|
|
Homology
BLAST of mRNA_F-serratus_M_contig1117.1085.1 vs. uniprot
Match: D8LJN1_ECTSI (Rhomboid domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJN1_ECTSI) HSP 1 Score: 326 bits (835), Expect = 2.010e-103 Identity = 206/435 (47.36%), Postives = 269/435 (61.84%), Query Frame = 1
Query: 214 PRISPALRGGVRGFRSGGE-------RHRNPWFIVLGLQLVQKIVNLPRKPPLTIALMAAMTALHLAPEILADILGAGSTGGGSGRFFTEVYSY-WKPSGYGNHIQESCMLPGSMLAEFQRTGALSLRRFFLSAFLHGSEMHLYYNMASFLLKGVSLELDMGTRTYFGLLVFCLVASQALLLVASWVMMVVFDEPSAMSACTVGFSGVLFALKYVLHRRSPGYTTVMGFNIHTRYAAWLELVLIHFMIPNASFLGHLCGIIAGILYVEVPGIASVLNILA-LSMFGNP-GPSYTYSSGATRVRPPSSGTRESDMRRYRNGAATGTPTGVQTTQSRDFNGD-EAEEMAVQEALRRSILDA----GPREATRVGAGSSLGQQ---RWMGQGDVTPATVESHRLTPSAPSEEDISSVESERRTGIGSAELRRRRLQRM 1464
P + RGG+R + GG + R PW ++L L+LV +I L KPPLT+ALMA M+ALHL P+I D+ G V+ + W G+ +HI+ C+LP S+L ++RTG + +RR +S F+HG +MHLYYNMASFLLKGVSLEL MGT+ + GLL F L+ASQ L+++++WV++VVFD PS M AC VGFSGVLFALKYVL RRSPG T+VMGF++HTRYA WLELVLI M+PNASFLGHLCGI+AG+LYVEVP + V+N+ +S++ N G SYTY+SG + P RE+ + AA D + D EAEE A+QEALRRS+LD+ G + R G+S R GD A E P+AP E+ + I ELRRRRL+R+
Sbjct: 6 PGLGRLPRGGMRDY--GGXXXXXXXXQRRRPWALILALRLVHQISQLQHKPPLTLALMAGMSALHLKPDIFKDLFGRKG-----------VFEWSWLTGGF-DHIRNVCLLPASILDTYERTGEVEIRRLLMSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACAVGFSGVLFALKYVLSRRSPGVTSVMGFSVHTRYATWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIVLRVVNLFTGISLYNNRRGRSYTYNSGTSGRASPEGARRETRQQSPNPPAAY------------DIDSDPEAEEAALQEALRRSLLDSTRGGGAGDNLRRDNGNSAADNPGSRSRPIGDDAVAATEFLGPAPTAPPPEENAGGYGAGGGEIAPDELRRRRLRRL 414
BLAST of mRNA_F-serratus_M_contig1117.1085.1 vs. uniprot
Match: A0A6G0XLI0_9STRA (Rhomboid domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XLI0_9STRA) HSP 1 Score: 162 bits (409), Expect = 2.930e-42 Identity = 111/292 (38.01%), Postives = 152/292 (52.05%), Query Frame = 1
Query: 247 RGFRSGGERHRNPWFIVLGLQLVQKIVNLPRKPPLTIALMAAMTALHLAPEILADILGAGSTGGGSGRFFTEVYSYWKPSGYGNHIQESCMLPGSMLAEFQRTGALSLRRFFLSAFLHGSEMHLYYNMASFLLKGVSLELDMGTRTYFGLLVFCLVASQALLLVASWVMMVVFDEPSAMSACTVGFSGVLFALKYVLHRRSPGYTTVMGFNIHTRYAAWLELVLIHFMIPNASFLGHLCGIIAGILYVEVPGIASVLNILALSMFGNPGPSYTYSSGATRVRPPSSGTRESD 1122
RG +GG + +VL +QL +I L RKPP+T+ALM M L I+ G G S R + + P ++ F +R +SAFLH E HLY NMASFL KGV+LE G+ + L+ LV S L + A++ + V + S + C+VGFS VLFALK VL++ SP YT +MG I T+YAAW ELV IH+ +P +S +GHL GI+AG +Y++ P L L L+ F + +YTY+SG T ESD
Sbjct: 12 RGRNAGGRGRNDGLLLVLLMQLYGQIQQLERKPPVTLALMGGMVGL---------IMYKGHPGVPSARRYA-------------------LCPDVIVDRFD------WKRLIVSAFLHVDEWHLYNNMASFLWKGVNLEFKYGSERFVQLIATLLVMSHVLAVAATYTLATVLHDNSYIHQCSVGFSAVLFALKMVLNQNSPAYTNIMGITIPTKYAAWAELVYIHYFVPGSSLIGHLAGILAGYIYMKSP-----LWTLNLNFFTSQPRAYTYASGRADANNSRQPTYESD 264
BLAST of mRNA_F-serratus_M_contig1117.1085.1 vs. uniprot
Match: A0A482UPC4_9ARCH (Rhomboid family intramembrane serine protease (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UPC4_9ARCH) HSP 1 Score: 157 bits (397), Expect = 4.600e-41 Identity = 91/255 (35.69%), Postives = 146/255 (57.25%), Query Frame = 1
Query: 250 GFRSGGERHRNPWFIVLGLQLVQKIVNLPRKPPLTIALMAAMTALHLAPEILADILGAGSTGGGSGRFFTEVYSYWKPSGYGNHIQESCMLPGSMLAEFQRTGALSLRRFFLSAFLHGSEMHLYYNMASFLLKGVSLELDMGTRTYFGLLVFCLVASQALLLVASWVMMVVFDEP--SAMSACTVGFSGVLFALKYVLHRRSPGYTTVMGFNIHTRYAAWLELVLIHFMIPNASFLGHLCGIIAGILYVEVPGIA 1008
G R+ H +P + L +Q++ ++ LP KPP+T+ L+A H+ P+ +F + YS +++++C+ P +++ ++ R L+ F+H +MHLYYNM S L KGV LE G+ + L+V+ L+AS LL+V S+V+ V S+ +C +GFS VLF+LKYVL++ SP YT+++GF + +++AAW ELVL + P SF+GHL GI+AG LYV + +A
Sbjct: 5 GRRNQRSPHVSPVVVSLLIQILSQLEKLPYKPPVTLGLLAMNIIAHIHPD----------------PYFLD-YSL-------TNVRQNCIWPSLIVSSLTNNHSILWNRIVLAGFMHADDMHLYYNMLSLLWKGVQLEQQFGSFQFGILVVYSLLASHILLVVMSYVVYAVTQNIHISSYDSCAIGFSAVLFSLKYVLNQNSPAYTSILGFQVPSKWAAWAELVLASLLSPQVSFIGHLAGILAGYLYVHMDSVA 235
BLAST of mRNA_F-serratus_M_contig1117.1085.1 vs. uniprot
