mRNA_F-serratus_M_contig1155.1278.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1155.1278.1
Unique NamemRNA_F-serratus_M_contig1155.1278.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1155.1278.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 1.120e-79
Identity = 154/341 (45.16%), Postives = 207/341 (60.70%), Query Frame = 1
Query:   88 AAREAVNLAVRIGSATVDLASLVADLGEELPMASVVL-------KTLKAIHSKVEAVKSNKDEITTLKKRCDYITACVIIKHKQCPTFATDIAPLEQCLLDVEELVERCSQRTTIFRCLRSRKDTEDIQSLYRRLGDARDDMGLASMATLEATIHDLRAQMIVPGTRRSP-------------------PIKQAAVPKAAPLWKHWHVERAEVMTNIFERLCIEEGPQVVGVVGDSGAGKTTAASQTVHSPEAREFFPDGIVWLSVDCGAADRLSALMMQLALKVYEDIAKKVGDRPTSSEDGASYVKRRMQGDDGGRLLRCLVVADNVWEHEVVSKLRNT 1032
            AA E   L +++GSATVD  + +A+LGE+LP    VL       KTL AI   VE V++N++E+ TL +RC Y+TACV++K +Q      D+ P+E+CL    ELVERC  R  + R L +  D E+I  +   + D   D+ LA +A LE    DL A +   GT ++                    P K A +PKA P+ K WHVER  VM  +FE L    GP +VG+VGDSG+GKTTAAS+ V S E R+ F DG+VWL+V+ GA DRL +LM+QLA  + E++    G RP +S+DGA+Y+K +MQ   GG+ L+CLVVADNVWE EVV KL  T
Sbjct:    8 AAAEVTKLGLKMGSATVDSITFMAELGEDLPFGEPVLPHLRPVLKTLTAIRETVENVQNNQEELQTLYRRCVYLTACVVVKSRQSSCSEMDLTPVEECLEAAGELVERCGGRGKMTRVLNASSDKEEIARMKANIRDLEADLSLAGVAILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTAVGGPHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGAKDRLPSLMLQLAHMMCEEVG---GRRPATSDDGAAYIKEKMQRGHGGKGLKCLVVADNVWEKEVVWKLLET 345          
BLAST of mRNA_F-serratus_M_contig1155.1278.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE)

HSP 1 Score: 260 bits (665), Expect = 2.510e-75
Identity = 155/342 (45.32%), Postives = 199/342 (58.19%), Query Frame = 1
Query:   88 AAREAVNLAVRIGSATVDLASLVADLGEELPMASVVLKTLKAIHSKVEAVKSNKDEITTLKKRCDYITACVIIKHKQCPTFATDIAPLEQCLLDVEELVERCSQRTTIFRCLRSRKDTEDIQSLYRRLGDARDDMGLASMATL--------------------------EATIHDLRAQM-IVPGTRRSPPIKQAAVPKAAPLWKHWHVERAEVMTNIFERLCIEEGPQVVGVVGDSGAGKTTAASQTVHSPEAREFFPDGIVWLSVDCGAADRLSALMMQLALKVYEDIAKKVGDRPTSSEDGASYVKRRMQGDDGGRLLRCLVVADNVWEHEVVSKLRNT 1032
            A  E   +A ++GSA  D+   VADLGEELP+   VL+TL+ I  KVE VK N +++T L +RC YITAC I+K +   T   D+APLE C+  VE+ VER  +R  I R L++  D  DI  L  RL D   D+ LA +A+L                          E    +L A+   +      PP K A VPK  P  K WHVER  V   +F+ L  + GP +VG+VGDSGAGKTTAAS  V S   RE F DGIVWL V+ G  D L  LM+QLA  V+EDI   VG RP+ S+DG +YVK++++   GG+ L+CLVVADNVWE +VVS+L  T
