ +P G+++ NL+ +CDN
Sbjct: 31 YDEDLEVAKLLDDTCEWDTYMCCFTNHDSGEGVTANTDVCS------------VPNEGSVYCHGFAWPDGADVNNHILPLYHYVKNIGRTEEEGGYYGSVEGAPECGCIEEMPQVSFAECSRFDIDGIVGCGEGGLYSQYNGRLGAPYGEMEHNLVRSCDN 179
BLAST of mRNA_F-serratus_M_contig1218.1695.1 vs. uniprot
Match: D7G8D2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8D2_ECTSI) HSP 1 Score: 129 bits (324), Expect = 3.130e-30 Identity = 69/152 (45.39%), Postives = 89/152 (58.55%), Query Frame = 3
Query: 1434 CEYNTYMCCWTENEGQGMEDNTDVCRVIDESGEIMEYPGESEGDVHCHGFGWKDD--DVFLTNMLPLYHYVINFDHADTRGYSGNVPGAPQCGCVEHMPVVSRADCSTFNRDGLT-----ACTNNDLFTHYRGRLGKPNGDMDVNLVKQCNN 1868
C+YNT+MCCW G ++DNTDVC E E+PG+SEG VHCHGF W ++ D F+ L L IN H D + Y+GN+PGAP C C+E MP VSRADC+ + + L AC+ NDL Y+ P G LVK+C+N
Sbjct: 59 CDYNTWMCCWDGRNGLAVKDNTDVCSYRGE-----EFPGDSEGPVHCHGFVWPENASDDFI-KYLALDVAFIN--HVDEKAYTGNIPGAPVCHCLEEMPEVSRADCTQYRKANLAGSDFMACSKNDLRRAYKELY--PTGRGRDLLVKKCDN 200
BLAST of mRNA_F-serratus_M_contig1218.1695.1 vs. uniprot
Match: D7G8C5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C5_ECTSI) HSP 1 Score: 129 bits (324), Expect = 1.740e-29 Identity = 69/152 (45.39%), Postives = 89/152 (58.55%), Query Frame = 3
Query: 1434 CEYNTYMCCWTENEGQGMEDNTDVCRVIDESGEIMEYPGESEGDVHCHGFGWKDD--DVFLTNMLPLYHYVINFDHADTRGYSGNVPGAPQCGCVEHMPVVSRADCSTFNRDGLT-----ACTNNDLFTHYRGRLGKPNGDMDVNLVKQCNN 1868
C+YNT+MCCW G ++DNTDVC E E+PG+SEG VHCHGF W ++ D F+ L L IN H D + Y+GN+PGAP C C+E MP VSRADC+ + + L AC+ NDL Y+ P G LVK+C+N
Sbjct: 123 CDYNTWMCCWDGRNGLAVKDNTDVCSYRGE-----EFPGDSEGPVHCHGFVWPENASDDFI-KYLALDVAFIN--HVDEKAYTGNIPGAPVCHCLEEMPEVSRADCTQYRKANLAGSDFMACSKNDLRRAYKELY--PTGRGRDLLVKKCDN 264 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1218.1695.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1218.1695.1 >prot_F-serratus_M_contig1218.1695.1 ID=prot_F-serratus_M_contig1218.1695.1|Name=mRNA_F-serratus_M_contig1218.1695.1|organism=Fucus serratus male|type=polypeptide|length=620bp MKLVLEFSFIALLAWFPAATASSSSPSAKMSATSSTSSEREVDLECYDEDback to top mRNA from alignment at F-serratus_M_contig1218:51970..59650- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1218.1695.1 ID=mRNA_F-serratus_M_contig1218.1695.1|Name=mRNA_F-serratus_M_contig1218.1695.1|organism=Fucus serratus male|type=mRNA|length=7681bp|location=Sequence derived from alignment at F-serratus_M_contig1218:51970..59650- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1218:51970..59650- >mRNA_F-serratus_M_contig1218.1695.1 ID=mRNA_F-serratus_M_contig1218.1695.1|Name=mRNA_F-serratus_M_contig1218.1695.1|organism=Fucus serratus male|type=CDS|length=3720bp|location=Sequence derived from alignment at F-serratus_M_contig1218:51970..59650- (Fucus serratus male)back to top |