mRNA_F-serratus_M_contig1115.1073.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1115.1073.1
Unique NamemRNA_F-serratus_M_contig1115.1073.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig1115.1073.1 vs. uniprot
Match: D8LLN9_ECTSI (Similar to asp (Abnormal spindle)-like, microcephaly associated n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN9_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 4.510e-54
Identity = 118/221 (53.39%), Postives = 144/221 (65.16%), Query Frame = 2 
Query:  119 RIAEARERARREPSLILGVKVKHALWDLEHSTRLTAIVRACIALELMPGYSKVCC*AIAESSCSEVLYDLIRGLNRSPPHQKILVVILPRQIRPQKVSQYRETGDDLPQLIAATPTATATLMNLLQMYRERQDMFLPTLRPVQKLAAAHQPTKDECNESKYLQRLESLEKILMRKVAVEAKSELVARSRIGAG---------RSARSLKAVNLLLKELSKE 754
            RI +A   A  +PS ILG +V  AL  LEH T LTAI+RACIALEL   YSKVCC  +A S C +VLYDLIRGLNRSPPHQKIL   +             + GD LP L+AA P A  T ++LLQMYRERQ++FLPT+R +Q+L  AH+PTKDECN  K+  RLES+  IL RK AVEAKS + AR               R+++SLKAV  LL EL+++
Sbjct: 2298 RIEKANANALADPSQILGTRVNDALTALEHCTHLTAIIRACIALELTSRYSKVCCEVMARSRCPQVLYDLIRGLNRSPPHQKILKYAI------TTFRNIAQRGDGLPALLAAPPVAAETYVDLLQMYRERQEVFLPTVRLLQQLLNAHKPTKDECNSVKHRPRLESIRDILARKAAVEAKS-IAARGXXXXXXXXXXXXXXRASKSLKAVQGLLDELARD 2511
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BLAST of mRNA_F-serratus_M_contig1115.1073.1 vs. uniprot
Match: A0A6H5KRH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRH5_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 2.100e-53
Identity = 115/223 (51.57%), Postives = 144/223 (64.57%), Query Frame = 2 
Query:  119 RIAEARERARREPSLILGVKVKHALWDLEHSTRLTAIVRACIALELMPGYSKVCC*AIAESSCSEVLYDLIRGLNRSPPHQKILVVILPRQIRPQKVSQYRETGDDLPQLIAATPTATATLMNLLQMYRERQDMFLPTLRPVQKLAAAHQPTKDECNESKYLQRLESLEKILMRKVAVEAKSELVARS-----------RIGAGRSARSLKAVNLLLKELSKE 754
            RI  A   A  +PS +LG +V  AL  LEH T LTAI+RACIALEL   YSKVCC  +A S C +VLYDLIRGLNRSPPHQKIL  ++             + GD LP L+AA P A  T ++LLQMYRERQ++FLPT+R +Q+L  AH+PTKD+CN  K+  RLES+  IL RK AVEAKS + AR                 R+++SLKA+  LL EL+++
Sbjct: 2179 RIERANANALADPSQVLGTRVNDALTALEHCTHLTAIIRACIALELTSRYSKVCCEVMARSRCPQVLYDLIRGLNRSPPHQKILKYVI------TTFRNIAQRGDGLPALLAAPPVAAETYVDLLQMYRERQEVFLPTVRLLQQLLNAHKPTKDKCNSVKHRPRLESMRDILARKAAVEAKS-IAAREGXXXXXXXXXXXXXXXRASKSLKAIQGLLDELARD 2394
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BLAST of mRNA_F-serratus_M_contig1115.1073.1 vs. uniprot
Match: A0A835Z978_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z978_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 4.950e-18
Identity = 79/224 (35.27%), Postives = 107/224 (47.77%), Query Frame = 2 
Query:   89 AGRRIPDS*RRIAEARERARREPSLILGVKVKHALWDLEHSTRLTAIVRACIALELMPGYSKVCC*AIAES-SCSEVLYDLIRGLNRSPPHQKILVVILPRQIRPQKVSQYRETGDDLPQLIAATPTATATLMNLLQMYRERQDMFLPTLRPVQKLAAAHQPTKDECNESKYLQRLESLEKILMRKVAVEAKSELVARSRIGAGRS----ARSLKAVNLLLKEL 745