Sbjct:    8 ATGEVAKIASKMGSAAADVIQFVADLGEELPLLQPVLRTLRIIREKVETVKRNPEDLTVLHQRCTYITACFIVKCRHGYT-ELDVAPLEDCVNAVEKFVERYRKRGKISRVLKAVGDKGDIVQLKERLRDLEGDLSLAGIASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQALDADGGPHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSDDGLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLET 348          
BLAST of mRNA_F-serratus_M_contig1155.1278.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI)

HSP 1 Score: 253 bits (646), Expect = 8.060e-73
Identity = 144/323 (44.58%), Postives = 198/323 (61.30%), Query Frame = 1
Query:   76 DMHAAAREAVNLAVRIGSATVDLASLVADLGEELPMASVVLKTLKAIHSKVEAVKSNKDEITTLKKRCDYITACVIIKHKQCPTFATDIAPLEQCLLDVEELVERCSQRTTIFRCLRSRKDTEDIQSLYRRLGDARDDMGLASMATLEATIHDLRAQMIVPGTR-RSPPI---KQAAVPKAAPLWKHWHVERAEVMTNIFERLCIEEGPQVVGVVGDSGAGKTTAASQTVHSPEAREFFPDGIVWLSVDCGAADRLSALMMQLALKVYEDIAKKVGDRPTSSEDGASYVKRRMQGDDGGRLLRCLVVADNVWEHEVVSKLRNT 1032
            D+  +A EA  LA+ IGS   D  S   DLGEELP+   V KTLKAI + VE VK+N++E+  L++RC YITAC ++K +   +   D+APL+ C+   +   ERCS+R  + R +++  D  +I  L   +     D+GLA +A LE  + D++  +     R  S P    K AAVP  AP+ K WHVER   M  + + L   +   VV + G SG+GKTT A++ V S E RE F DGIVWL V+ GA  RL +LM+QLA  V+E+I   VG  P++SED A+Y+K+R++    GR L+CLVVADNVWE +VVSKL  T
Sbjct:    4 DISDSAAEAARLALEIGSTISDAVSCAVDLGEELPVIKPVFKTLKAIRTTVETVKNNREELAALEQRCTYITACFVVKCRLIES-EVDVAPLKDCVEAAKNFAERCSRRGKVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMKKTLDRIDQRLESLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDALNGSDRACVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVPSASEDSATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVET 325          
BLAST of mRNA_F-serratus_M_contig1155.1278.1 vs. uniprot
Match: D7G5K4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K4_ECTSI)

HSP 1 Score: 226 bits (575), Expect = 2.410e-68
Identity = 137/318 (43.08%), Postives = 188/318 (59.12%), Query Frame = 1
Query:   61 MTTLFDMHAAAREAVNLAVRIGSATVDLASLV-ADLGEELPMASVVLKTLKAIHSKVEAVKSNKDEITTLKKRCDYITACVIIKHKQCPTFAT--DIAPLEQCLLDVEELVERCSQRTTIFRCLRSRKDTEDIQSLYRRLGDARDDMGLASMATLEATIHDLRAQM--------------------IVPGTRRSPPIKQAAVPKAAPLWKHWHVERAEVMTNIFERLCIEEGPQVVGVVGDSGAGKTTAASQTVHSPEAREFFPDGIVWLSVDCGAADRLSALMMQLALKVYEDIAKKVGDRPTSSEDGA-SYVKRRM 942
            +TTL D   AA EA NLA+++GS  VD+ S V    G ELP+   VLKTL A+   VE V+ N+DE+  L+KRC Y+TA VI+K +Q P   +  D+ PL+ C++  E+  ERC +R   +  +++    +++ +L  R+     D+GLA +AT+   + DL+  M                    IV      PP K+A +P+  P+ K WHVER  VM  + E L  E GP +VG+VGDSGAGKTTAAS+ V S   RE F DGIVWL+V+ GA  RL +LM+QLA  V+EDI   VG RP  S D A +Y+K+RM
