mRNA_F-serratus_M_contig1117.1079.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1117.1079.1 vs. uniprot
Match: A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE) HSP 1 Score: 591 bits (1524), Expect = 3.090e-184 Identity = 337/672 (50.15%), Postives = 421/672 (62.65%), Query Frame = 3
Query: 1434 LKRAGRSSDLRSNMFSAKAVTPLGAAALRSNWVLFRMLYDLYETLRKGRWSREEVLNQLPVKAPRAFSIENNQGMHEFRDDVDASLRSGAEGLSAVMWHDIVQAYQRATPEEPGGVKE-----DFPSWRGYFRDYSRRAVEVAIETMFFDDLKELVKEGFPLHDEQIPRLLENIEDHEQDVIDVVMYAVGNASNPLVMAAGVSKNVKTAEAESPTHRIGLRRLQNIVDEVTNELLNKLPHTVRGMGLTLLRPIVPEGRLSQIQQRRRDVLANLVGFIAVEWMLEPQLLVGSASDKKNYDGPNYVDPLQRAVDRDSEALQFVNKPLVLDYLHVKFNCGLPHWNSRKPDLASINEGFYTFYDFDRYAL-SMLSGKSSNTPKEKN----VSPEAW-----DTFLLRFLQGWNPDRDDATLDVQHNLEREKSGTRLMKSDVSNEEEGKGLP----DRNEFPRSTILPGLQFLLAGIIGKPETFYEVPAILFTFELLSYLIMLVLFCSCVILEESDHISRREWAFYFFGAGMVWREILEFLDGVPARQFRKGRNERRG---------ASPSTRSTRRRRIKYPGSGKPGGKSLNRMVSGCARYILHDTWNLLDVLSIVFVLVAFVFRLKGLTRFGGLSKPGDDFFIAQFFLACSAPLLFARLLLLSQIDGTLGPMIQ 3365
+K G S R+ + S+ TPL AAL NWVLF+ +Y++YE L RWSREE+L LP+ + + Q MHE V S G ++AV+W D+V+AYQRA E V E D PSWR F+ SR+AV +A E FDDL+ELVK G PLHD+ IP LL + ED E++V+D+VMYAVGNASNPLVM AGVSKN++ AE + P HR LR LQ IVD + N+LL+KLPHTVRGMG+TLLRP+VP RL +QQ R D LANL G++ VEW+LEP+ L A+ K Y+GP+Y+DPLQRA+DR S+AL FV+ PLVLDY++VKF+C LP+W S +IN GFYT+ FD Y +LS + P E N + P+ W D LLRFLQGWNP +D+S EE+ +G DRN+ P +T+LP LQF LAG+IGKP FY VPA+ F E L YL+ML LFC+CV L++S I E AFY F AG +WREILEF DGVPAR R A+ S R + Y G+ L R+ S RY+ +DTWNLLD L++ V +AF+FRL G+ FGG + PGD FF+AQFFLA SAPLLFARLL LSQID TLGPMIQ
Sbjct: 541 MKPTGSKSSARTTVESSS--TPLAGAALSGNWVLFQKIYEMYERLTDQRWSREELLRHLPIASQDKIMLGQCQAMHECDPHVHTSFGRGVGNVTAVIWRDLVEAYQRA--EVKCAVIELSEMSDIPSWRDTFKSLSRKAVGLAAERGAFDDLRELVKAGLPLHDDLIPTLLTSAED-EEEVMDIVMYAVGNASNPLVMGAGVSKNLRRAEVDCPMHRAKLRCLQQIVDHLMNQLLDKLPHTVRGMGMTLLRPMVPHHRLPGLQQHRLDTLANLAGYMVVEWILEPRHLNRQATVGKRYNGPDYMDPLQRALDRGSKALFFVDSPLVLDYIYVKFSCTLPNWASSSSIPKTINAGFYTYTAFDEYEFWEVLSVRPG--PPEANQGGALQPQPWNSKKWDDRLLRFLQGWNP------------------------TDMSPEEQPRGRSTRRSDRNKLPHTTVLPMLQFSLAGLIGKPAVFYNVPAVRFALEFLHYLVMLGLFCACVKLQDSYRIPPAEVAFYVFMAGTLWREILEFCDGVPARHRRXXXXXXXXXXXXXXXXTAAQWASSKRSDTVDYE-----QGRGLKRVASAITRYLFYDTWNLLDTLTLSTVFLAFIFRLLGIREFGGPADPGDYFFVAQFFLAASAPLLFARLLRLSQIDSTLGPMIQ 1176
BLAST of mRNA_F-serratus_M_contig1117.1079.1 vs. uniprot
Match: D7FX79_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX79_ECTSI) HSP 1 Score: 578 bits (1490), Expect = 2.080e-182 Identity = 325/662 (49.09%), Postives = 407/662 (61.48%), Query Frame = 3
