mRNA_F-serratus_M_contig12.1557.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig12.1557.1
Unique NamemRNA_F-serratus_M_contig12.1557.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig12.1557.1 vs. uniprot
Match: D8LFE9_ECTSI (Oxidized purine nucleoside triphosphate hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE9_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 3.610e-77
Identity = 123/185 (66.49%), Postives = 140/185 (75.68%), Query Frame = 3 
Query:  204 KKLKELTLVFCRRTSSSS---------------VDDGCNELLLGLKKRGFGEGKWNGFGGKVEAGETVEEAAKRELLEEAGVTAQRLSLRGQLTFNVPSYPSTMRVFVYEAVSYVGEPRESEEMRPRWFRETDLPFKEMWADDEHWMPLFLAGKFFQGEFDFSDEQTIIDYKLRDLPSAETIQEI 713
            K +K+LTLVFCRRT  SS                     E+LLG+KKRGFGEGKWNGFGGKVE+GE+VEEAAKREL+EEAGVTA+ LSLRG+L F+VPSYPS MRV VYEAVS+ GEP ESEEMRPRWFR  DLP KEMWADDEHWMPLFL GK F+GEF FSDEQTI+ + L  +   E +Q +
Sbjct:   16 KSVKDLTLVFCRRTKRSSDIGSEGXXXXXXXXXXXXXAKEILLGMKKRGFGEGKWNGFGGKVESGESVEEAAKRELMEEAGVTARELSLRGRLIFHVPSYPSVMRVHVYEAVSFEGEPEESEEMRPRWFRIRDLPLKEMWADDEHWMPLFLEGKSFRGEFHFSDEQTILRHVLEAVTPQEMMQVV 200
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BLAST of mRNA_F-serratus_M_contig12.1557.1 vs. uniprot
Match: A0A6H5JY16_9PHAE (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY16_9PHAE)

HSP 1 Score: 232 bits (591), Expect = 5.500e-72
Identity = 123/203 (60.59%), Postives = 141/203 (69.46%), Query Frame = 3 
Query:  204 KKLKELTLVFCRRTSSSS---------------VDDGCNELLLGLKKRGFGEGKWNG--------------FGGKVEAGETVEEAAKRELLEEAGVTAQRLSLRGQLTFNVPSYPSTMRVFVYEAVSYVGEPRESEEMRPRWFRETDLPFKEMWADDEHWMPLFLAGKFFQGEFDFSDEQTIIDYKLRDLPSAETIQEIASTS 725
            K +K+LTLV CRRT   S                +D  NE+LLG+KKRGFGEGKWNG              FGGKVE GE+VEEAAKREL+EEAGVTA+ LSLRG+L F+VPSY S MRV VYEAVSY GEP ESEEMRPRWF+  DLP KEMWADDEHWMPLFL GK F+GEF FSDEQTI+ + L  +   E ++ + S S
Sbjct:   57 KSVKDLTLVLCRRTRRISDTGSEGXXXXXXXXXXNDDANEILLGMKKRGFGEGKWNGEGQRAMESWLRESRFGGKVERGESVEEAAKRELMEEAGVTARELSLRGRLIFHVPSYHSVMRVHVYEAVSYEGEPEESEEMRPRWFKIRDLPLKEMWADDEHWMPLFLEGKSFRGEFHFSDEQTILRHVLEAVTPQEIMEVVLSES 259
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BLAST of mRNA_F-serratus_M_contig12.1557.1 vs. uniprot
Match: A0A835YJU4_9STRA (Oxidized purine nucleoside triphosphate hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU4_9STRA)

HSP 1 Score: 199 bits (506), Expect = 2.390e-60
Identity = 101/164 (61.59%), Postives = 125/164 (76.22%), Query Frame = 3 
Query:  177 SLMAAPKEGKKLKELTLVFCRRTSSSSVDDGCNELLLGLKKRGFGEGKWNGFGGKVEAGETVEEAAKRELLEEAGVTAQRLSLRGQLTFNVPSYPSTMRVFVYEAVSYVGEPRESEEMRPRWFRETDLPFKEMWADDEHWMPLFLAGKFFQGEFDFSDEQTIID 668
            ++ A P+E K+ ++LTLVFCRR ++        E+LLGLKK+GFG GKWNGFGGKVEAGE++E AAKRELLEEAGVTA +++ RG LTF + SY   M+V +YEAV + GEP ES+EM PRW+RE  LPF+ MWADD HWMPLFLAGK F+GEF F  +   ID
Sbjct:    7 TVAALPQE-KQPQDLTLVFCRRRTADGP-----EILLGLKKKGFGTGKWNGFGGKVEAGESIEVAAKRELLEEAGVTATKVAKRGHLTFVLDSYEHIMKVHLYEAVEWHGEPTESDEMAPRWYREDALPFELMWADDAHWMPLFLAGKSFEGEFIFKPDSVSID 164
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BLAST of mRNA_F-serratus_M_contig12.1557.1 vs. uniprot
