mRNA_F-serratus_M_contig1200.1605.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1200.1605.1 vs. uniprot
Match: A0A6H5L0Y5_9PHAE (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y5_9PHAE) HSP 1 Score: 519 bits (1336), Expect = 2.670e-175 Identity = 260/380 (68.42%), Postives = 286/380 (75.26%), Query Frame = 1
Query: 694 SAPQQAELPDDDFATFPPLSPATLESVMGVDVFDLPEGGVTAREEGQETALPRQVLECIRDRHGMSEFGGGRKLLDAEYYDPDGEENTAGDVGGPDED-------------------EHRRPRPQLLFPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLPDGGSDVAR------------PHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLGPLRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNGHADASSVVAKFDATWR 1740
+A + +LPDDDFATFPPLSP TL+S+MGVDVFDLP GG+ A E GQ+ ALP QVLECIR RHG+ EF GGR+LLD EY+ DGE A G + + +LLFPGLRLLHAEPPVIGV DFFT EECD Y+SRS+SP PHMQRSATLGADVD+VAQRTSTTWFHR+SAVPELMAKASALVG+PF+EGRWEEAQTVRYRPGEKFTWHLDALPP PDLASKGGQRIATLLVYLTEMPE DGGATAFRDLGPLRVRPRKGSAL+FFPS GGAP+CPFDIRTLHAGE+VR G +QDKWIAQLWLRE YTPTVPK N H A+S VA+FD W+
Sbjct: 196 TAARGGQLPDDDFATFPPLSPDTLKSIMGVDVFDLPAGGIPASERGQQEALPPQVLECIRGRHGLEEFAGGRRLLDPEYFGADGEAGDAALTGSXXXXXXXXXXXXXXXXXXXXXGGDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXXXXXXXGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAEQDKWIAQLWLRERRYTPTVPKQNRHEHAASAVAEFDKIWQ 575
BLAST of mRNA_F-serratus_M_contig1200.1605.1 vs. uniprot
Match: D7G1H9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1H9_ECTSI) HSP 1 Score: 486 bits (1251), Expect = 7.480e-166 Identity = 242/349 (69.34%), Postives = 266/349 (76.22%), Query Frame = 1
Query: 775 MGVDVFDLPEGGVTAREEGQETALPRQVLECIRDRHGMSEFGGGRKLLDAEYYDPDGEENTAGDVGGPDED-------------------EHRRPRPQLLFPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLPDGGSDV--------ARPHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLGPLRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNGHADASSVVAKFDATWR 1740
MGVDVFDLP GG+ A E GQ+ ALP QVLECIR RHG+ EF GGR+LLD EYY DGE A +G + + +LLFPGLRLLHAEPPVIGV DFFT EECD Y+SRS+SP + PHMQRSATLGADVD+VAQRTSTTWFHR+SAVPELMAKASALVG+PF+EGRWEEAQTVRYRPGEKFTWHLDALPP PDLAS+GGQRIATLLVYLTEMPE DGGATAFRDLGPLRVRPRKGSAL+FFPS GGAP+CPFDIRTLHAGE+VR G +QDKWIAQLWLRE YTPTVPK N H A++VVA+FD W+
Sbjct: 1 MGVDVFDLPAGGIPASERGQQEALPPQVLECIRGRHGLQEFAGGRRLLDPEYYGADGEAGDAALMGSXXXXXXXXXXXXXXXXXXXXXXGDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASRGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAEQDKWIAQLWLRESRYTPTVPKQNRHEHAAAVVAEFDKIWQ 349
BLAST of mRNA_F-serratus_M_contig1200.1605.1 vs. uniprot
Match: A0A7S2UAB3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAB3_9STRA) HSP 1 Score: 285 bits (729), Expect = 9.640e-86 Identity = 144/243 (59.26%), Postives = 174/243 (71.60%), Query Frame = 1
Query: 1018 FPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLPDG--GSDVARPHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLG-----PLRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNGHADASSVVAKF 1725
