mRNA_F-serratus_M_contig1117.1078.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1117.1078.1
Unique NamemRNA_F-serratus_M_contig1117.1078.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1117.1078.1 vs. uniprot
Match: D7FNX2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX2_ECTSI)

HSP 1 Score: 377 bits (968), Expect = 3.080e-123
Identity = 204/391 (52.17%), Postives = 256/391 (65.47%), Query Frame = 1
Query:    1 ILWRLMSHTLRFSAFIVVVLTSYALAFHAIFATCGEGSVLDEKFGTFAAALLSVFGAALGEFGDILDAFADAEEYCAENPAPRLLESAGVVLLSTYLVIMAVVLLNLLIAVLSSEHQKVSSKGEMEFHLARTRLILQNSLAVVHRRIPAPFNLILAGIGFLFDGVQECLWQYKNKNG------ERTKFTPATSTYGWFTFEGFLQRGAFALTMGVAALALSALLWIISLPWIAWSLLRW--FRPWDQPRGDEGEEASSNERQGHFRTFFFTLFRACAWILALAFAVFMCALCCIGSIILWARGLWGIAEWSCWRLTEEGRAVSGEAESSCPTAMPGQERGDHWRHAWS-VVQARNYRIRQESGSVHFHVAPLLKSTKGLDMKRLVMLVKKR 1146
            I+WR+MS TLRF  FIVVV+  +ALAF  +F +C   S+L E FG+F  A LSVF A LGEF    + F D    C +NPAP     AG  LL  YLV++AVV+LNLL+AVL++ H +V++ GE EFHLARTRLILQ++ AV HRRIP P NL+   +G L D V E  W  +   G      E   F P T+TYGW TF+G LQR  F LTMG+ A+AL++LLW++SLPW+AW L+ W  +   ++   DE EE ++  ++G  R     L    A  LAL FA  +C  C +GS  LW RG+W + EW  WR +EEG+ VSGE +  CPTAMPGQE G +WRHAW  V +ARN RIR E GS HFHVAPLL+ST GLDMKRL  L KK+
Sbjct:    4 IIWRMMSQTLRFGVFIVVVMAGFALAFTTVFGSCNADSLLGESFGSFGTAFLSVFEAPLGEFS--FEDFHDVGTQCPDNPAPGRASDAGTFLLVAYLVVLAVVMLNLLVAVLTTAHGEVNANGEKEFHLARTRLILQSARAVAHRRIPPPLNLVQLIVGLLLDTVGELAWWVRLDAGRCKLRQEGEGFVPITATYGWHTFDGTLQRLFFVLTMGLVAVALNSLLWVLSLPWVAWRLVCWVSYEFANEGDDDEDEETNAPVKRGKLRESLLALGTIAACWLALLFAAALCGACIVGSFFLWFRGVWNVWEWVRWRRSEEGKFVSGETDQECPTAMPGQEHGQNWRHAWQHVAKARNLRIRHEHGSEHFHVAPLLQSTTGLDMKRLCSLAKKK 392          
BLAST of mRNA_F-serratus_M_contig1117.1078.1 vs. uniprot
Match: A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE)

HSP 1 Score: 373 bits (957), Expect = 1.170e-113
Identity = 204/395 (51.65%), Postives = 266/395 (67.34%), Query Frame = 1
Query:    1 ILWRLMSHTLRFSAFIVVVLTSYALAFHAIFATCGEGSVLDEKFGTFAAALLSVFGAALGEFGDILDAFADAEEYCAENPAPRLLESAGVVLLSTYLVIMAVVLLNLLIAVLSSEHQKVSSKGEMEFHLARTRLILQNSLAVVHRRIPAPFNLILAGIGFLFDGVQECLW---QYKNKNGERT---KFTPATSTYGWFTFEGFLQRGAFALTMGVAALALSALLWIISLPWIAWSLLRW--FRPWDQPRGDEGEEASS---NERQGHFRTFFFTLFRACAWILALAFAVFMCALCCIGSIILWARGLWGIAEWSCWRLTEEGRAVSGEAES-SCPTAMPGQERGDHWRHAWS-VVQARNYRIRQESGSVHFHVAPLLKSTKGLDMKRLVMLVKKR 1146
            I+WR++S TLRF  FIVVV+  +ALAF+A+F +C  GS LDE +G+F  A L+VF A LGEF    + F D    C  NP+P     AG  LL  YLV++AVV+LNLLIAVLS+ H +V + GE EFHLARTRLILQ++ AV HRRIP PFNL+   +GFL DGV E  W   +  ++ G R     F P T TYGW TF+G LQR  FA TMG+ A+ L+ALLW++SLPW+AW ++ W  ++  +    DE E   S    +++G FR F +      A + AL FAV +C +C  GS +LW RG+  + EW+ WRL+EEGR VSGE +  +CPTAMPGQERG +WRHAW  V +ARN+RIR E  S HFHVAPLL++T GLDM++  +L K++
