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Homology
BLAST of mRNA_F-serratus_M_contig1117.1082.1 vs. uniprot
Match: D8LJN5_ECTSI (Ubiquitin conjugating enzyme n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJN5_ECTSI) HSP 1 Score: 277 bits (709), Expect = 1.140e-93 Identity = 133/146 (91.10%), Postives = 138/146 (94.52%), Query Frame = 1
Query: 1 MMTTATGEVIMVPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTVLGPNGTPHEGRLYTLRIHCGENYPDQCPHVRFVSKLNMGCVDQRSGEVQRHRLQVLAQWNRNYGIEQVLVALRNEMAGPSNRRLPQPPEGTEF 438
MMTTATGEVIMVPRNFKLLEELEKGEKGVGDHSVSFGLVDG+DIFMTDWNGT+LGPNGT HEGRLYTLRIHCGE YPD+CP VRFVSKLNMGCVDQRSGEV R++L VLAQWNRNYGIEQVLVALRNEMA PSNRRL QP EGTEF
Sbjct: 1 MMTTATGEVIMVPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNGTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQVLVALRNEMASPSNRRLQQPSEGTEF 146
BLAST of mRNA_F-serratus_M_contig1117.1082.1 vs. uniprot
Match: A0A835Z3M3_9STRA (Ubiquitin conjugating enzyme n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3M3_9STRA) HSP 1 Score: 213 bits (543), Expect = 2.200e-68 Identity = 98/146 (67.12%), Postives = 120/146 (82.19%), Query Frame = 1
Query: 1 MMTTATGEVIMVPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTVLGPNGTPHEGRLYTLRIHCGENYPDQCPHVRFVSKLNMGCVDQRSGEVQRHRLQVLAQWNRNYGIEQVLVALRNEMAGPSNRRLPQPPEGTEF 438
M+ T +GE I++PRNFKLLEELEK EKG GD + SFGLV+ +DIFMTDWNG++LGP GT HE RLY +R+HCGE+YPD P VRF+ ++N+ CVDQR+GEV + RL VL+ WNRNYGIEQVL+ LR+EMA +NRRLPQPPEG F
Sbjct: 1 MIMTPSGEQILIPRNFKLLEELEKSEKGHGDMNTSFGLVNQDDIFMTDWNGSILGPPGTIHETRLYEVRLHCGESYPDVAPEVRFLHRINLSCVDQRTGEVIKARLPVLSSWNRNYGIEQVLMGLRHEMASSANRRLPQPPEGARF 146
BLAST of mRNA_F-serratus_M_contig1117.1082.1 vs. uniprot
Match: A0A067D9H4_SAPPC (UBC core domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D9H4_SAPPC) HSP 1 Score: 200 bits (509), Expect = 3.280e-63 Identity = 92/146 (63.01%), Postives = 115/146 (78.77%), Query Frame = 1
Query: 1 MMTTATGEVIMVPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTVLGPNGTPHEGRLYTLRIHCGENYPDQCPHVRFVSKLNMGCVDQRSGEVQRHRLQVLAQWNRNYGIEQVLVALRNEMAGPSNRRLPQPPEGTEF 438
MM + EV+++PRNFKLLEELE EKG GD S+S+GL +DIF+T W GT+LGP GT H+GR+Y+L+IHCGE+YP+Q P V F S++NM CVDQ +G V R+ VLA WNRN GIEQVLV+LRNEMA P+N+RLPQ PEG+ F
Sbjct: 1 MMAKSGAEVVIIPRNFKLLEELESAEKGHGDMSISYGLEQADDIFLTSWIGTILGPAGTCHDGRIYSLKIHCGEHYPNQPPDVYFTSRINMSCVDQSNGRVDPRRIGVLASWNRNSGIEQVLVSLRNEMASPANKRLPQHPEGSAF 146
BLAST of mRNA_F-serratus_M_contig1117.1082.1 vs. uniprot
Match: K3WUW2_GLOUD (UBC core domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WUW2_GLOUD) HSP 1 Score: 197 bits (501), Expect = 5.230e-62 Identity = 90/145 (62.07%), Postives = 112/145 (77.24%), Query Frame = 1
Query: 4 MTTATGEVIMVPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTVLGPNGTPHEGRLYTLRIHCGENYPDQCPHVRFVSKLNMGCVDQRSGEVQRHRLQVLAQWNRNYGIEQVLVALRNEMAGPSNRRLPQPPEGTEF 438
M+ EV++VPRNFKLLEELE EKG GD S+S+GL +DIF+T+W GT+LGP GT H+GR+Y+LRIHCG+ YP+ P V F S++NM CVD +SG V RL L WNR++GIE VLVA+RNEMA P+NRRLPQPPEG+ F
Sbjct: 1 MSKPGAEVVIVPRNFKLLEELESAEKGHGDMSISYGLEQADDIFLTNWIGTILGPAGTCHDGRIYSLRIHCGDQYPNIPPEVAFTSRINMSCVDAQSGRVDPRRLPALVNWNRSHGIENVLVAIRNEMASPTNRRLPQPPEGSSF 145