            AG  +  +  ++  A   AR  P   LG +V +AL  +   T LT + RAC  LEL   YS V C  +AE  +   VLY+LIR LNRSPPHQ+IL   L      + +         L  LIAA P A   L++++QMYR+  ++FL   R    + A         +E +   RL S+E  L  K   E K     RS+ GA  +      SLKAV+ L   L
Sbjct: 1586 AGPAVAAARAKVQTANAFARNNPGETLGARVANALAIMARGTMLTKVARACKTLELSTRYSPVSCMVVAEDQNAPTVLYNLIRSLNRSPPHQRILKFTL------ETLRNIARHNRRLCGLIAAPPGAATVLLDVMQMYRDNPELFLLATRLFTCMVAQIPAFAMAGSEQQASDRLASIEIQLRSKARAEEK-----RSKSGANATNMGATNSLKAVHALAAAL 1798
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BLAST of mRNA_F-serratus_M_contig1115.1073.1 vs. uniprot
Match: A0A7S4IHQ8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IHQ8_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.300e-14
Identity = 57/182 (31.32%), Postives = 95/182 (52.20%), Query Frame = 2 
Query:  116 RRIAEARERARREPSLILGVKVKHALWDLEHSTRLTAIVRACIALELMPGYSKVCC*AIAESSCSEVLYDLIRGLNRSPPHQKILVVILPRQIRPQKVSQYRETGDDLPQLIAATPTATATLMNLLQMYRERQDMFLPTLRPVQKLAAAHQPTKDECNESKYLQRLESLEKILMRKVAVEAK 661
            ++I  A E A  EP + LGV+   AL  L+ S RL  +++A + LE     S  CC A A +    +LY L+R  NRS PH ++L  +L   +  + V++Y E  D +     AT  +   LM+LLQM+R++ D+F   L  +  +  + +     C   + ++RL+ +  +  RK+A+  K
Sbjct: 2410 KKIERANEAALAEPHMRLGVRTSVALHILQTSKRLAEVMKAVLTLETATRLSDQCCVAFAGAGAPSILYALVRTCNRSLPHMELLHHVL---LTLKNVAEYSELIDSV-----ATANSVDILMDLLQMFRDKDDIFSTALVLMDLIVFSKEEFLVLCGRRENMKRLKGIHFLCQRKMALSRK 2583
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BLAST of mRNA_F-serratus_M_contig1115.1073.1 vs. uniprot
Match: A0A5J4XL67_9CHLO (Abnormal spindle-like microcephaly-associated protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XL67_9CHLO)

HSP 1 Score: 76.3 bits (186), Expect = 6.680e-12
Identity = 65/212 (30.66%), Postives = 98/212 (46.23%), Query Frame = 2 
Query:   35 RSCCSVLP*GASCCGSHSAGRRIPDS*RRIAEARERARREPSLILGVKVKHALWDLEHSTRLTAIVRACIALELMPGYSKVCC*AIAESSCSEVLYDLIRGLNRSPPHQKIL---VVILPRQIRPQKVSQYRETGDDLPQLIAATPTATATLMNLLQMYRERQDMFLPTLRPVQKLAAAHQPTKDECNESKYLQRLESLEKILMRKVAVEAK 661
            +SCC+             AGRR     +R+ +A   A ++P   LG   + AL  L  +  L     A   L +   YSK CC  IAE      L   IRG NRS PH  +L   V IL        +S+Y++    L     A+      L   LQM+R+++DMFL  +  V +L A  Q      + +  ++++E++ +IL+RKV  E+K
Sbjct: 1358 KSCCAACAWWRGGQVRMHAGRRKAQMRKRLQQAAVAAAQDPHRQLGHLTRGALQQLLAAKHLPQASAAMATLSMCSSYSKGCCSMIAEGGGVTSLLQFIRGCNRSQPHVDLLKHAVAILAH------LSRYQQLHSSL----LASSDCVQVLAEQLQMFRDKEDMFLAVITVVDRLVAVPQQAVLIGHMTPAVKQMEAVAQILLRKVDTESK 1559
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BLAST of mRNA_F-serratus_M_contig1115.1073.1 vs. uniprot
Match: A0A7S1E7E3_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E7E3_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.300e-11
Identity = 47/171 (27.49%), Postives = 91/171 (53.22%), Query Frame = 2 
Query:  215 RLTAIVRACIALELMPGYSKVCC*AIAESSCSEVLYDLIRGLNRSPPHQKILVVILPRQIRPQKVSQYRETGDDLPQLIAATPTATATLMNLLQMYRERQDMFLPTLRPVQKLAAAHQPTKDECNESKYLQRLESLEKILMRKVAVEAKSELVARSRIGAGRSARSLKAVN 727