Match: A0A7S2XVA8_9STRA (Oxidized purine nucleoside triphosphate hydrolase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVA8_9STRA)

HSP 1 Score: 200 bits (508), Expect = 8.820e-60
Identity = 95/156 (60.90%), Postives = 121/156 (77.56%), Query Frame = 3 
Query:  210 LKELTLVFCRRTSSSSVDDGCNELLLGLKKRGFGEGKWNGFGGKVEAGETVEEAAKRELLEEAGVTAQRLSLRGQLTFNVPSYPSTMRVFVYEAVSYVGEPRESEEMRPRWFRETDLPFKEMWADDEHWMPLFLAGKFFQGEFDFSDEQTIIDYKL 677
            +K+LTLVFCRR   ++ +    ++LLGLKK GFGEGKWNGFGGKVE GET+E AA RELLEE+G+ A+ L  RG L F+V +YP+ M V VYEA  + G+P+E+EEM P+WF E  LP ++MWADD +WMPLFL GK+F GEF FSDE TII+++L
Sbjct:   63 VKDLTLVFCRRLCENTSEP---QILLGLKKFGFGEGKWNGFGGKVEEGETIESAAARELLEESGLQAEELEQRGHLAFHVDTYPAVMSVHVYEATRFKGQPKETEEMIPKWFDEDKLPLQKMWADDTYWMPLFLGGKYFAGEFLFSDESTIIEHRL 215
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BLAST of mRNA_F-serratus_M_contig12.1557.1 vs. uniprot
Match: W7U305_9STRA (Oxidized purine nucleoside triphosphate hydrolase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U305_9STRA)

HSP 1 Score: 175 bits (444), Expect = 1.040e-49
Identity = 84/185 (45.41%), Postives = 128/185 (69.19%), Query Frame = 3 
Query:  153 FQANERGASLMAAPKEGKKLKELTLVFCRRTSSSSVDDGCNELLLGLKKRGFGEGKWNGFGGKVEAGETVEEAAKRELLEEAGVTAQRLSLRGQLTFNVPSYPSTMRVFVYEAVSYV-GEPRESEEMRPRWFRETDLPFKEMWADDEHWMPLFLAGKFFQGEFDFSDEQTIIDYKLRDLPSAETI 704
             +A  R  +  + P+   K K LTL+F RR + ++      E+LLG+KKRGFG+GKWNGFGGKVE  ET++ AA REL EE+ + A    LRG++TF   + P  ++V V+EA+  + GEP+E+EEM+P+W+ E+++P+++MWADD++W+PLFL G+ F+  F+F DE T++ Y L  +P  E +
Sbjct:   93 LKAERRMKASSSVPQPTLKTKLLTLLFVRRANPTT---NVKEVLLGMKKRGFGQGKWNGFGGKVETNETIKAAALRELEEESCLKASDAELRGKITFTFLTIPEVLKVHVFEALGPIEGEPQETEEMKPQWYAESEIPYEKMWADDKYWLPLFLEGRRFKALFEFDDESTLLRYDLGTVPEGEEL 274
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BLAST of mRNA_F-serratus_M_contig12.1557.1 vs. uniprot
Match: A0A1F5BT80_9BACT (Oxidized purine nucleoside triphosphate hydrolase n=1 Tax=Candidatus Azambacteria bacterium RIFCSPLOWO2_01_FULL_46_25 TaxID=1797298 RepID=A0A1F5BT80_9BACT)

HSP 1 Score: 168 bits (426), Expect = 1.790e-48
Identity = 83/158 (52.53%), Postives = 112/158 (70.89%), Query Frame = 3 
Query:  213 KELTLVFCRRTSSSSVDDGCNELLLGLKKRGFGEGKWNGFGGKVEAGETVEEAAKRELLEEAGVTAQRLSLRGQLTFNVPSYPSTMRVFVYEAVSYVGEPRESEEMRPRWFRETDLPFKEMWADDEHWMPLFLAGKFFQGEFDFSDEQTIIDYKLRDL 686
            K LTLVF RR S         ++LLG+KKRGFG G+WNGFGGKV+ GE+VE+AA+RE LEE G+ A+ LS RG L F     P  + V V+EA+S+ GE +ESEEM P+WF  T +P+  MW DD+ W+P+FLAGK F GEF F+D+ T+I + ++++
Sbjct:   14 KFLTLVFARRAS---------QILLGMKKRGFGAGRWNGFGGKVKDGESVEDAARREFLEETGLAARELSKRGDLHFTFAGDPVALYVQVFEALSWDGEAKESEEMAPKWFFLTKIPYDAMWPDDKLWLPIFLAGKKFTGEFAFTDQNTMISHSVKEV 162
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BLAST of mRNA_F-serratus_M_contig12.1557.1 vs. uniprot
Match: A0A482V0Z0_9ARCH (Oxidized purine nucleoside triphosphate hydrolase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482V0Z0_9ARCH)

HSP 1 Score: 166 bits (421), Expect = 1.420e-47
Identity = 81/171 (47.37%), Postives = 111/171 (64.91%), Query Frame = 3 