Match: A0A836CHG7_9STRA (Rhomboid domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG7_9STRA) HSP 1 Score: 160 bits (405), Expect = 5.440e-41 Identity = 132/380 (34.74%), Postives = 186/380 (48.95%), Query Frame = 1
Query: 259 SGGERHRNPWFIVLGLQLVQKIVNLPRKPPLTIALMAAMTALHLAPEILADILGAGSTGGGSGRFFTEVYSYWKPSGYGNHIQESCMLPGSMLAEFQRTGALSLRRFFLSAFLHGSEMHLYYNMASFLLKGVSLELDMGTRTYFGLLVFCLVASQALLLVASWVMMVVFDEPSAMSACTVGFSGVLFALKYVLHRRSPGYTTVMG-FNIHTRYAAWLELVLIHFMIPNASFLGHLCGIIAGILYVE----VPGIASVLNIL--------ALSMFGNPGPSYTYSSGATRV--------------RPPSSGTRESDMRRYRNGAATGTPTGVQTTQSRDFNGDEAEEMAVQEALRRSILDAGPREATRVGAGSSLGQQRWM 1317
SG +R NP+ + L L+ + + LP KPP T L+A +HL P LA +L A G +T+V C+ P ++ E G + R F SA +HG ++HL+YNM S L+KGVSLE MGT + L+VF S L++V + + + +P ++C VGFS VLFALKYV R P T +G F I +R+A+W EL+LI ++PNASFLGHLCGI+AG+L+V V A L L A +G G YTY+ G + RPP+ + GAA + S F ++A+ +QEALRRS+ E R+G + Q W+
Sbjct: 5 SGRQRTGNPYATGVALDLLNRFLQLPYKPPFTCFLIALNACIHLYPAALAGVLPARLLFGD----YTKV----------------CLKPAKVVKELLN-GEVDAVRLFGSALIHGDDLHLWYNMGSLLMKGVSLETTMGTPAFALLVVFLWALSHTLVVVVALASVYLGFDPG-FNSCMVGFSAVLFALKYVAAFREPARPTPVGYFLIDSRWASWAELILIQVVVPNASFLGHLCGILAGVLWVHGGAVVAYTAKTLAPLGVGRGGPGAYDTYGGRGSRYTYARGTSGTAAAXXXXXXXXXXXRPPA----------FAPGAA---------SDSAAFEVEDADAQ-LQEALRRSL------EEVRLGGAAGAEDQDWV 336
BLAST of mRNA_F-serratus_M_contig1117.1085.1 vs. uniprot
Match: A0A813AIL7_9DINO (RBL14 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AIL7_9DINO) HSP 1 Score: 153 bits (387), Expect = 5.450e-40 Identity = 92/230 (40.00%), Postives = 125/230 (54.35%), Query Frame = 1
Query: 307 QLVQKIVNLPRKPPLTIALMAAMTALHLAPEILADILGAGSTGGGSGRFFTEVYSYWKPSGYGNHIQESCMLPGSMLAEFQRTGALSLRRFFLSAFLHGSEMHLYYNMASFLLKGVSLELDMGTRTYFGLLVFCLVASQALLLVASWVMMVVFDEPSAMSACTVGFSGVLFALKYVLHRRSPGYTTVMGFNIHTRYAAWLELVLIHFMIPNASFLGHLCGIIAGILYVEV 996
QL +I NLP KPPLT+ALM +H +P L ++ +Q C+ P +M+ + Q L+ S FLHG + HLYYNMAS L KGV +E MG ++ ++ F V SQAL + W+ + S+C VGFSGVLF LK +L+ SP T V G+ + T+YAAW EL+LI + P+ASF GHLCGI+AG+LY+ V
Sbjct: 5 QLAAQINNLPVKPPLTLALMGLQVLIHYSPMSLGVVV---------------------------DLQRQCLNPAAMVLKRQWFRGLA------SPFLHGDDWHLYYNMASLLWKGVQIEPHMGPLSFGIMVAFLTVVSQALYIAVGWLALTGAGYGGIWSSCAVGFSGVLFGLKAILNAHSPTETVVWGWRLPTKYAAWAELLLIQLVTPHASFTGHLCGILAGLLYLVV 201
BLAST of mRNA_F-serratus_M_contig1117.1085.1 vs. uniprot
Match: A0A7S0RI11_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RI11_9CHLO) HSP 1 Score: 155 bits (391), Expect = 7.070e-40 Identity = 107/276 (38.77%), Postives = 147/276 (53.26%), Query Frame = 1
Query: 202 PHFAPRISPALR-GGVRGFRSGG------ERHRNPWFIVLGLQLVQKIVNLPRKPPLTIALMAAMTALHLAPEILADILGAGSTGGGSGRFFTEVYSYWKPSGYGNHIQESCMLPGSMLAEFQRTGALSLRRFFLSAFLHGSEMHLYYNMASFLLKGVSLELDMGTRTYFGLLVFCLVASQALLLVASWVMMVVFDEPSAMSA--CTVGFSGVLFALKYVLHRRSPGYTTVMGFNIH--TRYAAWLELVLIHFMIPNASFLGHLCGIIAGILYVEV 996
PH R+ P GG GF GG R R+P+F +L +QL+ KI LP KPP+T+ +MA TA+H A ++ D+ + P YG C+ P S++ Q R SA LH S+ HLYYNM+S LLKGV LEL +G + + L+ + + SQ L + ++ + + ++S C G SG+LFALKY L PG++TV G I T+Y AW EL+LIH++IPN SF GHL GI AG L+V V
Sbjct: 4 PHIG-RVGPIPPLGGFGGFPMGGFHMGGQNRRRDPFFYILVVQLLHKIYELPNKPPVTLGIMALCTAVHFAKDLSPDMA-----------------ALIPPLDYG------CLSPFSVVHGGQWP------RLLWSAILHASDYHLYYNMSSLLLKGVQLELRVGPKRFGALVAWLTLLSQGLYALGAFWVGESYPRWRSLSRAECACGLSGLLFALKYALTHDQPGFSTVWGLPISLPTKYIAWAELLLIHYLIPNTSFAGHLAGICAGALHVHV 249
BLAST of mRNA_F-serratus_M_contig1117.1085.1 vs. uniprot
Match: A0A024TVC7_9STRA (Rhomboid domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TVC7_9STRA) HSP 1 Score: 154 bits (388), Expect = 2.830e-39 Identity = 104/302 (34.44%), Postives = 155/302 (51.32%), Query Frame = 1
Query: 241 GVRGFRSGGERHRNPWFIVLGLQLVQKIVNLPRKPPLTIALMAAMTALHLAPEILADILGAGSTGGGSGRFFTEVYSYWKPSGYGNH-----IQESCMLPGSMLAEFQRTGALSLRRFFLSAFLHGSEMHLYYNMASFLLKGVSLELDMGTRTYFGLLVFCLVASQALLLVASWVMMVVFDEPSAMSACTVGFSGVLFALKYVLHRRSPGYTTVMGFNIHTRYAAWLELVLIHFMIPNASFLGHLCGIIAGILYVEVPGIASVLNILALSMFGNPGPSYTYSSGATRVRPPSSGTRESDMRR 1131
