mRNA_F-serratus_M_contig1117.1086.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1117.1086.1
Unique NamemRNA_F-serratus_M_contig1117.1086.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1117.1086.1 vs. uniprot
Match: D8LJN0_ECTSI (Serine/Threonine Dehydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJN0_ECTSI)

HSP 1 Score: 531 bits (1369), Expect = 1.230e-186
Identity = 267/347 (76.95%), Postives = 299/347 (86.17%), Query Frame = 1
Query:  130 MQAAGSQEGEPLQAVSIAGIREAAVRIAPHVNATPVLTSSALNSMSGGRQVFFKCELFQKTGSFKARGACNAVLLTPPECGDVVTHSSGNHAQALAWAAAAKGINAHIVMPNNSIAVKVEAVRGYGARVTFCENTKTGREDTAAAVVSRLPNSAFVHPYNDPRVQCGQGTVGLELIQQVKEMTGGQSLDAVIVPIGGGGLISGVSTAVKALSPGIRVIGAEPNMAADAFRSKESGTLCGHEGNSLPNTIADGLRTTLGSKTWPIVRDAVDEIVTVSEEEIRRWMRIVYERMKLVIEPSAAVGVAALMSPRVRGMPSDIKRVGVVLCGGNVDVNALQELLVSGAEVSP 1170
            M+ A  +     +AVSIAGIR+AA RI PHV+ TPV+T  AL+ MSGGR+VF KCELFQKTGSFKARGACNAVLLTPPEC D+VTHSSGNHAQALAWAA+ KG+NAHIVMP+NS+AVKV AVR YGA +T CENTK+GRE TAAAVVS  P S  +HPYNDPRVQCGQGTVGLEL+QQVKE TGG  LDAV+VP+GGGGLI+GV+TAVKAL PGIRVIGAEP+ AADAFRSK+SG+L GH+   +P+TIADGLRTTLGS TWP+VRD+VDEIVTVSEEEIR WMR+VYERMKLVIEPSAAVGVAALMSPRVRGMP D+KRVGVVLCGGNVDV  LQ+LL       P
Sbjct:    1 MEEASHEPSAEPEAVSIAGIRQAAARIGPHVHYTPVMTCRALDEMSGGREVFLKCELFQKTGSFKARGACNAVLLTPPECRDIVTHSSGNHAQALAWAASVKGVNAHIVMPHNSMAVKVAAVRDYGASITLCENTKSGRETTAAAVVSGHPLSTLIHPYNDPRVQCGQGTVGLELVQQVKEQTGGAGLDAVVVPVGGGGLITGVATAVKALCPGIRVIGAEPSKAADAFRSKQSGSLQGHDCEGMPDTIADGLRTTLGSTTWPVVRDSVDEIVTVSEEEIRLWMRVVYERMKLVIEPSAAVGVAALMSPRVRGMPQDVKRVGVVLCGGNVDVTLLQDLLAGDGNPLP 347          
BLAST of mRNA_F-serratus_M_contig1117.1086.1 vs. uniprot
Match: D7FHM2_ECTSI (Serine Racemase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHM2_ECTSI)

HSP 1 Score: 479 bits (1232), Expect = 1.720e-165
Identity = 243/335 (72.54%), Postives = 285/335 (85.07%), Query Frame = 1
Query:  145 SQEGEPLQAVSIAGIREAAVRIAPHVNATPVLTSSALNSMSGGRQVFFKCELFQKTGSFKARGACNAVLLTPPECGDVVTHSSGNHAQALAWAAAAKGINAHIVMPNNSIAVKVEAVRGYGARVTFCENTKTGREDTAAAVVSRLPNSAFVHPYNDPRVQCGQGTVGLELIQQVKEMTGGQSLDAVIVPIGGGGLISGVSTAVKALSPGIRVIGAEPNMAADAFRSKESGTLCGH-EGNSLPNTIADGLRTTLGSKTWPIVRDAVDEIVTVSEEEIRRWMRIVYERMKLVIEPSAAVGVAALMSPRVRGMPSDIKRVGVVLCGGNVDVNALQELL 1146
            + +G     +S+AGIREAA RI+PH   TPVLT  ALN MSG R+VFFKCELFQKTGSFKARGACNAVLLTPPEC  VVTHSSGNHAQALAWAA+ +GI AHIVMP + +AVKV+AVRGYGA VT CEN+K+ RE TAA +VS+LP S+ +H  ND RVQCG GT+GLEL+ QVK++TGG  LDAVIV IGGGGLISGV+TAVKAL P  R+IGA+P  AADAF+SK+SGTLC   EG +LP+TIADGLRT+LG+K WP+VRD+VDEIVTVSE++IR WM +VY+RMKLVIEPSAAVGVAALMSP+VR MPS++++VGVVLCGGNVDV  LQ+LL
Sbjct:   28 ASDGSSPAVLSLAGIREAADRISPHTQITPVLTCGALNEMSG-REVFFKCELFQKTGSFKARGACNAVLLTPPECPGVVTHSSGNHAQALAWAASVRGIPAHIVMPRSCMAVKVDAVRGYGASVTLCENSKSSRESTAADIVSKLPGSSLIHSSNDARVQCGIGTIGLELVSQVKDLTGGADLDAVIVTIGGGGLISGVTTAVKALCPNARIIGAQPEKAADAFKSKQSGTLCSPAEGEALPDTIADGLRTSLGNKAWPVVRDSVDEIVTVSEDDIRVWMGVVYKRMKLVIEPSAAVGVAALMSPQVRAMPSEMRKVGVVLCGGNVDVTLLQDLL 361          
BLAST of mRNA_F-serratus_M_contig1117.1086.1 vs. uniprot