Sbjct:    2 VTTLSD---AAVEAANLALKMGSTAVDMISFVHRGDGGELPVVGTVLKTLTAMRETVETVQQNRDELAALEKRCTYMTASVIVKFRQIPQPGSGLDVTPLKDCVVVAEKFAERCKKRRMRWEIVKAFSVKDELATLNARIDRLVGDLGLAGIATVLGEVADLKGMMLEQMVSDQAAAQKELLANQEIVIDRLPKPPTKKADIPQGTPMRKSWHVERRHVMDTVVEALTGEAGPHLVGLVGDSGAGKTTAASELVGSNVVRESFSDGIVWLAVNYGANKRLPSLMLQLARMVHEDIGGCVGGRPNESGDNADAYIKQRM 316          
BLAST of mRNA_F-serratus_M_contig1155.1278.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE)

HSP 1 Score: 233 bits (593), Expect = 5.940e-66
Identity = 135/322 (41.93%), Postives = 184/322 (57.14%), Query Frame = 1
Query:  124 GSATVDLASLVADLGEELPMASVVLKTLKAIHSKVEAVKSNKDEITTLKKRCDYITACVIIKHKQCPTFATDIAPLEQCLLDVEELVERCSQRTTIFRCLRSRKDTEDIQSLYRRLGDARDDMGLASMATLEATIHDLRAQMIVPGTRRS-------------------PPIKQAAVPKAAPLWKHWHVERAEVMTNIFERLCIEEGPQVVGVVGDSGAGKTTAASQTVHSPEAREFFPDGIVWLSVDCGAADRLSALMMQLALKVYEDIAKKVGDRPTSSEDGASYVKRRMQGDDGGRLLRCLVVADNVWEHEVVSKLRNT 1032
            G+   D+ + + +  + LP+   VLKTLKA+                L +RC YIT CVI++ ++  +      PL +C+  V   VERCS+R  + R L++  D E+I  L +RL D   D+ LA +AT+   + DL+A +    T+++                    P   A VP   P  K WHVER  VM  + + L  E GP++VG+VGDSG+GKTTAA++ V S E RE F DGIVWLSV+ GA +RL ALMM LA  V+EDI   VG RP   +DGA+Y ++RMQ   GG+ L+CLVVADNVWE  V+SKL  T
Sbjct:    6 GTMASDVLAFLTEASDGLPLIEPVLKTLKAVXXXXXXXXXXXXXXAALYQRCTYITGCVIVRCRK-GSSGLKATPLMECVNAVGAFVERCSRRGMLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDALPGEGGPRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVNDGATERLRALMMHLARVVFEDIGGSVGRRPAGLDDGAAYTRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLET 326          
BLAST of mRNA_F-serratus_M_contig1155.1278.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 1.970e-61
Identity = 131/341 (38.42%), Postives = 198/341 (58.06%), Query Frame = 1
Query:   88 AAREAVNLAVRIGSATVDLASLVADLGEELPMASVVLKTLKAIHSKVEAVKSNKDEITTLKKRCDYITACVIIKHKQCPTFATDIAPLEQCLLDVEELVERCSQRTTIFRCLRSRKDTEDIQSLYRRLGDARDDMGLASMATLEATIHDLRAQMIVPGTRRSPP--IKQAAVPKAAPLWKHWHVERAEVMTNIFERLCIEEGPQVVGVVGDSGAGKTTAASQTV-------HSPEA-----------REFFPDGIVWLSVDCG--AADRLSALMMQLALKVYEDIAKKVGDRPTSSEDG--ASYVKR--RMQGDDGGRLLRCLVVADNVWEHEVVSKLRNT 1032
            A  EA  + +++GS   D+     +LG E+P+   VLKTLKAI  + EAV+SN + +  L++RC Y+TACVI+K +Q  +   ++APLE C+   E+ + RCS+R    RC ++  D +++ +L  R+     D+GLA +A+L+A + DL+A +     + + P  +  AAVP   P+   WHV R  V+  ++E L   + PQVVG+VG SG+GKTT A+  V       H  E            RE F DG+VWL V  G  +A+R+ ALM QLA  V+ED+    G  P +S  G  ++++    R +G   GR  RCLVVAD+VWE +++ +LR+T