Query: 1431 TLKRAGRSSDLRSNMFSAKAVTPLGAAALRSNWVLFRMLYDLYETLRKGRWSREEVLNQLPVKAPRAFSIENNQGMHEFRDDVDASLRSGAEGLSAVMWHDIVQAYQRA--TPEEPGGVKE---DFPSWRGYFRDYSRRAVEVAIETMFFDDLKELVKEGFPLHDEQIPRLLENIEDHEQDVIDVVMYAVGNASNPLVMAAGVSKNVKTAEAESPTHRIGLRRLQNIVDEVTNELLNKLPHTVRGMGLTLLRPIVPEGRLSQIQQRRRDVLANLVGFIAVEWMLEPQLLVGSASDKKNYDGPNYVDPLQRAVDRDSEALQFVNKPLVLDYLHVKFNCGLPHWNSRKPDLASINEGFYTFYDFDRYALSMLSGKSSNTPK------EKNVSPEAWDTFLLRFLQGWNPDRDDATLDVQHNLEREKSGTRLMKSDVSNEEEGKGLPDRNEFPRSTILPGLQFLLAGIIGKPETFYEVPAILFTFELLSYLIMLVLFCSCVILEESDHISRREWAFYFFGAGMVWREILEFLDGVPARQFRKGRNE------RRGASPSTRSTRRRRIKYPGSGKPGGKSLNRMVSGCARYILHDTWNLLDVLSIVFVLVAFVFRLKGLTRFGGLSKPGDDFFIAQFFLACSAPLLFARLLLLSQIDGTLGPMIQ 3365
T++ AG S R+ + S+ TPL AAL NWVLF+ +Y++YE L RWSREE+L LP+ + + Q MHE V S G ++AV+W D+V+AYQRA T E G +E D PSWR F+ SR+AV +A E FDDL+ELVK G PLHD+ IP LL SNPLVM AGVSKN++ AE + P HR LR LQ IVD + N+LL+KLPHTVRGMG+TLLRP+VP RL +QQ R D LANL G++ VEW+LEP+LL A+ K Y+GP+Y+DPLQRA+DR S+AL FV+ PLVLDY+HVKF+C LP+W S +IN GFYT+ FD Y S + P+ + + + WD LLRFLQGWNP N E + G +S DRN+ P +TILP LQF LAG+IGKP FY VPA+ F E L YL+ML LFCSCV L++S I E AFY F AG +WREILEF DGVPAR R +N+ + + + + +R G+ G+ L R+ S RY+ +DTWNLLD L++ V +AFVFRL G+ FGG + PGD FF+AQFFLA SAPLLFARLL LSQID TLGPMIQ
Sbjct: 557 TMQPAGSKSSARTTVKSSS--TPLAGAALSGNWVLFQRIYEMYERLTDQRWSREELLRHLPIASQDKIMLGQCQAMHECGRHVHTSFGRGVGNVTAVIWRDLVEAYQRAEVTSAEIEGSEEVISDIPSWRDTFKSLSRKAVRLAAERGAFDDLRELVKAGLPLHDDLIPTLL--------------------TSNPLVMGAGVSKNLRRAEVDCPMHRAKLRCLQRIVDHLINQLLDKLPHTVRGMGMTLLRPMVPHHRLPGLQQHRLDTLANLAGYMVVEWILEPRLLNRQATVGKRYNGPDYMDPLQRALDRGSKALDFVDSPLVLDYIHVKFSCTLPNWASSSSIPKTINAGFYTYNAFDEYNFSEVLSVRPEPPEANPGGGSQPCNSKKWDDRLLRFLQGWNP--------TDMNPEEQPRGKSTRRS------------DRNKLPHTTILPMLQFSLAGLIGKPAVFYNVPAVRFALEFLHYLVMLGLFCSCVKLQDSYRIPPAEVAFYVFMAGTLWREILEFCDGVPARHRRHRKNKHIKEGNQANMATAVQGASSKRSDMVDYGQ--GRGLKRVASAITRYLFYDTWNLLDTLTLSTVFLAFVFRLLGIREFGGPTDPGDYFFVAQFFLAVSAPLLFARLLRLSQIDNTLGPMIQ 1174
BLAST of mRNA_F-serratus_M_contig1117.1079.1 vs. uniprot
Match: D8LH99_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH99_ECTSI) HSP 1 Score: 471 bits (1212), Expect = 2.210e-139 Identity = 285/670 (42.54%), Postives = 377/670 (56.27%), Query Frame = 3
Query: 1491 VTPLGAAALRSNWVLFRMLYDLYETLRKGRWSREEVLNQLPVKAPRAFSIENNQGMHEFRDDVDASLRSGAEGLSAVMWHDIVQAYQRATPEEPG----GVKEDF-----PSWRGYFRDYSRRAVEVAIETMFFDDLKELVKEGFPLHDEQIPRLLENIEDHEQDVIDVVMYAVGNASNPLVMAAGVSKNVKTAEAESPTHRIGLRRLQNIVDEVTNELLNKLPHTVRGMGLTLLRPIVPEGRLSQIQQRRRDVLANLVGFIAVEWMLEPQLLVGSASDKKNYDGPNYVDPLQRAVDRDSEALQFVNKPLVLDYLHVKFNCGLPHWNSRKPDLASINEGFYTFYDFDRYALSML------------SGKSSNTPKEKNVSPEAWDTFLLRFLQGWNPDRDDATLDVQHNLEREK----SGTRLMK--------------SDVSNEEEGKGLPD---RNEFPRSTILPGLQFLLAGIIGKPETFYEVPAILFTFELLSYLIMLVLFCSCVILEESDHISRREWAFYFFGAGMVWREILEFLDGVPARQFRKGRNERRGASPSTRSTRRRRIKYPGSGKPG-GKSLNRMVSGCARYILHDTWNLLDVLSIVFVLVAFVFRLKGLTRFGGLSKPGDDFFI--AQFFLACSAPLLFARLLLLSQIDGTLGPMIQ 3365