BLAST of mRNA_F-serratus_M_contig1117.1082.1 vs. uniprot
Match: A0A024U9Q8_9STRA (UBC core domain-containing protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024U9Q8_9STRA) HSP 1 Score: 196 bits (498), Expect = 1.500e-61 Identity = 92/145 (63.45%), Postives = 110/145 (75.86%), Query Frame = 1
Query: 4 MTTATGEVIMVPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTVLGPNGTPHEGRLYTLRIHCGENYPDQCPHVRFVSKLNMGCVDQRSGEVQRHRLQVLAQWNRNYGIEQVLVALRNEMAGPSNRRLPQPPEGTEF 438
M A EV++VPRNFKLLEELE EKG GD S+S+GL +DIF+T W GT+LGP GT H+GR+Y+L+IHCGENYP+ P V F S++NM CVDQ +G V L VLA W R YGIEQVLVALRNEMA +N+RLPQ PEG+ F
Sbjct: 1 MMKAGAEVVIVPRNFKLLEELESAEKGHGDMSISYGLEQADDIFLTSWIGTILGPAGTTHDGRIYSLKIHCGENYPNAPPEVLFTSRINMSCVDQTNGRVNPRGLGVLASWQRTYGIEQVLVALRNEMASATNKRLPQHPEGSSF 145
BLAST of mRNA_F-serratus_M_contig1117.1082.1 vs. uniprot
Match: A0A6G0XR63_9STRA (UBC core domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XR63_9STRA) HSP 1 Score: 194 bits (492), Expect = 1.220e-60 Identity = 89/145 (61.38%), Postives = 112/145 (77.24%), Query Frame = 1
Query: 4 MTTATGEVIMVPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTVLGPNGTPHEGRLYTLRIHCGENYPDQCPHVRFVSKLNMGCVDQRSGEVQRHRLQVLAQWNRNYGIEQVLVALRNEMAGPSNRRLPQPPEGTEF 438
M A EV++VPRNFKLLEEL+ EKG GD S+S+GL +DIF+TDW GT+LGP GT H+GR+Y+L+IHCGENYP+ P V F S++NM CVDQ +G V L +L+ W RN+GIEQVLVALRNEM+ +N+RLPQ PEG+ F
Sbjct: 1 MMKAGAEVVIVPRNFKLLEELDNAEKGHGDMSISYGLEQADDIFLTDWIGTILGPMGTSHDGRIYSLKIHCGENYPNAPPEVYFTSRINMTCVDQTNGRVNPRALGILSNWQRNHGIEQVLVALRNEMSSAANKRLPQHPEGSMF 145
BLAST of mRNA_F-serratus_M_contig1117.1082.1 vs. uniprot
Match: A0A2D4BCZ8_PYTIN (DNA topoisomerase 2 DNA gyrase B n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BCZ8_PYTIN) HSP 1 Score: 193 bits (490), Expect = 2.630e-60 Identity = 89/140 (63.57%), Postives = 107/140 (76.43%), Query Frame = 1
Query: 19 GEVIMVPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTVLGPNGTPHEGRLYTLRIHCGENYPDQCPHVRFVSKLNMGCVDQRSGEVQRHRLQVLAQWNRNYGIEQVLVALRNEMAGPSNRRLPQPPEGTEF 438
EV++VPRNFKLLEELE EKG GD S+SFGL +DIF+T+W GT+LGP GT H+GR+Y+LRIHC + YP P F S++NM CVD ++G V RL VLA WNRN GIE VL+ALR EMA P+NRRLPQPPEG+ F
Sbjct: 8 AEVVIVPRNFKLLEELESAEKGHGDMSISFGLEQADDIFLTNWIGTILGPAGTCHDGRIYSLRIHCSDQYPTMPPEFYFTSRINMSCVDPQNGRVDARRLPVLANWNRNSGIETVLIALRAEMASPTNRRLPQPPEGSTF 147
BLAST of mRNA_F-serratus_M_contig1117.1082.1 vs. uniprot
Match: A0A6A4DSP4_9STRA (UBC core domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4DSP4_9STRA) HSP 1 Score: 191 bits (484), Expect = 8.020e-59 Identity = 87/140 (62.14%), Postives = 106/140 (75.71%), Query Frame = 1
Query: 19 GEVIMVPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTVLGPNGTPHEGRLYTLRIHCGENYPDQCPHVRFVSKLNMGCVDQRSGEVQRHRLQVLAQWNRNYGIEQVLVALRNEMAGPSNRRLPQPPEGTEF 438
EV++VPRNFKLLEELE EKG GD S+S+GL +DIF+T+W GT+LGP GT H+GR+Y+LRIHC + YP P V F S++NM CVD ++G V RL L W+RN GIE VLVA+R EMA P+NRRLPQPPEGT F
Sbjct: 49 AEVVIVPRNFKLLEELESSEKGHGDMSISYGLEQADDIFLTNWIGTILGPAGTCHDGRIYSLRIHCSDQYPHMPPDVHFTSRINMSCVDPQTGRVDPRRLAALGSWHRNNGIENVLVAIRAEMASPTNRRLPQPPEGTNF 188
BLAST of mRNA_F-serratus_M_contig1117.1082.1 vs. uniprot