Sbjct: 1177 IIWRMLSQTLRFGVFIVVVMAGFALAFNAVFGSCDAGSDLDESYGSFGTAFLTVFKAPLGEFK--FEDFDDVGGQCPYNPSPGRASDAGTFLLVAYLVVLAVVMLNLLIAVLSTAHGEVYANGEKEFHLARTRLILQSARAVAHRRIPPPFNLVQLVVGFLLDGVSELAWWAVRGADRCGLRQHKESFAPITYTYGWHTFDGMLQRLLFASTMGLVAVTLNALLWVLSLPWVAWRIVCWVLYKVVETGDPDEVETFLSVRLRDKKGKFRAFLWVFLGIIACVFALGFAVALCGVCVAGSFVLWLRGVCNVFEWAHWRLSEEGRFVSGETKKGTCPTAMPGQERGSNWRHAWKYVAKARNFRIRHEHDSEHFHVAPLLQATTGLDMEQFCLLAKEK 1569          
BLAST of mRNA_F-serratus_M_contig1117.1078.1 vs. uniprot
Match: D8LHA0_ECTSI (Transient Receptor Potential Channel. Partial sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA0_ECTSI)

HSP 1 Score: 253 bits (647), Expect = 1.280e-71
Identity = 172/465 (36.99%), Postives = 230/465 (49.46%), Query Frame = 1
Query:    1 ILWRLMSHTLRFSAFIVVVLTSYALAFHAIFATCGEGS------------VLDEKFGTFAAALLSVFGAALGEFGDILDAFADAEEYCAENPAPRLLESAGVVLLSTYLVIMAVVLLNLLIAVLSSEHQKVSSKGEMEFHLARTRLILQNSLAVVHRRIPAPFNLILAGIGFLFDGVQECL----WQYKNKNGERTKFTPA--------------------------------------------------TSTYGWFTFEGFLQRGAFALTMGVAALALSALLWIISLPWIAWSLLRWFRPWDQPRGD--EGEEASSNE---------------RQGHFRTFFFTLFRACAWILALAFAVFMCALCCIGSIILWARGLWGIAEWSCWRLTEEGRAVSGEAESSCPTAMPGQERGDHWRHAWSVVQARNYRIRQESGSVHFHVAPLLKSTKGLDMKRLVMLVKKR 1146
            ++WR++S TLRFSAFI VV+ S+ALAFHA+F TCGE               L + FGTF  + ++VF AALG  G   + +  A   C     P   + AG+ L+  Y+VIMAVVLLNLLIAVLS+ H KV   G+ EFHLAR +LI Q++  V  RR P P NL+   +G L D   E +    W  +N   +  +  PA                                                  T T+ W TFEG +QR  FA T G AA+ +SA+LW +S+PW+AW LLR   P  + R +  E EE  +N+                 G+FR  F T   +   ++A A A  +CAL  + S++LW  GL  I +W     T E         +  P AMPGQE GDHW+ AW +V  RN+ +R++    HF+V P LKS  GLD + L  L K R
Sbjct: 1246 VIWRMISDTLRFSAFISVVMLSFALAFHAVFHTCGEFEDPTCNTNDDPDFPLRDAFGTFGRSFVTVFSAALG--GPDFELYEAAGSEC-RCKLPDGAQEAGIFLMVVYMVIMAVVLLNLLIAVLSTAHSKVYDNGDKEFHLARAKLIYQSARVVTRRRPPPPLNLVKVVLGTLIDATTEPVRFRRWMVRNPPEDENEANPADGAXXXXXXXXGHENDAVEGEAEGDQGNIGGGSPGDCPIAGTPGDEFIAWTQTHEWRTFEGGVQRVLFAFTFGAAAIVMSAILWTLSVPWVAWCLLRLAHPVVEKRAENLEDEEDDTNQGLGDIEEEEEMKEKVHPGYFRRIFITFLWSAVLVVATAVAAILCALYILFSVVLWFVGLHMIYKWVRTNWTPES--------NDRPRAMPGQEEGDHWQRAWDLVSLRNHGVREDFDQAHFNVLPFLKSKTGLDRQHLAWLTKAR 1699          
BLAST of mRNA_F-serratus_M_contig1117.1078.1 vs. uniprot
Match: D8LH99_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH99_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 1.700e-67
Identity = 164/426 (38.50%), Postives = 215/426 (50.47%), Query Frame = 1
Query:    1 ILWRLMSHTLRFSAFIVVVLTSYALAFHAIFATCGEGSV------------LDEKFGTFAAALLSVFGAALGEFGDILDAFADAEEYCAENPAPRLLESAGVVLLSTYLVIMAVVLLNLLIAVLSSEHQKVSSKGEMEFHLARTRLILQNSLAVVHRRIPAPFNLILAGIGFLFDGVQEC----LWQYKNKNGERTKFTPATSTYGWFTFEGFLQRGAFALTMGVAALALSALLWIISLPWIAWSLLRWFRPWDQPRG------------------DEGEEA----------SSNERQGHFRTFFFTLFRACAWILALAFAVFMCALCCIGSIILWARGLWGIAEWSCWRLTEEGRAVSGEAESSCPTAMPGQERGDHWRHAWSVVQARNYRIRQESGSVHFHVAPLLKSTKGLDMKRLVMLVKKR 1146