F R+LH +P V+ VDDFFT EECDA ++RS + + G+ + + +S T+G D + AQRTSTTWFH Y+ VPELMAKA L+GI D +EE QTVRYR E FTWHLDAL PTP+LA KGGQR ATLLVYLT++ E+DGGAT FRDLG PL+VRP+KGSAL+FFP+ GG P+ P D+RTLH GE V S +QDKWIAQLWLRE PYTPT P GN HA ASS ++ +
Sbjct: 235 FSKFRVLHVDPMVLCVDDFFTPEECDALIARSTTTVITADNNEKEGTTLLPMKIGQSKTVGKDSRARAQRTSTTWFHHYAGVPELMAKACRLMGIN-DISAFEEPQTVRYRRTEHFTWHLDALAPTPELADKGGQRCATLLVYLTDLSEKDGGATMFRDLGGSDGEPLKVRPKKGSALLFFPAAGGIPSVPLDLRTLHCGEAVASDAEQDKWIAQLWLRETPYTPTAPPGNSHASASSPISDY 476
BLAST of mRNA_F-serratus_M_contig1200.1605.1 vs. uniprot
Match: A0A6H5KGF5_9PHAE (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGF5_9PHAE) HSP 1 Score: 280 bits (715), Expect = 3.220e-85 Identity = 157/359 (43.73%), Postives = 203/359 (56.55%), Query Frame = 1
Query: 673 ETPIRQNSAPQQAELPDDDFATFPPLSPATLESVMGVDVFDLPEGGVTAREEGQETALPRQVLECIRDRHGMSEFGGGRKLLDAEYYDPDGEENTAGDVGGPDEDEHRRPRPQLLFPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLPDGGSDVARPHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLGPLRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGK-QDKWIAQLWLREGPYTPTVPKGNGHADASSVVAKFDATWRQA 1746
+TP+R ELP+D F+ FPPL+P +++ G+ TA P +V + IR+RHG E++D + LFPG+RLLHA+P V V+ FFT +ECDAY++ S G P +SAT + TSTTWFH Y++ PEL+AKAS L+G+ D +WEE QTVRYRPGE+F WHLDALPP+ ASKGGQR AT+LVYLT M GGATAFRDLGPLRVRP+KG L+FFPS GG PFD R LHAGE+V G K ++K+IAQLW + PY P+VP+G+ H A + + + +A
Sbjct: 58 QTPVRAG------ELPEDAFSQFPPLTPEQKQTLQKAPA-------------GKATAFPVEVADRIRERHGF------------EHFD------------------------EKLFPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRKGG----LAPTELQSATTSSQCQQXX--TSTTWFHHYASAPELVAKASLLLGVD-DYSKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDYARRFAEA 354
BLAST of mRNA_F-serratus_M_contig1200.1605.1 vs. uniprot
Match: A0A7S1ZRX7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZRX7_9STRA) HSP 1 Score: 276 bits (706), Expect = 3.280e-85 Identity = 135/241 (56.02%), Postives = 171/241 (70.95%), Query Frame = 1
Query: 1018 FPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLPDGGSDVARPHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLG-----PLRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNGHADASSVVAKF 1725
F R+LH +P V+ VDDF T++ECD V+ + +P D ++ A + +S T+G D+ S +QRTSTTWFH Y +P+LMAKAS L+G+ + RWEE QTVRYR EKFTWHLDAL P+ +LA GGQR+ATL+VYL ++PE GG+T FRDLG PL+V P+KGSAL+FFP+ GG PN PFDIRTLHAGE V + DKWIAQLWLRE YTPT P GN HA A+ ++K+
Sbjct: 26 FEKFRVLHVDPMVLCVDDFLTSDECDTLVALTDNPKY----DKNANTAPMKIGQSKTVGKDMYSKSQRTSTTWFHHYRGLPQLMAKASRLLGLD-NIDRWEEPQTVRYRRSEKFTWHLDALGPSDELAKSGGQRVATLIVYLADLPEGSGGSTMFRDLGGESGEPLKVHPKKGSALVFFPAAGGIPNVPFDIRTLHAGEAVSDESEDDKWIAQLWLRETKYTPTAPPGNTHAAATDAISKY 261
BLAST of mRNA_F-serratus_M_contig1200.1605.1 vs. uniprot
Match: A0A7S4QXQ4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QXQ4_9STRA) HSP 1 Score: 276 bits (706), Expect = 7.400e-84 Identity = 135/241 (56.02%), Postives = 171/241 (70.95%), Query Frame = 1