Query:  189 APKEGKKLK-----ELTLVFCRRTSSSSVDDGCNELLLGLKKRGFGEGKWNGFGGKVEAGETVEEAAKRELLEEAGVTAQRLSLRGQLTFNVPSYPSTMRVFVYEAVSYVGEPRESEEMRPRWFRETDLPFKEMWADDEHWMPLFLAGKFFQGEFDFSDEQTIIDYKLRDL 686
            A +EG+ +K     + TLVFCRR S +       ++LLG+KKRGFG GKWNGFGGK+E GE+VE+AA+RELLEE+GV A  L   G L F +      M V V++   +  E  E+EEM P+W+ E  +P+  MW DD +W+PL L  K F G F++ DE TI+DY +R++
Sbjct:    2 ASEEGQDVKAYTSQDYTLVFCRRPSQTPT--ASKQILLGMKKRGFGVGKWNGFGGKIEEGESVEQAARRELLEESGVIANSLQRIGYLVFKLTDIAKIMHVHVFQTFEFTNEAVETEEMLPQWYAEDSIPYTNMWMDDAYWLPLLLEHKQFIGRFEYEDEDTIVDYSIREV 170
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BLAST of mRNA_F-serratus_M_contig12.1557.1 vs. uniprot
Match: A0A061R035_9CHLO (Oxidized purine nucleoside triphosphate hydrolase (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R035_9CHLO)

HSP 1 Score: 161 bits (408), Expect = 8.700e-46
Identity = 83/164 (50.61%), Postives = 107/164 (65.24%), Query Frame = 3 
Query:  213 KELTLVFCRRTSSSSVDDGCNELLLGLKKRGFGEGKWNGFGGKVEAGETVEEAAKRELLEEAGVTAQRLSLRGQLTFNVPSYPSTMRVFVYEAVSYVGEPRESEEMRPRWFRETDLPFKEMWADDEHWMPLFLAGKFFQGEFDFSDEQTIIDYKLRDLPSAETI 704
            K LTLV         V DG + +LLG KKRGFGEG +NGFGGKVE GE V +AA REL EEAG++A+ L LRG LTFN    P    V V+    + G+P ES+EM P+WF  + +P+++MWADD +W PLFL GK F G FDF D  +++ + LR+   AE +
Sbjct:    6 KLLTLVI--------VQDG-SRILLGKKKRGFGEGYFNGFGGKVEPGEKVSQAALRELKEEAGISAKDLELRGVLTFNFDDKPQPWEVHVFRVSHWSGQPAESDEMIPQWFHSSSIPYEQMWADDPYWYPLFLEGKRFTGTFDFRDTHSLVSHSLREAGEAELL 160
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BLAST of mRNA_F-serratus_M_contig12.1557.1 vs. uniprot
Match: A0A2H0SCH5_9BACT (Oxidized purine nucleoside triphosphate hydrolase n=2 Tax=Bacteria TaxID=2 RepID=A0A2H0SCH5_9BACT)

HSP 1 Score: 162 bits (410), Expect = 8.870e-46
Identity = 85/164 (51.83%), Postives = 104/164 (63.41%), Query Frame = 3 
Query:  186 AAPKEGKKLKELTLVFCRRTSSSSVDDGCNELLLGLKKRGFGEGKWNGFGGKVEAGETVEEAAKRELLEEAGVTAQRLSLRGQLTFNVPSYPSTMRVFVYEAVSYVGEPRESEEMRPRWFRETDLPFKEMWADDEHWMPLFLAGKFFQGEFDFSDEQTIIDYKL 677
            AA    + +K  TLV         ++DG   +LLGLKKRGFGEGKWNGFGGKVEAGET+E+AA REL EEAG+    L       F         RV  + A S+ GEP+E+EEMRPRWF   ++PF +MW D+EHW P FL GKFF G F F D  T+ID+K+
Sbjct:   24 AAQTRRRAMKVCTLVI--------INDG-ERVLLGLKKRGFGEGKWNGFGGKVEAGETIEDAAARELKEEAGIIPIDLRKVALFEFLFDDDTEDTRVHFFCASSFTGEPQETEEMRPRWFLHDEIPFNDMWVDNEHWFPHFLTGKFFHGTFLFKDTSTLIDHKI 178
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BLAST of mRNA_F-serratus_M_contig12.1557.1 vs. uniprot
Match: A0A7C4NGQ0_9BACT (Oxidized purine nucleoside triphosphate hydrolase n=2 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=A0A7C4NGQ0_9BACT)

HSP 1 Score: 161 bits (407), Expect = 9.580e-46
Identity = 69/137 (50.36%), Postives = 105/137 (76.64%), Query Frame = 3 
Query:  273 NELLLGLKKRGFGEGKWNGFGGKVEAGETVEEAAKRELLEEAGVTAQRLSLRGQLTFNVPSYPST-MRVFVYEAVSYVGEPRESEEMRPRWFRETDLPFKEMWADDEHWMPLFLAGKFFQGEFDFSDEQTIIDYKLR 680
            N++LLG+KKRGFG G+WNGFGGKV+ GE +EEA KREL EE G+ A+R+  +G L F     P   + V +++ + + G+PRESEEM+P+WFR+ ++PF +MW DD++W+P+FL GK  +G+F F+DE T+++Y+++
Sbjct:   15 NKILLGMKKRGFGVGRWNGFGGKVKEGEKIEEAVKRELKEEVGILAKRIEWKGVLNFVFDQNPEEILEVHLFKVLKFEGKPRESEEMKPKWFRKEEIPFDKMWPDDKYWLPIFLNGKKIEGKFHFADENTLLNYEIK 151