            ++WR+MSHTLRFSAFI +V+ S+ALAFHA+F TCGE S             L + FGTF  + ++VF  ALG  G   +AF  A   C  +  P    +AG+ LL  Y++ M VVLLNLLIAVLS+ H KV +  E EFH AR RLI Q++  V   R P P NLI    G L D   E     +W  + ++  R    P ++T+ W T EG LQR  FA T GVAA+ LS +LWI+S+PW+AW L R     ++                     D+G                   G+FR F   +   C+ ++A+  A F+C L    ++ILWA G+                    +     P  MPGQE G HW+ AW +   RN   R   G  HFH+APLLKS  GLDM+ L  L K R
Sbjct: 1181 VIWRMMSHTLRFSAFIAMVMLSFALAFHAVFHTCGEYSEPQCTLDDDDAFPLRDAFGTFGDSFVTVFTYALG--GPDFEAFQLAGSDCRCD-LPEGARNAGIFLLVVYMITMTVVLLNLLIAVLSTTHGKVYANAEKEFHHARARLIYQSARVVSRSRPPPPLNLIKLVCGILLDAGTEVWRVGVWVTRGRSQARM-LKPFSTTHQWKTLEGGLQRLEFAFTFGVAAVGLSTILWIVSVPWVAWCLHRLVHKAEEETXXXXXXXXXXXXXXXXXERDDGXXXXXXXXXXXXXKEKPHLGYFRRFLSGIKSMCSLLVAMVAASFLCLLYIFATMILWAVGIXXXXX--------XXXXXXDKKNGDMPEPMPGQEDGHHWKRAWELASLRNQGARANRGQAHFHIAPLLKSKTGLDMQHLAQLTKNR 1594          
BLAST of mRNA_F-serratus_M_contig1117.1078.1 vs. uniprot
Match: A0A6H5K4M1_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M1_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 4.590e-46
Identity = 147/387 (37.98%), Postives = 184/387 (47.55%), Query Frame = 1
Query:    1 ILWRLMSHTLRFSAFIVVVLTSYALAFHAIFATCGEGSVLDEKFGTFAAALLSVFGAALGEFGD-ILDAFADAEEYCAENPAPRLLESAGVVLLSTYLVIMAVVLLNLLIAVLSSEHQKVSSKGEMEFHLARTRLILQNSLAVVHRRIPAPFNLILAGIGFLFDGVQECLWQ----YKNKNGERTKFTPATSTYGWFTFEGFLQRGAFALTMGVAALALSALLWIISLPWIAWSLLRWFRPWDQPRGDEGEEASSNERQGHFRTFFFTLFRACAWILALAFAVFMCALCCIGSIILWARGLWGIAEWSCWRLTEEGRAVSGEAESSCPTAMPGQERGDHWRHAWSVVQARNYRIRQESGSVHFHVAPLLKSTKGLDMKRLVMLVKKR 1146
            ++WR+MSHTLRFSAFI +V+ S+ALAFHA+F TCGE     E   TF          A G FGD  +  F D    C  N  P    +AG+ LL  Y+V M VVLL LLIAVLS+ H KV    E EFH AR   I Q++  V   R P P NLI    G L D     LW+    ++    +     P ++++   T EG LQR  FA T GVAA+ LSA+LWI+S+PW+   L              GE AS        +T F  +    + ++A+  A F+C L    ++ILWA G+W I  W        G      AES                           R R      HF VAPLLKS  GLDMK L  L K R
Sbjct:  518 VIWRMMSHTLRFSAFIAMVMLSFALAFHAVFHTCGEHI---EPQCTFDDDDAFPIRDAFGTFGDSFVTVFTD----CRCN-LPEGARNAGIFLLVVYMVTMTVVLLKLLIAVLSTTHGKVYDNAEKEFHHARACFIYQSARVVSRSRPPPPLNLIKLVCGILLDA-GTMLWRAGAWFRRGRSQAKMLKPFSTSHQRKTLEGGLQRLEFAFTFGVAAVGLSAILWIVSVPWVDSCLHCLVHK-------AGEAAS-----WLLQTIFSGIRSMFSLLIAMVAASFLCVLYVFATMILWAVGIWMIVTW--------GLGACQPAES---------------------------RARANRAQAHFRVAPLLKSKTGLDMKHLAQLTKNR 848          
BLAST of mRNA_F-serratus_M_contig1117.1078.1 vs. uniprot
Match: D8LH97_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH97_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 1.030e-35
Identity = 90/184 (48.91%), Postives = 117/184 (63.59%), Query Frame = 1