Sbjct:   51 APEEAARVFLKMGSTAADIVMFTEELGGEVPVVGAVLKTLKAIRLRFEAVQSNTERLKALEERCTYVTACVIVKWRQTSSSEMNVAPLESCVNAAEDFIARCSRRGLCGRCTKASSDNDELLTLNSRVDSLTGDLGLAGIASLDAKVDDLKAMLAEVIAQNTMPASVPVAAVPNGKPVEHSWHVARDRVVDAVYEHLSCGQTPQVVGLVGRSGSGKTTCAASIVGESTGRRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDLKHSYGFAPGASPTGGGSAFISDFVRGKGSAAGRK-RCLVVADDVWEVDILEELRHT 390          
BLAST of mRNA_F-serratus_M_contig1155.1278.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE)

HSP 1 Score: 216 bits (550), Expect = 1.170e-59
Identity = 130/335 (38.81%), Postives = 178/335 (53.13%), Query Frame = 1
Query:   76 DMHAAAREAVNLAVRIGSATVDLASLVADLGEELPMASVVLKTLKAIHSKVEAVKSNKDEITTLKKRCDYITACVIIKHKQCPTFATDIAPLEQCLLDVEELVERCSQRTTIFRCLRSRKDTEDIQSLYRRLGDARDDMGLASMATLEATIHDLRAQM-------------------IVPGTRRSPPIKQAAVPKAAPLWKHWHVERAEVMTNIFERLCIEEGPQVVGVVGDSGAGKTTAASQTVHSPEAREFFPDGIVWLSVDCGAADRLSALMMQLALKVYEDIAKKVGDRPTSSEDGASYVKRRMQGDDGGRLLRCLVVADNVWEHEVVSKL 1023
            +   AA E   LA+++GSATVD  + VADL E+LP                     N++E+ TL +RC ++T CVI+K +Q      D++P+E+CL    ELVERC  R  + R L +  D + I  +   + D   ++ LA +A LE    DLRA +                   I+       P K A +PK+ P+WK WHVER +V+  +FE L  + GP +VG+VGDSG+GKTTAAS+ V S E                   DRL +LM+QLA  VYE+I    G RP +S+DG +Y+K RM    GG  L+CL V DNVWE EVV +L
Sbjct:    4 ESSGAAAEVTKLALKMGSATVDSITFVADLCEDLPF-------------------ENQEELQTLYRRCVFLTTCVIVKSRQSSFSEMDVSPVEECLEAAGELVERCGGRGKMTRVLNASSDKDQIARMKANIRDLEANLSLAGVAILEGKTSDLRATVERMAKIQAATQEVILANTEIITDRLSKTPAKPAKIPKSTPIWKSWHVERFDVVERVFEPLTADGGPPLVGLVGDSGSGKTTAASEIVRSNE-------------------DRLPSLMLQLAHMVYEEIG---GRRPATSDDGTAYIKERMHRGHGGEGLKCLGVVDNVWEKEVVCEL 297          
BLAST of mRNA_F-serratus_M_contig1155.1278.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 1.340e-55
Identity = 118/271 (43.54%), Postives = 158/271 (58.30%), Query Frame = 1
Query:  226 VEAVKSNKDEITTLKKRCDYITACVIIKHKQC-PTFATDIAPLEQCLLDVEELVERCSQRTTIFRCLRSRKDTEDIQSLYRRLGDARDDMGLASMATLEATIHDLRAQMIVPGTRRSPPIKQAAVPKAAPLWKHWHVERAEVMTNIFERLCIEEGPQVVGVVGDSGAGKTTAASQTVHSPEAREFFPDGIVWLSVDCGAADRLSALMMQLALKVYEDIAKKVGDRPTSSEDGA-SYVKRRMQGDDGGRLLRCLVVADNVWEHEVVSKLRNT 1032
            VE V   +DE+  L+KRC Y+TAC+I K +   P  A +++PLE C+++ E+ VER  +RT              ++ + +    AR ++              L  Q I+      PPIK+A VP+  P  K WHVER  V   + E L  E GP++VG+VGDSGAGKTTAA++ V S   RE F DGIVWL+V+ GA  RL +LM+QLA  V EDI  +VG  P  S   A +Y+K+RM+   GG+ L+CL VADNVWE EVVS L  T