Match: A0A8K1CG64_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CG64_PYTOL) HSP 1 Score: 190 bits (483), Expect = 1.890e-58 Identity = 88/140 (62.86%), Postives = 107/140 (76.43%), Query Frame = 1
Query: 19 GEVIMVPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTVLGPNGTPHEGRLYTLRIHCGENYPDQCPHVRFVSKLNMGCVDQRSGEVQRHRLQVLAQWNRNYGIEQVLVALRNEMAGPSNRRLPQPPEGTEF 438
GEV++VPRNFKLLEELE EKG GD S+S+GL +DIF+T+W GT+LGP GT H+GR+Y+LRIHC + YP P F S++NM CVD +SG V RL VLA WNRN G+E VL+ LR EMA P+NRRLPQPPEG+ F
Sbjct: 65 GEVVIVPRNFKLLEELESAEKGHGDMSISYGLEQADDIFLTNWIGTILGPAGTCHDGRIYSLRIHCSDQYPMVPPEFFFTSRINMSCVDPQSGRVDPRRLAVLANWNRNNGLETVLIGLRAEMASPTNRRLPQPPEGSMF 204
BLAST of mRNA_F-serratus_M_contig1117.1082.1 vs. uniprot
Match: A0A7S2EGX9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EGX9_9STRA) HSP 1 Score: 187 bits (474), Expect = 1.690e-57 Identity = 86/146 (58.90%), Postives = 107/146 (73.29%), Query Frame = 1
Query: 1 MMTTATGEVIMVPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTVLGPNGTPHEGRLYTLRIHCGENYPDQCPHVRFVSKLNMGCVDQRSGEVQRHRLQVLAQWNRNYGIEQVLVALRNEMAGPSNRRLPQPPEGTEF 438
M T +GE ++VPRNFKLLEELE EKG+GD ++S+GLVD D F+T+WNG +LGP GT H+ R Y LRIHCGE YP P VRFVS++NM CVDQ++G V ++L WNRN GIEQVL+++R EM SNRRL QP +G F
Sbjct: 29 MQRTPSGETVIVPRNFKLLEELEHSEKGLGDMAISYGLVDSGDTFLTNWNGGILGPPGTQHDSRFYELRIHCGERYPAAPPDVRFVSRINMACVDQKTGVVLHNKLPATRNWNRNMGIEQVLLSIRTEMCSDSNRRLRQPADGLTF 174
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 280.4 |
| Seed ortholog evalue | 4.8e-73 |
| Seed eggNOG ortholog | 2880.D8LJN5 |
| Preferred name | UBE2V2 |
| KEGG ko | ko:K03164,ko:K10704,ko:K20656 |
| KEGG Pathway | ko01524,ko04624,map01524,map04624 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000151,GO:0000165,GO:0000187,GO:0000209,GO:0000726,GO:0000729,GO:0001932,GO:0001934,GO:0002218,GO:0002221,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0002753,GO:0002757,GO:0002758,GO:0002764,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006301,GO:0006302,GO:0006303,GO:0006355,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007254,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0008283,GO:0009605,GO:0009607,GO:0009617,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010604,GO:0010628,GO:0010646,GO:0010647,GO:0010720,GO:0010941,GO:0010975,GO:0010976,GO:0010992,GO:0010994,GO:0016043,GO:0016310,GO:0016567,GO:0016740,GO:0019219,GO:0019220,GO:0019221,GO:0019222,GO:0019538,GO:0019725,GO:0019787,GO:0019899,GO:0022008,GO:0022607,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0030154,GO:0030162,GO:0030522,GO:0031098,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031331,GO:0031344,GO:0031346,GO:0031347,GO:0031349,GO:0031371,GO:0031372,GO:0031399,GO:0031401,GO:0031624,GO:0031625,GO:0031974,GO:0031981,GO:0032147,GO:0032268,GO:0032270,GO:0032434,GO:0032436,GO:0032446,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032991,GO:0033554,GO:0033674,GO:0034097,GO:0034622,GO:0034641,GO:0035370,GO:0035556,GO:0035872,GO:0036211,GO:0040012,GO:0042176,GO:0042221,GO:0042275,GO:0042325,GO:0042327,GO:0042592,GO:0042742,GO:0042981,GO:0042995,GO:0043005,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043122,GO:0043