mRNA_F-serratus_M_contig1122.1129.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1122.1129.1 vs. uniprot
Match: D7FPI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI4_ECTSI) HSP 1 Score: 134 bits (336), Expect = 7.290e-35 Identity = 72/84 (85.71%), Postives = 76/84 (90.48%), Query Frame = 2
Query: 326 MNEFNDLFVAAREEMEFAAESKETTYFDEEASAAKEVVEQAVGLFEEVLGSVDEAKRTEIMRQSGLRVEQLKAELDQLLESDDH 577
M+EFNDLFV AREEME+A ESKETTYFDEEA+AAKE VE+AV LFEEVL SVDE KRTEIMR SGLRVEQLKAELDQLL SDDH
Sbjct: 1 MDEFNDLFVTAREEMEYAEESKETTYFDEEAAAAKEAVEEAVALFEEVLRSVDEKKRTEIMRSSGLRVEQLKAELDQLLISDDH 84
BLAST of mRNA_F-serratus_M_contig1122.1129.1 vs. uniprot
Match: A0A7S2CH79_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CH79_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 3.220e-21 Identity = 51/91 (56.04%), Postives = 68/91 (74.73%), Query Frame = 2
Query: 305 DEELARKMNEFNDLFVAAREEMEFAAESKETTYFDEEASAAKEVVEQAVGLFEEVLGSVDEAKRTEIMRQSGLRVEQLKAELDQLLESDDH 577
D EL ++++ NDLFV AREE+E A ESKETTY+DEEA A+E VE A+ + ++L S++E R E R +GL++EQLKAEL+ LL SDDH
Sbjct: 9 DPELRKRVDSLNDLFVEAREEIEMAEESKETTYYDEEAEIAQEAVEAALAEYGDILNSLEEPARGEFQRGNGLKMEQLKAELEILLHSDDH 99
BLAST of mRNA_F-serratus_M_contig1122.1129.1 vs. uniprot
Match: A0A836C9H1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9H1_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 2.100e-20 Identity = 50/92 (54.35%), Postives = 68/92 (73.91%), Query Frame = 2
Query: 302 SDEELARKMNEFNDLFVAAREEMEFAAESKETTYFDEEASAAKEVVEQAVGLFEEVLGSVDEAKRTEIMRQSGLRVEQLKAELDQLLESDDH 577
+DE + RKM+EFNDLFV AREE+++A ESKETTYF++E AA+ VE A+ F E+L V+E ++ IMR +GL+VEQLK EL L+ +H
Sbjct: 64 NDEAIRRKMDEFNDLFVEAREEIQYAGESKETTYFNDEVKAAQAAVESALECFSELLNGVEEEQKQAIMRSNGLKVEQLKQELQLLMIEHEH 155
BLAST of mRNA_F-serratus_M_contig1122.1129.1 vs. uniprot
Match: A0A7S4JN07_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JN07_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 7.600e-19 Identity = 48/90 (53.33%), Postives = 68/90 (75.56%), Query Frame = 2
Query: 293 STLSDEELARKMNEFNDLFVAAREEMEFAAESKETTYFDEEASAAKEVVEQAVGLFEEVLGSVDEAKRTEIMRQSGLRVEQLKAELDQLL 562
S+LS++EL +++EF DLFV AR +E A+S +TTYFDEEA AAKE V++AV F+ ++G +DE + +MRQ+GL+V QLK ELD +L
Sbjct: 75 SSLSEDELRSRLDEFQDLFVEARLSIEDCADSADTTYFDEEAEAAKEAVDEAVSAFDTLIGELDEETKGRVMRQNGLKVAQLKGELDLVL 164
BLAST of mRNA_F-serratus_M_contig1122.1129.1 vs. uniprot
Match: A0A7S2SM76_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SM76_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.170e-14 Identity = 40/82 (48.78%), Postives = 62/82 (75.61%), Query Frame = 2
Query: 323 KMNEFNDLFVAAREEMEFAAESKETTYFDEEASAAKEVVEQAVGLFEEVLGSVDEAKRTEIMRQSGLRVEQLKAELDQLLES 568
++NE +DLFV AREE++ A ES TTY++EEA AAKE VE A+ ++ +LG++++ E R +GL++EQL+AEL+ L+E+
Sbjct: 19 ELNELSDLFVEAREEIDLAMESIGTTYYNEEAEAAKEAVEAAISKYQAILGNLEDPHSGEFQRGNGLKMEQLRAELEGLIEA 100
BLAST of mRNA_F-serratus_M_contig1122.1129.1 vs. uniprot
Match: A0A2G2ZQ26_CAPAN (Uncharacterized protein n=1 Tax=Capsicum annuum TaxID=4072 RepID=A0A2G2ZQ26_CAPAN) HSP 1 Score: 80.9 bits (198), Expect = 1.900e-14 Identity = 42/82 (51.22%), Postives = 61/82 (74.39%), Query Frame = 2
Query: 320 RKMNEFNDLFVAAREEMEFAAESKETTYFDEEASAAKEVVEQAVGLFEEVLGSVDEAKRTEIMRQSGLRVEQLKAELDQLLE 565
R++++ N F AREE+E A ESKET YF+EEA A++ V++ + L++E+LG V E+++ I R GL++EQLKAELDQL E
Sbjct: 77 REVDKINLKFAEAREEIESAMESKETVYFNEEADCARDAVKEVLDLYQELLGKVSESEKGVIQRSMGLKIEQLKAELDQLNE 158