++PL AA SNW+LFR +YD YE RW R++VL Q+P PR S+ Q MH+ DD+ A + GA + AVMW DIV+AYQRA P GV + PSWR F+ YSRRAV+ A + F L++LV+EGFPLH+ IP LLENI DHE+D+I+ ++ V NASNP M AG+S+ ++T+E + P H++GLRRLQ+I+D+ T ELL+KLP TVRGMG+ L+ P Q + L NL GFIAV+W LEP++L+G + + Y P+Y+DPL+RA+DR S+ G Y + DF+ Y LS + G+ S KE +S TFLLR LQGW+ + + R K SG + S +N + P+ + P ST+LPGLQF LAGI GKPETFY+VP I F FE+ SYL+MLVLFC V+L+E D I E FY F AG++WREILEF DG+PAR+ + + + STR+ + + +P + G G NRMVS RY+ +DTWN LD +I +LVAF+FR+ L D FF+ AQFF A SAPLLF+RLL+LSQID TLGPM Q
Sbjct: 561 ISPLVGAAFSSNWILFRKVYDTYEEWTGHRWWRQQVLAQIPSGPPRRRSVLELQEMHDCEDDIPALIIRGAWSIPAVMWRDIVKAYQRAQLCSPDATSRGVPQPLRINPLPSWRDEFKGYSRRAVKEAAKRGTFRSLRDLVQEGFPLHEHHIPALLENIGDHEKDIIETILATVTNASNPFAMGAGLSRTLRTSEVDHPMHQLGLRRLQSIIDDFTMELLDKLPRTVRGMGMELIGGHQPITFGEGFHQGKHHRLGNLAGFIAVQWFLEPRVLLGDVAVENRYKEPDYIDPLRRALDRGSK-------------------------------------GLYKYDDFETYKLSEILSTPVKPPTANQEGEQSPAQKEGFISM----TFLLRLLQGWDHRDPKRRCNFPSRVFRAKGQEASGAQAXXXXXXXXXXXXXXPVSAAANAQAPASRPEPPNQWRIPHSTMLPGLQFSLAGIQGKPETFYKVPVIRFAFEIFSYLVMLVLFCFSVLLKEHDSIPWGEVTFYVFAAGLLWREILEFRDGMPARRHKPPKRQVSKNDGSTRTGSEQPLSFPRISRLGTGNRFNRMVSAFTRYVFYDTWNFLDTSTIGCILVAFIFRMIALD---------DKFFLFHAQFFYALSAPLLFSRLLVLSQIDATLGPMTQ 1180
BLAST of mRNA_F-serratus_M_contig1117.1079.1 vs. uniprot
Match: D8LH97_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH97_ECTSI) HSP 1 Score: 419 bits (1078), Expect = 1.120e-123 Identity = 265/648 (40.90%), Postives = 332/648 (51.23%), Query Frame = 3
Query: 1491 VTPLGAAALRSNWVLFRMLYDLYETLRKGRWSREEVLNQLPVKAPRAFSIENNQGMHEFRDDVDASLRSGAEGLSAVMWHDIVQAYQRATPEEPGGVKEDFPSWRGYFRDYSRRAVEVAIETMFFDDLKELVKEGFPLHDEQIPRLLENIEDHEQDVIDVVMYAVGNASNPLVMAAGVSKNVKTAEAESPTHRIGLRRLQNIVDEVTNELLNKLPHTVRGMGLTLLRPIVPEGRLSQIQQRRRDVLANLVGFIAVEWMLEPQLLVGSASDKKNYDGPNYVDPLQRAVDRDSEALQFVNKPLVLDYLHVKFNCGLPHWNSRKPDLASINEGFYTFYDFDRYALSML---------------SGKSSNTPKEKNVSPEAWDT------FLLRFLQGWNPDRDDATLDVQHNLEREKSGTRLMKSDVSNEEEGKGLPDRN--EFPRSTILPGLQFLLAGIIGKPETFYEVPAILFTFELLSYLIMLVLFCSCVILEESDHISRREWAFYFFGAGMVWREILEFLDGVPARQFRKGRNERRGASPSTRSTRRRRIKYPGSGKPGGKSLNRMVSGCARYILHDTWNLLDVLSIVFVLVAFVFRLKGLTRFGGLSKPGDDFFIAQFFLACSAPLLFARLLLLSQIDGTLGPMIQ 3365
