mRNA_F-serratus_M_contig1117.1089.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1117.1089.1 vs. uniprot
Match: D8LJM8_ECTSI (PAP_fibrillin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJM8_ECTSI) HSP 1 Score: 268 bits (684), Expect = 1.990e-86 Identity = 127/171 (74.27%), Postives = 149/171 (87.13%), Query Frame = 1
Query: 325 KTLLMRLILSTSIEQKDSEKVAAKVNDIIGSLENRKQGFQEDKVDGEWVLCFTRNSQGSPSLQKALPGDRGFQNFDVGAKKFFNIVQLWGGRVKVLADVSYEVHPEEPNRLQSTIVAAGLKLGPLRLPLPLTGRVGYLDFTYQDEDIRVTRGNRGGLFLHMRSGSSFAIDS 837
K LMRLIL TSIE+K+S A +V+ IIG LE K+GFQED V+GEWVLCFTRNS+GSPSLQKALPGDRGFQNFDV AK+F NIV++WGG++KV+ADV YE+ PEEPN+L STIV AG+ LGP+R+PLPLTGRVGYL+FTYQD DIR+TRGNRGGLFLHMR GS+F +DS
Sbjct: 85 KAELMRLILGTSIEEKESAGAAEEVDAIIGELETLKRGFQEDSVNGEWVLCFTRNSEGSPSLQKALPGDRGFQNFDVKAKQFTNIVRVWGGKLKVVADVGYEIRPEEPNKLVSTIVGAGVNLGPVRVPLPLTGRVGYLEFTYQDNDIRITRGNRGGLFLHMRPGSAFPLDS 255
BLAST of mRNA_F-serratus_M_contig1117.1089.1 vs. uniprot
Match: A0A835YZD2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZD2_9STRA) HSP 1 Score: 174 bits (440), Expect = 4.900e-50 Identity = 89/167 (53.29%), Postives = 117/167 (70.06%), Query Frame = 1
Query: 319 EEKTLLMRLILSTSIEQKDSEKVAAKVNDIIGSLENRKQGFQEDKVDGEWVLCFTRNSQGSPSLQKALPGDRGFQNFDVGAKKFFNIVQLWGGRVKVLADVSYEVHPEEPNRLQSTIVAAGLKLGPLRLPLPLTGRVGYLDFTYQDEDIRVTRGNRGGLFLHMRSGS 819
++K L++++ +T + +++S A +V+ II LE +GF E VDGEW L F+RNS+GSPSLQK +GF NFDV K F NIVQL G ++KVLADV+YE E +RL STI AG+KLGPL +PLP GR GYLD Y D++ RVT+GNRGG+FLH+R S
Sbjct: 57 DDKRRLLKIVSTTGMGKEESIAGAQEVDAIINKLETLGKGFDEATVDGEWQLVFSRNSKGSPSLQKVFSFQKGFANFDVREKVFHNIVQLAGNKIKVLADVAYEA---EGDRLHSTITMAGIKLGPLFIPLPFKGRKGYLDMLYLDDEFRVTKGNRGGVFLHVRPNS 220
BLAST of mRNA_F-serratus_M_contig1117.1089.1 vs. uniprot
Match: A0A7S4D433_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4D433_9EUGL) HSP 1 Score: 152 bits (383), Expect = 6.300e-39 Identity = 78/165 (47.27%), Postives = 108/165 (65.45%), Query Frame = 1
Query: 316 EEEKTLLMRLILSTSIEQKDSEKVAAKVNDIIGSLENRKQGFQEDKVDGEWVLCFTRNSQGSPSLQKALPGDRGFQNFDVGAKKFFNIVQLWGGRVKVLADVSYEVHPEEPNRLQSTIVAAGLKLGPLRLPLPLTGRVGYLDFTYQDEDIRVTRGNRGGLFLHMR 810
+E K L+ L++ T + + + A V+++I L+ GF VDG W L FTRNS +P +Q A ++G+QNFD F NI +L+G RV+++ADVSY PE P+RL S IV AGL LGPL++PLPL G+L+F Y D ++RVTRGNRGGLF+H+R