BLAST of mRNA_F-serratus_M_contig1122.1129.1 vs. uniprot
Match: A0A7S2A9P4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9P4_TRICV) HSP 1 Score: 80.5 bits (197), Expect = 2.600e-14 Identity = 42/95 (44.21%), Postives = 66/95 (69.47%), Query Frame = 2
Query: 278 PRAGLSTLSDEELARKMNEFNDLFVAAREEMEFAAESKETTYFDEEASAAKEVVEQAVGLFEEVLGSVDEAKRTEIMRQSGLRVEQLKAELDQLL 562
P + +TLSD++L ++ +F + F AR +E A++ +TTYFDEEA AA+E V+ A+ FE +L +DE + ++RQ+GL+VEQLK EL+ +L
Sbjct: 60 PFSSGATLSDDDLRSRLEDFQEQFAEARLCIEDCADAADTTYFDEEADAAREAVDLALKTFESILAELDEETKGRVVRQNGLKVEQLKGELELVL 154
BLAST of mRNA_F-serratus_M_contig1122.1129.1 vs. uniprot
Match: A0A7S0FJV1_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FJV1_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 5.660e-14 Identity = 41/97 (42.27%), Postives = 68/97 (70.10%), Query Frame = 2
Query: 290 LSTLSDEELARKMNEFNDLFVAAREEMEFAAESKETTYFDEEASAAKEVVEQAVGLFEEVLGSV-DEAKRTEIMRQSGLRVEQLKAELDQLLESDDH 577
L+T+ + +L ++M+EF DLFV AR +E A ES+ETTYF E+ AA+E V++AV F+ ++ + D+ ++ ++R +GL+VEQLK EL +++ H
Sbjct: 80 LATMPENDLRKRMDEFQDLFVEARLCIEDAQESQETTYFAEDLDAAQEAVDEAVAAFKGIVNDIEDKDQKNSVLRSNGLKVEQLKGELQMIIDGHGH 176
BLAST of mRNA_F-serratus_M_contig1122.1129.1 vs. uniprot
Match: UPI001C4FFF6E (embryogenesis-like protein n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4FFF6E) HSP 1 Score: 77.0 bits (188), Expect = 6.370e-14 Identity = 39/82 (47.56%), Postives = 58/82 (70.73%), Query Frame = 2
Query: 314 LARKMNEFNDLFVAAREEMEFAAESKETTYFDEEASAAKEVVEQAVGLFEEVLGSVDEAKRTEIMRQSGLRVEQLKAELDQL 559
++R+++E N F AREE+E A ESKET YFDEEA +A+E + + +F+ +L + E +R + R GL++EQLKAEL+QL
Sbjct: 1 MSREIDEINLKFAEAREEIEMALESKETVYFDEEAESAREAAKVVLDMFQGLLAKLPENERASLQRSMGLKIEQLKAELEQL 82
BLAST of mRNA_F-serratus_M_contig1122.1129.1 vs. uniprot
Match: A0A8B8MI30_ABRPR (uncharacterized protein LOC113873100 n=1 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8MI30_ABRPR) HSP 1 Score: 79.3 bits (194), Expect = 6.480e-14 Identity = 43/88 (48.86%), Postives = 59/88 (67.05%), Query Frame = 2
Query: 302 SDEELARKMNEFNDLFVAAREEMEFAAESKETTYFDEEASAAKEVVEQAVGLFEEVLGSVDEAKRTEIMRQSGLRVEQLKAELDQLLE 565
S+ + ++++ N F AREE+E A ESK+T YFDEEA A+ V + VGLFEE+L + E +R + R GL++EQLKAEL QL E
Sbjct: 70 SELDQTKEVDTINLKFAEAREEIEMALESKDTVYFDEEAECARAAVNEVVGLFEELLAKLPERERGALQRSMGLKIEQLKAELQQLDE 157 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1122.1129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1122.1129.1 >prot_F-serratus_M_contig1122.1129.1 ID=prot_F-serratus_M_contig1122.1129.1|Name=mRNA_F-serratus_M_contig1122.1129.1|organism=Fucus serratus male|type=polypeptide|length=169bp MLRVCSRSTKCLALVTEPKWNIICFRPIRAQWRASSALSPAPRTSAQRRVback to top mRNA from alignment at F-serratus_M_contig1122:179324..185681- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1122.1129.1 ID=mRNA_F-serratus_M_contig1122.1129.1|Name=mRNA_F-serratus_M_contig1122.1129.1|organism=Fucus serratus male|type=mRNA|length=6358bp|location=Sequence derived from alignment at F-serratus_M_contig1122:179324..185681- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1122:179324..185681- >mRNA_F-serratus_M_contig1122.1129.1 ID=mRNA_F-serratus_M_contig1122.1129.1|Name=mRNA_F-serratus_M_contig1122.1129.1|organism=Fucus serratus male|type=CDS|length=1014bp|location=Sequence derived from alignment at F-serratus_M_contig1122:179324..185681- (Fucus serratus male)back to top |