Query:    1 ILWRLMSHTLRFSAFIVVVLTSYALAFHAIFATCGEGSV------------LDEKFGTFAAALLSVFGAALGEFGDILDAFADAEEYCAENPAPRLLESAGVVLLSTYLVIMAVVLLNLLIAVLSSEHQKVSSKGEMEFHLARTRLILQNSLAVVHRRIPAPFNLILAGIGFLFDGVQECLWQY 516
            ++WR+MSH LRFSAFI +V+ S+ALAFHA+F TCGE S             L + FGTF  +LL+VF +ALG  G   D F DA   C  N  PR   SAG+ ++  Y + M+VVLLNLLIAVLS+ H +V    E EFHLAR RL++Q++ +V HRR P P NL+  G G L D   E +W++
Sbjct: 1047 VIWRMMSHMLRFSAFIAMVMLSFALAFHAVFHTCGEHSEPQCTLDDDDAFPLRDAFGTFGDSLLTVFSSALG--GPEFDLFDDAGSDCRCN-LPRGARSAGISMMVVYTITMSVVLLNLLIAVLSTAHDEVYVNAEKEFHLARARLVVQSARSVAHRRPPPPLNLVKLGFGVLIDVFTE-IWRF 1226          
BLAST of mRNA_F-serratus_M_contig1117.1078.1 vs. uniprot
Match: A0A6H5JTT3_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT3_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 1.600e-33
Identity = 87/184 (47.28%), Postives = 115/184 (62.50%), Query Frame = 1
Query:    1 ILWRLMSHTLRFSAFIVVVLTSYALAFHAIFATCGEGSV------------LDEKFGTFAAALLSVFGAALGEFGDILDAFADAEEYCAENPAPRLLESAGVVLLSTYLVIMAVVLLNLLIAVLSSEHQKVSSKGEMEFHLARTRLILQNSLAVVHRRIPAPFNLILAGIGFLFDGVQECLWQY 516
            ++WR+MSH LRFSAFI +V+ S+ALAFHA+F TCGE S             L + FGTF  + ++VF +ALG  G  +D F D    C  N  PR   SAG+ ++  Y + M+VVLLNLLIAVLS+ H +V    E EFHLAR RL++Q++ +V H R P P NLI  G G L D   E +W++
Sbjct:  415 VIWRMMSHMLRFSAFIAMVMLSFALAFHAVFHTCGEYSEPQCTLDDDDPFPLRDAFGTFGDSFVTVFSSALG--GPEIDLFDDVGSDCRCN-LPRGARSAGISMMVVYTITMSVVLLNLLIAVLSTAHDEVYVNAEKEFHLARARLVVQSAQSVAHLRPPPPLNLIKLGFGVLIDLFTE-IWRF 594          
BLAST of mRNA_F-serratus_M_contig1117.1078.1 vs. uniprot
Match: D8LH98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH98_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 1.570e-27
Identity = 75/209 (35.89%), Postives = 101/209 (48.33%), Query Frame = 1
Query:  571 WFTFEGFLQRGAFALTMGVAALALSALLWIISLPWIAWSLLRWFRPWDQPRGDEG------------------------EEASSNERQGHFRTFFFTLFRACAWILALAFAVFMCALCCIGSIILWARGLWGIAEWSCWRLTEEGRAVSGEAESSCPTAMPGQERGDHWRHAWSVVQARNYRIRQESGSVHFHVAPLLKSTKGLDMKRL 1125
            W   EGFLQR AFA TMG A+L +  +LWI S+PW+AW  LR   P +   G+EG                         E  +N   G+ R   + +      ++++AFA   C L  +GS ILW  G + +  W  W      R      +   P AMPGQE G HW +AW +   RN+ IR++    HF+V P LKS  GLDM+ L
Sbjct:  252 WIAVEGFLQRLAFAFTMGGASLVVFTMLWIFSVPWVAWCFLRSLLPPED--GEEGFHLDTIKMIKTCSCWKGGKGVNIRSEEENNSSPGYVRELLWVVCALVVMMVSMAFAAVFCLLYIVGSGILWILGTFRLLVWG-WNNCSRKR------DDKNPEAMPGQEDGSHWENAWKLANLRNHGIREDREHPHFYVVPFLKSKTGLDMQHL 451          
BLAST of mRNA_F-serratus_M_contig1117.1078.1 vs. uniprot
Match: D7FX79_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX79_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 8.470e-23
Identity = 62/116 (53.45%), Postives = 80/116 (68.97%), Query Frame = 1
Query:    1 ILWRLMSHTLRFSAFIVVVLTSYALAFHAIFATCGEGSVLDEKFGTFAAALLSVFGAALGEFGDILDAFADAEEYCAENPAPRLLESAGVVLLSTYLVIMAVVLLNLLIAVLSSEH 348