            RLT I  A I LE+    S+ CC A        +LY+L+   NRS PH +I+ ++L   +  + VS++++  +D+     ATP +   +++L+QM+R++ D+F+  L    +L   ++  K+ C++ + ++RL  +    ++KVA       +  SR G  +  +  K+ +
Sbjct:    1 RLTEITDAAITLEMSTRLSRNCCVAFVNVGAPSILYELLGTCNRSLPHVEIVRIVL---LTLRNVSKHKDLLNDV-----ATPGSGGVILDLVQMFRDKDDVFVVALIIFSRLLRYNKKLKETCSQPENMKRLTHV----LKKVAPSGSDLRIPGSRHGTSKRKKKYKSTS 159
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BLAST of mRNA_F-serratus_M_contig1115.1073.1 vs. uniprot
Match: A0A0L0DQD4_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DQD4_THETB)

HSP 1 Score: 72.0 bits (175), Expect = 1.790e-10
Identity = 58/186 (31.18%), Postives = 97/186 (52.15%), Query Frame = 2 
Query:  119 RIAEARERARREPSLI-----LGVKVKHALWDLEHSTRLTAIVRACIALELMPGYSKVCC*AIAESSCSEVLYDLIRGLNRSPPHQKILVVILPRQIRPQKVSQYRETGDDLPQLIAATPTATATLMNLLQMYRERQDMFLPTLRPVQKLAAAHQPTKDECNESKYLQRLESLEKILMRKVAVEAK 661
            R+A  R R R   + +     LG + + AL  L  S  LT I +AC  LE+    S VCC ++A +    +++ LI+  NRS PH ++L + L   +R   ++++R        L+ +TP +   ++ L+QMYR++ D+FL  L  ++ LAA  +           ++RL S++ IL RK  +E K
Sbjct: 1648 RLANLRSRLREINASVTEDMKLGNRTQAALAILLTSKHLTHIHKACSNLEVSTRLSFVCCDSLAGNDAVPIIFTLIKSCNRSKPHVELLKIAL-NILR--NLARWRTVD-----LVLSTPGSVDIIIELMQMYRDKVDIFLRCLSLMRLLAAKRRRAAIIVAVPLAVRRLTSIQSILNRKATMERK 1825
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BLAST of mRNA_F-serratus_M_contig1115.1073.1 vs. uniprot
Match: A0A1Y1HJA9_KLENI (Microtubule-associated protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HJA9_KLENI)

HSP 1 Score: 60.5 bits (145), Expect = 1.280e-6
Identity = 50/178 (28.09%), Postives = 83/178 (46.63%), Query Frame = 2 
Query:  131 ARERARREPSLILGVKVKHALWDLEHSTRLTAIVRACIALELMPGYSKVCC*AIAESSCSEVLYDLIRGLNRSPPHQKIL---VVILPRQIRPQKVSQYRETGDDLPQLIAATPTATATLMNLLQMYRERQDMFLPTLRPVQKLAAAHQPTKDECNESKYLQRLESLEKILMRKVAVE 655
            AR  AR E  + LG +   AL  L  S +++  + AC A+++    S VCC  IA +S    L   I+  NRS PH ++L   + I+    + + +  Y          +   P     L+  LQMYR+++D+F   L  +  +    +  +      + + RLES+  IL RKV ++
Sbjct: 2132 ARATARLEEPMTLGSRTTAALRVLLASKQVSHALHACAAIDMSTRLSPVCCERIAANSAVPTLLRFIQSCNRSTPHLQLLRHGLSIIRNLCKHRSLIGY----------VVEAPDCVNILVEQLQMYRDKEDVFNLALETLLLICRDAERAETVRAMPEIVFRLESIASILSRKVQLD 2299
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BLAST of mRNA_F-serratus_M_contig1115.1073.1 vs. uniprot
Match: UPI00109BA7E8 (abnormal spindle-like microcephaly-associated protein homolog n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BA7E8)

HSP 1 Score: 57.0 bits (136), Expect = 1.800e-5
Identity = 44/140 (31.43%), Postives = 68/140 (48.57%), Query Frame = 2 
Query:  116 RRIAEARERARREPSLILGVKVKHALWDLEHSTRLTAIVRACIALELMPGYSKVCC*AIAESSCSEVLYDLIRGLNRSPPHQKILVVILPRQIRPQKV-SQYRETGDDLPQLIAATPTATATLMNLLQMYRERQDMFLPT 532