++PL AA SNW+LF +YD Y TL K W R L +RAT ++ GG E+ SWR Y R YS RAV VA E F DL++LVKEGFPLHD+ IP LL +I DHEQD+I+ V++AV NASNP MAAGVS+ ++ A + P H+ GLRRLQ +D T E +WMLEP LLV + K Y GP Y DPLQ A+DR S+AL+F+ PLVLDY+HVKF LPHW+SR P +INEG Y + +F+ Y L+ L SG SS + N W + FLLRFLQGW+ R + D++ P TILPGLQF LAGI+GKPETF++VP I F +E+ SYL+MLVLFCS V+L+E D I R E FY F AG++WRE+LEFLDGVP R+ R S R+ R++ S G + NRMVS RY+ +DTWN +D +I + VAF+FR+ + RF D F AQFF A SAPLLF+RLL+LSQID TLGPM Q
Sbjct: 543 ISPLVGAAFSSNWILFWRVYDTYTTLAKKPWLRTNAL-------------------------------------------------RRATSDKSGG--EELMSWREYLRAYSSRAVHVASERGAFTDLRDLVKEGFPLHDDHIPALLVSIGDHEQDIIETVLFAVANASNPFGMAAGVSRFLRRARVDHPMHQRGLRRLQTRIDRFTLE----------------------------------------------QWMLEPSLLVEKINKAKKYRGPVYKDPLQSALDRGSDALEFLFSPLVLDYVHVKFAGTLPHWSSRNPFQPTINEGLYKYDNFEVYDLAKLLRGSKNDQATGRTAPSGASSASTGSTNRGSFLWRSPGSIMSFLLRFLQGWDHPRSN---------------------------------DQSVWSIPHLTILPGLQFSLAGILGKPETFFKVPVIRFVYEIFSYLVMLVLFCSSVLLKEPDFIPRDEVIFYIFAAGLLWREVLEFLDGVPTRRHR--------TSGGPRTEEGGRVEPGISHLGAGSNFNRMVSAFTRYVFYDTWNFMDTSTICCIFVAFIFRM--IARFDS----EFDLFYAQFFYALSAPLLFSRLLVLSQIDATLGPMTQ 1046
BLAST of mRNA_F-serratus_M_contig1117.1079.1 vs. uniprot
Match: D8LHA0_ECTSI (Transient Receptor Potential Channel. Partial sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA0_ECTSI) HSP 1 Score: 379 bits (972), Expect = 2.510e-106 Identity = 256/674 (37.98%), Postives = 344/674 (51.04%), Query Frame = 3
Query: 1488 AVTPLGAAALRSNWVLFRMLYDLYETLRKGRWSREEVLNQLPVKAPRAFSIENNQGMHEFRDDVDASLRSGAEGLSAVMWHDIVQAYQRATPEEPGGV------KEDFPSWRGYFRDYSRRAVEVAIETMFFDDLKELVKEGFPLHDEQIPRLLENIEDHEQDVIDVVMYAVGNASNPLVMAAGVSKNVKTAEAESPTHRIGLRRLQNIVDEVTNELLNKLPHTVRGMGLTLL---RPIV-PEGRLSQIQQRRRDVLANLVGFIAVEWMLEPQLLVGSASDKKNYDGPNYVDPLQRAVDRDSEALQFVNKPLVLDYLHVKFNCGLPHWNSRKPDLASINEGFYTFYDFDRYALSM--------LSGKSSNTPKEKNVSPEAWDT--FLLRFLQGWNPDRDDATL-------DVQHNLEREKSGTRLMKSDVSNEEEGKGLPDRNEFPR----------STILPGLQFLLAG-IIGKPETFYEVPAILFTFELLSYLIMLVLFCSCVILEESDHISRREWAFYFFGAGMVWREILEFLDGVPARQFRKGRNERRGASPSTRSTRRRRIKYPGSGKPGGKSLNRMVSGCA--------RYILHDTWNLLDVLSIVFVLVAFVFRLKGLTRFGGLSKPGDDFFI--AQFFLACSAPLLFARLLLLSQIDGTLGPMIQ 3365
+++PL A SNWVLFR +YD YE L W RE VL Q+P P S+ ++ +HE+ D++ + GA + AVMW DIV+AY+R P++ G + SWR F+ YSRR +VA + F L+ELV EGFPLHD+ +P LLENI DHE DVID ++ AV + SNP MAAGVS+ ++ ++ + P H GL RLQ+I+D+ T+++L +LP TVRGMG+ LL +PIV EG ++Q +R L NL GFI V+W+LEP LLVG + +K Y GP+Y+DPL+RA+DR SEAL F+N PLV DY+H+KF C LP W SR P ++NEGF+ + DFD Y LS L K + K E + T FLLRFLQGW D D+ L D++ ++ KS TR + +I+P G + G A + D + R+ L F D +R P ST +++ +G G V Y+ +DTWN LD +I +LV FVFR+ L DDFF+ AQFF A SAPLLF+RLL+LSQID TLGPM Q