Match: A0A835Z2N3_9STRA (Serine/Threonine dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2N3_9STRA)

HSP 1 Score: 333 bits (854), Expect = 1.830e-106
Identity = 200/396 (50.51%), Postives = 242/396 (61.11%), Query Frame = 1
Query:  172 VSIAGIREAAVRIAPHVNATPVLTSSALNSMSG-GRQVFFKCELFQKTGSFKARGACNAVLLTPPECGDVVTHSSGNHAQALAWAAAAKGINAHIVMPNNSIAVKVEAVRG---------------------YGARVTFCENTKTGREDTAAAVVSRLPNSAFVHPYNDPRVQCGQGTVGLELIQQVKEMTGGQSLDAVIVPIGGGGLISGVSTAVKALSPGIRVIGAEPNMAADAFRSKES---GTLCGHEGNS----------------------------------------------LPNTIADGLRTTLGSKTWPIVRDAVDEIVTVSEEEIRRWMRIVYERMKLVIEPSAAVGVAALMSPRVRGMPSDIKRVGVVLCGGNVDVNALQELL 1146
            V +A I+ AA RI P+V+ TPV+T   ++ ++G GRQ+ FKCELFQKTGSFKARGACNA LL PP C  VVTHSSGNHAQALAWAA  +G+ AH VMPN++ A                             YGA V  C  +   R  TAAA+V R  ++  VH  NDPRV  GQGTVGLEL++QV+EM GG  LDAVIVP+GGGGL++GV+ AV+AL P   VIGAEP+ A DA RSK     G  C + G++                                              LP+T+ADGLRT LGS TWP+VRD VD IVTVSE+EIR  +R+VYER+KL IEPSAAVGVAA +S  V  MP  ++R+GVVLCGGNVD+  L  LL
Sbjct:  107 VCLASIQAAARRIEPYVHRTPVMTCEGIDKLAGHGRQLIFKCELFQKTGSFKARGACNATLLLPPSCRAVVTHSSGNHAQALAWAAQVRGVRAHCVMPNDASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGADVVLCTPSYGARVSTAAALV-REHDAVLVHSSNDPRVIDGQGTVGLELVEQVREMCGGADLDAVIVPVGGGGLLAGVAVAVRALCPRALVIGAEPSAADDAARSKVRFCCGVYCAYAGSAMCLEVLVRRFRSVSEVRCALAIGAQPSAADGAARSKAAGMLLEHDTLPDTLADGLRTVLGSWTWPVVRDQVDCIVTVSEDEIRASLRLVYERLKLAIEPSAAVGVAAALSDAVAAMPG-LRRIGVVLCGGNVDMAQLARLL 500          
BLAST of mRNA_F-serratus_M_contig1117.1086.1 vs. uniprot
Match: A0A7S2Y2H5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2H5_9STRA)

HSP 1 Score: 325 bits (833), Expect = 2.110e-105
Identity = 174/335 (51.94%), Postives = 229/335 (68.36%), Query Frame = 1
Query:  172 VSIAGIREAAVRIAPHVNATPVLTSSALNSMSGG-RQVFFKCELFQKTGSFKARGACNAVLLTPPECGD-------VVTHSSGNHAQALAWAAAAKGINAHIVMPNNSIAVKVEAVRGYGARVTFCENTKTGREDTAAAVVSRLPNSAFVHPYNDPRVQCGQGTVGLELIQQVKEMTGGQSLDAVIVPIGGGGLISGVSTAVKALSPGIRVIGAEPNMAADAFRSKESGTLCGHEGNSLPNTIADGLRTTLGSKTWPIVRDAVDEIVTVSEEEIRRWMRIVYERMKLVIEPSAAVGVAALMSPRVRGMPSDIKRVGVVLCGGNVDVNALQELLVS 1152
            +S   I+EA  RI   ++ TPVL SS+++ M+G  R++FFKCELFQK GSFK RGA NAV+L   +  +       V+T SSGN  QA+AW    +G+ AH+VMPN+S   K++AV GYGA +  CE T   R          L  + +VHP+ DP V CGQGTVGLEL++QV+EMTGG  +DAV+VP+GGGGL SGV+ AVKA+SPG +VIG EP MA+ A  S+E+G L     NSLPNT+ADGLR ++G  TWPI+RD VD++VTVSE +I+  +++V  RMKL IEPSAAV +AA +          + R+GV+LCGGNVD++ L  LL S
Sbjct:   16 ISFPNIQEAHKRIQGILHRTPVLKSSSISKMAGHERELFFKCELFQKAGSFKPRGALNAVILAENDADEKGRKLQNVITQSSGNMGQAVAWVCQNRGLTAHVVMPNDSAQCKMDAVAGYGANIILCEPTIEARNKATEKAQEEL-GAKYVHPHQDPHVVCGQGTVGLELVEQVREMTGGMDMDAVLVPVGGGGLCSGVAVAVKAMSPGTKVIGVEPEMASSAKPSREAGNLISM--NSLPNTLADGLRVSVGPITWPIMRDVVDDVVTVSEAQIQDTLKLVVSRMKLAIEPSAAVALAAALYSEDIKKKEGLHRIGVILCGGNVDMSRLSNLLSS 347          
BLAST of mRNA_F-serratus_M_contig1117.1086.1 vs. uniprot
Match: A0A4D9D9L6_9STRA (PALP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9L6_9STRA)

HSP 1 Score: 317 bits (812), Expect = 9.290e-102