            RRI  A + A    S+ L  + + AL  L     LT I    + LE++   S VCC  + +    ++++ +IR  NRS PH +IL   +   I   K  S YR   D+        P A ATL+ L+ ++RE++ +F  T
Sbjct: 2773 RRIKAANQAA--TESMKLCNRARSALDYLLCCKNLTTIFDVLVNLEVVTRLSYVCCEQLVKDKALQIIFTVIRNSNRSLPHMQILKYAIAILINLAKCPSTYRSIYDE--------PDAMATLLELITVFREKEQIFSKT 2902
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BLAST of mRNA_F-serratus_M_contig1115.1073.1 vs. uniprot
Match: D2VET9_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VET9_NAEGR)

HSP 1 Score: 55.5 bits (132), Expect = 5.280e-5
Identity = 44/167 (26.35%), Postives = 77/167 (46.11%), Query Frame = 2 
Query:  167 LGVKVKHALWDLEHSTRLTAIVRACIALELMPGYSKVCC*AIAESSCSEVLYDLIRGLNRSPPHQKILVVILPRQIRPQKVSQYRETGDDLPQLIAATPTATATLMNLLQMYRERQDMFLPTLRPVQKLAAAHQPTKDECNESKYLQRLESLEKILMRKVAVEAKSE 667
            L  + + +L  L  S  +  ++ AC  L     +S  CC ++  ++   +LY  I+ LNRS PH ++L+ IL   +   ++         L  L+         L + LQ+YRER+++F+  L  ++K          E      L+R  SL K++ RK A + K +
Sbjct: 1020 LKYRTQRSLEVLLKSNSVNQVMSACANLATTTTWSDSCCESLVTNNAVPILYSFIKMLNRSKPHTELLIHILDILLNLTRIKY-------LNCLVHEKNEWFEILFDQLQIYREREEIFMRALSLIKKADTKRLKAVRE----DLLKRCVSLSKLMQRKYATDKKKQ 1175
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1115.1073.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LLN9_ECTSI4.510e-5453.39Similar to asp (Abnormal spindle)-like, microcepha... [more]
A0A6H5KRH5_9PHAE2.100e-5351.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z978_9STRA4.950e-1835.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4IHQ8_9STRA1.300e-1431.32Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A5J4XL67_9CHLO6.680e-1230.66Abnormal spindle-like microcephaly-associated prot... [more]
A0A7S1E7E3_9STRA1.300e-1127.49Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A0L0DQD4_THETB1.790e-1031.18Uncharacterized protein n=1 Tax=Thecamonas trahens... [more]
A0A1Y1HJA9_KLENI1.280e-628.09Microtubule-associated protein n=1 Tax=Klebsormidi... [more]
UPI00109BA7E81.800e-531.43abnormal spindle-like microcephaly-associated prot... [more]
D2VET9_NAEGR5.280e-526.35Predicted protein n=1 Tax=Naegleria gruberi TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1115contigF-serratus_M_contig1115:43650..48590 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score85.1
Seed ortholog evalue1.8e-14
Seed eggNOG ortholog2880.D8LLN9
Preferred nameASPM
KEGG koko:K16743,ko:K16774
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000212,GO:0000226,GO:0000280,GO:0000922,GO:0001764,GO:0002052,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005856,GO:0005874,GO:0005886,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007399,GO:0007405,GO:0007417,GO:0007420,GO:0007548,GO:0008150,GO:0008283,GO:0008284,GO:0008406,GO:0008584,GO:0009786,GO:0009966,GO:0009967,GO:0009987,GO:0010646,GO:0010647,GO:0010720,GO:0010721,GO:0015630,GO:0016020,GO:0016043,GO:0016324,GO:0016477,GO:0017145,GO:0019827,