Sbjct: 621 SISPLAGAVFSSNWVLFREVYDRYEKLAGCCWQRETVLKQIPQGPPHGRSVLKDEELHEYHDNIPPLITRGAWTIPAVMWPDIVKAYKRGEPDDREGYCCCGRQHQRLLSWRDDFKHYSRRGAKVAAKRGDFTALRELVNEGFPLHDDHMPFLLENIGDHEHDVIDTILAAVASTSNPFAMAAGVSRTLRMSKVDFPMHSEGLGRLQSIMDDFTSKVLEQLPQTVRGMGVALLGGHQPIVFGEG----LEQGKRHRLTNLAGFIVVQWILEPNLLVGKINTQKKYAGPDYLDPLRRALDRGSEALDFLNTPLVKDYVHIKFACTLPSWTSRNPFQPTVNEGFFKYDDFDTYPLSEVFSAPDENLGSKDEESRGLKAALKEQFLTKSFLLRFLQGW--DHRDSLLKWNIPIGDIRFASKKFKSDTRASNNXXXXXXXXXXXXXXXXXXXXXPGCCGGRFKSIIPSWLLCCNGNVSGNAXXXXXXNA---------------------RGDAHDSSAHXXXXXXXXXXXSSCRQPLWFND-----------KPKRWTIPH--STILPGLQFSLAGVLGKPETFYQVPAIRFVFEIFTYLYVFYDTWNFLDTSTIGCLLVTFVFRMIALD---------DDFFLFHAQFFYAASAPLLFSRLLVLSQIDATLGPMTQ 1245
BLAST of mRNA_F-serratus_M_contig1117.1079.1 vs. uniprot
Match: A0A6H5JTT3_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT3_9PHAE) HSP 1 Score: 296 bits (758), Expect = 3.390e-81 Identity = 193/459 (42.05%), Postives = 238/459 (51.85%), Query Frame = 3
Query: 2151 MGLTLLRPIVPEGRLSQIQQRRRDVLANLVGFIAV------------------------------EWMLEPQLLVGSASDKKNYDGPNYVDPLQRAVDRDSEALQFVNKPLVLDYLHVKFNCGLPHWNSRKPDLASINEGFYTFYDFDRYALSMLSGKSSN-----------TPKEKNVS-------------PEAWDTFLLRFLQGWNPDRDDATLDVQHNLEREKSGTRLMKSDVSNEEEGKGLPDRNEFPRSTILPGLQFLLAGIIGKPETFYEVPAILFTFELLSYLIMLVLFCSCVILEESDHISRREWAFYFFGAGMVWREILEFLDGVPARQFRKGRNERRGASPSTRSTRRRRIKYPGSGKPGGKSLNRMVSGCARYILHDTWNLLDVLSIVFVLVAFVFRLKGLTRFGGLSKPGDDFFIAQFFLACSAPLLFARLLLLSQIDGTLGPMIQ 3365
MG+ LL P + Q L NL GFIAV +WMLEP LLV + K Y GP Y DPLQ A+DR S+AL+F+ PLVLDY+HVKF LP W SR P +INEGF+ + DF+ Y L+ L S N TP S P ++ +FLLR LQGW+ R + ++ P TILPGLQF LAGI+GKPETF++VP I F +E SYL+MLVLFCS V+L+E D I R E FY F AG++WRE+LEFLDGVP R+ R R G P R+K S G + NRMVS RY+ +DTWN +D+ +I +LVAF+FR+ + RF D F AQFF A SAPLLF+RLL+LSQID TLGPM Q
Sbjct: 1 MGMDLLGGHQPISYGHGLHQGTIYRLGNLAGFIAVRKETRHAFMLDVPWTDHFPCVFDVSFLFLQQWMLEPSLLVEKINKAKKYRGPVYKDPLQSALDRGSDALEFLFSPLVLDYVHVKFAGTLPPWWSRNPFQPTINEGFFEYDDFEVYDLAKLLRGSGNDQAKGGNEPSGTPTASTGSTAGESLGSFLWQLPGSFMSFLLRVLQGWDHPRSNESVWYY-------------------------------VPHLTILPGLQFSLAGILGKPETFFKVPVIRFVYESFSYLVMLVLFCSSVLLKEPDFIPRDEVIFYIFAAGLLWREVLEFLDGVPTRRHRISR----GLGPEVGG----RVKPGISHLGAGSNFNRMVSAFTRYVFYDTWNFMDMSTICCILVAFIFRM--IARFDS----EFDLFYAQFFYALSAPLLFSRLLVLSQIDATLGPMTQ 414
BLAST of mRNA_F-serratus_M_contig1117.1079.1 vs. uniprot
Match: D7FMR2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR2_ECTSI) HSP 1 Score: 266 bits (681), Expect = 2.010e-69 Identity = 201/577 (34.84%), Postives = 283/577 (49.05%), Query Frame = 3