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig12.1557.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFE9_ECTSI3.610e-7766.49Oxidized purine nucleoside triphosphate hydrolase ... [more]
A0A6H5JY16_9PHAE5.500e-7260.59Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A835YJU4_9STRA2.390e-6061.59Oxidized purine nucleoside triphosphate hydrolase ... [more]
A0A7S2XVA8_9STRA8.820e-6060.90Oxidized purine nucleoside triphosphate hydrolase ... [more]
W7U305_9STRA1.040e-4945.41Oxidized purine nucleoside triphosphate hydrolase ... [more]
A0A1F5BT80_9BACT1.790e-4852.53Oxidized purine nucleoside triphosphate hydrolase ... [more]
A0A482V0Z0_9ARCH1.420e-4747.37Oxidized purine nucleoside triphosphate hydrolase ... [more]
A0A061R035_9CHLO8.700e-4650.61Oxidized purine nucleoside triphosphate hydrolase ... [more]
A0A2H0SCH5_9BACT8.870e-4651.83Oxidized purine nucleoside triphosphate hydrolase ... [more]
A0A7C4NGQ0_9BACT9.580e-4650.36Oxidized purine nucleoside triphosphate hydrolase ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig12contigF-serratus_M_contig12:936664..943594 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score244.2
Seed ortholog evalue6.2e-62
Seed eggNOG ortholog2880.D8LFE9
Preferred nameNUDT1
KEGG koko:K03574,ko:K17816
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0001669,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0005886,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006259,GO:0006281,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0007154,GO:0007275,GO:0007548,GO:0007568,GO:0008150,GO:0008152,GO:0008406,GO:0008413,GO:0008584,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009605,GO:0009987,GO:0009991,GO:0010035,GO:0010038,GO:0012505,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022414,GO:0030141,GO:0030515,GO:0031090,GO:0031410,GO:0031668,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031982,GO:0032501,GO:0032502,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0035539,GO:0036219,GO:0042221,GO:0042262,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044713,GO:0044714,GO:0045137,GO:0046060,GO:0046061,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046546,GO:0046661,GO:0046686,GO:0046700,GO:0047429,GO:0047693,GO:0048513,GO:0048608,GO:0048731,GO:0048856,GO:0050896,GO:0051716,GO:0055086,GO:0061458,GO:0070013,GO:0071496,GO:0071704,GO:0071944,GO:0072521,GO:0072523,GO:0090304,GO:0097159,GO:0097223,GO:0097708,GO:0099503,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576
EggNOG free text desc.2-hydroxy-adenosine triphosphate pyrophosphatase activity
EggNOG OGs2S254@2759,COG0494@1
Ec32 ortholog descriptionNUDIX hydrolase domain-like
Ec32 orthologEc-07_006020.1
EC3.6.1.55,3.6.1.56
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03400
Exons5
Model size935
Cds size717
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929107.9995153-UTR-F-serratus_M_contig12:936663..9366831622929107.9995153-UTR-F-serratus_M_contig12:936663..936683Fucus serratus maleUTRF-serratus_M_contig12 936664..936683 +