Identity = 185/334 (55.39%), Postives = 227/334 (67.96%), Query Frame = 1
Query:  172 VSIAGIREAAVRIAPHVNATPVLTSSAL--------NSMSGGRQVFFKCELFQKTGSFKARGACNAVLLTPPECGDVVTHSSGNHAQALAWAAAAKGINAHIVMPNNSIAVKVEAVRGYGARVTFCENTKTGREDTAAAVVSRLPNSAFVHPYNDPRVQCGQGTVGLELIQQVKEMTGGQSLDAVIVPIGGGGLISGVSTAVKALSPGIRVIGAEPNMAADAFRSKESGTLCGHEGNSLPNTIADGLRTTLGSKTWPIVR-DAVDEIVTVSEEEIRRWMRIVYERMKLVIEPSAAVGVAALMS----PRVRGMPSDIKRVGVVLCGGNVDVNAL 1134
            + +A ++EAA  I   V  TPVL   A+        ++ S   + FFKCELFQKTGSFK RGA NAV   P    DVVTHSSGNHAQALAWAA  KG+ AHIVMP  +  VKV+AV+GYG +V  CE T   R   A  +V+     A VHP +D  V  GQGTV LE ++QV+E TGG+SLDA+I+P+GGGGL+ G++ A KAL P I++IGAEP+M  DAFRSK +G LC H   S P +IADGL T LG +T+PIV  D VD I+TVSE+EI + MR+VYERMKLVIEPSA VGVA  M       V G+    +RVGVVLCGGN+D++ L
Sbjct:   18 IDLALVQEAAQTIKASVQRTPVLRCHAIEHAALRNDSNSSFKPEFFFKCELFQKTGSFKVRGALNAVAHLPSTVTDVVTHSSGNHAQALAWAARTKGLRAHIVMPRTAPKVKVDAVKGYGGQVYLCEPTVEARWAMAGELVAST-GGALVHPSDDYPVMAGQGTVALEFLEQVEEETGGKSLDALIIPVGGGGLLGGMAVAAKALHPHIKIIGAEPSMVDDAFRSKAAGHLCLHPSPS-PRSIADGLLTVLGQRTYPIVSSDKVDAIITVSEQEIAQAMRLVYERMKLVIEPSAGVGVAVAMRGDELEAVLGI--GCRRVGVVLCGGNLDMDRL 347          
BLAST of mRNA_F-serratus_M_contig1117.1086.1 vs. uniprot
Match: A0A3L7TMT6_9BACT (Pyridoxal-phosphate dependent enzyme n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7TMT6_9BACT)

HSP 1 Score: 311 bits (796), Expect = 3.520e-100
Identity = 178/328 (54.27%), Postives = 225/328 (68.60%), Query Frame = 1
Query:  157 EPLQAVSIAGIREAAVRIAPHVNATPVLTSSALNSMSGGRQVFFKCELFQKTGSFKARGACNAVLLTPPECG--DVVTHSSGNHAQALAWAAAAKGINAHIVMPNNSIAVKVEAVRGYGARVTFCENTKTGREDTAAAVVSRLPNSAFVHPYNDPRVQCGQGTVGLELIQQVKEMTGGQSLDAVIVPIGGGGLISGVSTAVKALSPGIRVIGAEPNMAADAFRSKESGTLCGHEGNSLPNTIADGLRTTLGSKTWPIVRDAVDEIVTVSEEEIRRWMRIVYERMKLVIEPSAAVGVAALMSPRVRGMPSDIKRVGVVLCGGNVDVNAL 1134
            +P  A S+A +R A  R+AP ++ TPVLTS+ L+ +SG R +FFKCE+FQ+TGSFK RGA NAV +         VVTHSSGNHAQALA AA+ +GI AH+VMP+NS  +K  AVRGYGAR+  C  T   RE TAA V+     S  + PYN   V  GQGT+ LEL++Q  +      LDA+IVP+GGGGLISG++ A K ++P IR+IGAEP +A DA  SK+SG++   +    P TIADGLR  LG  T+PIVRD VDEI  VSE+EIR  MR+V+ERMK+ IEPSAAVGVA         +P   +RVGV+LCGGNVD+  +
Sbjct:    7 QPAYATSLALVRAAQERVAPFIHRTPVLTSATLDRLSG-RSLFFKCEIFQRTGSFKFRGATNAVRMLDDATAARGVVTHSSGNHAQALALAASMRGIAAHVVMPSNSAEIKKAAVRGYGARIIECVPTLEAREATAARVLEETGGS-MIPPYNHANVIAGQGTIALELLEQCAD------LDAIIVPLGGGGLISGITIAAKGINPKIRIIGAEPALAGDAALSKKSGSI---QPPMEPVTIADGLRAALGPLTFPIVRDLVDEIALVSEDEIRAHMRLVWERMKITIEPSAAVGVAVACXXGAAALP---QRVGVILCGGNVDMQTV 320          
BLAST of mRNA_F-serratus_M_contig1117.1086.1 vs. uniprot
Match: A0A2E2Y4P8_9PLAN (Serine dehydratase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E2Y4P8_9PLAN)

HSP 1 Score: 310 bits (795), Expect = 5.150e-100
Identity = 178/328 (54.27%), Postives = 228/328 (69.51%), Query Frame = 1
Query:  157 EPLQAVSIAGIREAAVRIAPHVNATPVLTSSALNSMSGGRQVFFKCELFQKTGSFKARGACNAVL-LTPPECGD-VVTHSSGNHAQALAWAAAAKGINAHIVMPNNSIAVKVEAVRGYGARVTFCENTKTGREDTAAAVVSRLPNSAFVHPYNDPRVQCGQGTVGLELIQQVKEMTGGQSLDAVIVPIGGGGLISGVSTAVKALSPGIRVIGAEPNMAADAFRSKESGTLCGHEGNSLPNTIADGLRTTLGSKTWPIVRDAVDEIVTVSEEEIRRWMRIVYERMKLVIEPSAAVGVAALMSPRVRGMPSDIKRVGVVLCGGNVDVNAL 1134