Query: 1018 FPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLPDGGSDVARPHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLG-----PLRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNGHADASSVVAKF 1725
F R+LH +P V+ VDDF T++ECD V+ + +P D ++ A + +S T+G D+ S +QRTSTTWFH Y +P+LMAKAS L+G+ + RWEE QTVRYR EKFTWHLDAL P+ +LA GGQR+ATL+VYL ++PE GG+T FRDLG PL+V P+KGSAL+FFP+ GG PN PFDIRTLHAGE V + DKWIAQLWLRE YTPT P GN HA A+ ++K+
Sbjct: 123 FEKFRVLHVDPMVLCVDDFLTSDECDTLVALTDNPKY----DKNANTAPMKIGQSKTVGKDMYSKSQRTSTTWFHHYRGLPQLMAKASRLLGLD-NIDRWEEPQTVRYRRSEKFTWHLDALGPSDELAKSGGQRVATLIVYLADLPEGSGGSTMFRDLGGESGEPLKVHPKKGSALVFFPAAGGIPNVPFDIRTLHAGEAVSDESEDDKWIAQLWLRETKYTPTAPPGNTHAAATDAISKY 358
BLAST of mRNA_F-serratus_M_contig1200.1605.1 vs. uniprot
Match: A0A7S2KCF3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCF3_9STRA) HSP 1 Score: 277 bits (709), Expect = 2.670e-83 Identity = 141/241 (58.51%), Postives = 169/241 (70.12%), Query Frame = 1
Query: 1018 FPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLPDGGSDVARPHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLGP-----LRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNGHADASSVVAKF 1725
F R+LH +P VI VDDFFT EECD Y++ S P G+ M RS T+G D + +QRTSTTWFH Y VPELMAK+S L G+ D G +EE QTVRY+P +KFTWHLDAL P + SKGGQR ATLLVYLT++ EDGGAT FRDLGP L+V+P+KGSAL+FFP+ GG PN PFDIRTLHAGE+V + K DKWIAQLWLRE Y PTVP N HA A+ ++++
Sbjct: 202 FDKFRVLHIDPLVIAVDDFFTHEECDKYIAMSD-------PTAGNKDGDAVMTRSMTVGKDAAAKSQRTSTTWFHHYKNVPELMAKSSRLFGLD-DIGVFEEPQTVRYQPDQKFTWHLDALAPGSENISKGGQRTATLLVYLTDLGPEDGGATTFRDLGPAEGEPLKVQPKKGSALLFFPAAGGIPNTPFDIRTLHAGEVVSADCKSDKWIAQLWLREDSYEPTVPPENVHAAATEPISQY 434
BLAST of mRNA_F-serratus_M_contig1200.1605.1 vs. uniprot
Match: A0A7S2N1B0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N1B0_9STRA) HSP 1 Score: 267 bits (682), Expect = 2.910e-81 Identity = 132/240 (55.00%), Postives = 164/240 (68.33%), Query Frame = 1
Query: 1018 FPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLPDGGSDVARPHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLG-----PLRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNGHADASSVVAK 1722
F R+LH +P ++ +DDF T ECD Y+S + +P D ++ A + +S T+G D+ S +QRTSTTWFH Y + LMAKAS L+G+ E RWEE QTVRYR EKFTWHLDAL P+ +L GGQR+ATLLVYL ++P+ GG+T FRDLG PL+V+P+KGSAL+FFP+ GG PN PFDIRTLHAGE V DKWIAQLWLRE YTPT P GN H A V++
Sbjct: 57 FTKFRILHTDPMLLSIDDFLTPTECDTYISLTSNPKY----DKNANTAPMEIGQSKTVGKDMYSKSQRTSTTWFHHYRGMAGLMAKASRLLGLKGIE-RWEEPQTVRYRRSEKFTWHLDALAPSEELTKAGGQRVATLLVYLADLPDGCGGSTMFRDLGGESGEPLKVQPKKGSALLFFPAAGGIPNVPFDIRTLHAGEAVSDESDDDKWIAQLWLREHVYTPTAPPGNSHEAAVEAVSE 291
BLAST of mRNA_F-serratus_M_contig1200.1605.1 vs. uniprot
Match: K0SVE6_THAOC (Fe2OG dioxygenase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SVE6_THAOC) HSP 1 Score: 267 bits (683), Expect = 4.830e-79 Identity = 136/242 (56.20%), Postives = 170/242 (70.25%), Query Frame = 1