1690962708.273243-UTR-F-serratus_M_contig12:936663..9366831690962708.273243-UTR-F-serratus_M_contig12:936663..936683Fucus serratus maleUTRF-serratus_M_contig12 936664..936683 +
1622929108.1037471-UTR-F-serratus_M_contig12:943396..9435941622929108.1037471-UTR-F-serratus_M_contig12:943396..943594Fucus serratus maleUTRF-serratus_M_contig12 943397..943594 +
1690962708.347021-UTR-F-serratus_M_contig12:943396..9435941690962708.347021-UTR-F-serratus_M_contig12:943396..943594Fucus serratus maleUTRF-serratus_M_contig12 943397..943594 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929108.0274615-CDS-F-serratus_M_contig12:936683..9368071622929108.0274615-CDS-F-serratus_M_contig12:936683..936807Fucus serratus maleCDSF-serratus_M_contig12 936684..936807 +
1690962708.290498-CDS-F-serratus_M_contig12:936683..9368071690962708.290498-CDS-F-serratus_M_contig12:936683..936807Fucus serratus maleCDSF-serratus_M_contig12 936684..936807 +
1622929108.046145-CDS-F-serratus_M_contig12:940802..9409851622929108.046145-CDS-F-serratus_M_contig12:940802..940985Fucus serratus maleCDSF-serratus_M_contig12 940803..940985 +
1690962708.2997248-CDS-F-serratus_M_contig12:940802..9409851690962708.2997248-CDS-F-serratus_M_contig12:940802..940985Fucus serratus maleCDSF-serratus_M_contig12 940803..940985 +
1622929108.0646808-CDS-F-serratus_M_contig12:942338..9424811622929108.0646808-CDS-F-serratus_M_contig12:942338..942481Fucus serratus maleCDSF-serratus_M_contig12 942339..942481 +
1690962708.3130023-CDS-F-serratus_M_contig12:942338..9424811690962708.3130023-CDS-F-serratus_M_contig12:942338..942481Fucus serratus maleCDSF-serratus_M_contig12 942339..942481 +
1622929108.0766299-CDS-F-serratus_M_contig12:942680..9427791622929108.0766299-CDS-F-serratus_M_contig12:942680..942779Fucus serratus maleCDSF-serratus_M_contig12 942681..942779 +
1690962708.3230867-CDS-F-serratus_M_contig12:942680..9427791690962708.3230867-CDS-F-serratus_M_contig12:942680..942779Fucus serratus maleCDSF-serratus_M_contig12 942681..942779 +
1622929108.0897326-CDS-F-serratus_M_contig12:943228..9433961622929108.0897326-CDS-F-serratus_M_contig12:943228..943396Fucus serratus maleCDSF-serratus_M_contig12 943229..943396 +
1690962708.3320556-CDS-F-serratus_M_contig12:943228..9433961690962708.3320556-CDS-F-serratus_M_contig12:943228..943396Fucus serratus maleCDSF-serratus_M_contig12 943229..943396 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig12.1557.1prot_F-serratus_M_contig12.1557.1Fucus serratus malepolypeptideF-serratus_M_contig12 936684..943396 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig12.1557.1

>prot_F-serratus_M_contig12.1557.1 ID=prot_F-serratus_M_contig12.1557.1|Name=mRNA_F-serratus_M_contig12.1557.1|organism=Fucus serratus male|type=polypeptide|length=239bp
MSCKAIVVCLSFHLIQSDSLLIRPPTHQATARLQLSVLSASPCHFQANER
GASLMAAPKEGKKLKELTLVFCRRTSSSSVDDGCNELLLGLKKRGFGEGK
WNGFGGKVEAGETVEEAAKRELLEEAGVTAQRLSLRGQLTFNVPSYPSTM
RVFVYEAVSYVGEPRESEEMRPRWFRETDLPFKEMWADDEHWMPLFLAGK
FFQGEFDFSDEQTIIDYKLRDLPSAETIQEIASTSTST*