            EP  A ++A I EA  RI  HV+ TPV+T  AL+++SG  Q+FFKCE  QK G+FK RGA NAVL LT  E  + VVTHSSGNHAQA+A AA ++GI AHIVMP+N+ A+K  AV GYGARV  CE T   RE TAA V+S    ++F+HPYND RV  GQGT  +EL+++V        LDA+I P+GGGGLISGVS A + L+PGI+V+GAEP  A DA RS E+G     +    PNTIADGL T+LG  TWPI+RD V+ I+ V + EI   M++ ++R KLVIEPSAA  +AA++   +  +P  +KRVG++L GGNVD+  L
Sbjct:    2 EPTYACNLAAIEEARERIREHVHQTPVITCQALDALSG-HQLFFKCENLQKVGAFKFRGATNAVLSLTEAEAANGVVTHSSGNHAQAVALAARSRGIAAHIVMPSNAPAIKRAAVEGYGARVIPCEPTLAARESTAAEVISET-GASFIHPYNDQRVIAGQGTTAIELLEEVP------GLDAIITPVGGGGLISGVSIACRELAPGIKVLGAEPTGADDAARSMEAGEWIPQQS---PNTIADGLLTSLGDLTWPIIRDHVERIIRVDDTEIISAMQLFWQRAKLVIEPSAATALAAVLGDSLDDLP--LKRVGIILSGGNVDLEEL 316          
BLAST of mRNA_F-serratus_M_contig1117.1086.1 vs. uniprot
Match: A0A2E3RP26_9BACT (Serine dehydratase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E3RP26_9BACT)

HSP 1 Score: 309 bits (791), Expect = 2.130e-99
Identity = 177/324 (54.63%), Postives = 226/324 (69.75%), Query Frame = 1
Query:  169 AVSIAGIREAAVRIAPHVNATPVLTSSALNSMSGGRQVFFKCELFQKTGSFKARGACNAVLLTPPECG--DVVTHSSGNHAQALAWAAAAKGINAHIVMPNNSIAVKVEAVRGYGARVTFCENTKTGREDTAAAVVSRLPNSAFVHPYNDPRVQCGQGTVGLELIQQVKEMTGGQSLDAVIVPIGGGGLISGVSTAVKALSPGIRVIGAEPNMAADAFRSKESGTLCGHEGNSLPNTIADGLRTTLGSKTWPIVRDAVDEIVTVSEEEIRRWMRIVYERMKLVIEPSAAVGVAALMSPRVRGMPSDIKRVGVVLCGGNVDVNAL 1134
            A +I  I  A  RI PHVN TPV T S ++ M+G R++ FKCE FQK G+FK RGACNAV+    +     VVTHSSGNHAQALA AA  +GI AHIVMP+N+  VK  AV GYGA +  CE     RE TAA V SR   +  + PYN P +  GQGT+ +EL++QV        LDA++VP+GGGG+++GV+ A KA+ PGIRV  AEP  A DAFRSK+SG++   E    P+TIADGLRTTLG+ T+P++RD V++++ VSE+EI   MR+V+ERMKLVIEPSA VG+AA +S R R +   +  VGVVLCGGNVD++ L
Sbjct:   10 AATIDDILGANRRIDPHVNRTPVHTCSTIDGMAG-RKLHFKCENFQKIGAFKFRGACNAVMKLEEDAARHGVVTHSSGNHAQALALAARIRGIPAHIVMPSNAPGVKRRAVEGYGAIIYECEPNVRSRETTAAEVASRT-GATMIEPYNHPDIIAGQGTMSVELLEQVPH------LDALVVPVGGGGMLAGVTIAAKAIKPGIRVFAAEPEAADDAFRSKQSGSI---EPMENPDTIADGLRTTLGTLTFPVLRDLVEQVLPVSEQEIVSAMRLVWERMKLVIEPSAGVGIAAALSDRFRAIDG-MDHVGVVLCGGNVDLDDL 321          
BLAST of mRNA_F-serratus_M_contig1117.1086.1 vs. uniprot
Match: A0A424KW82_9BACT (Pyridoxal-phosphate dependent enzyme n=1 Tax=Phycisphaera sp. TMED9 TaxID=1986611 RepID=A0A424KW82_9BACT)

HSP 1 Score: 308 bits (789), Expect = 4.270e-99
Identity = 180/337 (53.41%), Postives = 228/337 (67.66%), Query Frame = 1
Query:  142 GSQEGEPLQAVSIAGIREAAVRIAPHVNATPVLTSSALNSMSGGRQVFFKCELFQKTGSFKARGACNAVL-LTPPECGD-VVTHSSGNHAQALAWAAAAKGINAHIVMPNNSIAVKVEAVRGYGARVTFCENTKTGREDTAAAVVSRLPNSAFVHPYNDPRVQCGQGTVGLELIQQVKEMTGGQSLDAVIVPIGGGGLISGVSTAVKALSPGIRVIGAEPNMAADAFRSKESGTLCGHEGNSLPNTIADGLRTTLGSKTWPIVRDAVDEIVTVSEEEIRRWMRIVYERMKLVIEPSAAVGVAALMSPRVRGMPSDIKRVGVVLCGGNVDVNALQELL 1146
            GS    P    ++  IR AA RI PHV+ TPVLT  A++ ++G  +VF KCE  QK G+FKARGA NAV  LT  E    VVTHSSGNHAQALAWAA  +GI AHIVMP N+ AVK +AV GYG  V  CE T   R +T   V         + PY+D RV  GQGT+GLEL+ QV +      LDA++VP+GGGG+I+G++   KALSP + ++GAEP +  DA RS+ SG +  H G+    TIADGLRTTLG +T+P++R+ VD+I+TV E EIR+ +R+V ER KLVIEPSAAVG+AA  SP  R      +R+GVVLCGGN+D++AL  LL