Sbjct:    5 VETVYQTRDELAALEKRCTYMTACIIAKFRHAHPGSAPNVSPLEDCVMEAEKFVERRKKRT--------------MEQMVQNQAAARKEL--------------LANQEIIIDRLPKPPIKKAYVPQGTPTRKSWHVER-HVTETVVEALTGEAGPRLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYGANKRLPSLMLQLARMVQEDIGGRVGGHPNESGGNADAYIKQRMENGHGGKGLKCLAVADNVWEKEVVSMLLKT 246          
BLAST of mRNA_F-serratus_M_contig1155.1278.1 vs. uniprot
Match: A0A6H5JSI2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI2_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 1.060e-46
Identity = 123/330 (37.27%), Postives = 174/330 (52.73%), Query Frame = 1
Query:   61 MTTLFDMHAAAREAVNLAVRIGSATV--DLASLVADLGEELPMASVVLKTLKAIHSKVEAVKSNKDEITTLKKRCDYITACVIIKHKQCPTFATDIAPLEQCLLDVEELVERCSQRTTIFRCLRSRKDTEDIQSLYRRLGDARDDMGLASMATLEATIHDLRAQMIVPGTRRSPPIKQAAVPKAAPLWKHWHVERAEVMTNIFERLCIEEGPQVVGVVGDSGAGKTTAASQTV--HSPEAREFFPDGIVWLSV--DCGAADRLSALMMQLALKVYEDIAKKVGDRPTSSEDGASYVKRRMQGDDGGRLLRCLVVADNVWEHEVVSKLRNT 1032
            M T  D   A RE V    R  + TV    A    ++G   P+ + +   L      V+A   NK+E+  L +RC+ IT  VI K K   T   D+ PL++C+  ++E+ ER   R  + R  + R+D EDIQ L +R+ D    MGL+ +      +  + A++        P  K A VPK AP  K +HV R  V+  + + L  + GP +  + G SGAGKTT+A+  V       R  FPDG+VWL V  + G ADRL +LM  LA +++ED+ K   D PT  +DG SYV++ +  +     LRCLVVAD+VWE  VV KLR T
Sbjct:    1 MATRGDAVQATREGV----RFTALTVVQSFAEGAIEIGASAPVVAPLCTALLKAKGVVDAASRNKEELEELHERCEMITIQVIDKAKASKTSTIDVKPLQECVDKLKEVAERYHDRGRLARLAQFRRDGEDIQRLRKRIEDVVPIMGLSGVVNNGEKLDQILARL-------QPGPKLAPVPKKAPFTKSFHVVRDGVVDRVCKILGGDGGPAMAALTGGSGAGKTTSAAAMVGERGDRVRALFPDGVVWLWVGREAGTADRLPSLMSNLAKRLHEDVMKGAVDAPTG-DDGVSYVRKIVSQEK----LRCLVVADDVWEASVVQKLRET 314          
BLAST of mRNA_F-serratus_M_contig1155.1278.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 3.050e-45
Identity = 87/150 (58.00%), Postives = 110/150 (73.33%), Query Frame = 1
Query:  583 KQAAVPKAAPLWKHWHVERAEVMTNIFERLCIEEGPQVVGVVGDSGAGKTTAASQTVHSPEAREFFPDGIVWLSVDCGAADRLSALMMQLALKVYEDIAKKVGDRPTSSEDGASYVKRRMQGDDGGRLLRCLVVADNVWEHEVVSKLRNT 1032
            K   VPK  P  K W+V+R  VM  +FE L  + GP++VG+VG SG+GKTT AS++V S E +E F DGI WLSV+ GA +RLS+LM+QLA  VYEDI   VG RPTSS+D A+Y+++RM+   GG+ L+CLVVADNVWE EVVSKL  T
Sbjct:   32 KLTKVPKGTPARKSWYVKRRHVMDTVFEGLASDGGPRLVGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVNDGAKERLSSLMLQLARVVYEDIGCSVGRRPTSSDDCAAYIRQRMKKGTGGKKLKCLVVADNVWEKEVVSKLLET 181          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1155.1278.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7FZY7_ECTSI1.120e-7945.16NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KRK8_9PHAE2.510e-7545.32NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