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0021537,GO:0021543,GO:0021872,GO:0021873,GO:0021987,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023056,GO:0030111,GO:0030154,GO:0030177,GO:0030496,GO:0030900,GO:0032501,GO:0032502,GO:0032504,GO:0036445,GO:0036449,GO:0040007,GO:0040011,GO:0042127,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044446,GO:0044459,GO:0044464,GO:0044703,GO:0045137,GO:0045177,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045665,GO:0045769,GO:0046546,GO:0046661,GO:0048103,GO:0048232,GO:0048285,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048589,GO:0048608,GO:0048609,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0050767,GO:0050768,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0051094,GO:0051179,GO:0051225,GO:0051235,GO:0051239,GO:0051240,GO:0051241,GO:0051301,GO:0051302,GO:0051321,GO:0051445,GO:0051640,GO:0051641,GO:0051642,GO:0051651,GO:0051653,GO:0051657,GO:0051661,GO:0051674,GO:0051704,GO:0051726,GO:0051782,GO:0051960,GO:0051961,GO:0051962,GO:0055057,GO:0060284,GO:0060322,GO:0060828,GO:0061351,GO:0061458,GO:0061842,GO:0065007,GO:0065008,GO:0070925,GO:0071840,GO:0071944,GO:0072089,GO:0072091,GO:0072686,GO:0072687,GO:0090263,GO:0090306,GO:0097150,GO:0097431,GO:0098590,GO:0098727,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0140013,GO:1902692,GO:1903046,GO:1990752,GO:2000026,GO:2000177,GO:2000179,GO:2000241,GO:2000648
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG5022@1,KOG0160@2759,KOG0165@1,KOG0165@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons7
Model size821
Cds size276
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929000.839086-UTR-F-serratus_M_contig1115:43649..437381622929000.839086-UTR-F-serratus_M_contig1115:43649..43738Fucus serratus maleUTRF-serratus_M_contig1115 43650..43738 +
1690962663.7526007-UTR-F-serratus_M_contig1115:43649..437381690962663.7526007-UTR-F-serratus_M_contig1115:43649..43738Fucus serratus maleUTRF-serratus_M_contig1115 43650..43738 +
1622929000.8529966-UTR-F-serratus_M_contig1115:44265..443531622929000.8529966-UTR-F-serratus_M_contig1115:44265..44353Fucus serratus maleUTRF-serratus_M_contig1115 44266..44353 +
1690962663.7632737-UTR-F-serratus_M_contig1115:44265..443531690962663.7632737-UTR-F-serratus_M_contig1115:44265..44353Fucus serratus maleUTRF-serratus_M_contig1115 44266..44353 +
1622929000.8647087-UTR-F-serratus_M_contig1115:45232..453061622929000.8647087-UTR-F-serratus_M_contig1115:45232..45306Fucus serratus maleUTRF-serratus_M_contig1115 45233..45306 +
1690962663.7720878-UTR-F-serratus_M_contig1115:45232..453061690962663.7720878-UTR-F-serratus_M_contig1115:45232..45306Fucus serratus maleUTRF-serratus_M_contig1115 45233..45306 +
1622929000.8741565-UTR-F-serratus_M_contig1115:47058..471791622929000.8741565-UTR-F-serratus_M_contig1115:47058..47179Fucus serratus maleUTRF-serratus_M_contig1115 47059..47179 +