123,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043523,GO:0043524,GO:0043549,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044389,GO:0044390,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045088,GO:0045089,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045732,GO:0045739,GO:0045859,GO:0045860,GO:0045862,GO:0045893,GO:0045935,GO:0045937,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050795,GO:0050803,GO:0050807,GO:0050896,GO:0051052,GO:0051054,GO:0051090,GO:0051091,GO:0051092,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051258,GO:0051338,GO:0051347,GO:0051403,GO:0051704,GO:0051707,GO:0051716,GO:0051960,GO:0051962,GO:0051963,GO:0051965,GO:0060255,GO:0060284,GO:0060341,GO:0060548,GO:0061057,GO:0061136,GO:0061630,GO:0061631,GO:0061650,GO:0061659,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070423,GO:0070498,GO:0070534,GO:0070555,GO:0070647,GO:0070887,GO:0071310,GO:0071345,GO:0071347,GO:0071704,GO:0071840,GO:0071900,GO:0071902,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090325,GO:0097458,GO:0098542,GO:0120025,GO:0120035,GO:0140096,GO:1901214,GO:1901215,GO:1901360,GO:1901564,GO:1901800,GO:1902494,GO:1902531,GO:1902533,GO:1902680,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:1903506,GO:1903508,GO:1903827,GO:1990234,GO:2000008,GO:2000026,GO:2000058,GO:2000060,GO:2000112,GO:2001020,GO:2001022,GO:2001141 |
| EggNOG free text desc. | protein K63-linked ubiquitination |
| EggNOG OGs | KOG0896@1,KOG0896@2759 |
| Ec32 ortholog description | ubiquitin conjugating enzyme |
| Ec32 ortholog | Ec-17_002730.1 |
| EC | 5.99.1.3 |
| COG Functional cat. | O |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko03032,ko03036,ko03400,ko04131 |
| Exons | 4 |
| Model size | 534 |
| Cds size | 441 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622929003.3762794-CDS-F-serratus_M_contig1117:151977..152011 | 1622929003.3762794-CDS-F-serratus_M_contig1117:151977..152011 | Fucus serratus male | CDS | F-serratus_M_contig1117 151978..152011 + |
| 1690962664.6028032-CDS-F-serratus_M_contig1117:151977..152011 | 1690962664.6028032-CDS-F-serratus_M_contig1117:151977..152011 | Fucus serratus male | CDS | F-serratus_M_contig1117 151978..152011 + |
| 1622929003.3907037-CDS-F-serratus_M_contig1117:159861..160001 | 1622929003.3907037-CDS-F-serratus_M_contig1117:159861..160001 | Fucus serratus male | CDS | F-serratus_M_contig1117 159862..160001 + |
| 1690962664.612829-CDS-F-serratus_M_contig1117:159861..160001 | 1690962664.612829-CDS-F-serratus_M_contig1117:159861..160001 | Fucus serratus male | CDS | F-serratus_M_contig1117 159862..160001 + |
| 1622929003.4044025-CDS-F-serratus_M_contig1117:160323..160509 | 1622929003.4044025-CDS-F-serratus_M_contig1117:160323..160509 | Fucus serratus male | CDS | F-serratus_M_contig1117 160324..160509 + |
| 1690962664.619768-CDS-F-serratus_M_contig1117:160323..160509 | 1690962664.619768-CDS-F-serratus_M_contig1117:160323..160509 | Fucus serratus male | CDS | F-serratus_M_contig1117 160324..160509 + |