D7FZW8_ECTSI8.060e-7344.58NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7G5K4_ECTSI2.410e-6843.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLK9_9PHAE5.940e-6641.93NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
D8LFN6_ECTSI1.970e-6138.42NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KJ30_9PHAE1.170e-5938.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J759_9PHAE1.340e-5543.54NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JSI2_9PHAE1.060e-4637.27NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KYW3_9PHAE3.050e-4558.00NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1155contigF-serratus_M_contig1155:248308..250239 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score278.5
Seed ortholog evalue4.3e-72
Seed eggNOG ortholog2880.D7FZX2
KEGG koko:K10407
KEGG Pathwayko05132,map05132
Hectar predicted targeting categoryother localisation
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04812
Exons2
Model size1034
Cds size1032
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929052.6503146-CDS-F-serratus_M_contig1155:248307..2488561622929052.6503146-CDS-F-serratus_M_contig1155:248307..248856Fucus serratus maleCDSF-serratus_M_contig1155 248308..248856 +
1690962683.6360633-CDS-F-serratus_M_contig1155:248307..2488561690962683.6360633-CDS-F-serratus_M_contig1155:248307..248856Fucus serratus maleCDSF-serratus_M_contig1155 248308..248856 +
1622929052.6657128-CDS-F-serratus_M_contig1155:249756..2502391622929052.6657128-CDS-F-serratus_M_contig1155:249756..250239Fucus serratus maleCDSF-serratus_M_contig1155 249757..250239 +
1690962683.647045-CDS-F-serratus_M_contig1155:249756..2502391690962683.647045-CDS-F-serratus_M_contig1155:249756..250239Fucus serratus maleCDSF-serratus_M_contig1155 249757..250239 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1155.1278.1prot_F-serratus_M_contig1155.1278.1Fucus serratus malepolypeptideF-serratus_M_contig1155 248308..250239 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1155.1278.1

>prot_F-serratus_M_contig1155.1278.1 ID=prot_F-serratus_M_contig1155.1278.1|Name=mRNA_F-serratus_M_contig1155.1278.1|organism=Fucus serratus male|type=polypeptide|length=344bp
MSAAGWSSLGLHTTQGLFFTMTTLFDMHAAAREAVNLAVRIGSATVDLAS
LVADLGEELPMASVVLKTLKAIHSKVEAVKSNKDEITTLKKRCDYITACV
IIKHKQCPTFATDIAPLEQCLLDVEELVERCSQRTTIFRCLRSRKDTEDI
QSLYRRLGDARDDMGLASMATLEATIHDLRAQMIVPGTRRSPPIKQAAVP
KAAPLWKHWHVERAEVMTNIFERLCIEEGPQVVGVVGDSGAGKTTAASQT
VHSPEAREFFPDGIVWLSVDCGAADRLSALMMQLALKVYEDIAKKVGDRP
TSSEDGASYVKRRMQGDDGGRLLRCLVVADNVWEHEVVSKLRNT