Sbjct:    3 GSDSSRP----NLDAIRTAARRIEPHVHRTPVLTCQAIDEVAGC-EVFLKCENLQKVGAFKARGASNAVFSLTDAEAEPGVVTHSSGNHAQALAWAAGRRGIPAHIVMPTNAPAVKKKAVLGYGGIVHDCEPTLESRLETCRKVAEDT-GGTVIPPYDDDRVIAGQGTIGLELLGQVPD------LDAIVVPVGGGGMIAGIAICAKALSPRLEILGAEPELVDDAARSRLSGRIEPHAGDPT-RTIADGLRTTLGKRTFPVIRELVDDIITVPETEIRQGLRLVMERAKLVIEPSAAVGIAATRSPAFRARGH--RRIGVVLCGGNLDLDALPSLL 324          
BLAST of mRNA_F-serratus_M_contig1117.1086.1 vs. uniprot
Match: A0A6P8ITW0_ACTTE (L-serine ammonia-lyase n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8ITW0_ACTTE)

HSP 1 Score: 307 bits (787), Expect = 3.440e-98
Identity = 167/344 (48.55%), Postives = 235/344 (68.31%), Query Frame = 1
Query:  121 RAKMQAAGSQEGEPLQAVSIAGIREAAVRIAPHVNATPVLTSSALNSMSGGRQVFFKCELFQKTGSFKARGACNAVLLTPPECGD-----VVTHSSGNHAQALAWAAAAKGINAHIVMPNNSIAVKVEAVRGYGARVTFCENTKTGREDTAAAVVSRL-PNSAFVHPYNDPRVQCGQGTVGLELIQQVKEMTGGQSLDAVIVPIGGGGLISGVSTAVKALSPGIRVIGAEPNMAADAFRSKESGTLCGHEGNSLPNTIADGLRTTLGSKTWPIVRDAVDEIVTVSEEEIRRWMRIVYERMKLVIEPSAAVGVAALMSPRVRGMPSDIKRVGVVLCGGNVDVNAL 1134
            +  ++ A S EG     V++  +++A+VRIAP +N TPV+T   L+ M+G + ++FKCE+FQK G+FK RGA NAVL     C +     VVTHSSGNH QALA AA  KG+ AHIVMPNN+ A+K  AV+ YGA +  CE ++  RE  AA V+    PNS  V PY++  +  GQGT+ LEL++QV +      LDA++VP+GGGG++SG+  A K + P I++  AEP +A D  +S  +G      G   P T+ADGL+T+LG  TWPI+RD +D+++TV+E EI   MR+V+ERMKLVIEPSAAV VAA++S R RG   ++++V V+LCGGNV++++L
Sbjct:   31 KTAIRMASSMEGNTE--VTLKDVQDASVRIAPFINRTPVMTCGTLDKMAG-KSLYFKCEIFQKVGAFKFRGAMNAVLNITENCSEAELPVVVTHSSGNHGQALALAAKVKGLKAHIVMPNNAPAIKKAAVKDYGANIVECEISQQDREAAAARVLKETGPNSYLVPPYDNKHIIAGQGTMALELLEQVPD------LDAIVVPVGGGGMLSGICVAAKGIKPSIKIFAAEPLLADDCAKSFAAGKRIPLPGP--PATVADGLKTSLGFITWPIIRDNIDDVITVTESEIISTMRLVWERMKLVIEPSAAVAVAAVLSERFRGENKNVEKVAVILCGGNVNLDSL 363          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1117.1086.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJN0_ECTSI1.230e-18676.95Serine/Threonine Dehydratase n=2 Tax=Ectocarpus Ta... [more]
D7FHM2_ECTSI1.720e-16572.54Serine Racemase n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
A0A835Z2N3_9STRA1.830e-10650.51Serine/Threonine dehydratase n=1 Tax=Tribonema min... [more]
A0A7S2Y2H5_9STRA2.110e-10551.94Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9D9L6_9STRA9.290e-10255.39PALP domain-containing protein n=2 Tax=Monodopsida... [more]
A0A3L7TMT6_9BACT3.520e-10054.27Pyridoxal-phosphate dependent enzyme n=1 Tax=Planc... [more]
A0A2E2Y4P8_9PLAN5.150e-10054.27Serine dehydratase n=1 Tax=Planctomycetaceae bacte... [more]
A0A2E3RP26_9BACT2.130e-9954.63Serine dehydratase n=1 Tax=Phycisphaerae bacterium... [more]
A0A424KW82_9BACT4.270e-9953.41Pyridoxal-phosphate dependent enzyme n=1 Tax=Phyci... [more]
A0A6P8ITW0_ACTTE3.440e-9848.55L-serine ammonia-lyase n=1 Tax=Actinia tenebrosa T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1117contigF-serratus_M_contig1117:199001..202275 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score528.9