| 1622929003.4183354-CDS-F-serratus_M_contig1117:161215..161296 | 1622929003.4183354-CDS-F-serratus_M_contig1117:161215..161296 | Fucus serratus male | CDS | F-serratus_M_contig1117 161216..161296 + |
| 1690962664.627111-CDS-F-serratus_M_contig1117:161215..161296 | 1690962664.627111-CDS-F-serratus_M_contig1117:161215..161296 | Fucus serratus male | CDS | F-serratus_M_contig1117 161216..161296 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622929003.463108-UTR-F-serratus_M_contig1117:161296..161389 | 1622929003.463108-UTR-F-serratus_M_contig1117:161296..161389 | Fucus serratus male | UTR | F-serratus_M_contig1117 161297..161389 + |
| 1690962664.6350815-UTR-F-serratus_M_contig1117:161296..161389 | 1690962664.6350815-UTR-F-serratus_M_contig1117:161296..161389 | Fucus serratus male | UTR | F-serratus_M_contig1117 161297..161389 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1117.1082.1 >prot_F-serratus_M_contig1117.1082.1 ID=prot_F-serratus_M_contig1117.1082.1|Name=mRNA_F-serratus_M_contig1117.1082.1|organism=Fucus serratus male|type=polypeptide|length=147bp
MMTTATGEVIMVPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWN GTVLGPNGTPHEGRLYTLRIHCGENYPDQCPHVRFVSKLNMGCVDQRSGE VQRHRLQVLAQWNRNYGIEQVLVALRNEMAGPSNRRLPQPPEGTEF* back to topmRNA from alignment at F-serratus_M_contig1117:151978..161389+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig1117.1082.1 ID=mRNA_F-serratus_M_contig1117.1082.1|Name=mRNA_F-serratus_M_contig1117.1082.1|organism=Fucus serratus male|type=mRNA|length=9412bp|location=Sequence derived from alignment at F-serratus_M_contig1117:151978..161389+ (Fucus serratus male) ATGATGACAACTGCGACCGGAGAGGTTATTATGGGTGAGTGCTTCCTCGA
TACTCTTAGACCAGCCGACCTTGTCCGTTTTTCAGCGAACGACTGAGGAC
TTACTTGTCAGCACCCAATTGTCGAAGGGAAGCAAAAGAGTAGCATCTCT
CGAAGCCCAGAAATGAGGAACTCTGAGCAAAGCCGTAGTAATGGACGTTA
TCATCATACCTGCTTGTGCCCCTTTGGTGTTTTGATCGATGCTGGAATGA
TGGGACATCAAGAATAGTCCATCTATATATGATAAGACGTTCCTCAAGGG
CTGTCAGGACAGACGTGGAGTCGGTGTTTCGTTTTAAAGGTTGTCCTGCG
AGTACTCTGCACCTGACTTGTTTTTCCTCTACTGGAATTTTGATTTTGTC
GAATTTCAACTCTGGCTAAAGATTGAAGCATCGGTCGTCAAATTATCTAA
CATTAAAACATTAAATATCGAAACCTAGGTTTTGTATTTGCAGCCTATGA
TGACATTTTCCGATGACTGGGGGGATGCTCAGACTAGACATAGATGAGTT
CAGAGTTTTCTTTAAACTACTCTTACATACTTACGAGGTACCCGCCGGGG
CTTCGTCTTGAATCCAGACATTGCGCAGAAGATGCCACTGCTGTTGTATT
TGAAATCAAAGTTTAGTCCATGACAAGTTTTCACGCCGATGCCAGACCCG
AAAATATCCCGACAGGAGTCCGGGGGCAGGCCCTTCATTTGCTCGAAGAG
TTCAACGTACGCATACATTAATAGTATAATACTTACAGTAGTACGAGTAC
GGTGGTACACAGCCATTTCCATATGTACTCTATATTTAATACTCCGTAGA
ACACTCATCTACTGTACCGGTCGTGAGTGTGGGTAAAAAGAGGGGCGCAA
ATAAACTGTCTCACGGGGTTTCCTCCGTAGGCAGTACCCGTTACTCAAGC
TATCTCCAGGACTGTTGGCCCTGCGCCGGCGGACTCTCGGCGATGAGTGC
GATAGGCAAGGAAATACGTGAAGTGGTTAACTCAGGGCTGGCCCGATAGC
GGTTGACCGTATATATAGACACCGTCGCGGAAAGCGGAATGCAGGAGAAA
ATCTCACTGTTAATAATAGGTCCTAGATTCAGCCTGGGTTAGGAAAATGA
CCGGGCTGACGCGGGAAGGGACGGCCGAACCTGTCTCGCGAGACAAGGCT
TGAACGGGGACAGGGAGAGCGATTTTTTTCTGATCAGCTGATCACGAGCA
GGGTTGGCTACCATACCCGGTTGATGTCCAGTCTTTTGAAAATATTGGCC
AACTGCTGTAGCGTGTTCGACCAGTCGCGCCAAGTAGATTCCTCTGTGCT
CGGGACTCGGCAGAGCTGCAGTCATACAGACCAGGCTTCGCGGCTGTAGG
TGCTCAGCTTTTATCAAGAGCAAGAGCGGTTCAGCGAAGGTCTGAGGGGA
AATAAGCACGGCGCACAGCGGACGGTAGAATCTGAACCTGATGACCACAC
ACACAAAGCACAGGCCACACTCAACGAAAAACATTTATTAAAAGAAAGCG
