mRNA_F-serratus_M_contig1116.1076.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1116.1076.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL) HSP 1 Score: 134 bits (336), Expect = 7.130e-34 Identity = 69/165 (41.82%), Postives = 99/165 (60.00%), Query Frame = 1
Query: 1 YYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKA-SLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLSKFGDNPGPEHWKAVMKALQYLKQTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAI 492
+ LG I DR R ++ +Q Y +T+ ERF + + P ++ LS+ADGP++D + AEM PYR +G L +VA TRPD+A+ LS+F +NPGP HW A ++ L+YLK T G++YGG E+ + DAD + D RRSVSG +M+ GG I
Sbjct: 223 HLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLKLSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTPVVFCDADWGTSVDDRRSVSGLVIMMNGGPI 387
BLAST of mRNA_F-serratus_M_contig1116.1076.1 vs. uniprot
Match: A0A146IDX7_MYCCL (Polyprotein (Fragment) n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146IDX7_MYCCL) HSP 1 Score: 134 bits (336), Expect = 3.140e-33 Identity = 70/165 (42.42%), Postives = 98/165 (59.39%), Query Frame = 1
Query: 1 YYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTG-KASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLSKFGDNPGPEHWKAVMKALQYLKQTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAI 492
+ LG + R+R RT+T Q Y + E+FG+ + VP LS P +D E +M +PYRE +G L+W++ TRPDLA+T TLS+F NPG HW A + LQYLK T +LG+TYGG+ E + L+ + DAD S D R++VSG L GG++
Sbjct: 978 WLLGMEVKRNRAERTLTLTQSTYIDALIEKFGMSNAKPLSVPLDPNHQLSIEQCPTSDTEKLDMKKVPYRELIGGLVWLSTATRPDLAFTVTTLSRFISNPGRPHWDAAKRVLQYLKGTRTLGLTYGGSAEKLGLNIFADADGMSLED-RKAVSGYVFTLNGGSV 1141
BLAST of mRNA_F-serratus_M_contig1116.1076.1 vs. uniprot
Match: A0A5D6XRE8_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRE8_9STRA) HSP 1 Score: 127 bits (319), Expect = 8.970e-33 Identity = 69/166 (41.57%), Postives = 98/166 (59.04%), Query Frame = 1
Query: 1 YYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKAS-LSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLSKFGDNPGPEHWKAVMKALQYLKQTASLGVTYGGAT------EDMKLSAWVDADHASCPDTRRSVSGGAVML 477
Y +G + RDRK RT+ Q+ YA TV +RF + +PT K+ L++A P + EM +PYR+AVG++M++ TRPD AY +S+F NPG E+W AV L+YLK T +LG+T GG + LSA+ DA +A+C DTRRS+ G +L
Sbjct: 122 YLIGWNTVRDRKQRTIHIHQENYANTVFKRFNHLDAQTVSIPTDKSIVLTQAMCPSTKEKTEEMANVPYRDAVGSVMYLIMSTRPDHAYFLREVSQFHVNPGREYWNAVKHGLKYLKGTTALGITLGGRENLTLLEKKTFLSAYTDASYANCKDTRRSIGGYITLL 287
BLAST of mRNA_F-serratus_M_contig1116.1076.1 vs. uniprot
Match: A0A146HBL6_MYCCL (Uncharacterized protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146HBL6_MYCCL) HSP 1 Score: 126 bits (317), Expect = 1.080e-32 Identity = 68/159 (42.77%), Postives = 94/159 (59.12%), Query Frame = 1
Query: 19 ITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGK-ASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLSKFGDNPGPEHWKAVMKALQYLKQTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAI 492
+ RDRK RT+T Q Y + E+FG+ I VP +LS P +DA +M +PYRE +GAL+W++ TRPDLA+T LS+F NPG HW A + LQYLK T +LG+T+GG+ L+ + DAD S + R+++SG L G AI