G RG R+ G ++L +QL+ +I L RKPP+T+ LM M L L Y H ++ + P ++ ++ +L R +SAFLH E HLY NMASFL KGV LE +G+ + ++ LV S L +V ++++ S + C +GFS VLFALK VL++RSP Y+T++G + T+YAAW+ELV +H+ +P +SF+GH+ GI AG LY+ G+++V G P+YTY+SG PS+ + E RR
Sbjct: 15 GGRGLRNNGV------LLMLAMQLLGQIQQLERKPPVTLLLMGGMVGLFL---------------------------------YQGHPGIPTARKYALCPDIIVEKY------ALSRLIVSAFLHVDEWHLYNNMASFLWKGVQLEFHVGSERFARMIGVLLVMSHVLAVVVAYILSTFMGNSSYIHQCAIGFSAVLFALKVVLNQRSPTYSTILGISFPTKYAAWVELVYLHYFVPGSSFVGHIAGIAAGYLYLY--GLSAVPTRATTIPGGTRRPAYTYASGRATNSTPSTESDEEYARR 269
BLAST of mRNA_F-serratus_M_contig1117.1085.1 vs. uniprot
Match: F0W223_9STRA (Serine protease family S54 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W223_9STRA) HSP 1 Score: 153 bits (387), Expect = 6.110e-39 Identity = 98/254 (38.58%), Postives = 144/254 (56.69%), Query Frame = 1
Query: 232 LRGGVRGFRSGGERHRNPWFIVLGLQLVQKIVNLPRKPPLTIALMAAMTALHLAPEILADILGAGSTGGGSGRFFTEVYSYWKPSGYGNHIQESCMLPGSMLAEFQRTGALSLRRFFLSAFLHGSEMHLYYNMASFLLKGVSLELDMGTRTYFGLLVFCLVASQALLLVASWVMMVVFDEPSAMSACTVGFSGVLFALKYVLHRRSPGYTTVMGFNIHTRYAAWLELVLIHFMIPNASFLGHLCGIIAGILYVE 993
+R G R R G RN +++ L+QKI+ + RKPPLTI+L+ M+ LH R F ++ + P ES ML +++ R SAF HG ++HLY+NM SFL KG LE MG+ + LL++ L+ S L+++AS+++ + P A + C++GFS VLF LK VL+ +SP + + GF + T+YAAWLELVLIH ++P+ASFLGHLCGI+AG ++
Sbjct: 1 MRPGSRS-RHGQRDKRN---LLVLYMLIQKIMQMDRKPPLTISLIVLMSNLHF-------------------RIF-DIGATLSP--------ESYMLCPNLIVRRHEW-----ERLIGSAFFHGDDIHLYHNMVSFLWKGYQLESKMGSYHFACLLIYLLLVSHGLIVLASYLIFKLQHNPHAWTQCSLGFSAVLFGLKVVLNSKSPNTSNIYGFQVPTKYAAWLELVLIHVLVPDASFLGHLCGIVAGYSWIS 217
BLAST of mRNA_F-serratus_M_contig1117.1085.1 vs. uniprot
Match: W2QA40_PHYPN (Rhomboid domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=W2QA40_PHYPN) HSP 1 Score: 153 bits (386), Expect = 1.430e-38 Identity = 99/262 (37.79%), Postives = 139/262 (53.05%), Query Frame = 1
Query: 247 RGFRSGGERHRNPWFIVLGLQLVQKIVNLPRKPPLTIALMAAMTALHL----APEILADILGAGSTGGGSGRFFTEVYSYWKPSGYGNHIQESCMLPGSMLAEFQRTGALSLRRFFLSAFLHGSEMHLYYNMASFLLKGVSLELDMGTRTYFGLLVFCLVASQALLLVASWVMMVVFDEPSAMSACTVGFSGVLFALKYVLHRRSPGYTTVMGFNIHTRYAAWLELVLIHFMIPNASFLGHLCGIIAGILYVEVPGIASVLN 1020
R R G RN I L L L+Q+I L RKPP+T+ LMA M LH PEI A YS + P ++ G L R +S +H + HLY+NM SFL KG +LE MG+ + + LV L+++ + V+ F P + C+VGFSGVLFALK +L+ SP +++V GF + T+YAAWLELV+IHF++P +SF+GH+CGI+AG +YV + S+L+
Sbjct: 8 RRARMGPNAGRNGQGIALMLMLMQQIQQLERKPPVTLGLMALMYGLHFQKQQTPEIFAP------------------YS---------------LCPDRVI------GHWDLTRIVVSGLIHVDDWHLYHNMISFLWKGYNLEYKMGSVRFLLTVGCLLVLCHVLVVIVAVVLATGFQMPGPLYQCSVGFSGVLFALKVLLNHNSPTFSSVYGFRVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIYVYSSAMQSILS 230
BLAST of mRNA_F-serratus_M_contig1117.1085.1 vs. uniprot
Match: A0A225X2V2_9STRA (Serine protease n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X2V2_9STRA) HSP 1 Score: 153 bits (386), Expect = 1.870e-38 Identity = 91/247 (36.84%), Postives = 137/247 (55.47%), Query Frame = 1
Query: 292 IVLGLQLVQKIVNLPRKPPLTIALMAAMTALHL----APEILADILGAGSTGGGSGRFFTEVYSYWKPSGYGNHIQESCMLPGSMLAEFQRTGALSLRRFFLSAFLHGSEMHLYYNMASFLLKGVSLELDMGTRTYFGLLVFCLVASQALLLVASWVMMVVFDEPSAMSACTVGFSGVLFALKYVLHRRSPGYTTVMGFNIHTRYAAWLELVLIHFMIPNASFLGHLCGIIAGILYVEVPGIASVLN 1020
+ L L LV++I L RKPP+T+ LMA M +H PE+ A YS + P +L+ + T R SA +HG + HLY+NM SFL KG +LE +G+ + + + L+ L++V + V+ F P + C+VGFSGVLFALK +L+ SP Y++V GF + T+YAAWLELV+IHF++P +SF+GH+CGI+AG ++V P + + ++
Sbjct: 21 VALMLMLVRQIQQLERKPPVTLGLMALMYGIHFQKTQTPELFAP------------------YS---------------LCPDRVLSHWDWT------RIVASALIHGDDWHLYHNMVSFLWKGYNLEYKLGSVRFLLTVGYLLLLCHVLVVVVALVLATRFQMPGPLHQCSVGFSGVLFALKVLLNHNSPAYSSVYGFQVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIFVFSPAMQTAMS 228
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 333.2 |
| Seed ortholog evalue | 1.8e-88 |