            I+WR++S TLRF  FIVVV+  +ALAF+A+F +C  GS LDE +G+F  ALL+VF A LGEF    + F D    C  NP+P     AG  LL  YL+++AVV+LNLLIAVLS+ H
Sbjct: 1175 IIWRMLSQTLRFGVFIVVVMAGFALAFNAVFGSCDAGSGLDESYGSFGTALLTVFKAPLGEFK--FEDFDDVGGQCPYNPSPGRASDAGTFLLVAYLIVLAVVMLNLLIAVLSTAH 1288          
BLAST of mRNA_F-serratus_M_contig1117.1078.1 vs. uniprot
Match: D7FMR2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR2_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 7.300e-22
Identity = 68/177 (38.42%), Postives = 103/177 (58.19%), Query Frame = 1
Query:    1 ILWRLMSHTLRFSAFIVVVLTSYALAFHAIFA--TCGEGSVLDEKFGTFAAALLSVFGAALGEFGDILDAFADAEEYCAENPAPRLLESAGVVLLSTYLVIMAVVLLNLLIAVLSSEHQKVSSKGEMEFHLARTRLILQNSLAVVHRRIPAPFNLILAGIGFLFDGVQE-CLWQYKN 522
            I+W ++ H  RFS F++VV+ S+ALAFH++++   C EG  L E + T   +LL +F + LG+     D F          P+      AG+ LL+ Y+V+ A+++LNLLIAVLS+ H  VS     EFHLAR++ I  ++ +V   R+P P NL++A I  + D   E C W  K+
Sbjct: 1485 IIWNMLFHLARFSVFMLVVMVSFALAFHSLYSDPNCSEGDELFESYRTLRESLLDMFRSMLGDAN--FDRFEADRNLTCTGPSWEF--DAGITLLTIYIVLQAILMLNLLIAVLSTVHDTVSENAITEFHLARSQFIQASAASVEGGRLPPPLNLLMAAILIVVDVFGEICHWVGKS 1657          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1117.1078.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D7FNX2_ECTSI3.080e-12352.17Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JB40_9PHAE1.170e-11351.65Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D8LHA0_ECTSI1.280e-7136.99Transient Receptor Potential Channel. Partial sequ... [more]
D8LH99_ECTSI1.700e-6738.50Ankyrin Repeat Transient Receptor Potential Channe... [more]
A0A6H5K4M1_9PHAE4.590e-4637.98Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D8LH97_ECTSI1.030e-3548.91Ankyrin Repeat Transient Receptor Potential Channe... [more]
A0A6H5JTT3_9PHAE1.600e-3347.28Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D8LH98_ECTSI1.570e-2735.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FX79_ECTSI8.470e-2353.45Ankyrin Repeat Transient Receptor Potential Channe... [more]
D7FMR2_ECTSI7.300e-2238.42Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1117contigF-serratus_M_contig1117:113235..115797 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score246.1
Seed ortholog evalue2.6e-62
Seed eggNOG ortholog2880.D8LHA0
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.calcium ion transmembrane transport
EggNOG OGsKOG3676@1,KOG3676@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1146
Cds size1131
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1117.1078.1prot_F-serratus_M_contig1117.1078.1Fucus serratus malepolypeptideF-serratus_M_contig1117 113235..115782 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929002.7136786-CDS-F-serratus_M_contig1117:113234..1136571622929002.7136786-CDS-F-serratus_M_contig1117:113234..113657Fucus serratus maleCDSF-serratus_M_contig1117 113235..113657 -