Seed ortholog evalue1.8e-147
Seed eggNOG ortholog2880.D8LJN0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.serine racemase
EggNOG OGsCOG1171@1,KOG1251@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size1318
Cds size1047
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1117.1086.1prot_F-serratus_M_contig1117.1086.1Fucus serratus malepolypeptideF-serratus_M_contig1117 199143..202146 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929003.8026788-UTR-F-serratus_M_contig1117:199000..1991421622929003.8026788-UTR-F-serratus_M_contig1117:199000..199142Fucus serratus maleUTRF-serratus_M_contig1117 199001..199142 -
1690962664.824917-UTR-F-serratus_M_contig1117:199000..1991421690962664.824917-UTR-F-serratus_M_contig1117:199000..199142Fucus serratus maleUTRF-serratus_M_contig1117 199001..199142 -
1622929003.8371449-UTR-F-serratus_M_contig1117:202146..2022751622929003.8371449-UTR-F-serratus_M_contig1117:202146..202275Fucus serratus maleUTRF-serratus_M_contig1117 202147..202275 -
1690962664.8508341-UTR-F-serratus_M_contig1117:202146..2022751690962664.8508341-UTR-F-serratus_M_contig1117:202146..202275Fucus serratus maleUTRF-serratus_M_contig1117 202147..202275 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929003.8153653-CDS-F-serratus_M_contig1117:199142..1999101622929003.8153653-CDS-F-serratus_M_contig1117:199142..199910Fucus serratus maleCDSF-serratus_M_contig1117 199143..199910 -
1690962664.8346214-CDS-F-serratus_M_contig1117:199142..1999101690962664.8346214-CDS-F-serratus_M_contig1117:199142..199910Fucus serratus maleCDSF-serratus_M_contig1117 199143..199910 -
1622929003.825912-CDS-F-serratus_M_contig1117:201867..2021461622929003.825912-CDS-F-serratus_M_contig1117:201867..202146Fucus serratus maleCDSF-serratus_M_contig1117 201868..202146 -
1690962664.8428354-CDS-F-serratus_M_contig1117:201867..2021461690962664.8428354-CDS-F-serratus_M_contig1117:201867..202146Fucus serratus maleCDSF-serratus_M_contig1117 201868..202146 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1117.1086.1

>prot_F-serratus_M_contig1117.1086.1 ID=prot_F-serratus_M_contig1117.1086.1|Name=mRNA_F-serratus_M_contig1117.1086.1|organism=Fucus serratus male|type=polypeptide|length=349bp
MQAAGSQEGEPLQAVSIAGIREAAVRIAPHVNATPVLTSSALNSMSGGRQ
VFFKCELFQKTGSFKARGACNAVLLTPPECGDVVTHSSGNHAQALAWAAA
AKGINAHIVMPNNSIAVKVEAVRGYGARVTFCENTKTGREDTAAAVVSRL
PNSAFVHPYNDPRVQCGQGTVGLELIQQVKEMTGGQSLDAVIVPIGGGGL
ISGVSTAVKALSPGIRVIGAEPNMAADAFRSKESGTLCGHEGNSLPNTIA
DGLRTTLGSKTWPIVRDAVDEIVTVSEEEIRRWMRIVYERMKLVIEPSAA
VGVAALMSPRVRGMPSDIKRVGVVLCGGNVDVNALQELLVSGAEVSPE*
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mRNA from alignment at F-serratus_M_contig1117:199001..202275-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1117.1086.1 ID=mRNA_F-serratus_M_contig1117.1086.1|Name=mRNA_F-serratus_M_contig1117.1086.1|organism=Fucus serratus male|type=mRNA|length=3275bp|location=Sequence derived from alignment at F-serratus_M_contig1117:199001..202275- (Fucus serratus male)