TTCACTTTTTTTGGTTTGTGCTATGCACATTTAATTTATTTGGCACCACG
ATTTGGGTGGATCATAATCGGGGCAGGCTTCAGATGTGGCCGCCCGATTA
CGCGCTCTTCTACGTTTACATTGATTTGATAACAAGCAGTAATACGTGTC
ACTGCCATGATTTGATCTCACTGTGAAAGGCATTGCTGCGAAGGTCACAA
GCCGCCAACCCACGACCGGAAGGTGACACGTAATGTAGTAGTAGGTCGGG
TCCTGATGATACCGGTTCTGACAAAGAGTCTCCTTCGATCCGCATTCAAC
GAAAAAATGATGGCGTTGGGGTAGCGACCCTTGCTTTTGAGGCAGGCGAA
GAAGCGCGAAAGACAGGAAAACAGTAGGGAGCGACTCGTGTGAAATTAAA
CAGTACGCAGCGGCGCGATCGGTTCTTACGAAGGCCACCAACTAACCCGC
GACCTGGAAATCAACGACGAGCCTATCAGCGCTGTAGCCTAAAATTTATA
TTTCTTCTTGACCGCTATATCGTATACCTGGTATGCGAGAGTGATTTGAG
CTAATCTTACACCTGATGAGAGCACAACCCTGTCTATGCCTACCGACCGA
GGGCACGCGAGGGGCGCCCGATCCTACGCACACGCTGACCAATTTTCAGC
CGCCACGATCCCGATTGAAAAATTGAGCCTCGATCGATCTTGCTGGGGCC
GTCCTCCGAGATCAAACGTTGAGTTGCATGCCAAATGTCTCGATTCTGTT
TCCGTTGCTCGTAGAGCCACATCGGCTTTTCTACCAAAAACAGAGATGAA
CCCGATACTTATTTGTATCCGGTTTACGAAATCGCGAAGCCCTGCCCAAT
TAAGGTCGGTCTTATGAATATATTGGGCTTTAACTACTGGGCATGCTGTG
CGATAGTGTTGCCGTTGAAGATCAACTATTACTATTAGGAAATGGCTATT
TGGCCCACCGGTGGGCCATTCCCAAATTTACCCCACCACCTGGATCTCGC
GTCAGAAGATACGGTTGGTGACAATACATGCATGAGTGTGTTGGCGCGTC
GCAGGGCTATCATGGGGTCTATCGTGCAGCCCAAACGGTTCTGTCTACGT
GCTGTTACGGCCGGTGGGGTGGTTGGTGTTTTCTGGTATGTAAGGGCAAA
TAGCCTAACATACCAGAAAACGCCAACCACTCCACCGGCCGTGGCAGCAC
GTAGACAGGACCGTTTGGGCTGCACGATAGACCCCATGATAGCTAACCCT
AACACATCCATGCATGTACTGTGACCAACCAAGTCTTCTGACGCGAGAAC
CAGGTGGGGGGGTAAAGAGAATAGGCCACCGGTGGGGCAAATTGCCGTAC
CGTTAATATTAATAACTGAGACCTCTTATATTATTATTTTCTTCCTTGAC
GCGTTGCTTGCGCGAACTCTATAGTTAAAATAATAATAATCTGAACGCAT
TTAAACCTTCTGAGCATCCACCCAATCAGGGGGTGTTCCATCTTGCTGAA
AAGGGATTTTTATGTTGTAACTTGAAGTAAGGTCTGAACGAGACCTTCTG
AGCATCCCCCAGTCAGGTGGAAAACATGTCAAAACGTTTGGGTGGGATTA
TGGGCTGCAAAGACAAAACATTACTACAAGACGAAGTTAAAACCCTGTGC
GAAGGCCAACCCCTAAAGCTCTTAAGTGTGACTCTCAAGTCACTTACATG
CCCATTGGATATGCAGGCAGAGTAACAATTGCGAGTCTCGCTTGGGGTTT
CAAAGCGATACGAAGGCTGACGATATGCAGGTCCTTTCAGGGCCGGTACT
AGCGGAGTTTTTTTTTGCTATTTGGGGCGTCATGCCATCGGTATGCAACT
CTGCGACCTGATAAAACTCGGGACTGATCCTATCGATGATGGCGGTGGAC
GGTATGGATGGACGAAGGAGAGGATAAGGAGCCCGTGAGTAAGCACCCGA
TTCAGCCTGGGTGTGGAAGACTAGTAATAGCGGGTCAACGCGGGACAGGG
ATATATATAGAGAGAGAGAGATTCATTTTCCCTGTTCAGCTGACCACTAT
TATAGCAGGATTGGCAACCACACCCGGGTATCGCCGTTACTTTCAACATG
CCCACTTCATAACCAATAGTGGGTGTGGGAAAGAAAGGCGTATATTAATT
GGTCCATAGTGACCTGCGAAGGCAGCACTCGTTCGAAACTACCTTGAGGT
ATGCTGGCCCTGTGCCGGCGGATTCTCGGCAGTGAACGCCATCGGTACGC
AATTGCGTGACCCGATTAAACTTGGGACTGACCCGATGGCGTATGGCGGT
TTAATATTAATATATGGACGCCGCCGCGGAACTCGGGAGGAATCCCGTAA
GTAAGCACCAGATTCAGCCTGAGTATGGAGATGAGCAGGCTGACGCGGGA
CGGGACTGCCGAAACCGTCTCGCGAGACCAAATTCCCAGGCGCGAACGCG
GACAGGGGAATATTATTTTCCCTGTTCAGCTGACCACGAGCAGGATTGGC
AACCTTAACAGGTTGATCCATACTCTTGCTATATGTGTGACCATACATGT
CATGTTCTGCTGAAAGTGCAGACCATACACATAAACCTATTAATAGTAGA
TAATATTACCGTGATGACCGTATAATTAATAAAATTGAACAAGCCGGCGC
TAAGTATATCTAGTTGCTAATTATGCGGGGACAAGTCGGCGTTGACTAAA
CCTGATTGATCCATACTCTTGACTGTATGTATGACCATAAGCTCATCAGA
AAAACTACTATATAATATAGTATATAATATAGTCGAGGGGTCCTGGTTTC
TAACCCACGATCTACCATGTGGGGAGCGTTTGATTAACCAAATACACTAG
TCAGTGCTGACTAGAGGGGAGCCGCTCTCTTCGAAATGAAAATGCCTTGT
CCTTCGACCCCACGACTAGCTGTTGTGATTGGCGTATAATTAACAAATTA
GACAAGTCTTGTCTAATTTGTTCATTATCACAGTACATCCTAGCGCAGTC
ACAGGACTCTCAAAAACCGCTTATGTATAGTCACATATATAGCAAGAGTA
