mRNA_F-serratus_M_contig117.1400.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig117.1400.1
Unique NamemRNA_F-serratus_M_contig117.1400.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig117.1400.1 vs. uniprot
Match: A0A6H5KF67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF67_9PHAE)

HSP 1 Score: 382 bits (981), Expect = 1.720e-126
Identity = 208/331 (62.84%), Postives = 244/331 (73.72%), Query Frame = 3
Query:  129 VKSTAAPDVCKVEDSPATCRELGGKYRGGASAVADAVENTSLNVIKILLQMCLTTINVVCWLVPMKIRSFVESKRAISLANAFSGGIFLSLAFGHMIPHSVHGFEGSGLPENLPYFLTLSGYMLIFFVEKIAFDAHHIMHES---GNEHHGVGSASTNDGKVSV--------GAEVPTSSGRSAMILLVALGVHALMETMALGLTSXXXXXXXXXXXXXXXXXXXXXXLLVSFLKSGLTEKQIITMLSVFSCIGPVGVVIGIAVSEFFGQLADAIMMALAAGTFIYVGATEVIAEEFENPENKWKKFLSLSGGIVIIAFVTHWAESLEGRA 1088
             ++ AA DVC V DSPATCREL  KYRGGA+A +   E  SLNV+KILLQMCLTT+NVVCWLVPMKIRSFVESKRAIS+ANAFSGG+FLSLAFGH++PH+ HGFE +GLP N+PYFLTLSGYMLIFFVEK+AFDAH IMHE    G + HG G A  +   V+                        L+ALGVHALMETMALGL+S                      LLVSFLKSGL+E+Q+I  LS+FSC+GP G+ +GIA+SEF G+LADA+M+A+AAGTFIYVGATEVIAEEFE+P +KWKKF +L+ GI IIA+VTHWAESLE  A
Sbjct:   51 AQAAAATDVCSVGDSPATCRELTAKYRGGAAATSGG-EKMSLNVMKILLQMCLTTLNVVCWLVPMKIRSFVESKRAISMANAFSGGVFLSLAFGHLMPHATHGFEEAGLPANVPYFLTLSGYMLIFFVEKVAFDAHSIMHEGDGHGQQQHGGGKAMADGSSVTAVXXXXXXXXXXXXXXXXXXXXXXLLALGVHALMETMALGLSSNRVSAGLLAMSIGLHQPAESLALLVSFLKSGLSERQVIKYLSIFSCLGPAGLGLGIAISEFTGKLADAVMVAMAAGTFIYVGATEVIAEEFESPHDKWKKFFALTAGIFIIAYVTHWAESLEHMA 380          
BLAST of mRNA_F-serratus_M_contig117.1400.1 vs. uniprot
Match: D7G198_ECTSI (ZIP divalent metal transporters n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G198_ECTSI)

HSP 1 Score: 298 bits (763), Expect = 3.790e-95
Identity = 173/291 (59.45%), Postives = 202/291 (69.42%), Query Frame = 3
Query:  249 SLNVIKILLQMCLTTINVVCWLVPMKIRSFVESKRAISLANAFSGGIFLSLAFGHMIPHSVHGFEGSGLPENLPYFLTLSGYMLIFFVEKIAFDAHHIMHES---GNEHHGVGSASTNDGKVSVGAEVPTSSG--------RSAMILLVALGVHALMETMALGLTSXXXXXXXXXXXXXXXXXXXXXXLLVSFLKSGLTEKQIITMLSVFSCIGPVGVVIGIAVSEFFGQLADAIMMALAAGTFIYVGATEVIAEEFENPENKWKKFLSLSGGIVIIAFVTHWAESLEGRA 1088
            SLNV+KILLQ                IRSFVESKRAIS+ANAFSGG+FLSLAFGHM+PH+  GFE SGLP N+PYFLTLSGYMLIFFVEK+AFDAH+IMHE    G + H                               RSA+ILL+ALGVHALMETMALGL+S                      LLVSFLKSGL+E+Q+I  LS+FSC+GP G+ +GIA+SEF G+LADA+M+A+AAGTFIYVGATEVIAEEFE+P +KWKKF +L+ GIVIIA+VTHWAESLE  A
Sbjct:    2 SLNVMKILLQ----------------IRSFVESKRAISMANAFSGGVFLSLAFGHMMPHATLGFEESGLPANVPYFLTLSGYMLIFFVEKVAFDAHNIMHEGDGHGQQQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSAIILLLALGVHALMETMALGLSSNRVSAGLLAMSIGLHQPAESLALLVSFLKSGLSERQVIKYLSIFSCLGPAGLGLGIAISEFAGKLADAVMVAMAAGTFIYVGATEVIAEEFESPHDKWKKFSALTAGIVIIAYVTHWAESLEHMA 276          
BLAST of mRNA_F-serratus_M_contig117.1400.1 vs. uniprot
Match: A0A836CLP2_9STRA (ZIP divalent metal transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLP2_9STRA)

HSP 1 Score: 273 bits (698), Expect = 1.020e-85