Sbjct: 209 QEIKEQLLELLMPTDMGKVEGGDTAKAVDELITKLQGLDAGFDPAVVDGSWQLVFTRNSNDAPKVQAAFSFNKGYQNFDTKECTFRNIAELYGKRVQLIADVSYRPDPEIPSRLISDIVYAGLHLGPLKIPLPLRA-TGWLEFVYLDSELRVTRGNRGGLFVHIR 372
BLAST of mRNA_F-serratus_M_contig1117.1089.1 vs. uniprot
Match: A0A7S1IY75_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IY75_9EUGL) HSP 1 Score: 146 bits (369), Expect = 2.810e-38 Identity = 81/184 (44.02%), Postives = 115/184 (62.50%), Query Frame = 1
Query: 325 KTLLMRLILSTSIEQKDSEKVAAKVNDIIGSLENRKQGFQEDKVDGEWVLCFTRNSQGSPSLQKALPGDRGFQNFDVGAKKFFNIVQLWGGRVKVLADVSYEVHPEEPNRLQSTIVAAGLKLGPLRLPLPLTGRVGYLDFTYQDEDIRVTRGNRGGLFLHMRSGSS-----FAIDSSRPVSKRW 861
K L+ ++ T + Q +S + + +V+ +I LE+ K G+ DG+W L FTRNS +P +Q A ++G+QNFDV A F NI QL G V+V+ADV Y P+ P+RL STI AGL + LRLPLPL G+L++ Y D ++RVTRGNRGGLF+H+R + A+D+ +S RW
Sbjct: 35 KNELLEILNGTGMGQAESAEQSDRVDRLIRQLEDMKAGYDPAVADGDWQLVFTRNSTSAPKVQAAFSFNQGYQNFDVKASTFRNIAQLCGKWVQVVADVRYTPDPDLPSRLTSTIFYAGLHILCLRLPLPLRA-TGWLEYIYLDPELRVTRGNRGGLFVHIRPAKARSQVRTAVDTK--LSNRW 215
BLAST of mRNA_F-serratus_M_contig1117.1089.1 vs. uniprot
Match: A0A6T8LFK0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8LFK0_HEMAN) HSP 1 Score: 127 bits (320), Expect = 9.190e-32 Identity = 72/169 (42.60%), Postives = 104/169 (61.54%), Query Frame = 1
Query: 325 KTLLMRLILSTSIEQ-KDSEKVAAKVNDIIGSLENRKQGFQEDKVDGEWVLCFTRNSQGSPSLQKALPG----DRGFQNFDVGAKKFFNIVQLWGGRVKVLADVSY-EVHPEEPNRLQSTIVAAGLKLGPL-RLPLPLTGRVGYLDFTYQDEDIRVTRGNRGGLFLHMR 810
K L+ ++ T + + ++SE+ A ++++++ L + F DGEW L +RNS+GSP LQKA F NFDV +F+NI +L+GG+ K+ A V+Y EV + R+ IV A +KL L LPLPL + G+LDF Y DED+RVT+GNRGGLF H+R
Sbjct: 83 KAELLSILKETGLGKGEESEEQAKRIDELVSKLADAGTKFDPKVADGEWALVLSRNSKGSPKLQKASNKVEQVGTSFANFDVSKGEFYNIAELFGGKGKLQATVAYGEVEGKSGKRISCDIVDASIKLWKLPTLPLPLRAKGGWLDFLYLDEDMRVTKGNRGGLFFHVR 251
BLAST of mRNA_F-serratus_M_contig1117.1089.1 vs. uniprot
Match: A0A7S0VW87_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VW87_9CRYP) HSP 1 Score: 126 bits (317), Expect = 2.720e-31 Identity = 73/171 (42.69%), Postives = 104/171 (60.82%), Query Frame = 1
Query: 319 EEKTLLMRLILSTSIEQ-KDSEKVAAKVNDIIGSLENRKQGFQEDKVDGEWVLCFTRNSQGSPSLQKALPGDR----GFQNFDVGAKKFFNIVQLWGGRVKVLADVSY-EVHPEEPNRLQSTIVAAGLKLGPL-RLPLPLTGRVGYLDFTYQDEDIRVTRGNRGGLFLHMR 810