Sbjct: 3 VRRDRKRRTLTLTQSTYVDALMEKFGMTDAKPISVPLAPDQNLSVEQCPTDDATKLQMKKLPYRELIGALVWLSTATRPDLAFTVAVLSRFVSNPGRAHWDAAKRTLQYLKGTRTLGLTFGGSETKFGLNIFADADGMSM-ENRKAISGYVFTLNGAAI 160
BLAST of mRNA_F-serratus_M_contig1116.1076.1 vs. uniprot
Match: A0A329RH08_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RH08_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.310e-32 Identity = 72/171 (42.11%), Postives = 98/171 (57.31%), Query Frame = 1
Query: 1 YYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGK-ASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLSKFGDNPGPEHWKAVMKALQYLKQTASLGVTYGGATEDM------KLSAWVDADHASCPDTRRSVSGGAVMLGGGAI 492
Y LG I DRK RT+ Q +YA V + F I P + A LS + P +DAE EM IPYREAVG++M++ TRPD+A+ +S+F NPG EHW +++ L+YL T G+ GG+T+ L A+ D+D+++CPDTRRSV G ML G I
Sbjct: 2 YLLGWPIQCDRKNRTIFIYQHKYATKVLDGFSDYIPYPIATPADRSAKLSLSSQPSSDAEKDEMKDIPYREAVGSVMYLMVGTRPDMAFYLREVSQFLANPGMEHWNPIVRGLKYLSGTKDYGLLLGGSTDITPQNLANSLIAYSDSDYSNCPDTRRSVGGYITMLAGSPI 172
BLAST of mRNA_F-serratus_M_contig1116.1076.1 vs. uniprot
Match: A0A0J7KA47_LASNI (Retroelement pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KA47_LASNI) HSP 1 Score: 129 bits (323), Expect = 1.750e-31 Identity = 67/165 (40.61%), Postives = 101/165 (61.21%), Query Frame = 1
Query: 1 YYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPT-GKASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLSKFGDNPGPEHWKAVMKALQYLKQTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAI 492
Y++G I RDR +T+ Q Y V E+FG+ I P LS++ P++D M IP+REAVG+LM+ A ++RPD+ + +S++ +NPGPEHW+AV + ++Y K+TA+ G+ Y G + L + D+D+AS PDTRRS SG +L GGA+
Sbjct: 942 YFVGFKIKRDRSKKTIKISQCNYLLRVAEKFGMMDAKGISTPAESHMYLSKSMAPEDDDGKQAMAKIPFREAVGSLMFAACVSRPDIMFAVSVVSRYLENPGPEHWQAVKRIIRYAKETATYGIVYDGQNTN-GLIVYSDSDYASDPDTRRSTSGYITVLAGGAV 1105
BLAST of mRNA_F-serratus_M_contig1116.1076.1 vs. uniprot
Match: A0A6G0W6P6_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W6P6_9STRA) HSP 1 Score: 128 bits (321), Expect = 3.120e-31 Identity = 72/165 (43.64%), Postives = 100/165 (60.61%), Query Frame = 1
Query: 7 LGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVP-TGKASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLSKFGDNPGPEHWKAVMKALQYLKQTASLGVTYGGA--TEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAI 492
LG I R+R RT+ Q RY +TV ERF + ++ + P +LS++ +I+ M PYR VG+ M++A TRPDLA+ LS+F DNPGP HW+A +AL+YL T S G+ GG+ + LSA+VDAD+A+CPDTRR VSG ++ G I
Sbjct: 565 LGWQIERNRSERTLFLHQTRYCETVVERFDMASSNPVHTPFESSKTLSKSQCATTPEDISFMASKPYRSLVGSPMYLAMGTRPDLAFPLQQLSQFLDNPGPAHWRAAKRALRYLNGTRSRGLLLGGSDSVHNPFLSAYVDADYANCPDTRRCVSGYVLLFLGSPI 729
BLAST of mRNA_F-serratus_M_contig1116.1076.1 vs. uniprot
Match: A0A6G0W780_9STRA (Integrase catalytic domain-containing protein n=3 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W780_9STRA) HSP 1 Score: 128 bits (321), Expect = 3.370e-31 Identity = 72/165 (43.64%), Postives = 100/165 (60.61%), Query Frame = 1
Query: 7 LGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVP-TGKASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLSKFGDNPGPEHWKAVMKALQYLKQTASLGVTYGGA--TEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAI 492