| Seed eggNOG ortholog | 2880.D8LJN1 |
| Preferred name | RHBDD1 |
| KEGG ko | ko:K09651 |
| Hectar predicted targeting category | mitochondrion |
| GOs | GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006508,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006986,GO:0007276,GO:0007283,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009056,GO:0009057,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010498,GO:0010604,GO:0010628,GO:0010941,GO:0010954,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019222,GO:0019538,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0030162,GO:0030163,GO:0030176,GO:0030970,GO:0031224,GO:0031227,GO:0031293,GO:0031323,GO:0031325,GO:0031984,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032527,GO:0032879,GO:0033036,GO:0033554,GO:0033619,GO:0034613,GO:0034620,GO:0034644,GO:0034976,GO:0035966,GO:0035967,GO:0036211,GO:0036503,GO:0042175,GO:0042176,GO:0042221,GO:0042886,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044322,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045184,GO:0045732,GO:0045862,GO:0046907,GO:0048232,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0060255,GO:0060548,GO:0065007,GO:0070011,GO:0070613,GO:0070727,GO:0070887,GO:0071214,GO:0071310,GO:0071478,GO:0071482,GO:0071702,GO:0071704,GO:0071705,GO:0080090,GO:0098827,GO:0104004,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1903317,GO:1903319,GO:1903513,GO:1904211 |
| EggNOG free text desc. | serine-type endopeptidase activity |
| EggNOG OGs | KOG2632@1,KOG2632@2759 |
| Ec32 ortholog description | Peptidase S54, rhomboid domain |
| Ec32 ortholog | Ec-17_002690.1 |
| COG Functional cat. | P |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000,ko01002 |
| Exons | 3 |
| Model size | 1598 |
| Cds size | 1284 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929003.7136185-UTR-F-serratus_M_contig1117:188037..188232 | 1622929003.7136185-UTR-F-serratus_M_contig1117:188037..188232 | Fucus serratus male | UTR | F-serratus_M_contig1117 188038..188232 + |
| 1690962664.7798653-UTR-F-serratus_M_contig1117:188037..188232 | 1690962664.7798653-UTR-F-serratus_M_contig1117:188037..188232 | Fucus serratus male | UTR | F-serratus_M_contig1117 188038..188232 + |
| 1622929003.7687182-UTR-F-serratus_M_contig1117:198691..198810 | 1622929003.7687182-UTR-F-serratus_M_contig1117:198691..198810 | Fucus serratus male | UTR | F-serratus_M_contig1117 198692..198810 + |
| 1690962664.8169327-UTR-F-serratus_M_contig1117:198691..198810 | 1690962664.8169327-UTR-F-serratus_M_contig1117:198691..198810 | Fucus serratus male | UTR | F-serratus_M_contig1117 198692..198810 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929003.7244518-CDS-F-serratus_M_contig1117:188232..188588 | 1622929003.7244518-CDS-F-serratus_M_contig1117:188232..188588 | Fucus serratus male | CDS | F-serratus_M_contig1117 188233..188588 + |
| 1690962664.7936788-CDS-F-serratus_M_contig1117:188232..188588 | 1690962664.7936788-CDS-F-serratus_M_contig1117:188232..188588 | Fucus serratus male | CDS | F-serratus_M_contig1117 188233..188588 + |
| 1622929003.739207-CDS-F-serratus_M_contig1117:197355..197668 | 1622929003.739207-CDS-F-serratus_M_contig1117:197355..197668 | Fucus serratus male | CDS | F-serratus_M_contig1117 197356..197668 + |
| 1690962664.8016937-CDS-F-serratus_M_contig1117:197355..197668 | 1690962664.8016937-CDS-F-serratus_M_contig1117:197355..197668 | Fucus serratus male | CDS | F-serratus_M_contig1117 197356..197668 + |
| 1622929003.7537992-CDS-F-serratus_M_contig1117:198076..198691 | 1622929003.7537992-CDS-F-serratus_M_contig1117:198076..198691 | Fucus serratus male | CDS | F-serratus_M_contig1117 198077..198691 + |