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mRNA from alignment at F-serratus_M_contig1155:248308..250239+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1155.1278.1 ID=mRNA_F-serratus_M_contig1155.1278.1|Name=mRNA_F-serratus_M_contig1155.1278.1|organism=Fucus serratus male|type=mRNA|length=1932bp|location=Sequence derived from alignment at F-serratus_M_contig1155:248308..250239+ (Fucus serratus male)
ATGTCTGCTGCAGGTTGGTCAAGTCTCGGACTACACACTACACAGGGCCT GTTCTTCACAATGACTACACTGTTTGACATGCACGCAGCGGCACGAGAGG CTGTGAACCTCGCCGTCAGGATAGGTTCAGCAACCGTTGACTTGGCGTCG CTCGTGGCGGACTTGGGCGAGGAGTTACCGATGGCGTCGGTAGTGCTGAA GACTCTCAAGGCCATCCACAGCAAGGTCGAGGCCGTCAAGAGCAACAAAG ACGAAATCACCACGCTGAAGAAGAGATGCGACTACATCACGGCGTGCGTC ATCATTAAGCACAAGCAGTGTCCCACTTTCGCGACAGATATAGCGCCGTT GGAACAATGTCTTCTTGATGTGGAGGAATTGGTGGAGCGCTGTTCCCAGC GAACGACGATTTTCAGGTGTTTGCGCTCAAGAAAAGACACGGAAGACATC CAGAGTCTATACAGGCGTCTCGGAGATGCCAGGGATGACATGGGACTTGC GAGCATGGCCACATTAGAAGCAACGATCCACGACTTGAGGGCACAGATGG TGAGTCCAACTGTGGTTGGAAGACACATATCATATATTTGTATATTTTTT GTCATTCGAGTTGAGTGCCACATCGGGCTACGTAGGGGCCCTCGATTTTG GTGGGAAGGTTGCATCTCTTGGGAAACTATTTAGAAATTTTCTTCCAACC CTATGGGCGGTATGTAAACAGTTAGCAGTAAATAGTAAGTAACGTTTTCT CACGTTCACGCGGTGATCTGGCAGCTGTACAACAGTGCACGATTGCCATA CTCGACCTAGTCAGCGCCGACGTGTAGAGATGTACGTTATCAATTCCTAC TTAGTATATAGGAAATATGTATCGGTGGAGGTCAGCTTCAACACCCCGAT GCTGCCTTAAGATCGCCAACGCTGGAATCACAGCTATCATCCGCGTTGTG TTGCAATATCCGCTACGAATAAGCATACCAAGTGGAATGCTTTCACAACC GGCTATTAATATAGTTATTTTTGCATGTTAATAACACTCAAACCAGCGGA AATTGAACCCCTGATTTGGTTTTTGTTCGGTGCAGAGTATTCAAGTATAA TTCTGCGAGTGCCAGCATTCAGCGCGGAAAAACTTGTAAGACGCGAAGTG CAGTTCCTTTATTATCGTGCGCTCACTCTTAAACAAGGGCTAGGGCAATT GTTTCAGGTCTTTCGATATTGCATTGGCATGAAGATTCACTTGTTCCAAC AACACATTTCGCTTTTGTTCGATGCATGCTCGTAGTAATACGTAGACACT ACTGCTATATATCGGAGATAACTAGTAGCAGAACCGGGAGCTTGCTAAAT CTGAAATAACATTTTAACGCCTTTCAAAGGTTGCACTCTGCTGACTAGTT GGGCTATTTTTTATCGACCTCAAATTTATTTATATTCCTTGGTGTCAAGA TCGTCCCAGGAACGCGGAGGTCGCCTCCGATCAAACAAGCGGCGGTGCCG AAGGCCGCCCCCCTGTGGAAGCACTGGCATGTCGAGCGCGCCGAGGTCAT GACTAACATCTTCGAGCGGCTTTGTATCGAGGAAGGACCGCAAGTGGTTG GTGTGGTGGGTGACAGCGGAGCGGGTAAGACCACAGCCGCATCCCAGACA GTTCACAGCCCGGAAGCCCGAGAATTTTTTCCAGATGGTATCGTGTGGCT TTCTGTCGACTGCGGTGCCGCGGATCGACTGTCGGCATTGATGATGCAAT TGGCTCTCAAGGTCTATGAAGACATTGCTAAAAAAGTGGGCGACAGGCCA ACCTCTTCGGAAGATGGAGCTTCCTATGTGAAGCGGCGTATGCAGGGAGA CGATGGAGGCAGACTTTTGCGGTGCCTGGTCGTTGCGGATAATGTGTGGG AGCACGAGGTGGTGTCAAAGCTGCGAAATACT
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Coding sequence (CDS) from alignment at F-serratus_M_contig1155:248308..250239+