Identity = 140/253 (55.34%), Postives = 187/253 (73.91%), Query Frame = 3
Query:  330 RSFVESKRAISLANAFSGGIFLSLAFGHMIPHSVHGFEGSGLPENLPYFLTLSGYMLIFFVEKIAFDAHHIMHESGNEHHGVGSASTNDGKVSVGAEVPTSSGRSAMILLVALGVHALMETMALGLTSXXXXXXXXXXXXXXXXXXXXXXLLVSFLKSGLTEKQIITMLSVFSCIGPVGVVIGIAVSEFFGQLADAIMMALAAGTFIYVGATEVIAEEFENPENKWKKFLSLSGGIVIIAFVTHWAESLEGRA 1088
            R F ESK  IS+ANAFSGG+FLSLAFGHM+PH+ HGFE SGLPE+ P++LTL+GY+LIFFVEKIAFD H ++H++ +   G  S ST     S  +    +SGRSA +LL+AL VH+L ETMALGL++                      LLVSFLK+GL + +I+ ML++FSC+GP+GV +G+A +++ G L DA++++LAAGTF+YVGATEV+A+EFE P +KWKKF +L GG+V+IA++T WAE LEGRA
Sbjct:    2 RRFTESKVGISMANAFSGGVFLSLAFGHMLPHAAHGFENSGLPESTPFYLTLTGYLLIFFVEKIAFDTHEMLHDAHDN--GPQSPSTIKPIDSSNSAQVAASGRSATVLLLALSVHSLFETMALGLSTSRLNALLLAMSIGLHQPAESLALLVSFLKTGLPQGKIVKMLALFSCVGPLGVGLGVAAAQYAGDLVDAVLVSLAAGTFVYVGATEVVADEFETPHHKWKKFAALLGGVVLIAYITSWAELLEGRA 252          
BLAST of mRNA_F-serratus_M_contig117.1400.1 vs. uniprot
Match: A0A448Z4G5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z4G5_9STRA)

HSP 1 Score: 264 bits (675), Expect = 8.820e-80
Identity = 155/276 (56.16%), Postives = 191/276 (69.20%), Query Frame = 3
Query:  264 KILLQMCLTTINVVCWLVPMKIRSFVESKRAISLANAFSGGIFLSLAFGHMIPHSVHGFEGSGLP---ENLPYFLTLSGYMLIFFVEKIAFDAHHIMHESGNEHHGVGSASTNDGKVSVGAEVPTS--SGRSAMILLVALGVHALMETMALGLTSXXXXXXXXXXXXXXXXXXXXXXLLVSFLKSGLTEKQIITMLSVFSCIGPVGVVIGIAVSEFFGQLADAIMMALAAGTFIYVGATEVIAEEFENPENKWKKFLSLSGGIVIIAFVTHWAESL 1076
            KIL Q  LTTINVVCWLVP++ +SF E+K A+SLANAFSGGIFLSLAFGHMIP  VH +  S +    E  PY L LSGY+LIFFVEK+AFDAH IMHE      G  S   N    S G++  T+  +GRSAMILL ALGVH+++E MALGL+          X            LLV+FLKSG+ +K IIT LSVFS +GP+GV +G+AV+EF   + DAIM+A+ AGTF+YVGATEVI EE+E+ E+KWKKF +L GGIV I  +T +  +L
Sbjct:  165 KILFQAFLTTINVVCWLVPLRSKSFGENKLALSLANAFSGGIFLSLAFGHMIPECVHEYAASAVGDYNEATPYMLVLSGYLLIFFVEKVAFDAHEIMHEMEQ---GGQSDDGNAVSKSSGSDATTTKNTGRSAMILLAALGVHSILEMMALGLSDSFSDSAILTXSIALHQPAESIALLVAFLKSGMPKKDIITFLSVFSAMGPIGVXLGMAVNEFAAPIVDAIMLAVVAGTFVYVGATEVIPEEWEDSEHKWKKFFALMGGIVSIFAITQYTMTL 437          
BLAST of mRNA_F-serratus_M_contig117.1400.1 vs. uniprot
Match: B5Y3R5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3R5_PHATC)

HSP 1 Score: 261 bits (668), Expect = 8.880e-79
Identity = 146/285 (51.23%), Postives = 190/285 (66.67%), Query Frame = 3
Query:  252 LNVIKILLQMCLTTINVVCWLVPMKIRSFVESKRAISLANAFSGGIFLSLAFGHMIPHSVHGFEGSGLPENLPYFLTLSGYMLIFFVEKIAFDAHHIMHE-SGNEHHGVGSASTNDG---KVSVGAEVPTS--SGRSAMILLVALGVHALMETMALGLTSXXXXXXXXXXXXXXXXXXXXXXLLVSFLKSGLTEKQIITMLSVFSCIGPVGVVIGIAVSEFFGQLADAIMMALAAGTFIYVGATEVIAEEFENPENKWKKFLSLSGGIVIIAFVTHWAESLEGRA 1088
            LN  K++ Q  LT INV+CWLVP++ +   E+K A+SLANAFSGG+FLSLAFGH+IP  +HGFE S   E  P+ L L+GY+LIFFVEK+AFDAH I+HE  G++HH             K S G E  +S  SGRSA+ILL AL VH+++E MALGL                        LLV+FLKSG+ E QII  LS+FSC+GP+GV +G+AV+EF   + D++M+A+ AGTF+YVGATEVI EE+E+  +KWKKF +L  GIV I  +T +  SL G +