| 1690962664.8093727-CDS-F-serratus_M_contig1117:198076..198691 | 1690962664.8093727-CDS-F-serratus_M_contig1117:198076..198691 | Fucus serratus male | CDS | F-serratus_M_contig1117 198077..198691 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1117.1085.1 >prot_F-serratus_M_contig1117.1085.1 ID=prot_F-serratus_M_contig1117.1085.1|Name=mRNA_F-serratus_M_contig1117.1085.1|organism=Fucus serratus male|type=polypeptide|length=428bp
MFPHFAPRISPALRGGVRGFRSGGERHRNPWFIVLGLQLVQKIVNLPRKP
PLTIALMAAMTALHLAPEILADILGAGSTGGGSGRFFTEVYSYWKPSGYG
NHIQESCMLPGSMLAEFQRTGALSLRRFFLSAFLHGSEMHLYYNMASFLL
KGVSLELDMGTRTYFGLLVFCLVASQALLLVASWVMMVVFDEPSAMSACT
VGFSGVLFALKYVLHRRSPGYTTVMGFNIHTRYAAWLELVLIHFMIPNAS
FLGHLCGIIAGILYVEVPGIASVLNILALSMFGNPGPSYTYSSGATRVRP
PSSGTRESDMRRYRNGAATGTPTGVQTTQSRDFNGDEAEEMAVQEALRRS
ILDAGPREATRVGAGSSLGQQRWMGQGDVTPATVESHRLTPSAPSEEDIS
SVESERRTGIGSAELRRRRLQRMSVDL* back to topmRNA from alignment at F-serratus_M_contig1117:188038..198810+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig1117.1085.1 ID=mRNA_F-serratus_M_contig1117.1085.1|Name=mRNA_F-serratus_M_contig1117.1085.1|organism=Fucus serratus male|type=mRNA|length=10773bp|location=Sequence derived from alignment at F-serratus_M_contig1117:188038..198810+ (Fucus serratus male)
CTTCTCAGTAGGATAACTCTCTACTTCGGCAGCCGAATTCTTTGGAACGT
CAAATCCTTCGCCTGCGCAGCGGAGGAAAGCAGTACAGTAGTTATTGTAC
ACGAATAACATTGGAAAAGTGAAGTACTCTCTGCAGCAGGTTTCCAGAAG
TTCTCGCCAAACACGAAACACTCCAACGTGTCAAACGTCCTCGCGATGTT
CCCGCACTTCGCGCCACGGATAAGCCCAGCGTTGAGAGGAGGGGTGCGGG
GCTTTAGATCGGGTGGGGAGCGCCATCGCAACCCATGGTTTATCGTTCTG
GGCCTCCAGCTGGTGCAGAAAATCGTCAATCTTCCAAGGAAGCCACCCCT
TACGATAGCCCTAATGGCAGCAATGACCGCTCTTCATCTGGCGCCTGAAA
TCTTGGCTGATATTCTCGGGGCTGGGTCAACCGGTGGTGGATCTGGTCGG
TTTTTCACCGAGGTTTATAGTTACTGGAAGCCAAGCGGGTACGGAAATCA
CATTCAGGAGTCATGTATGCTGCCTGGCAGCATGCTGGCGGAGTTCCAGA
GGTGGGTTAACTTACAACTTGTTCGTACAGGTTTATTAGGGTACGGAAGG
TCATATTTGCAAATTCGGATTAACACCTAGGACTAATCATAGGGTCTTGT
GGAGGGATGTAGTTACACCGCATTGTTAGAGATAGGGTGGAGGTTGAAGC
CACTCTCGTCACTCCTCTCTTCTCCCTTTCCCTTTGAGCGTCCTGTGTAA
TAAAATTATTAAAGAAGACTCAGAGCTACACTGCGGAAGGCAGTGAACTC
CTCGAAACCTAGAAACACGAATACACTAGTGCGTCCTTCAGTAAGGAGTT
TCTTCGGTTTTCATAATGAGTCAGTACAGTGCTTCGCCAAGACTAGACGC
TTTAGAGTCAAGAGTCACAGAAATTCAGGAGAGAATGGGTGAGCTGGTCG
GCATGATGAGGCAGCTTACTACGGAGACCAGAACAGCAGGTGAAGGTCGA
CGTGGAGAGGAGTCAGGCGGCGCCAGAAGGAGGCCGCCCACATCTACAGC
AGTGGAGGTATCGGCAGGGTACCTCTCACTGCTGCGACGGGAGACGCTGC
AGCAGTTGGAGCTGCGGCGATCAGGAATTTTTCCGTCCAACACAGGGCTG
CATCAGAACCAGCCGACACGAGACCAGGGCTTCCAGCTGGAGTGGGCCCG
ATGATCGACGACCGGGGCGGTGAAGCTAGAGATGAATATCTCGCAGGTAT
AACCGCGTATGACCAGGGTAGAGACGCCCTTCGCGCCGAATTTAGAAGCC
TGCCCGCTAGAGTCGTTCCGCCCGTTCTCAAAGGGGAAAAGGGCGGATTT
CTAAAATTCAAGCACGACTTCTTTCTCAAAACCAACATGCTGGACATTAC
CGATCACTTCGTAGCAGGGGGTACTAGAGCCGTACCGGTAGGGGACCCTC
TTAAACAAAAGGCTGTGCTGCTGAATGAAGGTTTCTCGAGTGAGGAAATT
AAGGGTGCATACCAAGCATGGAACTTCATAGACGCTGCTCTACAGAGTGA
TTCAGACCGATCCATACTCAAAAGATGCAAATCACCGCGAGAAGTGTTTG
AGCGCCTTGAAAAATGGCATGACCCTGACAGCGAAGTGGCAACGCAACGA
CTGTACGACAAGTTTCACGAGTTCGCGATCCCACCTCACACTGATCCCAT
CGCCGCACTCCATGACTTGGAGGATATCAATAACCAGATGCATGAAAAGG
GAATCGGTCGGATCCCTGATGCAGTGCTGCATGCACGCTTCGTCCGCGCG
CTGCCCGATGAGTATTCCCTCGTCAAAGAGACACTACAGGCTATGAAAAA
TCGAGATCGCGACGAGATCATCCGCATGGTCAGCACCAGGCACTCAAACC
TGCCCCAGAGGAGGGGAGCACAGCGAACATCCCGACAGCCCGAGCAAGCA
TTCGTCTCCGGCGAAAGCGGCAACCGCAGCGGTGCGCGACGAGGTCGCGA
CCGCAGGGGCGGGGGAGACCAGGCCGTGGCCGAGGTGGAAGCAGCGGCGT
CGGAGGAGGAAGCAACAACAGCTCTGGAACGCCCGGCGGTGGGGCAAGTA
GTAGTTCAGCTGGAACCCAGGGAGCAGCGATGGCAGCGGTAACCCGGGCA
GCGGCGGCGACGGCCGCCACAACATCCCCTCTGGCCGCTGTTTCCGCTGC
AGACAGAGAGGCCACAGGAGGCAAGACTGCACGACGAGGGAGAGCGACTT
CGTACCAAGATGTAACAGATGCACAGGTTACGGTCATGAGGAGAGTTCCT
GTTCCTCGGACGCGGCGGTACTTGTAGTGGAGCTGCCGGCACCCGAAGAC
GACCTCGCCGTGGAAGCCCAGGCGTTCGCGGTTTCGGAGGCAGGCAAGTG
CAATGTGACGATTGGTGATGCAGTAGGGGGTGGCGTTGGACAAGCAGGTC
GTGCATTATATCGCGGATAGCGCGGCGACATGTAACATGACGCCTAATGC
TGATGGTCTCACATGTTATCGAGAGTGCAGTAGACCCCTCGGCCTTGCAA
ACGGGGAAGAAATTACTATCGTAGGGTATGGCGACCTTACGGTAGATTTC