1690962663.7809513-UTR-F-serratus_M_contig1115:47058..471791690962663.7809513-UTR-F-serratus_M_contig1115:47058..47179Fucus serratus maleUTRF-serratus_M_contig1115 47059..47179 +
1622929000.8851833-UTR-F-serratus_M_contig1115:47376..474851622929000.8851833-UTR-F-serratus_M_contig1115:47376..47485Fucus serratus maleUTRF-serratus_M_contig1115 47377..47485 +
1690962663.7894185-UTR-F-serratus_M_contig1115:47376..474851690962663.7894185-UTR-F-serratus_M_contig1115:47376..47485Fucus serratus maleUTRF-serratus_M_contig1115 47377..47485 +
1622929000.9385705-UTR-F-serratus_M_contig1115:48526..485901622929000.9385705-UTR-F-serratus_M_contig1115:48526..48590Fucus serratus maleUTRF-serratus_M_contig1115 48527..48590 +
1690962663.8248987-UTR-F-serratus_M_contig1115:48526..485901690962663.8248987-UTR-F-serratus_M_contig1115:48526..48590Fucus serratus maleUTRF-serratus_M_contig1115 48527..48590 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929000.8973947-CDS-F-serratus_M_contig1115:47485..475001622929000.8973947-CDS-F-serratus_M_contig1115:47485..47500Fucus serratus maleCDSF-serratus_M_contig1115 47486..47500 +
1690962663.7989073-CDS-F-serratus_M_contig1115:47485..475001690962663.7989073-CDS-F-serratus_M_contig1115:47485..47500Fucus serratus maleCDSF-serratus_M_contig1115 47486..47500 +
1622929000.9113162-CDS-F-serratus_M_contig1115:47934..480151622929000.9113162-CDS-F-serratus_M_contig1115:47934..48015Fucus serratus maleCDSF-serratus_M_contig1115 47935..48015 +
1690962663.8069365-CDS-F-serratus_M_contig1115:47934..480151690962663.8069365-CDS-F-serratus_M_contig1115:47934..48015Fucus serratus maleCDSF-serratus_M_contig1115 47935..48015 +
1622929000.9232776-CDS-F-serratus_M_contig1115:48346..485261622929000.9232776-CDS-F-serratus_M_contig1115:48346..48526Fucus serratus maleCDSF-serratus_M_contig1115 48347..48526 +
1690962663.8147714-CDS-F-serratus_M_contig1115:48346..485261690962663.8147714-CDS-F-serratus_M_contig1115:48346..48526Fucus serratus maleCDSF-serratus_M_contig1115 48347..48526 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1115.1073.1prot_F-serratus_M_contig1115.1073.1Fucus serratus malepolypeptideF-serratus_M_contig1115 47486..48526 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1115.1073.1

>prot_F-serratus_M_contig1115.1073.1 ID=prot_F-serratus_M_contig1115.1073.1|Name=mRNA_F-serratus_M_contig1115.1073.1|organism=Fucus serratus male|type=polypeptide|length=92bp
MNLLQMYRERQDMFLPTLRPVQKLAAAHQPTKDECNESKYLQRLESLEKI
LMRKVAVEAKSELVARSRIGAGRSARSLKAVNLLLKELSKE*
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mRNA from alignment at F-serratus_M_contig1115:43650..48590+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1115.1073.1 ID=mRNA_F-serratus_M_contig1115.1073.1|Name=mRNA_F-serratus_M_contig1115.1073.1|organism=Fucus serratus male|type=mRNA|length=4941bp|location=Sequence derived from alignment at F-serratus_M_contig1115:43650..48590+ (Fucus serratus male)