1690962664.3613143-CDS-F-serratus_M_contig1117:113234..1136571690962664.3613143-CDS-F-serratus_M_contig1117:113234..113657Fucus serratus maleCDSF-serratus_M_contig1117 113235..113657 -
1622929002.7300313-CDS-F-serratus_M_contig1117:113955..1141511622929002.7300313-CDS-F-serratus_M_contig1117:113955..114151Fucus serratus maleCDSF-serratus_M_contig1117 113956..114151 -
1690962664.3730876-CDS-F-serratus_M_contig1117:113955..1141511690962664.3730876-CDS-F-serratus_M_contig1117:113955..114151Fucus serratus maleCDSF-serratus_M_contig1117 113956..114151 -
1622929002.7453465-CDS-F-serratus_M_contig1117:115063..1152361622929002.7453465-CDS-F-serratus_M_contig1117:115063..115236Fucus serratus maleCDSF-serratus_M_contig1117 115064..115236 -
1690962664.386072-CDS-F-serratus_M_contig1117:115063..1152361690962664.386072-CDS-F-serratus_M_contig1117:115063..115236Fucus serratus maleCDSF-serratus_M_contig1117 115064..115236 -
1622929002.7735305-CDS-F-serratus_M_contig1117:115443..1157821622929002.7735305-CDS-F-serratus_M_contig1117:115443..115782Fucus serratus maleCDSF-serratus_M_contig1117 115444..115782 -
1690962664.4025137-CDS-F-serratus_M_contig1117:115443..1157821690962664.4025137-CDS-F-serratus_M_contig1117:115443..115782Fucus serratus maleCDSF-serratus_M_contig1117 115444..115782 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929002.7915392-UTR-F-serratus_M_contig1117:115782..1157971622929002.7915392-UTR-F-serratus_M_contig1117:115782..115797Fucus serratus maleUTRF-serratus_M_contig1117 115783..115797 -
1690962664.4120302-UTR-F-serratus_M_contig1117:115782..1157971690962664.4120302-UTR-F-serratus_M_contig1117:115782..115797Fucus serratus maleUTRF-serratus_M_contig1117 115783..115797 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1117.1078.1

>prot_F-serratus_M_contig1117.1078.1 ID=prot_F-serratus_M_contig1117.1078.1|Name=mRNA_F-serratus_M_contig1117.1078.1|organism=Fucus serratus male|type=polypeptide|length=377bp
MSHTLRFSAFIVVVLTSYALAFHAIFATCGEGSVLDEKFGTFAAALLSVF
GAALGEFGDILDAFADAEEYCAENPAPRLLESAGVVLLSTYLVIMAVVLL
NLLIAVLSSEHQKVSSKGEMEFHLARTRLILQNSLAVVHRRIPAPFNLIL
AGIGFLFDGVQECLWQYKNKNGERTKFTPATSTYGWFTFEGFLQRGAFAL
TMGVAALALSALLWIISLPWIAWSLLRWFRPWDQPRGDEGEEASSNERQG
HFRTFFFTLFRACAWILALAFAVFMCALCCIGSIILWARGLWGIAEWSCW
RLTEEGRAVSGEAESSCPTAMPGQERGDHWRHAWSVVQARNYRIRQESGS
VHFHVAPLLKSTKGLDMKRLVMLVKKR
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mRNA from alignment at F-serratus_M_contig1117:113235..115797-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1117.1078.1 ID=mRNA_F-serratus_M_contig1117.1078.1|Name=mRNA_F-serratus_M_contig1117.1078.1|organism=Fucus serratus male|type=mRNA|length=2563bp|location=Sequence derived from alignment at F-serratus_M_contig1117:113235..115797- (Fucus serratus male)