CGCACCAACCACGGATGGGTACGCGTTGAAATGAACGACGTAGCCCATGT
TCCCCAGCTGAGCTATAACCTCATCTCCCTACCGTCAATGGCACAAAAAG
GCCATACATACACGGGCGATAAAGATGGAGTAACTCTCGAGTTAAAAGGG
GAAAAACCGTATTTTTCCCCCTGGTTGGTAAGCTTTGCCGCCAGTACGGG
CGCCGCCCGAAGGCGGCAAATAACATGGTAGACACTGCTTGTGCCGTAAT
CGCGCCGGGGAATGCGAAAGCTCCCAACCCCCCACTGACATCAACATCCT
CCACTGCACGTTCGGCCACGCCCACGAGAGATTGCTCAAGAAAACGGCGA
CGCAGCAAGGAATCGCCTACAGCGGGGAATTCCACGAGTGCCGAGGATGT
TCGATGGCGAAGGGGCTGCGGAAGCCCATCGCGAGGTCGACGCACACCAG
AGCAGATAAGAAACTAAAGAGAGTTTTCGTCGACCTAAGTGGGCCCATGA
CTGTAAAAAGTATGGGGGGGAAACGGTACACACTTATCGTGCGGGATGAC
TGCACGCGGTTCAATCGAGTCTATTTTTTAAGACATAAGTCGGACGCGGC
CAGCGCGTTCGAATCATTCCTAGCGGAGGTGCGAGCAGACGGCATACCGT
CCACCGTCATGGCTGTTCGATCTGACAACGGGAGGGAGTTTTTCGGAGGA
GCGTTCGGGGAACTTTGCCGTAAGCGTTGTATCAAACAAGAGTTCACACC
CGCAGACAGCCCTAAGTACAATGGTATAGCCGAACGGGCGCTAGGACTGA
TTAATGATGCCGCCGCCGCAGCCCGCATCCAAGCAACAGAACTGTACCCT
GGAGCCCCCGACTACCCATCGTTGTGGGCCGAAGCGGCATCGTGGGCGTG
CCACGCTCTAAACTGCACCGCGACCACAGCAAACCCAGGAGATAAATCAC
CGTACGAAATGTGGCATGGTTCGCCTCCCCCCGTGGAGCGGTGTGGCCGT
TCCTCAAACCAGCCGTCTGCCGCGTAAAGCGAAACAACAAGTCACTGCCG
AAAGCCCAGGATTGCTACTATGTAGGGCCTGGCATTGGCCACCCGCGCGA
CTGCATACGAGTCCTCACCGCCAACAGATCTATACTGACCACCCGCAACG
TCACTTGGCGACACGTACCCCTTTCCCGCCCCGCGCCCCCGCAGCAACTG
CCCCCTATTGTCGAAGAGGGGGGGTCTACAGCGGGGGAGGGCGCGAGCGG
GGAGAGAGCGCCGAGTCAAGGCGGAGGGGGCGGAAGCGGTGTTGGACAAC
GAGTCCGACCTTGACGACACGGCGGTGGGGCCCACGCTAACCGCAACGCG
GGAGGCGGAAACTGGAGCCGGGGGGGTAGCGGAAGGCGACCCCACGGTAC
CATCGGGCTCCCCCAGCAGCAGAGTCTCCAGCAGAAGCAGCAGAGTCTCC
AGCAGCAGCAGCAGAGACAGCAGCAGCAGCAGAGACAGCAGCGGCAGAGA
CAGCAGCAGCAGAACCAGCAGCAGCACCAGCAGAGGGGACGCCCCCACAC
TCGCGGGGAGAGAGGCGCACCGACAGAAGTGGGACGGGAAGATACCCGCA
CTTCAAGGCGGACGCACGCGGTCCCAGTCGAGGCAGCATCAAATGGATGC
GGACACCGCGGATGCCCTGCTGACGCATGCTTGGAGGACGGAGGAAGAGG
AAAATGCCACCGAACGAGTCCACGATCTGCTGTTGGAAGAACGCCTCGAG
GAGGAACTCGAGGGACGCGGTCAGATGGGGAGTGGCCCGAAGAAGGTGGG
CCGGCGCTGGAGCGGCGCGAGAAGGAGCAGGAACTGGACTGCCCTCTCGC
AATGGCAGCCGAACAGGACCCTAAGATGAGTACCCCGACCCCCATAGGGA
AACAACCCAGCGAGGTAGAATCGCCCCACTCTCCGTAGCAGGAGTAGAAC
GGTCAATGTACCGGGCGGGCTGGGAAGAGGCCATGAGACTAGAGTTCGAC
GGCCATATGCAGACAGGCACTTTTCTCATGGTAGACAGGGTACCCGAGGA
ACGAAAACCAGTAAGCTCAAAGTGGTGCTTCAATTACAAAACGGACAAAG
AGGGAAAGATTACGAAACTCAAAGCAAGGTTAGTTGCTAGGGGCTTCACA
CAGATCCGTGACGTAGACTACACACACTCGTCCTCCCCCTGCCCGTCGTC
AGCATCCGTGAAGCTGATATTGGCGGTAGCCAATGAGAAACGCCTTCCAC
TCCGCCATTTTGACGTAGCCCAGGCGTACATTCGCGCCTCCCTAGATGAG
GAAGTGTATATGAAACTTCCTGGTGGTTGCGGGGAAAAATCTCATAAGAC
TACCAAGTTGGAGAGGGCCATTTACGGCCTGAAGCAGAGCGGACGAAAGT
GGGGCCACCTGTGCGCGGACACTCTGATAGAGCATGGCTTCGAGCAATGC
AAAGCTGACCCGTGTGTTTTCCGAAAAGTCGTCGACGAGGCCGTAGCCAT
GATCGTCGGTGTCTACGTGGATGACCTGTTGATAGGGGGTTCAGAGGAGG
ACTGCGAGTCACTGTTGGCATCCCTGAACAGAAGGTTCCCAACAAACGAT
TTAGGAGAGTGTACATGGTACGATGGATGCGGCATCGAGAGAAATGTCGA
GCTAGGTACAATCAAGTTGTCACAGGAGGCATACGTCGAGAGCTTGATGA
AACGATTTGACGTACAATCCACCTCCGACATCCCCGCTTCCCCCGGCGCC
GACCTAGGACCAAAGAAAGCTGATGAGGCGGGAGGGGATTGGCCTGTGAG
AGAAGCCATCGGAAGCCTGATGTGGCTATCGACGATGACTCGGCCGGATA
TCACCAACGCCGTGAGAGCTGTAGCGCGTTATGCTCATGCGCCAACCGAA
AGACTTTGGCAGGCGATAATGAAGATATTGTCGTACATCAACGGAACTAG
AAGTCTAGGCATTACTTACGTGCGGGGTTCGGGCCTGAGTCTTAACGTCT
TCGCCGACGCAGACTATGCGAGTAAAGAGAACGATAGACGTTCGGTCTCG
GGTATTGCAGTGACTATAGGAGGTACTGTCGTAAGCCACGCGAGCAAAAC
ACAACGTGTTGTTTCGCTATCGACCTCAGAGGCTGAATACATTGCAGCTG
GGGAAGGGGTCAAGGAAGCCTTGTTCGTGCGCGCCGTTTTGTCATTTATT
GCGCCTGAGACGAGTGGAGCGAGCATAAAAGTCCTTGAGGACAATCAGGG
GGCGAAAGCACTGATCGAAAACCCTCTGAGCTCTGCCCGAAGCAAGCACA
TAGACGTGCGTTACCACTTCATTCGCGATCTTTTTAGGACCAGAAAAATT
TCTGTGGAGTACGTAGCTTCGGCCGAGCAGCACGCCGATATGCTCACCAA
GGCCCTCAGTAGGGCAAATCTCATGTACCACCGCAAGCATTTAATGAACC
TTGCGGAGTGAGGTACTGTAGCGCTGGGCTAGAGAGTTGAAGCAGCCGAG
TGTACTAACACGTCACCCGAGGCAGGTAGGCCTAGGACTTGCTAGTGACG
GGAGTTGTCCCGTGCACCACGATGCGATCCTCTGATGGCAAGTAAGCTTA
GGGTGTGTAACTCGCGTGGATGACACTAGACTCGCTTCGATCCCCTTGCT
TTGGAAGCGCGACCGTTGGAATCCTGTGTGATAGCAGCGGTTATTTCGTT