Query: 1018 FPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLPDGGSDVARPHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLA---SKGGQRIATLLVYLTEMPEEDGGATAFRDLG---PLRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNGHADASSVVAKF 1725
F R+LH +P VI VDDFFT+EECD YV S+ + G+ + + +S T+G D S AQRTSTTWFH Y+ VPELMA+A+ L+G+P R+EE QTVRYR EKFTWHLDAL +PD+A S GQR++TLLVYLT++ E+GGAT FRDLG PL+VRP+KGSAL+FFPS GG P+CPFDIRTLH GE V +KWIAQLWLR+ YTPT P G+ H A+ + ++
Sbjct: 229 FEQFRVLHVDPMVIAVDDFFTSEECDKYVQMSIDAENNQDQEAGA-LQPLLLGQSQTVGKDSRSKAQRTSTTWFHHYAGVPELMARAARLLGLP-GISRFEEPQTVRYRRSEKFTWHLDAL--SPDVANDSSSAGQRVSTLLVYLTDLKSEEGGATMFRDLGGDGPLKVRPKKGSALLFFPSAGGIPDCPFDIRTLHCGEAVGEDAPNEKWIAQLWLRQRDYTPTAPAGSEHRKATVAIQEY 466
BLAST of mRNA_F-serratus_M_contig1200.1605.1 vs. uniprot
Match: A0A448ZM68_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZM68_9STRA) HSP 1 Score: 265 bits (676), Expect = 4.020e-78 Identity = 137/249 (55.02%), Postives = 165/249 (66.27%), Query Frame = 1
Query: 1018 FPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLPDGGSDVARPHMQ-RSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLGP------------LRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNGHADASSVVAKF 1725
F + +LH +P V+ +DDFFT EECD YV SL AP+ D GS + RS T+G D ++ +QRTSTTWFH Y VPELM+KAS LVG+ + RWEE QTVRY+ EKFTWHLDAL P A KGGQR+ATLLVYL ++ E GGAT FRDL P L+V+P+KGSALMFFP+ GG P PFDIRTLH GE+V + DKWI+QLWLR YTPT P GN H +A V ++
Sbjct: 221 FEKINVLHLDPLVLSIDDFFTEEECDRYVEMSL----APVTDEGSQKTMDSFKTRSKTVGKDKNAKSQRTSTTWFHHYKNVPELMSKASRLVGLDTID-RWEEPQTVRYKRNEKFTWHLDALAPDQSTAEKGGQRLATLLVYLKDL--ESGGATIFRDLTPATGETDDNASGFLKVQPKKGSALMFFPAAGGIPGAPFDIRTLHCGEVVPGASETDKWISQLWLRATXYTPTAPPGNLHEEALDRVKEY 462 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1200.1605.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1200.1605.1 >prot_F-serratus_M_contig1200.1605.1 ID=prot_F-serratus_M_contig1200.1605.1|Name=mRNA_F-serratus_M_contig1200.1605.1|organism=Fucus serratus male|type=polypeptide|length=565bp MSSLRVSSCLAYAVTISSCWAGDVVTTCRAFQPSGGYDHDYRSRQQQIQRback to top mRNA from alignment at F-serratus_M_contig1200:134835..140636- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1200.1605.1 ID=mRNA_F-serratus_M_contig1200.1605.1|Name=mRNA_F-serratus_M_contig1200.1605.1|organism=Fucus serratus male|type=mRNA|length=5802bp|location=Sequence derived from alignment at F-serratus_M_contig1200:134835..140636- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1200:134835..140636- >mRNA_F-serratus_M_contig1200.1605.1 ID=mRNA_F-serratus_M_contig1200.1605.1|Name=mRNA_F-serratus_M_contig1200.1605.1|organism=Fucus serratus male|type=CDS|length=3390bp|location=Sequence derived from alignment at F-serratus_M_contig1200:134835..140636- (Fucus serratus male)back to top |