Sbjct:  151 LNAWKVIFQAILTAINVICWLVPLRSKKMSENKLALSLANAFSGGVFLSLAFGHLIPECIHGFEASTYAETTPFMLVLAGYLLIFFVEKVAFDAHDILHEMQGDDHHXXXXPDXXXXXXKKSSGGTEAASSLSSGRSAVILLGALAVHSILEMMALGLADTFGDCALLTMSISLHQPAESIALLVAFLKSGVPEAQIIQYLSIFSCMGPIGVALGMAVNEFAAPIVDSMMLAVVAGTFVYVGATEVIPEEWEDSTHKWKKFAALMSGIVSIFVITQYTMSLGGHS 435          
BLAST of mRNA_F-serratus_M_contig117.1400.1 vs. uniprot
Match: A0A7S1YY76_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YY76_TRICV)

HSP 1 Score: 253 bits (646), Expect = 7.220e-76
Identity = 157/338 (46.45%), Postives = 203/338 (60.06%), Query Frame = 3
Query:  144 APDVCKVEDSPATCRELGGKYRG-------GASA--------VADAVENTSLNVIKILLQMCLTTINVVCWLVPMKIRSFVESKRAISLANAFSGGIFLSLAFGHMIPHSVHGFEGSGLPENLPYFLTLSGYMLIFFVEKIAFDAHHIMH-------ESGNEHHG----VGSASTNDGKVSVGAEVPTSSGRSAMILLVALGVHALMETMALGLTSXXXXXXXXXXXXXXXXXXXXXXLLVSFLKSGLTEKQIITMLSVFSCIGPVGVVIGIAVSEFFGQLADAIMMALAAGTFIYVGATEVIAEEFENPENKWKKFLSLSGGIVIIAFVTHWAESLE 1079
            A D C  E  PA     GG   G       GA+A          D      LN+ K++ Q  LTT+NV+CWL+P++      +K A+SLANAFSGG+FLSLAFGH+IP  VHGF G    E LPY L L GY+LIFFVEK+AFDAH +MH       E G+  HG    V + ++N    + G E    SGRSA+ILL AL VH+++E  ALGL +                      LLV+FLKSG+ + QI+  LS+FS +GPVGV IG+AV+EF   + DAIM+A+ AGTF+YVGATEVI EE+E P++KWKKF +L  GIV I  +T +  +L+
Sbjct:   68 ALDECMAEHCPACLTVRGGAAEGPPLGGVGGAAAEXXXXXXXXXDLPLGLPLNLWKVIFQAMLTTMNVLCWLIPLRSEKISSNKLALSLANAFSGGVFLSLAFGHLIPECVHGF-GPEYNEALPYMLVLGGYLLIFFVEKVAFDAHGLMHAGEEGHDERGHHTHGKEKAVSNGTSNKDDAAEGGE-GLGSGRSAVILLGALAVHSVLEMTALGLANTFGESALLSLSIALHQPAESIALLVAFLKSGMPKPQIVQYLSIFSAMGPVGVAIGMAVNEFAAPIVDAIMLAIVAGTFVYVGATEVIPEEWEEPDHKWKKFAALISGIVSIFAITQYTMTLD 403          
BLAST of mRNA_F-serratus_M_contig117.1400.1 vs. uniprot
Match: A0A1Z5JFF0_FISSO (Solute carrier family 39 (Zinc transporter), member 1/2/3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JFF0_FISSO)

HSP 1 Score: 253 bits (645), Expect = 1.310e-75
Identity = 141/301 (46.84%), Postives = 192/301 (63.79%), Query Frame = 3
Query:  204 YRGGASAVADAVENTSLNVIKILLQMCLTTINVVCWLVPMKIRSFVESKRAISLANAFSGGIFLSLAFGHMIPHSVHGFEGSGLPENLPYFLTLSGYMLIFFVEKIAFDAHHIMHESGNEHHGVGS------ASTNDGKVSVGAEVPTSSGRSAMILLVALGVHALMETMALGLTSXXXXXXXXXXXXXXXXXXXXXXLLVSFLKSGLTEKQIITMLSVFSCIGPVGVVIGIAVSEFFGQLADAIMMALAAGTFIYVGATEVIAEEFENPENKWKKFLSLSGGIVIIAFVTHWAESLEGRA 1088
            +   ++ +A       LN  K++ Q  LTT+NV+CWL+P+K +   ++K A+S+ANAFSGG+FLSLAFGH+IP  VHGF  + LPE  PY L L+GY+LIFFVEK+AFDAH I+HE   E             +T + K  V    P  SGR A+ILL AL VH+++E MALGL +                      LLV+FLKSG+ E Q++  LS+FSC+GP+GV +G+AVSE+   + D+IM+A+ AGTF+YVGATEVI EE+E+  +KW KF +L GGI  I  +T +  SL G +
Sbjct:  120 HDAASALIATTPLGLPLNSWKVIFQALLTTMNVLCWLIPLKSKKISQNKFALSMANAFSGGVFLSLAFGHLIPECVHGF--ANLPEETPYLLVLAGYLLIFFVEKVAFDAHEILHEMQGEGXXXXXXXXXQVVNTKESKQEV---TPAGSGRGAVILLGALAVHSVLEMMALGLANNFGDCALLTLSISLHQPAESIALLVAFLKSGMPEDQVLKYLSIFSCMGPIGVALGMAVSEYAAPIVDSIMLAVVAGTFVYVGATEVIPEEWEDGHHKWAKFAALMGGIGSILVITQYTASLGGHS 415          