TTTGGACGCGTGGGGTTTTTGATCGGCAGGGCCGGTTTTCCCCACGCACC
GTTTCTGCGACTTTAGGTATGACCTTGGGGTAACTATATCCCCTACTTGA
TGGTTAGACACTCGCGTGGATAACCGAGGAGGGTGTTCGTACAGGTTTAT
TAGGGTACGGAAGGTCATATTTGCAAATTCGGATTAACACCTAGGACTAA
TCATAGGGTCTTGTGGAGGGATGTAGTTACACCGCATTGTTAGAGATAGG
GTGGAGGTTGAAGCCACTCTCGTCACTCCTCTCTTCTCCCTTTCCCTTTG
AGCGTCCTGTGTAATAAAATTATTAAAGAAGACTCAGAGCTACACTGCGG
AAGGCAGTGAACTCCTCGAAACCTAGAAACACGAATACAACTACTCTGTA
TACCATAACGTATACGTTTACTTGGTAGGGCATCCCGAATATCTCCGCAC
ATCTTCGCGCACAGTGCAAGAAGTTTTTATTTTTTTCCCCTACCGGGGGC
GGATCAGAAGGTCTAGGTGCATTCATATTTTTCTTTAAACTACAAGACAG
AGTAGTTGAAAACAAAACAAAAAACGAAAGTACCAATATAGTCTATAATT
TGTACTGTACATAACAGTAATTATTCTTAAAAGATAATGGTAGAGAGTAT
TCAAAAACCCACAGATATTGACGTCGATTCGTTTCGTCGAGAAAAGCCGC
CCCGGGGGTGCCACATGTACTGTATCTATGCAGATCTAATTTTTTTTATT
TTGAAAAAAATGATGAGATAGATTTTTGTAGATCGACACGGTACTTTCAG
TATGCCCACTTCATACCGATAGTGGGTGTGGGAAAGAGAGGCGTATATCA
ATTGGTCCATGGTGACCTGCTAAGGCAGCACTCGTTCGGAACTACCTTGA
GGTTTACGGGCCCTGTGCCGGCGGACTCTCGGCAGTGAACGCCATCGGTA
CGCAATTGCGTGACCCGATAAAATTGGGACTGGCCCGATGGCGTATGGCA
GTTTAATATAAATATATGGATGCCGCCGCGGAACTCGGGAGAAATCCCGG
AAATAAGCACCAGATTCAGCCTGAGTACGGAGATGAGCAGGCTGACGCGG
GACGGGACTGCCGAAACCGTCTCGCGAGACCAAATTCTCAGGCACGAGCG
CGGACAGGGGAGTATTATTTTGGGTATGGCTATTTGCACCACCGGTGGGC
TATTCTCTTGTTTACCCCCCCACCTGGATCTCGCGTCAGGAGACTTGGTT
GGTCACAGTACATGCATGGGTGTGTTAGGATTAGGGTTAGCTATCATGGG
GTCTATCGTGCAGCCCAAACGGCCCTGTCTACGTGCTACCACGGCCGGTG
GGGTGGTTGTTGTTTTCTGGTATGAATGGCTATTTGCCCTTACATACCAG
AAAACACAAACCACCCCACCGGCCGTAACAGCACGTAGACAGGACCGTTT
GGGCTGCACGGTAGACCCCATGATAGCCCTGCAACGCGCCAACACACTCA
TGCATGTACTGTGACCAACCGTGTCTTCTGACGCGAGATCCAGGTGGTGG
GGTAAATTTGGGAATGGCCCACCGGTGGGGCAAATCGCCATTTCCTATTA
TTTATTATTTTCCCTGTTCAGGTGACCACGAGCAGGATTAGCAACCTTAC
CAGGTTGATCCATACTCTTGCTATATGTGTGACCATACATATATACTCCG
CACAGAGTACTCTTTCATCCTGGGTATATAGAGAACGAGCGGACCGAGTA
CGGGACGACCGAAGCGAACCTATCTCGCGAGAGCAACTTATCAGGCGCGA
ACGGGTTCAGGGAAACAACAAATTCCCTTGTTTAGCACCGAGGAGAATTA
GCAGCCATACCCTGATGGACAGAGTCTGCTAAATATGATTACGTTACTCG
TACGGTACTTAGTAAAGCACAAAAACATGCGCACCTTTCTGTAGGCAGGT
AAGCCTATAGCTCTGTTCGTGTTGTTCGTATTGTTGTGGTTGTTGATTCA
CACATTAGCGGATTGTCCTCAACTGAAGAAACTAGACACAACGAGAGTCA
CCCACAGACCTATCAAATGCCAATCCTGCTCGTGGTCACGAAGAGGTACG
AAGGTCAACGGGTCACATCATGGTGACAGCTCGCCCGTAACTCAAACCAA
CAGGAATCCAAATCGCGACAAAATCATTGCCAGGCCCAACCACCCGAGAA
CATCGGAAACTTATCGGCGTCAAGACGATGTCTTTGGGTATATAAAAAAA
GTGGGGATGGAGCAGTCGTCCTGCCTAGGTTTCTGCATAGAATCTTTGGG
AATGTGACCGCATAAAGCGTGTAGGGAACCAGTCCTACTATAAATACAGT
ATTCGACACATCCGCCTCGGACGGTGTGGATGCCGGAAAAGTTTGGATGC
GTTCAAAATTTTCGACTGACTACTCTCCACCTGTACGGTTGTTATGGGTC
ATAACTTTCAGCAGACTAATAGGCATCAACCGGTACAGTATGGTTCCTGA
TCCTGACTGTGGTGATCTGAAGAGGGAAAAAAAAAAGTGTTTTTCCTTTT
CCCGTCTGCGTCTGAGGATTTCGGTCTCACGAGACAGGAGGTTCGGCCGC
CCCGTACCGCTTCAGCCCCTCATTATTCCATGCCCAGACAGAATGTTTTT
CGCCGTCCGTTGCGCGCAATGCCAGCTGCGTGATCTGTGGGGCTTCGATG
AGGTTCATGCAAGGAACAGAGCATGCGCAAGTTGCAGTAAAATCGCCTTC
TTGCTGTAGACACCAAAGGGTCTCTATCCATATGTAGTATGTATGGTTAC
TGATACCGTATATATTTTGCGAATATGGAAGTTGAAAACCTATAAAGGCG
ATCGACTCTTGCGAGACGAAAGCGGAAGGAGTATCGCCCTCCTAGATTGA
TGCATTCGGAGCATGTCTCTGATGACGATGTAACCTATGACAATCGCGAA
TCGTCGCACACAATTTCACCAACTCGCTCGCGCTCTCCTCACGATGTCGC
TCAAACGGAACTTTCCAGGACGGGGGCGCTAAGTCTCCGAAGATTTTTCT
TGTCCGCCTTCCTCCACGGAAGCGAAATGCACCTCTACTACAACATGGCG
TCGTTTCTCCTCAAGGGAGTGTCGCTGGAACTGGATATGGGGACGCGGAC
GTACTTTGGACTACTGGTTTTCTGCCTTGTCGCCTCTCAGGCGTTACTTC
TCGTGGCCTCATGGGTCATGATGGTGGTGTTTGATGAGCCCTCGGCCATG
AGCGCGTGCACTGTAGGATTCTCCGGGGTGCTGTTCGCGCTCAAGTACGT
CCTCCACCGGCGATCGCCCGGATACACGACGGTGAGCACGAACCGTACTT
CCACTTTAGTGCCCGGTTTGTGATTCGAAAGTCTAACTCCCTTCTCGAGT
AGAAAACTTCACTCTCTATTCTTTTGAGGAAACGAACTGCGCACGGTTGT
CCTGAATCCACACAATCGCAATCGTGATATGTACTCCCACCAATATCCAT
ATTTTCAATGGGTGCGCCCCAAAGCTTTCTTTGCTCCATGCAGAGATACA
CGCGTGTAGGTGTTTTAACAACGTCCAAATCGCCCGTTTGTGTTCTTACT
GTCATCTGCGCTCGGAAACACGCATCGTAGCTCGCGAATGCTGGTGCCGC
CGCTGACCCTTTATACCCATGAACTATTTCGTATCCGTCAGCCCTGCCCT