GTCAACCCGAAGACAAGTATAATAGTACAATCGGTATCGACAAGCAGAGA GTGTGCGTGATTATATTAAAGCTCCGGCGTGGAGGTATTTATTATCAGCT TGAGAGCTCAGGGCTAGTGCAGGGCTAAGATGCAGGCAGCTGGTTCCCAG GAAGGCGAACCTCTACAAGCTGTGTCGATTGCCGGAATCCGGGAGGCTGC GGTGCGCATAGCGCCTCACGTGAATGCTACGCCAGTGCTGACGTCTAGCG CTCTCAATAGCATGAGCGGAGGTCGTCAAGTGTTCTTCAAGTGCGAGCTT TTCCAGAAGACTGGTTCATTCAAGGCTAGAGGAGCATGCAATGCGGTCCT GCTGACACCACCCGAGTGCGGGGACGTGGTGACGCACTCCAGCGGTAACC ATGCACAGGTTATTTTCTGTGTTGAGAGTATCCATGATTCTGCGAGCGGT TGACCTGTATGTCGACGGTCCAAAGCGCACGAGTCCCCCGTTGCTTTTGA CCGCTTCTCAAGTCGAGGCAAATTGATACACGCAGTGTTGACTATTATCC TTCAAAAATGTCAGGCATAATATCGATCCTGATAAGAAAACAGAAAATAT GCGTCTTGCTATTTGGACCACTTGTCGAAGTACTCCTGTACCATGGTACC ATGTATCAAAAGTCTCAGATTATCAACTGTACTCGTACCAGCGTAGGGAT CTTATCATGTATCCACACCCAGAAGTGGCAAAGCCCAAACGGATTGCCCA TAAATATTGTGGGCACTCTCAACAATGGCATCGCCCTAGGGCCTAAAGCT ATTAATAACATTAGACTCAAAGAGAGTAACTTTACGCTCGGTAGATTTCG AGTCAACGACCATAGATTGCCGTCGACGCCAATTTTTATGGGACTTACAA GACCAAGGAGGCAAATACAAGTGTTTGTGTAACGTCCCCCAGATACAACT TAACGTGTATCTGCCAAACGTGATGTAGATCCGGATGAGTATAACCGCTT CCTGGATCCTCTCTCCCGTTGAGAGCCGGTATTTGGACCTACGTAGATTT ACAGCTGCGTGAACCTAGGGGACGGATAAGGCCTATCCCCGCGGTTTCCG CCCTGCGACGGGCTCGGTGATGGCACGAGGACAGCACAGAGGGTTCTTCT ACGAAGAGAAAAATGGACGATTCGACGGATGTAGAAATTGGTAGCTTGTA GATTTTGGGTACGGCATCTGACATGCGCCAGTGTTTGTTGTTGATAATAA ATAGGTCCCCCCCGGCAGGCGTAGTGCGTGTAGGTAGCTGTGTTTTGTGT GTTTTCTTCCCATCCATTCTGGACATCAAGTTGGACGTACCAGCCGGGGT CACACAGGAGGAAGGTCACACAGGATTTTTCATCCACCTTCCTTCTGCGG TGCGTGCCTTGATTTTTGTCGCGAGAAGGATTCAGCCTTTCCTTTCCCTC ATCGACCGTGAAGTCGAATTTCGTGTACTAACGAATTAATCGTTCTCCAC CCGTTGGGCATTTTTATTTTGGTTTTTTAGTTTCTAGTGAGAAAAATCCC GTTTGCCGGGATCTAACTCACGTCCCAACGTGTCAGAAGGTTACGAGGTG CCTACTGAGCTACCGGGGTCGACCGGCTTGAGAATATGATTATGTAGCAG TTGTAGTACGTCAATCTTGCCCATGATGTGTTTAGTCTATGGTAGACTAG AGTAAGAGAACATCCCGACCCACGCAAAATAGAAAACTTTCAAAGCGGCC CCGTTCGTCTCCGTCCCAGCAGCGTACTACTAAGTACACATGCTCGCTCG CAGTGGGATATCATATGATATGATAGTATCATACGTGTCATACAACAGCG GGCAGTTACTGCTTCTGTATGTATGATATGTTCTGTACGCTATGTGTACG ATATGCAAGCACAAGCCGATAGGCAGCAACGACAACCGATCTTGCTATAC TTTTGCGCAGAAAAGTCTCGCCGTGTCATATCAGAGCTTGATGGCTCTCT TGGGGTGGCTCTGGCCTCCTGTGAACGGCCTAGTGGTGACTGCTGCAGCT AGCCCCGAGGCCCAAGACTACTGACGCTAGCCCCGGGGGTGCTGTCCTTG TGCCATCGCCGAGACAACCTACCGCAGTACGGAAACCCTGGGGATAGGCC TTATCTTTCCCCTAGGTTCACGCAGCTGTGAACCTATGTATGTCCAAATA CCGGCTCCCCTCTTACGTTAGGATGGATAGACAGCCATAATGTCTATGGC TACTCCCAAACATTCTCATCGATCAATCACAGCGCTAATGACATTGCCGA GCGACTGCACCACCCATTTCATCTCTTCGACAAACCTTCTTGCATTTGAA CCTTTTTTGTCGCAGGCTCTCGCGTGGGCAGCAGCAGCGAAGGGCATCAA TGCCCACATCGTGATGCCGAACAACTCCATCGCCGTCAAGGTTGAGGCAG TTCGCGGCTACGGCGCGAGGGTGACTTTCTGTGAGAACACCAAAACCGGA CGAGAAGACACCGCGGCCGCCGTTGTGTCGAGACTGCCCAACTCGGCTTT CGTTCATCCCTACAATGATCCCAGAGTGCAGTGCGGCCAGGGCACGGTCG GTTTGGAGCTGATCCAGCAGGTGAAGGAGATGACAGGAGGCCAAAGCCTT GACGCAGTTATCGTGCCAATCGGCGGCGGTGGACTGATTAGCGGCGTGTC GACAGCCGTCAAGGCCCTCAGCCCGGGCATCCGGGTCATCGGAGCGGAGC CGAACATGGCGGCGGACGCGTTTAGGTCCAAGGAGAGCGGGACGCTGTGT GGGCACGAGGGCAATTCGTTGCCTAATACCATTGCAGATGGTTTGCGGAC CACTTTAGGCAGCAAAACATGGCCTATCGTACGAGACGCCGTCGACGAAA TCGTCACCGTTTCGGAAGAGGAGATTCGGCGATGGATGCGAATTGTCTAT GAACGGATGAAACTCGTGATCGAGCCCAGCGCAGCTGTCGGGGTAGCCGC GCTCATGTCGCCGCGAGTGCGGGGCATGCCAAGCGACATCAAGAGGGTAG GGGTGGTGCTGTGCGGGGGAAACGTCGACGTGAACGCGCTGCAAGAACTC CTTGTGTCAGGAGCTGAAGTATCGCCAGAATGACACCGGCCATCTTGCAT GGGTCAGTACTGAATAGTTAGGACGTTGAGCTTGGAACCTCCGTACGGAC TTTGAGGAGCACAAACCATATTCCTTTTGAATAGCGTTGAGATTACCTGA AAATGTCGAGGAAGATTATGCTTTT