Query: 1863 FDDLKELVKEGFPLHDEQIPRLLENIEDHEQDVIDVVMYAVGNASNPLVMAAGVSKNVKTAEAESPTHRIGLRRLQNIVDEVTNELLNKLPHTVRGMGLTLLRPIV---------PEGRLSQIQQ----RRRDVLANLVGFIAV-------EW-------MLEPQLLVGSASDKKNYDGPNYV-------------------DPLQRAVDRDSEALQFVNKPLVLDYLHVKFNCGLPHWNSRKPDLASINEGFYTFYDFDRYALSMLSGKSSNTPKEKNVSPEAWDTFL-----------LRFLQGWNPDRDDATLDVQHNLEREKSGTRLMKSDVSNEEEGKGLPDRNEFPRSTILPGLQFLLAGIIGKPETFYEVPAILFTFELLSYLIMLVLFCSCVILEESDHISRREWAFYFFGAGMVWREILEFLDGVPARQFRKGRNERRGASPSTRSTRRRRIKYPGSGKP-----------GGKSLNRMVSGCARYILHDTWNLLDVLSIVFVLVAFVFRL--------KGLTRFGGLSKPGDDFFIAQFFLACSAPLLFARLLLLSQIDGTLGPMIQ 3365
FD L+ L+++G+ H + L+ +I D E+ VI VM AV N+SNP V +A S + + R+GL RLQ +D+ T ELL KLP TV+G+GL L+ P+G + RR++++AN VG+IAV +W + + + A D+K + + + DPLQ+A+ + S+A F+N PLVLDYL +K+ C P+ + R P +INEGF T+ SG T EK V + DTFL LR LQGW+ + TR+++ + G FP +T+LPG QFLLAG++GKP F+ VP + F FE SYL+ML L+ S V ++ SD I E FY F AG+++REILEF D +P +SPS + + GS +P G S R+ SG RY D WN+LD SI V++AF+FR+ + T G + G FFIA+F LA APLLFAR+L L+Q+D T GPM Q
Sbjct: 949 FDGLRALIEKGWNCH-AHLATLIGDIGDAEEQVIATVMCAVENSSNPFVTSAIASVCMAKHGRDCSKDRLGLARLQEEIDQFTTELLGKLPQTVKGVGLELISSFEQPDLGKNDEPDGEEEPATEAELARRKNIMANHVGYIAVVVHCLILDWEGGGIKDIKQIAIASQQALDEKAFALCSVLGACVSWLVSKMISATLQDLDPLQQALTKGSDAHDFINAPLVLDYLELKWKCTTPNLDRRNPLDYTINEGFSTY----------RSGNGKYTLPEKGV--DIGDTFLERGGTTAEESLLRLLQGWD-----------------RGPTRVLRFKEKHLLHG--------FPHTTVLPGTQFLLAGLLGKPTDFFLVPFVRFMFETFSYLVMLGLYWSSVAIQYSDIIPADEILFYLFAAGLLFREILEFRDALPPSVSSSSSPT---SSPSDATMSSDDGEDHGSSEPDSLAARAREERSGLSQRRVTSGLRRYFSKDNWNILDTASIFCVMLAFIFRIIAYIADFAQAATTILGNTLIGQAFFIARFSLAAIAPLLFARVLSLAQVDNTFGPMTQ 1484
BLAST of mRNA_F-serratus_M_contig1117.1079.1 vs. uniprot
Match: A0A6H5K4M1_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M1_9PHAE) HSP 1 Score: 245 bits (625), Expect = 4.830e-64 Identity = 187/570 (32.81%), Postives = 253/570 (44.39%), Query Frame = 3
Query: 1782 KEDFPSWRGYFRDYSRRAVEVAIETMFFDDLKELVKEGFPLHDEQIPRLLENIEDHEQDVIDVVMYAVGNASNPLVMAAGVSKNVKTAEAESPTHRIGLRRLQNIVDEVTNEL------------------------LNKLPHTVRGMGLTLLRPIVPEGRLSQIQQRRRDVLANLVGFIAVEWMLEPQLLV---GSASDKK-----NYDGPNYVDPLQRAVDRDSEALQFVNKPLVLDYLHVKFNCGLPHWNSRKPDLASINEGFYTFYDFDRYALSMLSGKSSNTP---KEKNVSPEAWDTFL----LRFLQGWNPDRDDATLDVQHNLEREKSGTRLMKSDVSNEEEGKGLPDRNEFPRSTILPGLQFLLAGIIGKPETFYEVPAILFTFELLSYLIMLVLFCSCVILEESDHISRREWAFYFFGAGMVWREILEFLDGVPARQFRKGRNERRGASPSTRSTRRRRIKYPGSGKPGGKS-LNRMVSGCARYILHDTWNLLDVLSIVFVLVAFVFRLKGLTRFGGLSKPGDDFFI--AQFFLACSAPLLFARLLLLSQIDGTLGPMIQ 3365