BLAST of mRNA_F-serratus_M_contig117.1400.1 vs. uniprot
Match: A0A1E7FJQ0_9STRA (Zinc/iron permease n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FJQ0_9STRA)

HSP 1 Score: 247 bits (630), Expect = 6.190e-75
Identity = 146/298 (48.99%), Postives = 187/298 (62.75%), Query Frame = 3
Query:  243 NTSLNVIKILLQMCLTTINVVCWLVPMKIRSFVESKRAISLANAFSGGIFLSLAFGHMIPHSVHGFEGS------GLPEN--LPYFLTLSGYMLIFFVEKIAFDAHHIMHE------------SGNEHHGVGSASTNDGKVSVGAEVPTSSGRSAMILLVALGVHALMETMALGLTSXXXXXXXXXXXXXXXXXXXXXXLLVSFLKSGLTEKQIITMLSVFSCIGPVGVVIGIAVSEFFGQLADAIMMALAAGTFIYVGATEVIAEEFENPENKWKKFLSLSGGIVIIAFVTHWAESL 1076
            N  LN  KI+ Q  LT +NVVCWLVP+K +SF E+K A+SLANAFSGG+FLSLAFGH+IP  VHGF  +      GL  N   PY L LSGYMLIFFVEK+AFDAH  +HE              N+ +GV    + D +         +SGRSA+ILL AL VH+++E  ALGL+                       LLV+FLKSG+ + QII  LS+FS +GP+G  +GI V+EF   + D+IM+A+ AGTF+YVGATEVI EEFE+ +NKWKKF +L  GI+ I  +T +  +L
Sbjct:    4 NIPLNGWKIIFQTFLTILNVVCWLVPLKSKSFGENKLALSLANAFSGGVFLSLAFGHLIPECVHGFSSNTGGLVGGLMSNEATPYMLVLSGYMLIFFVEKVAFDAHGALHEMEHAQDNTNKVKGNNKKNGVAHTHSKDAQ-------QQNSGRSAVILLAALAVHSILEMAALGLSDTFSDSALLTVSIALHQPAESIALLVAFLKSGMPKNQIIVFLSIFSLMGPIGCGLGIVVNEFADPIVDSIMLAVVAGTFVYVGATEVIPEEFEDSDNKWKKFTALMSGIISIFAITQYTMTL 294          
BLAST of mRNA_F-serratus_M_contig117.1400.1 vs. uniprot
Match: A0A6S9APD7_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9APD7_9STRA)

HSP 1 Score: 251 bits (641), Expect = 2.250e-74
Identity = 160/333 (48.05%), Postives = 202/333 (60.66%), Query Frame = 3
Query:  123 LEVKSTAAPDVCKVEDSPATCRELGGKYRGGASAVADAVENTS------LNVIKILLQMCLTTINVVCWLVPMKIRSFVESKRAISLANAFSGGIFLSLAFGHMIPHSVHGFEGSGLPENLPYFLTLSGYMLIFFVEKIAFDAHHIMHE----SGNEHHGVGSASTNDGKVSVGAE---VPTSSGRSAMILLVALGVHALMETMALGLTSXXXXXXXXXXXXXXXXXXXXXXLLVSFLKSGLTEKQIITMLSVFSCIGPVGVVIGIAVSEFFGQLADAIMMALAAGTFIYVGATEVIAEEFENPENKWKKFLSLSGGIVIIAFVTHWAESLEG 1082
            L   +TAA D C     P             AS  ADAV  T+      LN+ KIL Q+ LTT NVV WL+P++     ++K A+ LANAFSGG+FLSLAFGH+IP  VHGF G    E LPY + L GY+LIFFVEK+AFDAH  +HE    S N  H V     N G V+   +     ++SGRSA+ILL AL VH+++E MALGL                        LLV+FLKSG+ + QII  LSVFS +GP+GV +G+AV+EF   + D+IM+A  AGTFIYVGATEVI EE+E+ E+KWKKF +L  GIV I  +T +  +LEG
Sbjct:  142 LPCMNTAALDAC--ASVPRGGHIANTAAAAAASTAADAVAQTTTPYGIPLNMWKILFQIFLTTTNVVFWLLPLRFSKISDNKVALGLANAFSGGVFLSLAFGHLIPECVHGFAGD-YNEALPYMIVLGGYLLIFFVEKVAFDAHGALHEMEGGSCNNGHDV---KMNGGDVANSDDSDPAASNSGRSAVILLGALAVHSILEMMALGLAKTFGDSALLTLSIALHQPAESIALLVAFLKSGMPKGQIIRFLSVFSAMGPIGVALGMAVNEFAAPIVDSIMLATVAGTFIYVGATEVIPEEWEDQEHKWKKFFALITGIVSIFAITQYTTTLEG 468          
BLAST of mRNA_F-serratus_M_contig117.1400.1 vs. uniprot
Match: A0A6S8XAZ7_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8XAZ7_9STRA)

HSP 1 Score: 251 bits (641), Expect = 6.840e-74
Identity = 147/315 (46.67%), Postives = 193/315 (61.27%), Query Frame = 3