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Coding sequence (CDS) from alignment at F-serratus_M_contig1117:199001..202275-

>mRNA_F-serratus_M_contig1117.1086.1 ID=mRNA_F-serratus_M_contig1117.1086.1|Name=mRNA_F-serratus_M_contig1117.1086.1|organism=Fucus serratus male|type=CDS|length=2094bp|location=Sequence derived from alignment at F-serratus_M_contig1117:199001..202275- (Fucus serratus male)
ATGCAGGCAGCTGGTTCCCAGGAAGGCGAACCTCTACAAGCTGTGTCGAT
TGCCGGAATCCGGGAGGCTGCGGTGCGCATAGCGCCTCACGTGAATGCTA
CGCCAGTGCTGACGTCTAGCGCTCTCAATAGCATGAGCGGAGGTCGTCAA
GTGTTCTTCAAGTGCGAGCTTTTCCAGAAGACTGGTTCATTCAAGGCTAG
AGGAGCATGCAATGCGGTCCTGCTGACACCACCCGAGTGCGGGGACGTGG
TGACGCACTCCAGCGGTAACCATGCACAGATGCAGGCAGCTGGTTCCCAG
GAAGGCGAACCTCTACAAGCTGTGTCGATTGCCGGAATCCGGGAGGCTGC
GGTGCGCATAGCGCCTCACGTGAATGCTACGCCAGTGCTGACGTCTAGCG
CTCTCAATAGCATGAGCGGAGGTCGTCAAGTGTTCTTCAAGTGCGAGCTT
TTCCAGAAGACTGGTTCATTCAAGGCTAGAGGAGCATGCAATGCGGTCCT
GCTGACACCACCCGAGTGCGGGGACGTGGTGACGCACTCCAGCGGTAACC
ATGCACAGGCTCTCGCGTGGGCAGCAGCAGCGAAGGGCATCAATGCCCAC
ATCGTGATGCCGAACAACTCCATCGCCGTCAAGGTTGAGGCAGTTCGCGG
CTACGGCGCGAGGGTGACTTTCTGTGAGAACACCAAAACCGGACGAGAAG
ACACCGCGGCCGCCGTTGTGTCGAGACTGCCCAACTCGGCTTTCGTTCAT
CCCTACAATGATCCCAGAGTGCAGTGCGGCCAGGGCACGGTCGGTTTGGA
GCTGATCCAGCAGGTGAAGGAGATGACAGGAGGCCAAAGCCTTGACGCAG
TTATCGTGCCAATCGGCGGCGGTGGACTGATTAGCGGCGTGTCGACAGCC
GTCAAGGCCCTCAGCCCGGGCATCCGGGTCATCGGAGCGGAGCCGAACAT
GGCGGCGGACGCGTTTAGGTCCAAGGAGAGCGGGACGCTGTGTGGGCACG
AGGGCAATTCGTTGCCTAATACCATTGCAGATGGTTTGCGGACCACTTTA
GGCAGCAAAACATGGCCTATCGTACGAGACGCCGTCGACGAAATCGTCAC
CGTTTCGGAAGAGGAGATTCGGCGATGGATGCGAATTGTCTATGAACGGA
TGAAACTCGTGATCGAGCCCAGCGCAGCTGTCGGGGTAGCCGCGCTCATG
TCGCCGCGAGTGCGGGGCATGCCAAGCGACATCAAGAGGGTAGGGGTGGT
GCTGTGCGGGGGAAACGTCGACGTGAACGCGCTGCAAGAACTCCTTGTGT
CAGGAGCTGAAGTATCGCCAGAATGAGCTCTCGCGTGGGCAGCAGCAGCG
AAGGGCATCAATGCCCACATCGTGATGCCGAACAACTCCATCGCCGTCAA
GGTTGAGGCAGTTCGCGGCTACGGCGCGAGGGTGACTTTCTGTGAGAACA
CCAAAACCGGACGAGAAGACACCGCGGCCGCCGTTGTGTCGAGACTGCCC
AACTCGGCTTTCGTTCATCCCTACAATGATCCCAGAGTGCAGTGCGGCCA
GGGCACGGTCGGTTTGGAGCTGATCCAGCAGGTGAAGGAGATGACAGGAG
GCCAAAGCCTTGACGCAGTTATCGTGCCAATCGGCGGCGGTGGACTGATT
AGCGGCGTGTCGACAGCCGTCAAGGCCCTCAGCCCGGGCATCCGGGTCAT
CGGAGCGGAGCCGAACATGGCGGCGGACGCGTTTAGGTCCAAGGAGAGCG
GGACGCTGTGTGGGCACGAGGGCAATTCGTTGCCTAATACCATTGCAGAT
GGTTTGCGGACCACTTTAGGCAGCAAAACATGGCCTATCGTACGAGACGC
CGTCGACGAAATCGTCACCGTTTCGGAAGAGGAGATTCGGCGATGGATGC
GAATTGTCTATGAACGGATGAAACTCGTGATCGAGCCCAGCGCAGCTGTC
GGGGTAGCCGCGCTCATGTCGCCGCGAGTGCGGGGCATGCCAAGCGACAT
CAAGAGGGTAGGGGTGGTGCTGTGCGGGGGAAACGTCGACGTGAACGCGC
TGCAAGAACTCCTTGTGTCAGGAGCTGAAGTATCGCCAGAATGA
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