ATCCTGTGGAGGCTGATGTCCCACACATTACGTTTTTCGGCCTTCATCGT CGTCGTGCTCACCAGCTATGCACTAGCATTCCACGCCATTTTTGCCACTT GCGGCGAGGGCAGCGTTCTCGACGAGAAGTTCGGCACGTTTGCTGCAGCG CTCTTATCGGTTTTTGGCGCCGCCCTTGGGGAATTCGGGGACATACTCGA CGCCTTCGCAGACGCCGAAGAATATTGCGCCGAGAATCCCGCGCCCCGTC TATTGGAATCTGCCGGTGTTGTTCTTCTTTCGACGTACCTAGTGATCATG GCTGTGGTACTCCTCAACTTGCTCATAGCAGTGCTCAGCTCAGAGCACCA GAAGGTGAGTTGGATCATCGCATAGTTAGAGGAGCAGGCGGGCGCTTCTT TTGAGGTCTTTTTACGGGACCCAAAGTAACATTCTTCGTAGAAGCGGCAA ATATGTGCTTCGGTTGATATCGGATATATATATATTATATATATATACTA TTGCCAAACAATCTAAAACAAGCCCCCACTCTATCACATGTTCTTACTAC TATCTCTCCAGGTCAGCTCTAAGGGGGAGATGGAATTTCATCTGGCGCGA ACGAGGTTGATACTTCAAAACTCACTTGCCGTGGTACACCGTAGGATTCC GGCACCCTTCAACTTGATTTTAGCTGGCATTGGTTTCTTGTTCGACGGAG TTCAAGAGTGCTTATGGCAATATAAGAACAAAAAGTGAGAAGAGAGTTTT AAATGGCATTGGACATGCCCTCCGCGGTTGATTGTAGCAGTCAATGTTCC CTCCCACACGGTTCGACACTCCCCGACCGTGTGGGTACTCGGAAAGTTTT AATGTGTTCAGATTTTTCTATTTACCTCAAAATCCGGGGCGTGTGGTCTT CGTCGAGGGATGCATCGTGTTACATAAAACCTGGTTTTATGCTTCGCCTC ATCGCCCGACTGGTCTAGTGGGTAGCTTCGCACGTCCACAACTACGGGAA GTCGTGGGTTCGATTCTTGTCAAAAGTAGGATGTTTCTTCCGTCTTACGT AGCGGAAAGCGTGATAACGCGAGTGAGTAAAATTAAACCCCTGGTTGAAT TGTAAGAGTGCTGAACTTGCATCGCAAAAAATCGAAAGGCGAGAACCGGG GAGAGATGGGAAGACCCTTGGTGACCACAGGCAGGAGGGCAACGTTGCTC TAGGTGGGATTAGGATCAAGCACGTTGAGACCCATTGGCAGTTAAGTGAG ATACAAAACAAGTAGCAACCCCACCCCCCAACCCTGTGCCAAAATGAAGC AAATACTCGTCTAGCTTGCCATCTTCAACTTCGGAACTGTTCTGCAAAAA GAGCAGCGAGGTTTGCAGCTGTGATACCTTTGCTTGCGCTGATATCGCCC ATACCGCAGGAACATAACACGATGCCCAAGCTTCCCTACCTTTTGCTTCC GAGCCCGGTCTATCAAAGGCCCAGTAAAGCAAGCAAACGAGCTCAACAGG CAAACCCGATGTATCGAAGATACGATTCTGCAACGGGGCTTATCGCGGCA CAGTGTCTCCAATCAAGTCAGTCAGATATCGCAGTCCCAAAGACGCGCAA ATCTAGCGCAAGGTTCGCCGCCACCCCATAAAAAGATCGTACGGAGCGGT GAGCGTACAAAGTTCACGCCCGCCACTTCCACCTACGGGTGGTTCACATT TGAAGGCTTCCTTCAGCGAGGAGCGTTTGCCTTGACCATGGGAGTAGCCG CCTTGGCTTTGTCAGCTCTACTATGGATCATTTCACTCCCATGGATCGCC TGGAGCCTGCTTCGCTGGTTCCGTCCCTGGGACCAACCTCGGGTGAGGCG CTGTTTCTTTGTGTTGACAGTTTGAACGATTTCTGCACTTCAACTCGTCT GACGACGGTCGCGACTGAAATAATAGCGAATACATCGCTTCAGCGCCCGC CCCTGACGCGATGTCCTCGCTCGGAGAGGGTTCGCGGACGAGCGCCGTCC CGAGAGCTCCGATTTGTTTGTTCAGGTTATTTAGATCATGGCCAGGCTTA GACTGTATAACACAGGCGATGGCGTGGCCCGCGTTTGTATTACCAATAAC CGTTGTGATACTGATGTGACATTTATTGTCGTTCGCCCAGGGCGATGAGG GAGAAGAGGCGTCATCGAATGAGCGCCAGGGGCACTTCCGAACGTTTTTT TTTACATTGTTCAGAGCTTGCGCGTGGATATTAGCGCTTGCCTTCGCCGT GTTCATGTGTGCATTGTGTTGCATCGGCTCGATCATTCTATGGGCGCGAG GATTATGGGGTATTGCTGAATGGAGTTGTTGGCGACTCACAGAGGAAGGA AGGGCTGTGTCAGGGGAGGCGGAAAGCAGTTGCCCAACGGCGATGCCAGG GCAGGAGCGTGGGGACCATTGGAGACACGCGTGGAGCGTTGTACAGGCTC GAAACTACCGGATCCGACAAGAGAGCGGGTCGGTCCATTTCCATGTCGCC CCGCTGCTGAAAAGCACAAAGGGCTTGGATATGAAGCGTCTGGTGATGTT GGTCAAGAAGCGA