Query:  210 GGASAVADAVE-------NTSLNVIKILLQMCLTTINVVCWLVPMKIRSFVESKRAISLANAFSGGIFLSLAFGHMIPHSVHGFEGSGLPENLPYFLTLSGYMLIFFVEKIAFDAHHIMHESGNEHHGVGSASTNDGKVSVG-----------------AEVPTSSGRSAMILLVALGVHALMETMALGLTSXXXXXXXXXXXXXXXXXXXXXXLLVSFLKSGLTEKQIITMLSVFSCIGPVGVVIGIAVSEFFGQLADAIMMALAAGTFIYVGATEVIAEEFENPENKWKKFLSLSGGIVIIAFVTHWAESLEG 1082
            G ASA A  +        N  LN+ K++ Q+ LT +NV CWL+P++ +   E+K A+ +ANAFSGG+FLSLAFGH+IP  +HGFEG+GL E LPY + L GY+LIFFVEK+AFDAH +MH  G    G GS   +  +V V                  A    ++GRSA+ILL AL VH+++E  ALGL                        LLV+FLKSG+ +  II  LSVFS +GPVGV IG+AV+ F   + D+IM+A  AGTFIYVGATEVI EE+E+ E+KW KF +L  GI+ I  +T +  +LEG
Sbjct:  201 GAASAAAQTISSAMPTPYNIPLNMWKVIFQIFLTAMNVACWLIPLRAKKITENKYALGIANAFSGGVFLSLAFGHLIPECIHGFEGTGLNEALPYMIVLGGYLLIFFVEKVAFDAHGLMHGCGP---GDGSGDEHGKEVVVKKDXXXXXXXXXXGDTATATATANNGRSAVILLGALAVHSILEMTALGLARTFGDSALLSLSIALHQPAESIALLVAFLKSGMPKSDIIKYLSVFSAMGPVGVAIGMAVTSFAAPIVDSIMLATVAGTFIYVGATEVIPEEWEDQEHKWPKFFALMCGIISIFGITQYTMTLEG 512          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig117.1400.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KF67_9PHAE1.720e-12662.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G198_ECTSI3.790e-9559.45ZIP divalent metal transporters n=1 Tax=Ectocarpus... [more]
A0A836CLP2_9STRA1.020e-8555.34ZIP divalent metal transporter n=1 Tax=Tribonema m... [more]
A0A448Z4G5_9STRA8.820e-8056.16Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
B5Y3R5_PHATC8.880e-7951.23Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S1YY76_TRICV7.220e-7646.45Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A1Z5JFF0_FISSO1.310e-7546.84Solute carrier family 39 (Zinc transporter), membe... [more]
A0A1E7FJQ0_9STRA6.190e-7548.99Zinc/iron permease n=1 Tax=Fragilariopsis cylindru... [more]
A0A6S9APD7_9STRA2.250e-7448.05Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A6S8XAZ7_9STRA6.840e-7446.67Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig117contigF-serratus_M_contig117:663955..667061 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score261.5
Seed ortholog evalue4.2e-67
Seed eggNOG ortholog2850.Phatr46780
KEGG koko:K14709
KEGG TC2.A.5.1,2.A.5.3,2.A.5.6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ZIP Zinc transporter
EggNOG OGs2XF5Z@2836,KOG1558@1,KOG1558@2759
COG Functional cat.P
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons6
Model size1478
Cds size813
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig117.1400.1prot_F-serratus_M_contig117.1400.1Fucus serratus malepolypeptideF-serratus_M_contig117 664651..666674 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929074.8527439-UTR-F-serratus_M_contig117:663954..6641701622929074.8527439-UTR-F-serratus_M_contig117:663954..664170Fucus serratus maleUTRF-serratus_M_contig117 663955..664170 +
1690962693.9034474-UTR-F-serratus_M_contig117:663954..6641701690962693.9034474-UTR-F-serratus_M_contig117:663954..664170Fucus serratus maleUTRF-serratus_M_contig117 663955..664170 +