TGGATCAACCGGATAAGGTTGCCAATCCTGCTTGTGGTCAGCTGAACGGG
AAAATGATATTTTCCCTGTCCCCGTTCGCCCCTGGGAATGTGGTCTCGCG
AGATGGGTTCGGCATTCCCGTTCCGGGTCAGCCTGCTCATCTCTCCATAC
TCAGGCTAAATCTGGTGCATCCTTACGGGATTCCTCCCGAGTTCCGCGGC
GGCGTCCATTTATTTATTTGAAACCGCCATACGCCATCGGGTCAGTCCCG
AGTTTATCGTGTCACACAAATGCGTACCGATGGCATTCACTGCCGAGAGG
CCGCCGGCATAGGGCTAGTAAACCTCAAGGTTGTTCCAAACGGGTGCTGC
CTTGACAGATCACCTAGGATCTATTAATATGCGCCTCTCTTTCCCACGCC
CGCTATCGGTATATAGAGTGGGCATGTTGAAAGTACCGGCGGAAAATATA
TAAAATTCAATCAGTCCAAGTGGCACGCGCGAAGTGCTTTGACACCCTTG
AAATCTCGCCCAACACCTCCCCCTGAGCGTCGGGCACCTCCAAACAACGA
CAACTAGCCAACGCCAGGTGTCCGCAGTTCCACCACGTTCACAAGGTGAG
AGCTCGAAGCACCCGCGGAAACAGCCGCGCGGTAGCTATTACAGCTGGAC
TGCAGTATAATGCAACGGTTTTTCGAAATACCATCAATACAACATATAAT
CGCCGTTACATTCAACATGCCCACTTCGTACCAATAGTGGGTGTGGGAAA
GAGGGGCGTATATTAATTGGTACGTGGTGACCTGCGAAGGCAGCACTTGT
TCGGAACTACCTTGAGGTTTACTAGCCCTGTGCCGACGGACTCTCGGCAG
TGAACGCCACCGGTACGCAATTGCTTGACCCGAAAAACGCGGGACTGACC
CGATGGCGTATGACAGTTTAATATGAATATATGGACGCCGCCGCGGAACT
CGGGAGGAATCCCGTAAGTAAGCACCAGATTGAGCCTGAGTATGGAGATG
AGCAGGCTGACGCGGGACGGGACTGCCGAAACCGTCTCGCGAGACCAAAT
TCTCAGGCACGAACGTGGACAGGGGAATATTATTTTCCCCTGTTCAGCTG
ACCACGAGCAGGATTGGCAACCTTACCCGGTTGATCCATACTCTTGCTGT
ATGTGTGACCATACATGCACCAGGTTATAGTGACGCCTAATGTGCGAAAT
GTATGCTATACAAAAAACAGTACCGTCTCCCTGACGTCAGCAAGAAAAAT
CCCAGCGGTCTTCAGTATAGCACTTGAACCCGCTACAAAGGTCGCCGACG
TCGTGCTGGCACACAGGACTACGGCCATCCATGATGTCAGCAAGCAAAGC
ACCCTTATCGTTGGATTCATCTTGCTCACTCCTAGAGCCGTCGAGCGCTG
GGCCCACGGGCTGACGCTCTTTCGAATCGTCTCGAGTGTTGACTCGATCT
ACTCCTATCGCCACGGGCAGCAGCAGGACATAGGAGCACCGGCATTCCCT
TTGAGACTAGCGCTGATGTACTTTGTAGCGGAAATGGACCGATTTTTCCG
TCGCGGATTCGACAATGAGACGGGAAGCAACGAGTCATCTTGCGTGGAAT
CTTTATGCCCAAGGCGTCGCTCCGCGGCGTGCTAGTGTGGCACCTGCGGG
CCCAAGACGTCTTGGTTCCAAGGTTGGGGGTACTGTATCCTCTACCGTGG
CTTTCGATGTCCCAAAAAGGGACGCAAATTGGACGTTTGTTGACATGTTT
TCACAACGTGGAGTCTTTTTTCTTCCAAATAACGATGTTGTAGAACACTT
TGAACTCAACATGGTTTTCGACATTTTGACGTTCGTCTTTACTCTTTTTG
ACGTTTTTCGTGACATATTTCCTGCGCAGCTAAGGGTTCCGGCACTTTCA
AAAAGACATTGAGCGGAAAACAGGAAAAATGAAACTTGTAAATGCGGCTA
GTAAATGCATGGGCGCCGAGTGACTCATCCCCCCCACGGATAGCGCAAAC
ACAATAAAATCAAAATTACTCTTGGGTGCCAAAGTCATGGTGGTCTTTAA
GAAAGTTGAAGCGAGGATCGCTCATGTTACCACTCCTTGAATCAATCTAG
AGATGGCTTAGCAGGGGGGGAGACTGAACGTTATGGGGGAAAATAACCCT
TGATTGGTGGAGACAGCCAGCACTCCTAAGGCCAACGTGGATATCGTGGG
ACTTGTTTCCACGCGACTCAACTGCTTCAGCTTGGGTCGCAGCAACCCTC
GTTAAAAAAAAAAATCCGCAGCAGTGGCGCACTTATTTCGATCCCTGGTG
CCTCCGGCGAGCAGCACATCTAAACCCTACCCGTTCACACGTTATGTGCC
ATCGGGGGGGGGGCGCACTCGGGAGCAATCGCTTCGTTTGGGCGATGGAG
ACCTCGTGCTGGCAACTGAACTCCCTGAATGCTATTAATAGGAAACAAGT
CACAGCGGCCCGCGGCAGTACTGCGTTTAAGGATAAGGTACAACCGAAAA
GACTGCTTATTACTATTACTAGACCTCGCGACAAAAAAAGGTGCGTGTGC
GTGCGCAACGTAATATACGATAGCGCAGTAAAAAAAAAGGGGAGGGGGTC
TATGCAGGCGCGAGACGAAAAGACGTCACGTATTTCTACAATATGTCCCG
TGCCTTTCCCCGCTGCCATGCCCCATGCCCCGTAGCGTCCATTGTGACTC
CCCGTTGGAGTTCCGCCGTTGCCTTACCTCCGCCGCGGTTGCTCGGGTGT
ATCCGGTGAACATCCGTCATGAGCGCGGGCGTATTAGTTCATCGTGGGAC
AAAACTGTGCCGAAATGCGTCCGGGACCTTAGCAGCAAGGCCTCGAGCGA
GCGGCAGCAACAGTTGCGTCGTATTTTGCTTTACACCTCTCGATTGCGTG
CTTTCTGTCGCAACAGTATGCGCGATTTAAGAAGAAAAAAAAACACATTA
TTTTTGCCCTTGACGCCCCTGACTATGTGTCAACCTTGTAGAGAAGACAC
TTTTGTGAGGGCTCGCAAAAACTTCCATCACGCCCGACGCCGGCTGGGGT