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Coding sequence (CDS) from alignment at F-serratus_M_contig1117:113235..115797-

>mRNA_F-serratus_M_contig1117.1078.1 ID=mRNA_F-serratus_M_contig1117.1078.1|Name=mRNA_F-serratus_M_contig1117.1078.1|organism=Fucus serratus male|type=CDS|length=2262bp|location=Sequence derived from alignment at F-serratus_M_contig1117:113235..115797- (Fucus serratus male)
ATGTCCCACACATTACGTTTTTCGGCCTTCATCGTCGTCGTGCTCACCAG
CTATGCACTAGCATTCCACGCCATTTTTGCCACTTGCGGCGAGGGCAGCG
TTCTCGACGAGAAGTTCGGCACGTTTGCTGCAGCGCTCTTATCGGTTTTT
GGCGCCGCCCTTGGGGAATTCGGGGACATACTCGACGCCTTCGCAGACGC
CGAAGAATATTGCGCCGAGAATCCCGCGCCCCGTCTATTGGAATCTGCCG
GTGTTGTTCTTCTTTCGACGTACCTAGTGATCATGGCTGTGGTACTCCTC
AACTTGCTCATAGCAGTGCTCAGCTCAGAGCACCAGAAGATGTCCCACAC
ATTACGTTTTTCGGCCTTCATCGTCGTCGTGCTCACCAGCTATGCACTAG
CATTCCACGCCATTTTTGCCACTTGCGGCGAGGGCAGCGTTCTCGACGAG
AAGTTCGGCACGTTTGCTGCAGCGCTCTTATCGGTTTTTGGCGCCGCCCT
TGGGGAATTCGGGGACATACTCGACGCCTTCGCAGACGCCGAAGAATATT
GCGCCGAGAATCCCGCGCCCCGTCTATTGGAATCTGCCGGTGTTGTTCTT
CTTTCGACGTACCTAGTGATCATGGCTGTGGTACTCCTCAACTTGCTCAT
AGCAGTGCTCAGCTCAGAGCACCAGAAGGTCAGCTCTAAGGGGGAGATGG
AATTTCATCTGGCGCGAACGAGGTTGATACTTCAAAACTCACTTGCCGTG
GTACACCGTAGGATTCCGGCACCCTTCAACTTGATTTTAGCTGGCATTGG
TTTCTTGTTCGACGGAGTTCAAGAGTGCTTATGGCAATATAAGAACAAAA
AGTCAGCTCTAAGGGGGAGATGGAATTTCATCTGGCGCGAACGAGGTTGA
TACTTCAAAACTCACTTGCCGTGGTACACCGTAGGATTCCGGCACCCTTC
AACTTGATTTTAGCTGGCATTGGTTTCTTGTTCGACGGAGTTCAAGAGTG
CTTATGGCAATATAAGAACAAAAACGGTGAGCGTACAAAGTTCACGCCCG
CCACTTCCACCTACGGGTGGTTCACATTTGAAGGCTTCCTTCAGCGAGGA
GCGTTTGCCTTGACCATGGGAGTAGCCGCCTTGGCTTTGTCAGCTCTACT
ATGGATCATTTCACTCCCATGGATCGCCTGGAGCCTGCTTCGCTGGTTCC
GTCCCTGGGACCAACCTCGGCGGTGAGCGTACAAAGTTCACGCCCGCCAC
TTCCACCTACGGGTGGTTCACATTTGAAGGCTTCCTTCAGCGAGGAGCGT
TTGCCTTGACCATGGGAGTAGCCGCCTTGGCTTTGTCAGCTCTACTATGG
ATCATTTCACTCCCATGGATCGCCTGGAGCCTGCTTCGCTGGTTCCGTCC
CTGGGACCAACCTCGGGGCGATGAGGGAGAAGAGGCGTCATCGAATGAGC
GCCAGGGGCACTTCCGAACGTTTTTTTTTACATTGTTCAGAGCTTGCGCG
TGGATATTAGCGCTTGCCTTCGCCGTGTTCATGTGTGCATTGTGTTGCAT
CGGCTCGATCATTCTATGGGCGCGAGGATTATGGGGTATTGCTGAATGGA
GTTGTTGGCGACTCACAGAGGAAGGAAGGGCTGTGTCAGGGGAGGCGGAA
AGCAGTTGCCCAACGGCGATGCCAGGGCAGGAGCGTGGGGACCATTGGAG
ACACGCGTGGAGCGTTGTACAGGCTCGAAACTACCGGATCCGACAAGAGA
GCGGGTCGGTCCATTTCCATGTCGCCCCGCTGCTGAAAAGCACAAAGGGC
TTGGATATGAAGCGTCTGGTGATGTTGGTCAAGAAGCGAGGCGATGAGGG
AGAAGAGGCGTCATCGAATGAGCGCCAGGGGCACTTCCGAACGTTTTTTT
TTACATTGTTCAGAGCTTGCGCGTGGATATTAGCGCTTGCCTTCGCCGTG
TTCATGTGTGCATTGTGTTGCATCGGCTCGATCATTCTATGGGCGCGAGG
ATTATGGGGTATTGCTGAATGGAGTTGTTGGCGACTCACAGAGGAAGGAA
GGGCTGTGTCAGGGGAGGCGGAAAGCAGTTGCCCAACGGCGATGCCAGGG
CAGGAGCGTGGGGACCATTGGAGACACGCGTGGAGCGTTGTACAGGCTCG
AAACTACCGGATCCGACAAGAGAGCGGGTCGGTCCATTTCCATGTCGCCC
CGCTGCTGAAAAGCACAAAGGGCTTGGATATGAAGCGTCTGGTGATGTTG
GTCAAGAAGCGA
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