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mRNA from alignment at F-serratus_M_contig12:936664..943594+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig12.1557.1 ID=mRNA_F-serratus_M_contig12.1557.1|Name=mRNA_F-serratus_M_contig12.1557.1|organism=Fucus serratus male|type=mRNA|length=6931bp|location=Sequence derived from alignment at F-serratus_M_contig12:936664..943594+ (Fucus serratus male)
CGACGAAAAATACCTCTGTCATGTCGTGCAAGGCAATTGTTGTGTGTCTC
TCTTTCCATCTAATACAGTCAGACTCTCTCCTGATCCGACCACCAACGCA
CCAAGCAACCGCTCGTCTGCAGCTATCCGTGCTGAGTGCTTCACGTGAGC
TCGAAATTTCGATTTCAAAATATGTTTTATATGTACGCTGCCTTTTGAAC
CACAGCAGATTCTAGTAGTACGGGATACTCGTACAAGCCAACCAGTAGAG
GTACAGTATTCTTACCACCTGAGGTAGCGTAGTCTAATGCGTTGTACAAG
GTGCTGTACGAGTATGCACTTTCCAGAGAAAATCTGCACCTTCCGGGTAT
TGACAACGTCGGAGGGAACTTTGTCGAAGCGTGGTCGAGAGTTTTCAAAT
CATTTGCCGACCTAGGCCTCTCGATCTACACACAGCAAAGTATCGTATAT
AGTAGCTGGAAGCTGGAAGGCCACCCAAACGTCTCCGCCTGATCTCCGCG
GGCGGTGGATGGTATCCACTGGATGCTCGAATGTGATCGGATCTGTCGGG
TTTTTTTCTTTTTTTCAAACACCCCGATCAACGTGGAACATGTTTGTATA
CTGGTATACTGACTGTAGAAACAGTCTGAACCCGTCGGACGTTCCAAGTC
AGTTGGTATACAGTACTCTATATTTCCATATTGTATATGACTCTCATGTT
GCATTTTCTCTAATATTTTGGCGTTTCCTTTCTTATGAAATATGAAAATG
AAGCATGAGATTCCTGGCTAAATGTCGCGGGGTTTCATGCTGGGTTCGAC
ACAACTCGTTTTCCCGCCCTCGGCAACAAAGCGGAAGAGTCGCAGTACAT
TTTCCATAACCCGACTCGGCTAATCCGATTCGTAGTCTGATGAACAGAAA
AACTCCAGCAATCATACGATAAATTTGGAACGTGGAACGGAAACGGGGCT
AAAATGACACCGCGACGGCGGTGTGGAAGTGGAACGTTATACCATATTTT
GTATTTACAGTAGTGGTACAGGGGTGTGGATTTTGATTAACGGAAGCGGT
GCGGGAGGGCACGCGGAAGGATCCACTCCGTGGTGCGGAATGTGGTGCGA
AAGTGGATGTGGAACGGAATCGATTGACCGCGGGACGATTTTTTTGTTTT
TTTTTTTTTTTTTTTTTATCACTCTTATAGCCGATGGACCTCTACTTACC
ATCCTGCCTGTGGTCACAAAGGATCTTCCCATCTCTCCCCGGTTCACGCC
TTACAATTTTTATCGCGATGCAAGTTCAGCACTCTTACAACTCGTCAACC
ATTGGTTAAATTTTACTTACTCACGTTCCGACGCTTTCCGTTACGAAAGA
AAGAACACAAATTCTGCTTAAGCTAAGAATCGAACTCACGACTTCCGCAC
TAGCAGGTACCCTGGTACGCAGGTTACCTACTAGACCACTCGGGCGACGA
ATGGCAAATGGCGGAGAAATATGGCGGATGGCGGCTATTATACTACGTTT
GGATTCTGATTTGACCTTATATATGTGCGGGGGGAGGTATTGCCGATCGC
AGAACCCGTCGTTTAAAATGGAAGAACATGTAAATGTTGTTTTATCGACT
ACCAGTCTTTAATCGAGCCTGTTTCAATATTTATTAAATTGTACATAACG
GAGCAATCCGGCCCTGTCATACCTAGTCATTCTATCTCACTTGCATTGAT
TGGTTCTCTCAGAGAGGTACCAATTATTTTTGTTGCGAAAACCTCTGATC
AGACGCGACAGAGGGGTCACTCTATCTCTCTGCTTTTTGTTGCACAGTTA
GTTCTTCCTTAAGCCCTTAGCGCCTTGCTCTTCCCTCCCTGCTTCCTTGT
TATTCTTGTATTCTATTCTATTCTCTAGATATTCTTGGTCGACATCCACT
GAACCAACACTCTCTTGTCCACTCTTCTTTCTCCTTCCGCCCAAGCCTCC
CCCGTTTCCCTCGTCTCGTCTACAACTCTTTTGGGGGTTTGTTGCTCTTC
TTCGCCTCCCCTTCGCCCTCCCCGTTCCTGGCCCTCGCTTCCCATCCCTG
GGCTCTGGTCCTTCGCATAATGCGACGGTATCACTGGGGCGTTGGGTCTT
GCGGCTGTGGTTGCTGGTTACTACTATAGTTGGCGTCGCCCCCCCCCCTT
TCGCGTCTTCCAGCCCACCTTTATTACCTTTATTACCTTTATTACCTTTA
TTATATTTATCACATTTATTGCCTTCATTACCTTGATTACCTCTATTATC
TCTATTACCAATTCGAAGGTTCCCAGACTCTCTCTCCCCTCCCATCTCTT
ATCTATGTTCTCGTCCGTTATCGCCGGCATTCCTACCCTCGAGCTCAATC
ATGTACTCGTATTTGTTCCCGTTCCCGCCCCCCTCTATTTTCCCGTCACC
GTTTCCTCCTTCCCGTCTCTAGTGCCTTGTTCTCCCCTCGGTACCACATC
GTCGGGCAGGCACCGGATCTTACGCCAGAAGCTGCTGGCTACCTGCACGC
GCTACCTCCTGTCTAAAGAGACGATGCCTCGTGCGGAATGTTTGTACCTG
GTCTTCTACTTTTCTTCTTTCTTGGTGTGGCGGACACGAGAGCTCTCCTC
CTCCCCGCTTCCCTCTCCATTCGTGTCCCCTTTCCCGTCTCCCATCCCAT
CCCCGTTCCCGCCCCCATCTCCGTTCCCGTCCCCGCCTCCATCTCCGCTA
CTGCCCTCGTTTTCGTCCCCGCTCCCGTCCTCGTCCTCGTCTTTTGTGCG