K PSWRG F+ YSRRAV KE K G + SNP M AG+S+ ++T+E + P H++GLRRLQ+I+D+ T E L + P VRGMG L+ P Q + L NL GFIAV + E +++ G ++K+ Y P+Y+DPL+R +DR S+ L VN PLV DY+HVKF LPHW SR P +NEG Y + DF+ Y LS + P +E SP F+ L L P VQ + + +N+ P ST+ PGLQF LAGI GKP TFY+ G++WREILEF +GVPAR+ + + + +TR+ + + P +PG ++ NR+VS + +DTW LD +I +LVAF+FR+ L D FF+ A+FF A SAP LF+RLL+LSQID TLGPM Q
Sbjct: 51 KNPLPSWRGEFKGYSRRAV------------KEAAKRG----------------------------TSRSLSNPFAMGAGLSRTLRTSEVDHPMHQLGLRRLQSIIDDFTKEACESIKSPRLVLNVPRGVSVSQRAALGQAPTPVRGMGTELIGGHQPITFGEGFHQGKHHRLGNLAGFIAVA-LSESRIVATNTGRVANKRVTSHSRYKEPDYIDPLRRVLDRGSKGLDMVNSPLVRDYVHVKFTGTLPHWTSRNPFQPIVNEGLYKYDDFETYGLSEILSTPVKPPTANQEGEHSPAQKQGFISMTFLLTLPSQAPTPPMPVPPVQPVSATTNAQAPACRQKPTNQ---------RRIPHSTMPPGLQFSLAGIQGKPHTFYK--------------------------------------------GLLWREILEFRNGVPARRHKPPKRQVPKNEDNTRAGSEQSLSSPRISRPGTRNRFNRIVSTFTWNVFYDTWKFLDTPTIGCILVAFIFRVTTLD---------DKFFLFHARFFYALSAPRLFSRLLVLSQIDATLGPMTQ 517
BLAST of mRNA_F-serratus_M_contig1117.1079.1 vs. uniprot
Match: D7FNX3_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX3_ECTSI) HSP 1 Score: 204 bits (520), Expect = 1.170e-51 Identity = 156/469 (33.26%), Postives = 227/469 (48.40%), Query Frame = 1
Query: 1 IRSQCGVCALVKELRELDVNGASLLFLAASSRTTSTCFVEVFQVLRAFLGMAGLSEQIEADDHCGRNIMMYAARGKHAETFARVRDLY----KTAFIQVERFAEKWCDRVQKVXXXXXXXXXXXXXXXXXXXXXLVFKMARE---DGIEVHDRMALPDMSERTPIMLFLRSKHGSCDSCEGDSNTKMHRLWLHAPREGWMQQRMVPPVWKLTGNDQGGGDGEEFITLARTELFHAARGGPARLDLTLEYIKRQQKRLRTPNSNEVYLDKVLGMAICSTTPPHGEGQEGLHHELREFLKTPAGRKRLAKSRRETPESEEELRKTVRHWGYGMLLAASVKGGHEEVIKRVVSAIEVGRFLDETETRGGERDSAA--------VVSAINAIKDSGRSLFALAIMSGKPGAAKFVYRNIMLKYFQDQPNEVWDLLLGPRGENSPLTFAASAPMTAERNGVDMLHTVYFCLHQA 1362
IR Q G ALVK+LR D+NGA LLFLAASSR++ CF V L A LG GL EQ+ A D GR ++MYAARG E F RV ++Y +T E + KV V + R D +H PD + TP+ LR+K+G + + + K +LWLH+ + +M R V P+ G +A TEL HAARGG L L L I+ + + P+S V +++ L + + +G++G +TP E + WG+GMLLAA+ KGGH +V++ VV AI+ G F+++ R ++ A V AI AI SG SLF LA++SGK A +VY+ + Q P+++W+ + G +G+ SPLT A+S+ M +E +G ++L VY CL ++
Sbjct: 93 IRDQLGFNALVKQLRARDINGAPLLFLAASSRSSENCFQTVHDALSAVLGRGGLVEQVAARDGMGRTVVMYAARGNDVEVFHRVWNMYHHHQRTFSAAGEGLGGSPSGALTKVDHTERNVLHHAAEAGCLDVLCEVLLLVRRISGDSKTMHK----PDKNGLTPLHHVLRAKYGEPEGRD-EIRPKFEKLWLHSNKGSFMVPRRVMPM-PCVGRTG-------VAVMAVTELIHAARGGLPSLKLVLAKIRLMKFWRKKPDSAVVTVNEALRVTV--------DGKKGDE---------------------DTPGQGE-----LDAWGWGMLLAAAAKGGHVDVLETVVHAIKTGSFVEDVSERAADQGQATNTCQELEPVDRAIEAILSSGSSLFGLAVLSGKVEAVLWVYQFLA----QRCPHQLWENVRGAQGKISPLTCASSSSMKSESHGTEILVAVYTCLRES 510
BLAST of mRNA_F-serratus_M_contig1117.1079.1 vs. uniprot