>mRNA_F-serratus_M_contig1155.1278.1 ID=mRNA_F-serratus_M_contig1155.1278.1|Name=mRNA_F-serratus_M_contig1155.1278.1|organism=Fucus serratus male|type=CDS|length=2064bp|location=Sequence derived from alignment at F-serratus_M_contig1155:248308..250239+ (Fucus serratus male)
ATGTCTGCTGCAGGTTGGTCAAGTCTCGGACTACACACTACACAGGGCCT
GTTCTTCACAATGACTACACTGTTTGACATGCACGCAGCGGCACGAGAGG
CTGTGAACCTCGCCGTCAGGATAGGTTCAGCAACCGTTGACTTGGCGTCG
CTCGTGGCGGACTTGGGCGAGGAGTTACCGATGGCGTCGGTAGTGCTGAA
GACTCTCAAGGCCATCCACAGCAAGGTCGAGGCCGTCAAGAGCAACAAAG
ACGAAATCACCACGCTGAAGAAGAGATGCGACTACATCACGGCGTGCGTC
ATCATTAAGCACAAGCAGTGTCCCACTTTCGCGACAGATATAGCGCCGTT
GGAACAATGTCTTCTTGATGTGGAGGAATTGGTGGAGCGCTGTTCCCAGC
GAACGACGATTTTCAGGTGTTTGCGCTCAAGAAAAGACACGGAAGACATC
CAGAGTCTATACAGGCGTCTCGGAGATGCCAGGGATGACATGGGACTTGC
GAGCATGGCCACATTAGAAGCAACGATCCACGACTTGAGGGCACAGATGA
TGTCTGCTGCAGGTTGGTCAAGTCTCGGACTACACACTACACAGGGCCTG
TTCTTCACAATGACTACACTGTTTGACATGCACGCAGCGGCACGAGAGGC
TGTGAACCTCGCCGTCAGGATAGGTTCAGCAACCGTTGACTTGGCGTCGC
TCGTGGCGGACTTGGGCGAGGAGTTACCGATGGCGTCGGTAGTGCTGAAG
ACTCTCAAGGCCATCCACAGCAAGGTCGAGGCCGTCAAGAGCAACAAAGA
CGAAATCACCACGCTGAAGAAGAGATGCGACTACATCACGGCGTGCGTCA
TCATTAAGCACAAGCAGTGTCCCACTTTCGCGACAGATATAGCGCCGTTG
GAACAATGTCTTCTTGATGTGGAGGAATTGGTGGAGCGCTGTTCCCAGCG
AACGACGATTTTCAGGTGTTTGCGCTCAAGAAAAGACACGGAAGACATCC
AGAGTCTATACAGGCGTCTCGGAGATGCCAGGGATGACATGGGACTTGCG
AGCATGGCCACATTAGAAGCAACGATCCACGACTTGAGGGCACAGATGAT
CGTCCCAGGAACGCGGAGGTCGCCTCCGATCAAACAAGCGGCGGTGCCGA
AGGCCGCCCCCCTGTGGAAGCACTGGCATGTCGAGCGCGCCGAGGTCATG
ACTAACATCTTCGAGCGGCTTTGTATCGAGGAAGGACCGCAAGTGGTTGG
TGTGGTGGGTGACAGCGGAGCGGGTAAGACCACAGCCGCATCCCAGACAG
TTCACAGCCCGGAAGCCCGAGAATTTTTTCCAGATGGTATCGTGTGGCTT
TCTGTCGACTGCGGTGCCGCGGATCGACTGTCGGCATTGATGATGCAATT
GGCTCTCAAGGTCTATGAAGACATTGCTAAAAAAGTGGGCGACAGGCCAA
CCTCTTCGGAAGATGGAGCTTCCTATGTGAAGCGGCGTATGCAGGGAGAC
GATGGAGGCAGACTTTTGCGGTGCCTGGTCGTTGCGGATAATGTGTGGGA
GCACGAGGTGGTGTCAAAGCTGCGAAATACTATCGTCCCAGGAACGCGGA
GGTCGCCTCCGATCAAACAAGCGGCGGTGCCGAAGGCCGCCCCCCTGTGG
AAGCACTGGCATGTCGAGCGCGCCGAGGTCATGACTAACATCTTCGAGCG
GCTTTGTATCGAGGAAGGACCGCAAGTGGTTGGTGTGGTGGGTGACAGCG
GAGCGGGTAAGACCACAGCCGCATCCCAGACAGTTCACAGCCCGGAAGCC
CGAGAATTTTTTCCAGATGGTATCGTGTGGCTTTCTGTCGACTGCGGTGC
CGCGGATCGACTGTCGGCATTGATGATGCAATTGGCTCTCAAGGTCTATG
AAGACATTGCTAAAAAAGTGGGCGACAGGCCAACCTCTTCGGAAGATGGA
GCTTCCTATGTGAAGCGGCGTATGCAGGGAGACGATGGAGGCAGACTTTT
GCGGTGCCTGGTCGTTGCGGATAATGTGTGGGAGCACGAGGTGGTGTCAA
AGCTGCGAAATACT
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