E K L+ ++ T + + +++E+ A +++ ++ L + F DGEW L +RNS+GSP LQKA F NFDV +F+NI L+GG+ K+ A V+Y EV ++ R+ IV A +KL L LPLPL + G+LDF Y DED+RVTRGNRGGLF H+R
Sbjct: 83 ETKAELLSMLKETGLGKGEETEEQAKRIDQLVDVLASAGTKFDPKVADGEWALVLSRNSKGSPKLQKASNKAEKVGTSFANFDVSKGEFYNIADLFGGKGKLQATVAYGEVEGQDGRRISCDIVDASVKLWKLPTLPLPLRAKGGWLDFLYLDEDMRVTRGNRGGLFFHVR 253
BLAST of mRNA_F-serratus_M_contig1117.1089.1 vs. uniprot
Match: A0A7S0BAD5_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0BAD5_9DINO) HSP 1 Score: 121 bits (304), Expect = 4.550e-29 Identity = 67/148 (45.27%), Postives = 94/148 (63.51%), Query Frame = 1
Query: 388 AAKVNDIIGSLENRKQG--FQEDKVDGEWVLCFTRNSQGSPSLQK---ALPGDRGFQNFDVGAKKFFNIVQLWGG-RVKVLADVSYEVHPEEPNRLQSTIVAAGLKL-GPLRLPLPLTGRVGYLDFTYQDEDIRVTRGNRGGLFLHMR 810
AAK++ +I LE G F ++ DGEW L FTRN+ GSP+LQK PG F NF V +F N+V+ +G ++ A V+Y E+P+R+ I AGL+L G L++PLPL G+LDF Y D D+R+TRGN+GG+F+H+R
Sbjct: 141 AAKIDQLIKVLEGSPGGRRFSDELADGEWALVFTRNADGSPALQKLSRTKPGGT-FANFVVAQSRFENVVKFFGSDEARLSATVTYRRDAEKPSRISCDITDAGLQLFGWLQIPLPLRAEGGWLDFLYLDPDMRITRGNKGGVFVHVR 287
BLAST of mRNA_F-serratus_M_contig1117.1089.1 vs. uniprot
Match: A0A7S4E9S8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E9S8_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.270e-23 Identity = 63/142 (44.37%), Postives = 84/142 (59.15%), Query Frame = 1
Query: 430 KQGFQEDKVDGEWVLCFTRNSQGSPSLQKAL-------PGDRGFQNFDVGAKKFFNIVQLWGGRVKVLADVSYEVHPEEPNRLQSTIVAAGLKLG--------PLRLPLPLTGRVGYLDFTYQDEDIRVTRGNRGGLFLHMR 810
++ F E K+ G W L + + + + QKAL P D F D G K F N+ +L RV V+ADV+YEV PNRL S IVAA +++ LR+PLPL G +G+LD TY D+ +RVTRGNRGGLF+H+R
Sbjct: 113 RRSFAEAKIQGPWRLKYQLDGKKAQRSQKALAPDKTGHPADSDFITDDKGRKVFRNVARLSKKRVAVVADVAYEVSEGIPNRLLSDIVAASIQIQVGKRFGIPTLRIPLPLKG-LGWLDVTYLDDKLRVTRGNRGGLFVHVR 253
BLAST of mRNA_F-serratus_M_contig1117.1089.1 vs. uniprot
Match: L1IE14_GUITC (PAP_fibrillin domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IE14_GUITC) HSP 1 Score: 97.4 bits (241), Expect = 6.330e-21 Identity = 64/175 (36.57%), Postives = 93/175 (53.14%), Query Frame = 1
Query: 310 SPEEEKTLLMRLILSTSIEQKDSEKVAAKVNDIIGSLEN---RKQGFQEDKVDGEWVLCFTRNSQGSPSLQKALPG--DRG--FQNFDVGAKKFFNIVQLWGGRVKVLADVSYEVHPEEPNRLQSTIVAAGLKLGP-LRLPLPLTGRVGYLDFTYQDEDIRVTRGNRGGLFLHMR 810