Match: A0A6H5JNN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN7_9PHAE) HSP 1 Score: 125 bits (313), Expect = 9.400e-26 Identity = 144/490 (29.39%), Postives = 194/490 (39.59%), Query Frame = 1
Query: 1 IRSQCGVCALVKELRELDVNGASLLFLAASSRTTSTCFVEVFQVLRAFLGMAGLSEQIEADDHCGRNIMMYAARGKHAETFARVRDLYKTAFIQVERFAEKWCDRVQKVXXXXXXXXXXXXXXXXXXXXXLVFKMAREDGIEVHDRMALPDMSERTPIMLFLRSKHGSCDSCEGDSNTKMHRLWL--------------------HAPREGWMQQRMVPPVWKLTGNDQGGGDGEEFITLAR--TELFHAARGGPARLDLTLEYIKRQQKRLRTPNSNEVYLDKVLGMAIC---STTPPHGEGQEGLHHELREFLKTPAGRKRLAKSRRETPESEEELRKTVRHWGYGMLLAASVKGGHEEVIKRVVSAIEVGRFLDETET-----------RGGERDSAAVVSAINAIKDSGRSLFALAIMSGKPGAAKFVYRNIMLKYFQDQPNEVW------DLLLGPRGENSPLTFAASAPMTAERNGVDMLHTVY 1344
IRS+ GV AL KELRELD++ A LLF AA+SR ++CF ++ LG GL EQ+EA D GR ++M+AAR F + +Y A D K ++ K + G +R D + RTP+M L + D GDS K L HA +EGWM+ V LT Q E AR TEL HAARGG L+L L RL + LD L + C ++ P E Q PA WG G+LLAA+ + G +V+ V++AI+ G F + R G V + + + G+SLF+ AI+SG+ A + VY +++K F + E W DLL G E SPL AASA M +G M VY
Sbjct: 93 IRSKIGVRALAKELRELDIDRAPLLFNAAASRGETSCFRTAHDLVYKALGKGGLIEQLEAVDGEGRTMLMHAARSNDGNAFDEIVGIYSKAVPLTSS------DYTAKDRKGMNCLHHAAEAGCSEVLGKVIKKYSDAGGSSYAER----DNNNRTPVMYVLSD--ATRDVRAGDSLLKKFTLLYSNMPTTCGKQDEKVSVDPGEHA-KEGWMEMTDV-----LTQRIQIS-KSHEITRKARGVTELMHAARGGLGSLELALNE-PLPSSRLA---DGSISLDIALNVKACDEAASDKPRWEPQ-------------PA-------------------------WGKGLLLAAAAERGDIDVLHIVLTAIQDGVFTKKPNADRFTLRRHEGRRAGLPFGENVKTVVREMSKGGKSLFSQAILSGRTVAVEHVYL-LIVKLFGETDPETWAILTGIDLLSGKVAEASPLACAASASMEPSDHGSKMFDLVY 520 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1117.1079.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1117.1079.1 >prot_F-serratus_M_contig1117.1079.1 ID=prot_F-serratus_M_contig1117.1079.1|Name=mRNA_F-serratus_M_contig1117.1079.1|organism=Fucus serratus male|type=polypeptide|length=672bp MTASKMTKSSSDDEMLELLRLRSTLKRAGRSSDLRSNMFSAKAVTPLGAAback to top mRNA from alignment at F-serratus_M_contig1117:116385..124600- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1117.1079.1 ID=mRNA_F-serratus_M_contig1117.1079.1|Name=mRNA_F-serratus_M_contig1117.1079.1|organism=Fucus serratus male|type=mRNA|length=8216bp|location=Sequence derived from alignment at F-serratus_M_contig1117:116385..124600- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1117:116385..124600- >mRNA_F-serratus_M_contig1117.1079.1 ID=mRNA_F-serratus_M_contig1117.1079.1|Name=mRNA_F-serratus_M_contig1117.1079.1|organism=Fucus serratus male|type=CDS|length=4032bp|location=Sequence derived from alignment at F-serratus_M_contig1117:116385..124600- (Fucus serratus male)back to top |