TCCTCTCGGTTCAAGTCCCCGTTCCCGTTCCCGCCCCGTCCCTGCTCCCG
TCCCCATCATCTGCTGTACTGTGATCACATTGGCAGTAATAAACGAACTA
AATCCGTCATACACGTATGCGCAACCCACAAATCAAGACGAGTATCCAGC
AGACAAGATGCGGCGAGATTGTTACTGTATTCTTAATAGTAATAGTAGTA
GCAGTTCATCCGCGCTTTCTACAAGGGAATCAACAAGCGACAGTAGTTCA
CGTTGGAAAACGGGAGATGGGAGCATGGAGCCACTGGTAGTGGTCGGTTT
GTTTGTTTTGCAGCTCCAAAAACGCTATCACCGGGAGTTCCATCAGCAGC
TCCGTCGTCCTCTATGAGTACGACTTCGAAGCAATTCAGATGTAACACGT
GCCTTCTCCTAACCTCAGGCTTGGCTCTCGGGTGCAAGCTATTCTCCTTG
ATGGAATCTCGAACCGTTAGAAATATTTTGCTCTTTCTTTTCTGATATTC
TGCCTTGGAAATCGGAAATAACATGAATGATGCGTTGCTCTGGTCGTGGA
TGTGTCTTTGTTTGTGTGGGTTTGTAGTCATCACCTTGCATGATTCCGCC
GACACGGTATTTTCAACACGCCCACTTCATACCAATAGTAGGCGTGGGAA
GGAGAGGCGCACATTCATTTGTCCAGTCAGTGAGCGCCATCGGTACGCAA
TTGCGTGACCTGATAAACTCGGGACTGACCCGATGGCGTATAGCGGTTTA
AATAAACAAATGGACGCCGCCGCGGAAATCGGGAGGAATCCCGCTAGTAA
GCACCAGATTCAGCCTGAGCATGGAGATTGGCAAGCTGACACGGGACGGG
ACTGCCAAACTTGGCTCGCGAAACCAAATTCTCAGGCGTTATTACGAACG
GGGACTGGGAAAAGTTTATTTTTCCTGTTCAGCTGACCACGAGCAGGATT
GGCAGCCTTACCCGGTTGGTCCTTCTCTTGCTATGTGTGTGACCGTACAT
ACATACATAGTTTCATACGTCATTAGAAGGCATGGGGCAATCCCTGAGAG
AAAAATAAAATAAAAATGTAAGTATATATAAAGTTAAACGGAAATACCGT
TACACTTTCCCTCTGGTGGTGTGGAACTGAACGTTTTGACATTTTTTCCC
CTGACTGGGGGATGCTCAGAAGGTCTAGGTGCGTTCTGTATTTTCTTCAA
ACTCCCTTCGAGGAAATTGTTTAAAGGCCATGAAGATGTTTTGTATTTGC
AGCCCATGATTCCACCCAAACGTGTTGACATTTTTTTCCCCTGACGAGGG
GATGCTCAGAAGGTCCAGATGCGTTCAGATTTTTCTTTTAAACAACACAA
AGCGCGAACTAATGGAAGGCGCTCGTATGTCGACTGAAGCTTGTCACTTC
CAGGCCAACGAGCGTGGGGCGAGTTTGATGGCTGCTCCAAAAGAGGGGAA
GAAGTTGAAGGAGCTCACGCTGGTGTTCTGCAGGCGAACATCGTCGAGCT
CTGTTGATGACGGCTGCAACGAGCTGCTCTTGGGGCTCAAGAAGCGGGGC
TTTGGAGAGGGGAAGTGGAATGGTGAGCACGTACAGAGGACTAGATGCCT
CTTTTGGGGGTCCGTTTATTCATTAGCGGATTAGGGGGGCCTTTTCATGT
ATACGTTTTGTGTGTGGGGAAAGTCGCCCTATTATATTAAGATTAATAGT
AGTATTAAGGGAGCGATTGTTGGGAGAAGGGAGGATTCCCCTCCACGTTG
CCGCCACCCGATCCTGATCGGCCCTAGGATAATTAAATACACTATTAATA
GTACGGATATCGAGGGGGAGGGGTATATTTGAGAAAATGGCATGGTGTTT
GAGTTTTGTTCCGGCCGGCGTAACCGTATAAAAGATATGGACTTCAACTA
GAAGGAAAGCCTCCTGCGGATATCGAAAACGTGTCGATATTCCACGACTT
GTCACTTTCTCCCGGAAAAACTAAAGTCTAGGGAAATCCAAATACAAACT
TCCTTCCAGCGAAAGGTTCTGGAAAACGCGAAAAATAAACTCCGGGATAA
TTCCACAAGTTTTCGGAAATATTGTCGCCACATCGGGGACTTTTATACTT
AAGATCCTTACAGCCCGTTGGGTTGCCACCCGCCCTTGAGGATCCGCGTC
CCGTTTAGCCGTGGACGACAACGACAACGACAATTTCTCTGGAACTCAAA
CATATGTTTTCACCTCATTGATTGGTGCCATATCGTGGCGTATGTTTGGG
TGGCCGGGATTTTCCGTATTTTATTGTGGGGATGCCGCCCGCCCCTCTGT
CAGCTCGGTCGATTATACTAATAATATTAATATTTACTATTATTAATAGC
ACGTTCCGCCCGTCTTTCTTCCTTTTGGGGTGTACTCCCAGCACACCGCT
CACATCCTGCCGTTTGGAGTCCTCGCTTCTCCAACCGGGGAGGGGGGTAA
TGCTGTGGGAGTCGAACGAGCCCTCTTGACCTCTTCTGTGCTCGGGCCTC
GTGCTTGTATATGTGCTCTGTGATTCGGGAGAAGAAGCAATCGGAGTTTG
TTCTCCATCCCTCGGGACAAACACCAACTGTCTTGATCTCGAAAGCCATC
ATCACTACCAAGATTTTTCGATTTCTCATTTTTTCAAAACTTCTGCCCAC
CAGGAGTGAAGATTTACCAGTACACCACATCATGTCTTCTTTCCTTAGGT
CGGGAAGGGAGGGGATTGAGCTCTATTTTCTGTTGGTCGCGACATTATTG
CCCCGCGTGCACGATGGTGTCTTCTCGATTAAAGTCAGAGCGCTTCGCTC
GCTTGACTCCTAGGGTCTAAAGTGGCAACGCCTTCGGTCAGGGTGGTCGG
GGTAGATACACACGGCCAAAAACAGATCTCGTGCGACCCTTATTATATTT
TCGCTCTAATTGCTCGCTGAATCAGGTTTCGGGGGTAAGGTGGAAGCCGG
AGAGACTGTGGAGGAGGCGGCCAAGCGGGAGTTGTTAGAGGAAGCCGGCG
TTACTGCGCAGCGGCTATCCTTGAGAGGGCAGCTGACCTTCAACGTGCCC