ATCGTATTCGGGTATCACACCCGTATGTGCCTGTCACAGGTAATGGGATT
CAACATTCACACGCGATACGCCGCTTGGTTGGAGCTGGTGCTCATCCACT
TTATGATTCCCAATGCTTCATTTCTGGGTCACCTGTGTGGGATAATCGCT
GGGATCTTGTACGTCGAGGTGCCGGGCATAGCAAGTGTCTTGAATATCCT
CGCGCTCTCTATGTTTGGCAACCCCGGACCCTCCTATACCTACAGTAGCG
GGGCGACCAGGGTACGCCCCCCTTCCTCTGGGACACGTGAAAGCGACATG
AGGCGTTACCGTAACGGGGCTGCTACGGGGACTCCAACAGGAGTACAAAC
CACTCAATCCCGGGATTTCAATGGCGATGAAGCCGAAGAGATGGCAGTCC
AGGAGGCGCTACGACGTTCCATTCTCGACGCGGGACCCCGCGAAGCAACT
CGGGTTGGCGCGGGGTCATCGCTTGGGCAGCAGAGGTGGATGGGACAGGG
AGACGTCACACCGGCCACCGTCGAATCACATAGGTTGACGCCTTCAGCGC
CTTCAGAAGAGGATATATCGAGCGTGGAATCGGAGAGGCGGACCGGCATT
GGCTCCGCAGAGCTTCGCAGACGCCGACTGCAGCGAATGAGCGTAGACTT
GTGATTTCTCAAAGCTTGGGTAGGTATTGTTTATTTGATCAAGGTACCCA
GTAGAATCATTGTGGTTCACATGTTTAGAGTTCTTGTCTTGTTTGCGTAT
CCTTGTCCAGCGTTGTATCAGTA back to topCoding sequence (CDS) from alignment at F-serratus_M_contig1117:188038..198810+ >mRNA_F-serratus_M_contig1117.1085.1 ID=mRNA_F-serratus_M_contig1117.1085.1|Name=mRNA_F-serratus_M_contig1117.1085.1|organism=Fucus serratus male|type=CDS|length=2568bp|location=Sequence derived from alignment at F-serratus_M_contig1117:188038..198810+ (Fucus serratus male)
ATGTTCCCGCACTTCGCGCCACGGATAAGCCCAGCGTTGAGAGGAGGGGT
GCGGGGCTTTAGATCGGGTGGGGAGCGCCATCGCAACCCATGGTTTATCG
TTCTGGGCCTCCAGCTGGTGCAGAAAATCGTCAATCTTCCAAGGAAGCCA
CCCCTTACGATAGCCCTAATGGCAGCAATGACCGCTCTTCATCTGGCGCC
TGAAATCTTGGCTGATATTCTCGGGGCTGGGTCAACCGGTGGTGGATCTG
GTCGGTTTTTCACCGAGGTTTATAGTTACTGGAAGCCAAGCGGGTACGGA
AATCACATTCAGGAGTCATGTATGCTGCCTGGCAGCATGCTGGCGGAGTT
CCAGAGATGTTCCCGCACTTCGCGCCACGGATAAGCCCAGCGTTGAGAGG
AGGGGTGCGGGGCTTTAGATCGGGTGGGGAGCGCCATCGCAACCCATGGT
TTATCGTTCTGGGCCTCCAGCTGGTGCAGAAAATCGTCAATCTTCCAAGG
AAGCCACCCCTTACGATAGCCCTAATGGCAGCAATGACCGCTCTTCATCT
GGCGCCTGAAATCTTGGCTGATATTCTCGGGGCTGGGTCAACCGGTGGTG
GATCTGGTCGGTTTTTCACCGAGGTTTATAGTTACTGGAAGCCAAGCGGG
TACGGAAATCACATTCAGGAGTCATGTATGCTGCCTGGCAGCATGCTGGC
GGAGTTCCAGAGGACGGGGGCGCTAAGTCTCCGAAGATTTTTCTTGTCCG
CCTTCCTCCACGGAAGCGAAATGCACCTCTACTACAACATGGCGTCGTTT
CTCCTCAAGGGAGTGTCGCTGGAACTGGATATGGGGACGCGGACGTACTT
TGGACTACTGGTTTTCTGCCTTGTCGCCTCTCAGGCGTTACTTCTCGTGG
CCTCATGGGTCATGATGGTGGTGTTTGATGAGCCCTCGGCCATGAGCGCG
TGCACTGTAGGATTCTCCGGGGTGCTGTTCGCGCTCAAGTACGTCCTCCA
CCGGCGATCGCCCGGATACACGACGGACGGGGGCGCTAAGTCTCCGAAGA
TTTTTCTTGTCCGCCTTCCTCCACGGAAGCGAAATGCACCTCTACTACAA
CATGGCGTCGTTTCTCCTCAAGGGAGTGTCGCTGGAACTGGATATGGGGA
CGCGGACGTACTTTGGACTACTGGTTTTCTGCCTTGTCGCCTCTCAGGCG
TTACTTCTCGTGGCCTCATGGGTCATGATGGTGGTGTTTGATGAGCCCTC
GGCCATGAGCGCGTGCACTGTAGGATTCTCCGGGGTGCTGTTCGCGCTCA
AGTACGTCCTCCACCGGCGATCGCCCGGATACACGACGGTAATGGGATTC
AACATTCACACGCGATACGCCGCTTGGTTGGAGCTGGTGCTCATCCACTT
TATGATTCCCAATGCTTCATTTCTGGGTCACCTGTGTGGGATAATCGCTG
GGATCTTGTACGTCGAGGTGCCGGGCATAGCAAGTGTCTTGAATATCCTC
GCGCTCTCTATGTTTGGCAACCCCGGACCCTCCTATACCTACAGTAGCGG
GGCGACCAGGGTACGCCCCCCTTCCTCTGGGACACGTGAAAGCGACATGA
GGCGTTACCGTAACGGGGCTGCTACGGGGACTCCAACAGGAGTACAAACC
ACTCAATCCCGGGATTTCAATGGCGATGAAGCCGAAGAGATGGCAGTCCA
GGAGGCGCTACGACGTTCCATTCTCGACGCGGGACCCCGCGAAGCAACTC
GGGTTGGCGCGGGGTCATCGCTTGGGCAGCAGAGGTGGATGGGACAGGGA
GACGTCACACCGGCCACCGTCGAATCACATAGGTTGACGCCTTCAGCGCC
TTCAGAAGAGGATATATCGAGCGTGGAATCGGAGAGGCGGACCGGCATTG
GCTCCGCAGAGCTTCGCAGACGCCGACTGCAGCGAATGAGCGTAGACTTG
TGAGTAATGGGATTCAACATTCACACGCGATACGCCGCTTGGTTGGAGCT
GGTGCTCATCCACTTTATGATTCCCAATGCTTCATTTCTGGGTCACCTGT
GTGGGATAATCGCTGGGATCTTGTACGTCGAGGTGCCGGGCATAGCAAGT
GTCTTGAATATCCTCGCGCTCTCTATGTTTGGCAACCCCGGACCCTCCTA
TACCTACAGTAGCGGGGCGACCAGGGTACGCCCCCCTTCCTCTGGGACAC
GTGAAAGCGACATGAGGCGTTACCGTAACGGGGCTGCTACGGGGACTCCA
ACAGGAGTACAAACCACTCAATCCCGGGATTTCAATGGCGATGAAGCCGA
AGAGATGGCAGTCCAGGAGGCGCTACGACGTTCCATTCTCGACGCGGGAC
CCCGCGAAGCAACTCGGGTTGGCGCGGGGTCATCGCTTGGGCAGCAGAGG
TGGATGGGACAGGGAGACGTCACACCGGCCACCGTCGAATCACATAGGTT
GACGCCTTCAGCGCCTTCAGAAGAGGATATATCGAGCGTGGAATCGGAGA
GGCGGACCGGCATTGGCTCCGCAGAGCTTCGCAGACGCCGACTGCAGCGA
ATGAGCGTAGACTTGTGA back to top
|