1622929074.8665843-UTR-F-serratus_M_contig117:664588..6646501622929074.8665843-UTR-F-serratus_M_contig117:664588..664650Fucus serratus maleUTRF-serratus_M_contig117 664589..664650 +
1690962693.917686-UTR-F-serratus_M_contig117:664588..6646501690962693.917686-UTR-F-serratus_M_contig117:664588..664650Fucus serratus maleUTRF-serratus_M_contig117 664589..664650 +
1622929074.9337945-UTR-F-serratus_M_contig117:666674..6670611622929074.9337945-UTR-F-serratus_M_contig117:666674..667061Fucus serratus maleUTRF-serratus_M_contig117 666675..667061 +
1690962693.9740121-UTR-F-serratus_M_contig117:666674..6670611690962693.9740121-UTR-F-serratus_M_contig117:666674..667061Fucus serratus maleUTRF-serratus_M_contig117 666675..667061 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929074.8790693-CDS-F-serratus_M_contig117:664650..6647801622929074.8790693-CDS-F-serratus_M_contig117:664650..664780Fucus serratus maleCDSF-serratus_M_contig117 664651..664780 +
1690962693.926304-CDS-F-serratus_M_contig117:664650..6647801690962693.926304-CDS-F-serratus_M_contig117:664650..664780Fucus serratus maleCDSF-serratus_M_contig117 664651..664780 +
1622929074.89059-CDS-F-serratus_M_contig117:665236..6655891622929074.89059-CDS-F-serratus_M_contig117:665236..665589Fucus serratus maleCDSF-serratus_M_contig117 665237..665589 +
1690962693.9349153-CDS-F-serratus_M_contig117:665236..6655891690962693.9349153-CDS-F-serratus_M_contig117:665236..665589Fucus serratus maleCDSF-serratus_M_contig117 665237..665589 +
1622929074.89987-CDS-F-serratus_M_contig117:665883..6659861622929074.89987-CDS-F-serratus_M_contig117:665883..665986Fucus serratus maleCDSF-serratus_M_contig117 665884..665986 +
1690962693.945383-CDS-F-serratus_M_contig117:665883..6659861690962693.945383-CDS-F-serratus_M_contig117:665883..665986Fucus serratus maleCDSF-serratus_M_contig117 665884..665986 +
1622929074.9116387-CDS-F-serratus_M_contig117:666253..6664181622929074.9116387-CDS-F-serratus_M_contig117:666253..666418Fucus serratus maleCDSF-serratus_M_contig117 666254..666418 +
1690962693.9552426-CDS-F-serratus_M_contig117:666253..6664181690962693.9552426-CDS-F-serratus_M_contig117:666253..666418Fucus serratus maleCDSF-serratus_M_contig117 666254..666418 +
1622929074.9227998-CDS-F-serratus_M_contig117:666612..6666741622929074.9227998-CDS-F-serratus_M_contig117:666612..666674Fucus serratus maleCDSF-serratus_M_contig117 666613..666674 +
1690962693.9648113-CDS-F-serratus_M_contig117:666612..6666741690962693.9648113-CDS-F-serratus_M_contig117:666612..666674Fucus serratus maleCDSF-serratus_M_contig117 666613..666674 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig117.1400.1

>prot_F-serratus_M_contig117.1400.1 ID=prot_F-serratus_M_contig117.1400.1|Name=mRNA_F-serratus_M_contig117.1400.1|organism=Fucus serratus male|type=polypeptide|length=271bp
MCLTTINVVCWLVPMKIRSFVESKRAISLANAFSGGIFLSLAFGHMIPHS
VHGFEGSGLPENLPYFLTLSGYMLIFFVEKIAFDAHHIMHESGNEHHGVG
SASTNDGKVSVGAEVPTSSGRSAMILLVALGVHALMETMALGLTSSKMSA