CCGCGGTGACATACATCCAGACCTGGTGGCGGGACGCAGCTGCTGTAGCG
TGCTACCGTGAGGGGCTTCATGCTGTGGTAGTCATTCAGGCGAGTGTGCG
CTGTGCCATAGCTACTGCTCGTTACCGTCGGACTATCTTCGCGGCGACAT
ACATCCAGACCTGGTGGCGGGGTGAAACCGTTGTAGCGCGCTACCGCGAG
GAATTACATGATGACTATAACTCCATCTTTTACTGCAGCTACCGTCGAGT
GCTGTCTGTTGTTAACGTTCGTATTGCACCTCGTGCTTTGTTTCATTTTT
CCGTCATAGCCTTGGCATTCTGTATCGATCCCACGAAAACAAGTTACTCC
TTGCTGGGCTGGTCAAGCTTGTCCAATTAGAAACACGCAATATTTTTGTG
ATTGTTACTTCAAAATTTCGTTCAAGCACGGTTTGAACACACAGCAGTAA
AACAAATTGTAGAATTCCTAATACCAGGTACAGTATATATTTCAGTTCGA
CGCCCGGGGTTTTATGTAATAAAACATAAGGAAAATATCTTTGGAGACGA
TCTGCCGTCAACGCCGGATTCTTCCTTTCCATGCGACCGCGCGTGGTATG
GCGGTACGGCGAGCAGCAGGccgtaggataCCGGATTCATGACGCCGGAT
CGCCGAAGCGAGGGAGAGAGCTCGTCGAGAACCATCCCTAATCCTCGGAG
TGAAGTGAGTCCCCAAAGCGATAGCCTTATCCGAGACAAAAATAGTAGCA
GTACAGTTACAGTAGTGTAATAGTATATACTAATAGTAAAGTGtTTTTAA
ATGGTACAAAGTTGCACTACAACCTGAGTCCTCTTTTTTTTCTCTTTTTT
TTTTTACCGTCGAAAATGACACCTGAAGTAGGAATACTTGTGTTTGCCCG
TTCAAAATGAAATAATGATGTAGGTGAGACCTAAAATGCTATGCATCTTA
TCATCTCCCGGTGCATGAAAGATAGCCATGGCCGTAAATGTATGTATGAT
CATCACATATGATATAGAAGAGTATGGATCAACGGCGTAAAGGTTGCCAA
CCCTGGTTGTGGTCAGCTGAACAGAGAAAATGCTTTTTTTCCCTGTCCCC
GTACGCGCCAGAGAATTGGGTCTCGCGGGACGGATCCGGCCGTTCCGTCC
CGCATCAGCCTGCTCTGTCTCCACATTCAGGCTAAATCTGGTGTTTACTC
ACGGAATTCCTCCCGCTTTCCGCGGCGGCCTCCATTTGTTTATACTGTCA
TATGCCATAGGATCAGTTCCGGGTTTATCGGGTCACGTAATTGCGTATCG
AAGGCGTTCGCTGCCTAGAGTCCACCGGCACAGGACCCCTAGTCCTCAAG
GTTGTTCCAAACGAGTGCTGCCTTGGCAGGCCACCATGAACCAAGTAAGA
TGCGCCCCTCTTTCCCACACGCACTATTGGTATGGAGCGGGCATGTTGAA
AGTACCGGCGGCATCGAAGAGGTAAATGGAGTACCGTACATAACTGATAC
ACTACGGGTTAAACATGACACAGGAATTTGGTAAACGCGTTCCCCCGCGA
TATGGTTACGCCCTCTCGTTTGTCCTTGTCCAGGGTAAAGCACGCGCTGT
GGGACTTGGAGCACAGCACGCGGCTGACGGCAATCGTCCGTGCCTGCATT
GCTCTCGGTTAGGAGTGGGAAACTTGCCTGTATTGACGTGAAGAACAAAC
ATGAAAGCAAGACAAAATGTGTTTTTTAGCAGCATCGGTATTATTATCCC
CACGCCCCAAACTCAACCCCCTTAACGAAGCGTTCGTGCCTCAAGATGGT
GGATAAACGGAGTCTGATGAGAGTGGTGCGCTGTTTTGTTTATATGCCTT
CGAAAACGTTCAGAAAGGAGATAAAACAAAGCGTATATTATTTCATTGAT
ATTCTAAGAGTAACGAGCGTCCTCGCTTAAATTAAGAGTATTTGCCCGTT
GGAAAACAGATGGGGACGGAGTGGGGAAAAGTGGTACCATACCCGGCATT
TATATTACATTACCTAGATCAAGTCGTAAACGTCTCTGTGAAGAGTACTG
GAACTCCCCACATGGCTTATAATTACGGCATCTACTAGCCCCATACGTAG
GGATAGTTTAATAAGGACCGACCAATCTCAGACCTCCCTGGCAGGGAAAT
ACTCTCAGATTCGACCAATGAAAGACGATTTTTGTAAGGATTTTATAAGG
ACGATTGGTGGACTCAGTGCATTCCAGACAATCCCATGAGATTGATCATC
AATAGCACCCAGCTTCTGTAGATTACTCTCATACGGGTCTACCATCGGTG
GAGCCCTTTCACTTGAAAATATATAGGCAGCTCACACACACGAACGCGCC
GGCGGCAGGATCGATGCACCATGCTGGTGTGGCGGTACATCCCCACTATA
ATGTGTAGTTGGTTTCGTTTCTTGGAGCTTGTCACCTGTCGTTGAGGTCA
AGCCTGTATTTTCTCAGCATGTACCCACGGCGGTGGTTGTCCCTAAACAG
CCGAGCTAAATCATTCATAGTTCAAGGGAGGCATAAATGTTTCGTCGGCG
ATTCCGCATTCCATACATCTCTCCGTGGAGCTCCTCTCCTTGTTGGCGAC
ACAACAGAAGTGGTATCACTATCTGCAAGTCAAGTACAGAGCTTAATGAC
ACATTACTAAATAATACATACCATCGTGCACTGTATATACTACTTGTTGT