S +E K L+ +IL K E+ + + DI +++ K F DGEW L F ++S SP+LQK D G F NFDV F+N + G + A V ++ P + R+ I A + + L +PLPL + G+LDF Y D+D+RVTRGNRGG+F+H+R
Sbjct: 3 SAKESKEKLLDVIL------KGDEQSPSYLQDITSAIQELSASKCKFDSQTADGEWQLVFQQDSSDSPALQKFTRATEDSGKTFANFDVKEGVFYNKASVLSGVADLQATVKFDTVPGKEERISCDITDARVTIANFLTIPLPLRVKGGWLDFLYLDKDLRVTRGNRGGIFVHVR 171
BLAST of mRNA_F-serratus_M_contig1117.1089.1 vs. uniprot
Match: A0A7S0Q407_9EUKA (Hypothetical protein n=2 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q407_9EUKA) HSP 1 Score: 95.1 bits (235), Expect = 3.470e-19 Identity = 60/138 (43.48%), Postives = 78/138 (56.52%), Query Frame = 1
Query: 439 FQEDKVDGEWVLCFTRNSQGSPSLQKALPGDRGFQNFDV---GAKKFFNIVQLWGGRVKVLADVSYE---VHPEEPNRLQSTIVAAG--LKLGP------LRLPLPLTGRVGYLDFTYQDEDIRVTRGNRGGLFLHMR 810
F E V G+W LC+ N+ + QKAL F NF V G K F NI + R++++ADV+Y E P RL S I A L+LG LR+PLPL G G+LD TY + +R+TRGNRGGLF+H+R
Sbjct: 117 FDERAVWGDWQLCWQLNTADATRSQKALSSRPQFSNFMVDEDGTKVFRNIAHVTRSRLRIVADVAYTPLAAGSETPGRLASVISGAHAELRLGRRFGLPRLRIPLPLKGE-GWLDLTYVSDKMRITRGNRGGLFVHLR 253 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1117.1089.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1117.1089.1 >prot_F-serratus_M_contig1117.1089.1 ID=prot_F-serratus_M_contig1117.1089.1|Name=mRNA_F-serratus_M_contig1117.1089.1|organism=Fucus serratus male|type=polypeptide|length=287bp MAKSLLLSAVATAAFSSRCSCGGRSDSVGGNVATAFSLAPAIRSVASAKSback to top mRNA from alignment at F-serratus_M_contig1117:227864..237860+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1117.1089.1 ID=mRNA_F-serratus_M_contig1117.1089.1|Name=mRNA_F-serratus_M_contig1117.1089.1|organism=Fucus serratus male|type=mRNA|length=9997bp|location=Sequence derived from alignment at F-serratus_M_contig1117:227864..237860+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1117:227864..237860+ >mRNA_F-serratus_M_contig1117.1089.1 ID=mRNA_F-serratus_M_contig1117.1089.1|Name=mRNA_F-serratus_M_contig1117.1089.1|organism=Fucus serratus male|type=CDS|length=1722bp|location=Sequence derived from alignment at F-serratus_M_contig1117:227864..237860+ (Fucus serratus male)back to top |