GLLAMSIGLHQPAESLALLVSFLKSGLTEKQIITMLSVFSCIGPVGVVIG
IAVSEFFGQLADAIMMALAAGTFIYVGATEVIAEEFENPENKWKKFLSLS
GGIVIIAFVTHWAESLEGRA*
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mRNA from alignment at F-serratus_M_contig117:663955..667061+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig117.1400.1 ID=mRNA_F-serratus_M_contig117.1400.1|Name=mRNA_F-serratus_M_contig117.1400.1|organism=Fucus serratus male|type=mRNA|length=3107bp|location=Sequence derived from alignment at F-serratus_M_contig117:663955..667061+ (Fucus serratus male)
ATGGGGATTCGAAACATAGGGTTAGTTATTTTGTGGCTGGTGGCCTCTGG AGAGGGATTCCGCATCAATATACCCGGCACGAAGCATGATGCAAAAGGAG GGCAAGGGGCAAGAGAGGTCGTCTGGAGGTCAAGTCTACAGCCGCTCCGG ACGTGTGCAAGGTCGAAGATTCGCCGGCAACGTGCCGAGAGCTGGGGGGG AAGTACAGAGGAGGAGGTAAGAAATCTATGGATCGATTAGCTGTTGGTCG TGGTTTGTTCTACCGGGGATATCGCAGAAGCACAGTTACAACGGGAAGTC GGCAGCACAGAAATGCAGCTGCGCGTACCAAATAGACTAGAGACGCGGTC CAGACTCTTTTGTTTGTATCGATAGTCATACCTGCGAAGAACGCGTGGAA GTCTCAAGTTCCCAGACAGATAGATGAAGAAAATATGAAGAAACGGGATG GGCGTTCGACTATTTGCTCGTTGGGGGGCAATCTTCGTCAGCGCTATCTA CCTTTCATTCCGACAAGCGGTCCCCTTTGCTGCGGAGAAATGTTTCCTTG ATATTGTGGTTGGTGATTATTGCCGTAGTAATGACGTTGTCGTCGCCTCT GGGTGGGGTTCGTTGTACGCTGCCCCCCTGTCAGCCTCGGCAGTGGCGGA TGCGGTGGAAAACACGAGCCTCAACGTGATCAAGATCCTCTTGCAGATGT GCCTCACCACCATCAACGTCGTGTGCTGGCTGGTGCCCATGAAGATTCGA AGCTTCGTGGAGTCGAAGAGAGCCATCAGCTTGGCAAATGCTTTCAGCGG TGGTATATTTCTGTCGCTAGCCTTTGGTGAGTGGGGGTGGATCTTAGACA AGCTTTTCGCCGCAGTGTCGAGAACAGATTGACCACGGTTTCGTCAAAAA TCCTCGCCGCGGTATTTGCCAGCACCACCACGAGCAAAATGTCGAGTTTT CCATCAAGGTAGAACTTCGAGACATCAACTAAACGGCGTTTCCCTCTTTC TAGCATTTGCAGGTTTGTAAAGAGCATCAGGGCGTGAACTAAATGACCAT GCCTTTACGAGTAATACTTCCTTACCAAACTCATAGAAGGTGCCCATTGC TCAGCATTTGGACCTTGGTGCCTGAGCCGCACACCGGATGGAGAGCAGGC GTTCCTGCCCGCTACACTCCCACCGTGTGAATGTCAATGTCAACCTGAGC CTCCTAGCGTGACTCCCGCTTGCTGTTTTGAAATTGTAGCCCTCGAACGT TTTTTTTCTCTGTGATATTATCCGGAATCCAGGCCACATGATCCCCCACT CCGTACACGGGTTCGAGGGCTCGGGACTGCCGGAGAACCTCCCGTACTTC CTCACGCTGTCGGGTTATATGCTCATATTTTTTGTCGAAAAGATCGCTTT TGATGCACACCACATCATGCACGAGTCGGGGAATGAACACCACGGTGTCG GCAGCGCTAGCACGAACGACGGCAAAGTTTCTGTTGGCGCCGAGGTGCCG ACCTCGAGCGGCCGTTCGGCGATGATCCTTCTGGTGGCGCTAGGGGTGCA CGCGTTGATGGAGACCATGGCCCTGGGGTTGACCTCGAGCAAGATGAGCG CCGGGCTCCTCGCCATGAGCATTGGGCTTCACCAGGTCAGAAGGGTCATC TCGGCCTGCTTGCGGGGTTGTGGGTACTCGGTCGATGTTACCGCAAAAAA ACAGGAATTGATCCATTGGCAGAGAGACCTCTTGCCTTGAAAGGCCAATG ATTTTGATAGCGTTCACTGATCCGTTGGCAGAGGCCCGTGCCTCGAAAGG CCAAAGATTTTGATAAGATTCGCTTAATTGTCATAGATATCTATGCCAGA CTCGACCTGCCCTCACCCAAGCCGTTACGACCCGTAACTCTACCTGTTTG CCGATTCTCCTACCATGACGGCTACGCAGCCGGCGGAGTCGCTGGCGCTG CTTGTTTCGTTCTTGAAGTCGGGGCTGACGGAGAAGCAGATAATCACGAT GCTTTCAGTTTTCAGTTGTATTGGACCTGTAGGTGAGTCGAGTCGAGTCG AGTCGACCTGAGAGTACTTATTATATCCTGTGGAAATGAGCGTACAGGTA GAGTTGTACCGTGAGGCATAGTGTACGTATTCGAAGTGTACATCTTCCGC TCCACGCTTCGCTATGCGGATCCTTACCAAGAGCCAGGAAGTCCTTATCG TCGTGGGAGCGGGGCACAAAAAATAACATGCCAAAACATTTGATTCTTCC GCACGACCCGCCGTTGCGCGTATGCTTGCGCGACTGTGCCCATGAAAAGG