TCGTATCCCTCCACCATGGTGATTGAGTGCCAAGCGCCCTGCGGGTATTA
GGGTAGGTCTGGACCGGTAGAACACGCGACAGGTTGAAAGGTTCGACGCG
GAATTGTGCACAGATGCCCCGGTCGCGTAGCGAAGCCTAGTAAAACCAAA
GTATTTAATCGCACTTCATCTCATGTTTGCTCTGTTATTGTAACGGCACG
CTGTGTTCCAATTGCAGCGGGTGTTCGTGTACGAGGCGGTTTCGTACGTG
GGGGAGCCTAGAGAGTCGGAGGAGATGCGACCTCGGTGGTTCAGGGAGAC
TGATCTACCTTTCAAGGTGACAAATGCGCCAGGCACACGCACAGTACTAT
ACTGTATGCCCATTCGTTATATTGCTTCCAACTGGTGGATATCGAACGCA
TGTAGAGGCCACGCTTTGACTTTGGTGATTCCCCAACCGAAAAGGCGCCG
GGCAGGGCAAGGCAAGGCTTGAATCGTGTACCAGAGGTGGATACTGTAGA
CTATCGTATTATTACTTTCATATCGAATATAGATAAAATGGTGCAATTCG
ACTTCACCGTCGACGAGGGAAAGGAATGGCTGAATCCTTCTCGCGATAAA
AACAATGGCATGCACCGCAGAAGGAAGGTGGATGAGAAATCCTGTGTGAG
CCTGGTTGGTACATCCAAGGAACTTGACGTCCAGAATAAATGAGAAGAAA
ACACAAAAGCATGGAGTAAAAAAACGCCAAAGCGCCAGCGCCAACGCTTT
CATGTCTCTGCACAGGAGATGTGGGCTGATGACGAGCACTGGATGCCGCT
GTTCCTGGCCGGAAAGTTCTTCCAGGGAGAGTTCGATTTCTCCGACGAAC
AGACGATTATCGACTACAAATTGCGGGATTTACCATCGGCAGAAACGATA
CAAGAGATTGCATCGACATCGACATCGACATAGAACGTTTGGGGATAGGG
ATGAAAGGGATGAAAGGTTAAGGTTTGGGGGAGAGGGGAGGGGAGGAGAG
GAGAGCTTTTATCACTTCTTTTAATAGCACAGGAGAGCTTTATTTCAGTA
GCCTTTTCAAAAAAGTAAGTATATAATACCTGTGGCCCTCACAACCAAAA
AAATACGAGTACTGTACCAGGTATGTATATA
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Coding sequence (CDS) from alignment at F-serratus_M_contig12:936664..943594+

>mRNA_F-serratus_M_contig12.1557.1 ID=mRNA_F-serratus_M_contig12.1557.1|Name=mRNA_F-serratus_M_contig12.1557.1|organism=Fucus serratus male|type=CDS|length=1434bp|location=Sequence derived from alignment at F-serratus_M_contig12:936664..943594+ (Fucus serratus male)
ATGTCGTGCAAGGCAATTGTTGTGTGTCTCTCTTTCCATCTAATACAGTC
AGACTCTCTCCTGATCCGACCACCAACGCACCAAGCAACCGCTCGTCTGC
AGCTATCCGTGCTGAGTGCTTCACATGTCGTGCAAGGCAATTGTTGTGTG
TCTCTCTTTCCATCTAATACAGTCAGACTCTCTCCTGATCCGACCACCAA
CGCACCAAGCAACCGCTCGTCTGCAGCTATCCGTGCTGAGTGCTTCACCT
TGTCACTTCCAGGCCAACGAGCGTGGGGCGAGTTTGATGGCTGCTCCAAA
AGAGGGGAAGAAGTTGAAGGAGCTCACGCTGGTGTTCTGCAGGCGAACAT
CGTCGAGCTCTGTTGATGACGGCTGCAACGAGCTGCTCTTGGGGCTCAAG
AAGCGGGGCTTTGGAGAGGGGAAGTGGAATGCTTGTCACTTCCAGGCCAA
CGAGCGTGGGGCGAGTTTGATGGCTGCTCCAAAAGAGGGGAAGAAGTTGA
AGGAGCTCACGCTGGTGTTCTGCAGGCGAACATCGTCGAGCTCTGTTGAT
GACGGCTGCAACGAGCTGCTCTTGGGGCTCAAGAAGCGGGGCTTTGGAGA
GGGGAAGTGGAATGGTTTCGGGGGTAAGGTGGAAGCCGGAGAGACTGTGG
AGGAGGCGGCCAAGCGGGAGTTGTTAGAGGAAGCCGGCGTTACTGCGCAG
CGGCTATCCTTGAGAGGGCAGCTGACCTTCAACGTGCCCTCGTATCCCTC
CACCATGGTTTCGGGGGTAAGGTGGAAGCCGGAGAGACTGTGGAGGAGGC
GGCCAAGCGGGAGTTGTTAGAGGAAGCCGGCGTTACTGCGCAGCGGCTAT
CCTTGAGAGGGCAGCTGACCTTCAACGTGCCCTCGTATCCCTCCACCATG
CGGGTGTTCGTGTACGAGGCGGTTTCGTACGTGGGGGAGCCTAGAGAGTC
GGAGGAGATGCGACCTCGGTGGTTCAGGGAGACTGATCTACCTTTCAAGC
GGGTGTTCGTGTACGAGGCGGTTTCGTACGTGGGGGAGCCTAGAGAGTCG
GAGGAGATGCGACCTCGGTGGTTCAGGGAGACTGATCTACCTTTCAAGGA
GATGTGGGCTGATGACGAGCACTGGATGCCGCTGTTCCTGGCCGGAAAGT
TCTTCCAGGGAGAGTTCGATTTCTCCGACGAACAGACGATTATCGACTAC
AAATTGCGGGATTTACCATCGGCAGAAACGATACAAGAGATTGCATCGAC
ATCGACATCGACATAGGAGATGTGGGCTGATGACGAGCACTGGATGCCGC
TGTTCCTGGCCGGAAAGTTCTTCCAGGGAGAGTTCGATTTCTCCGACGAA
CAGACGATTATCGACTACAAATTGCGGGATTTACCATCGGCAGAAACGAT
ACAAGAGATTGCATCGACATCGACATCGACATAG
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