AGGAGGTGAGTTTGAGTTACGTGACGCCACGCGTGACTGCTTTTGCTGTC
AAGGCCGCCAAGAGGCTAAGTTGGTGGTGCGAGAGCTGCGCTGCCGAGAG
GATGAGGCGTCAAAGCCAAACTGACATAGCTGCGCGTGGAAAACAACTTT
TCTTACAACGCACTTGATTTTAGTATACTTTACGCGAGCAATGTCGACCA
CCGCCGCTGTTACGTCTCTTGTTATCATGCCCAGTCCCGCGCAACTTCAA
GCTGTTGGAGGAGCTCGAGAAGGGCGAAAAGGGCGTGGGGGATCACAGCG
TGAGCTTTGGCCTGGTGGACGGGGAGGATATCTTCATGACCGACTGGAAC
GGAACCGTCCTTGGACCGAACGGGGTGCGCCGGTCGGGTATTTTTTTTAT
GCGGGACTTGGCTTTGTGTATTCTGTAGCGCCTGTGATTCGGGTCCCGTC
GTCGACTTTTCCTTCCCCGTGTAGTATACTCTTTTAAAAGGCGAAATCAT
CTCCCTATTAGACACGTTAAGTGTTGGAAGGCCACCTATCTATCCCCCGT
CCGGTCGTCCAGCGTTACTTGTGAGGGAAAAAGACTCTGCTCTGCGAGAA
AACCGACAAGTGCAGTAGTGGCTCGTTGTCACCCTCAGACCCCACGCGGG
CTCCGGCGTCCCCAACGTCTTGTTTTTCGTCGTTCCGTCCGGATAGACTC
CGCACGAGGGCCGGCTCTACACGTTGAGGATTCACTGCGGAGAGAACTAT
CCCGATCAGTGCCCGCACGTGCGCTTCGTGAGCAAGCTCAACATGGGCTG
TGTCGACCAGAGAAGCGGCGAGGTACAACGACACAGGCTTCAGGTGCTGG
CCCAGTGGAACAGGAATTACGGCATTGAGCAGGTGGGGAAGGCGTGATCA
GAGCGGGGTGGGGGAGGGGATGGGGGGAGCAAAGACGGAAGCTGTCGCGT
GTTCAGGGCTTTGGCGCGCTGTAGGTTTTGCAGCCGCAGCCGCCTCGCAT
GGTTGGCTTGTACAGATGAAACCATCGGTGCAAAAGAAGCTCAACCCGGC
TCCGAAAAGCATCCCTCGTGAAGATCCTGCGTGTACTGAGCTCAAGCGAC
GCATACGCGATCGGTATCTTGGCGTGTGTTTGCTGGGTATGATTTCGAGT
TCAAGTTTATGGAGTGTATCTAGTTCCGTACGCGAGAACGAATCGCTCCC
GAAATGTTTTTGCAGTGCTTCACGTTCTTCACCTTCCAATGGTGTTTGCT
GTGTCGCGATGTCGTGTGTACTGGCTGAGAGGAAACGTGTCAAGTGTTTT
GCGCGGATTGGCCCGGCGGGCAAGCTTTTTTTTCTTGGTTTTCTTGGTTT
TCTTGGTTTTTCGCTCTCACTTATCCTGAAAAATGCAAAAATGTATGCTC
TCCCCTTCCATCCTCAGCATCGCATTTTTACACCCCATTCGCGACAAAAG
TCCGTGGACTTCCGCACTTTCTCTCAATCGGTTCACCGTAACGCAGAACG
TATTCCGTCCCATTCCGCGTCCGCGTGTGCCTATCTTCATTCCTTCGAAC
GAATCCCTACCGTGGTAAAAAACAATCGCCGCTTTCAGGTACTGGTGGCC
CTAAGGAACGAGATGGCTGGTCCCTCGAACCGCCGACTCCCCCAGCCGCC
CGAGGGCACTGAGTTCTAGTCTAGTTGTGAGCCTCCGAATTGGCAAGGGA
AGGTGGAAGGAGGCTTGGTTTGCGGAAGAGAAGAGCCCGATCCCTTCCAC
GATCCCCCCCCC back to topCoding sequence (CDS) from alignment at F-serratus_M_contig1117:151978..161389+ >mRNA_F-serratus_M_contig1117.1082.1 ID=mRNA_F-serratus_M_contig1117.1082.1|Name=mRNA_F-serratus_M_contig1117.1082.1|organism=Fucus serratus male|type=CDS|length=882bp|location=Sequence derived from alignment at F-serratus_M_contig1117:151978..161389+ (Fucus serratus male) ATGATGACAACTGCGACCGGAGAGGTTATTATGGATGATGACAACTGCGA CCGGAGAGGTTATTATGGTCCCGCGCAACTTCAAGCTGTTGGAGGAGCTC GAGAAGGGCGAAAAGGGCGTGGGGGATCACAGCGTGAGCTTTGGCCTGGT GGACGGGGAGGATATCTTCATGACCGACTGGAACGGAACCGTCCTTGGAC CGAACGGGTCCCGCGCAACTTCAAGCTGTTGGAGGAGCTCGAGAAGGGCG AAAAGGGCGTGGGGGATCACAGCGTGAGCTTTGGCCTGGTGGACGGGGAG GATATCTTCATGACCGACTGGAACGGAACCGTCCTTGGACCGAACGGGAC TCCGCACGAGGGCCGGCTCTACACGTTGAGGATTCACTGCGGAGAGAACT ATCCCGATCAGTGCCCGCACGTGCGCTTCGTGAGCAAGCTCAACATGGGC TGTGTCGACCAGAGAAGCGGCGAGGTACAACGACACAGGCTTCAGGTGCT GGCCCAGTGGAACAGGAATTACGGCATTGAGCAGACTCCGCACGAGGGCC GGCTCTACACGTTGAGGATTCACTGCGGAGAGAACTATCCCGATCAGTGC CCGCACGTGCGCTTCGTGAGCAAGCTCAACATGGGCTGTGTCGACCAGAG AAGCGGCGAGGTACAACGACACAGGCTTCAGGTGCTGGCCCAGTGGAACA GGAATTACGGCATTGAGCAGGTACTGGTGGCCCTAAGGAACGAGATGGCT GGTCCCTCGAACCGCCGACTCCCCCAGCCGCCCGAGGGCACTGAGTTCTA GGTACTGGTGGCCCTAAGGAACGAGATGGCTGGTCCCTCGAACCGCCGAC TCCCCCAGCCGCCCGAGGGCACTGAGTTCTAG back to top
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