GGTGGTTATTGGCATCGCTGTCTCGGAGTTCTTCGGGCAACTCGCGGACG CCATCATGATGGCGTTGGCGGCAGGGACGTTCATCTACGTCGGAGCAACG GAGGTCATCGCGGAAGAGTTCGAGAACCCTGAAAACAAGTGGAAGAAGTT TTTATCACTTTCAGGTATGTGCTGTGCTGTATTCTGTGCGCTCTATGTAT CAATACCAAGAGATGGCTATCAATAGATGCTGGCCTCGGATGGTCGGGAT ACCAAAGAAACAGGACACGGCAGAGTAGCCTCGCGTTTGATGGTTTCGCT GCCCTGCTGCTTGTTGTCTCATCCTTCCTTCTCGTCGCAACCGCCGCTGC ATACTCAGGCGGGATCGTAATCATCGCGTTCGTGACACACTGGGCGGAGT CCCTAGAGGGTAGAGCGTGATCGTTTGAATCCGCCCGCAAGCTCTCGCAG CATCGAGGTTGGCTTCCGTTCGAGTGAATTGCGGATTGACCTCAGCAGCT TATCGGTGTCGGCAGATTTTGCTGCGGGGACGTCCGCATTTGCCGTACAT CCTGAATCAATTTCCCATACATTTACATCAGATTGCGATCGAACGCATGC TGTCAAGGTGCAGTGATACCCTTCAGGTTGTCACCTGCGAGTTGGGTGGG ATATAATGTCAGGGAACCTACTAGGCTGTCTCTTGCCTCGTGTGATCGAG CGACCAAAACCCTAGGTTGGCCTTCCCTCCGAACATGACAAGAGTCAAGA TACATGTTGCAGGCTGACGCGGAGAACCGATAAACTGTGTCGGTTGGACG ACTAGCG
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Coding sequence (CDS) from alignment at F-serratus_M_contig117:663955..667061+

>mRNA_F-serratus_M_contig117.1400.1 ID=mRNA_F-serratus_M_contig117.1400.1|Name=mRNA_F-serratus_M_contig117.1400.1|organism=Fucus serratus male|type=CDS|length=1626bp|location=Sequence derived from alignment at F-serratus_M_contig117:663955..667061+ (Fucus serratus male)
ATGTGCCTCACCACCATCAACGTCGTGTGCTGGCTGGTGCCCATGAAGAT
TCGAAGCTTCGTGGAGTCGAAGAGAGCCATCAGCTTGGCAAATGCTTTCA
GCGGTGGTATATTTCTGTCGCTAGCCTTTGATGTGCCTCACCACCATCAA
CGTCGTGTGCTGGCTGGTGCCCATGAAGATTCGAAGCTTCGTGGAGTCGA
AGAGAGCCATCAGCTTGGCAAATGCTTTCAGCGGTGGTATATTTCTGTCG
CTAGCCTTTGGCCACATGATCCCCCACTCCGTACACGGGTTCGAGGGCTC
GGGACTGCCGGAGAACCTCCCGTACTTCCTCACGCTGTCGGGTTATATGC
TCATATTTTTTGTCGAAAAGATCGCTTTTGATGCACACCACATCATGCAC
GAGTCGGGGAATGAACACCACGGTGTCGGCAGCGCTAGCACGAACGACGG
CAAAGTTTCTGTTGGCGCCGAGGTGCCGACCTCGAGCGGCCGTTCGGCGA
TGATCCTTCTGGTGGCGCTAGGGGTGCACGCGTTGATGGAGACCATGGCC
CTGGGGTTGACCTCGAGCAAGATGAGCGCCGGGCTCCTCGCCATGAGCAT
TGGGCTTCACCAGGCCACATGATCCCCCACTCCGTACACGGGTTCGAGGG
CTCGGGACTGCCGGAGAACCTCCCGTACTTCCTCACGCTGTCGGGTTATA
TGCTCATATTTTTTGTCGAAAAGATCGCTTTTGATGCACACCACATCATG
CACGAGTCGGGGAATGAACACCACGGTGTCGGCAGCGCTAGCACGAACGA
CGGCAAAGTTTCTGTTGGCGCCGAGGTGCCGACCTCGAGCGGCCGTTCGG
CGATGATCCTTCTGGTGGCGCTAGGGGTGCACGCGTTGATGGAGACCATG
GCCCTGGGGTTGACCTCGAGCAAGATGAGCGCCGGGCTCCTCGCCATGAG
CATTGGGCTTCACCAGCCGGCGGAGTCGCTGGCGCTGCTTGTTTCGTTCT
TGAAGTCGGGGCTGACGGAGAAGCAGATAATCACGATGCTTTCAGTTTTC
AGTTGTATTGGACCTGTAGCCGGCGGAGTCGCTGGCGCTGCTTGTTTCGT
TCTTGAAGTCGGGGCTGACGGAGAAGCAGATAATCACGATGCTTTCAGTT
TTCAGTTGTATTGGACCTGTAGGGGTGGTTATTGGCATCGCTGTCTCGGA
GTTCTTCGGGCAACTCGCGGACGCCATCATGATGGCGTTGGCGGCAGGGA
CGTTCATCTACGTCGGAGCAACGGAGGTCATCGCGGAAGAGTTCGAGAAC
CCTGAAAACAAGTGGAAGAAGTTTTTATCACTTTCAGGGGTGGTTATTGG
CATCGCTGTCTCGGAGTTCTTCGGGCAACTCGCGGACGCCATCATGATGG
CGTTGGCGGCAGGGACGTTCATCTACGTCGGAGCAACGGAGGTCATCGCG
GAAGAGTTCGAGAACCCTGAAAACAAGTGGAAGAAGTTTTTATCACTTTC
AGGCGGGATCGTAATCATCGCGTTCGTGACACACTGGGCGGAGTCCCTAG
AGGGTAGAGCGTGAGCGGGATCGTAATCATCGCGTTCGTGACACACTGGG
CGGAGTCCCTAGAGGGTAGAGCGTGA
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