LG I R+R RT+ Q RY +TV ERF + ++ + P +LS++ +I+ M PYR VG+LM++A TRPDLA+ LS+F DNP P HW+A +AL+YL T S G+ GG+ + LSA+VDAD+A+CPDTRR VSG ++ G I
Sbjct: 1709 LGWQIERNRSERTLFLHQTRYCETVVERFDMASSNPVHTPFESSKTLSKSQCATTPEDISFMASKPYRSLVGSLMYLAMGTRPDLAFPLQQLSQFLDNPDPAHWRAAKRALRYLNGTRSRGLLLGGSDSVHNPFLSAYVDADYANCPDTRRCVSGYVLLFLGSPI 1873
BLAST of mRNA_F-serratus_M_contig1116.1076.1 vs. uniprot
Match: UPI0004417247 (hypothetical protein n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=UPI0004417247) HSP 1 Score: 124 bits (310), Expect = 5.370e-31 Identity = 67/163 (41.10%), Postives = 92/163 (56.44%), Query Frame = 1
Query: 7 LGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTG-KASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLSKFGDNPGPEHWKAVMKALQYLKQTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAI 492
L ITRDR R ++ DQ+RY Q + + FG+ S + P LS + P+ E AEM G+PY AVGAL+++A TRPD+A+ LS+F NPGP HW AV +YLK T +T+ +++VDADH PD RS SG + +G GA+
Sbjct: 64 LAVGITRDRAKRRLSMDQRRYTQDMLDTFGMTDCSPVLTPMDPNTRLSASMSPQTPEEKAEMVGVPYINAVGALLYLAIATRPDIAHAVGVLSRFSKNPGPRHWTAVKHLFRYLKGTLDYKLTFWPDESGEPFTSFVDADHGGNPDDGRSTSGFVLKIGSGAV 226
BLAST of mRNA_F-serratus_M_contig1116.1076.1 vs. uniprot
Match: A0A4S4K4A0_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4K4A0_9AGAM) HSP 1 Score: 119 bits (299), Expect = 5.600e-31 Identity = 66/165 (40.00%), Postives = 95/165 (57.58%), Query Frame = 1
Query: 1 YYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVI--PVPTGKASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLSKFGDNPGPEHWKAVMKALQYLKQTASLGVTYGGATEDMKL-SAWVDADHASCPDTRRSVSGGAVMLGGG 486
+ LG + RDR R ++ Q++Y + ERF + + + P+P G LS+A PK+ EIA M +PYR+ VGALM++A TRPD++Y L++F NPGP HWKA +YL+ T + +TY +L + + DADH D RRS SG V +G G
Sbjct: 32 FLLGVRVERDRSKRLLSLSQRQYITDILERFEMSNCTTVTTPLPDGHR-LSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRRSTSGMVVKMGTG 195 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1116.1076.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1116.1076.1 >prot_F-serratus_M_contig1116.1076.1 ID=prot_F-serratus_M_contig1116.1076.1|Name=mRNA_F-serratus_M_contig1116.1076.1|organism=Fucus serratus male|type=polypeptide|length=164bp YYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRback to top mRNA from alignment at F-serratus_M_contig1116:54000..54491+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1116.1076.1 ID=mRNA_F-serratus_M_contig1116.1076.1|Name=mRNA_F-serratus_M_contig1116.1076.1|organism=Fucus serratus male|type=mRNA|length=492bp|location=Sequence derived from alignment at F-serratus_M_contig1116:54000..54491+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1116:54000..54491+ >mRNA_F-serratus_M_contig1116.1076.1 ID=mRNA_F-serratus_M_contig1116.1076.1|Name=mRNA_F-serratus_M_contig1116.1076.1|organism=Fucus serratus male|type=CDS|length=984bp|location=Sequence derived from alignment at F-serratus_M_contig1116:54000..54491+ (Fucus serratus male)back to top |