ACAGCAGTCGGTACTACTTGTTGACTATTGTTGTTTTTATCTAATTTTTG
TACCTGATATACAAAAATTATTAGAGTTACATAGCGAATTATTCCCGGAC
TGTGCTTGTGTCCATTCATCTATGAATACCGACAATGACGAGGGTAAAAC
CTTCACATACGTTGGTGTGTGAGTTTGTAACACCCCAATATGTCCTTCTC
TTTCTCTTTTTTACAAGAAAAGGCTTCTTCAACATTTTTACGCGCTTCGC
GCGAATAATAGAATTATTTATAAAAATCTCCTTATGTATGGGATCTGAGC
CATCTACTGTTATATGATATACAAGACAAGCTGGAAACTTTGGTATATCC
ATATGTTAGAATATCCTCTAGTAATTGACTTCAAGTAGTATGGAGCGATT
TTGTTCACCTTGTCACGTCAATATTTAATTTGAAGGGAAAGTGCTGCGAG
ATCGGTTCGATAGCATGACGGGCTCGCGATAACTTACCGATTGACTTTAC
GGCTTGAACTACTCTGGTTTTATGTTTTTTAAACCAGACTACGGCAATAT
AGTATAGCAGTACGAGTACAGTATAGCTCTCGCGTCGCGCGTAATCGAGT
GAGCTTTCAATACGCTCCTTCCACCCAACCTCGCTCCTCATGCCTCCTAG
GTTATACTAATTATAATGCGTTTGACTCATTACACCTACTTCCTTCCCTG
CGCCTTGAGAACTCATGCCGGGGTACTCCAAGGTCTGCTGCTAGGCCATC
GCGGAGTCTAGCTGCTCTGAGGTTCTGTACGACCTCATCCGTGGCCTGAA
CCGGAGCCCCCCGCACCAAAAGATCCTTGTGTGAGTTCTTCGACTACTGT
ATAGACTACTGGTATTTATTGAGGCCTTGAGTTCTGCGCCGGTACGTGTA
CGCGCCACGCTCTCAAAAGTAAAATGTTGCTGGTATTGCGGGGTGACACT
CGCAGATACACGCTGTTTGTGCTCAGAAGTATCGCGTCGTGATTTGACCG
ACATTCCCTTTGCCACATATCCACCAGCGTGATTCTTCCTCGGCAGATAC
GCCCTCAAAAAGTTTCGCAATATCGCGAGACGGGGGATGACCTGCCACAG
CTTATCGCCGCGACCCCCACAGCCACCGCGACGTTGATGAACCTTTTACA
GGTAGGTGATGGATGAAAGGCCAACACAAAAAATAATGCCAATTCTATAC
TAATAATATTGTTAATAATATTCCGTAAAATGCTACGGAGTATTGATACT
TTACCGATACTTTGTTATGTACGTGGCACATAACTCAATTCAGAATGATA
AAATGGGCGAGAAGGCATTCATGAGTATGTCGGAAATTCGTGCGCCGATA
TGTTTCTATACTGTTTCCGTTGCAAAGGGAGCCCTTTTGCCCCTCTGCTG
CTTCCGCCCTTGTTTGTATCGTCGATCGTGGGTTGCTGCATGCACCTTGA
CTAGCCGCGAGTTTCGACCCTAAAGTGGTAAGAGTTAACGCGTGCACTCT
CACAGTCTCAAATTCTTTGACTTACAATACAGTCTTATTAATAGTAATAC
CTCCTTGGGTCGTGGTTTGACATTCTTCCCGCCAGATGTACCGCGAACGC
CAAGATATGTTCCTGCCTACGTTGCGACCGGTGCAGAAGCTTGCGGCGGC
ACATCAGCCAACCAAGGTGTGCGTGTGTAGCCTGGCCTCTTAAAAAAACC
TTCGTAGTGTGAACAATTTTAATACTTGTATAGAGTGCAGTATCATAGCT
ATAGCTCTAATAACTCAACTCTACCTGGTATCATTACACGTTTTACCAAA
GACTAATTGCGCCTGGCGCTGAAGAAATCACCTACTGCGGAAAGCGAGAA
CTTGGCAATACGATCACACGTTACATATTCCTATAAATAGAGTAGTTCTC
CGTTACGTAGAGTCTAAAGCACAAGCAGGGGGCCTCCCGGCATTCGTTTG
GAATTGCTCACGCCTGTTCTCCCTCCCCCCCCATTCATATGCCACAGGAT
GAGTGCAACGAGTCCAAATACTTGCAGCGCCTGGAGAGCCTTGAGAAAAT
ACTGATGCGCAAGGTGGCGGTAGAGGCGAAGAGCGAACTCGTGGCGAGGT
CAAGGATCGGCGCAGGACGTTCTGCGAGATCCTTGAAGGCCGTTAACCTT
CTTCTGAAAGAGTTATCAAAGGAATGAGGCTCTTGGTCTTTATGTTAGTG
ATATTTTAGTGAATGGCGGCTTTAGAGGGAATGTCCGGGAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig1115:43650..48590+

>mRNA_F-serratus_M_contig1115.1073.1 ID=mRNA_F-serratus_M_contig1115.1073.1|Name=mRNA_F-serratus_M_contig1115.1073.1|organism=Fucus serratus male|type=CDS|length=552bp|location=Sequence derived from alignment at F-serratus_M_contig1115:43650..48590+ (Fucus serratus male)
ATGAACCTTTTACAGATGAACCTTTTACAGATGTACCGCGAACGCCAAGA
TATGTTCCTGCCTACGTTGCGACCGGTGCAGAAGCTTGCGGCGGCACATC
AGCCAACCAAGATGTACCGCGAACGCCAAGATATGTTCCTGCCTACGTTG
CGACCGGTGCAGAAGCTTGCGGCGGCACATCAGCCAACCAAGGATGAGTG
CAACGAGTCCAAATACTTGCAGCGCCTGGAGAGCCTTGAGAAAATACTGA
TGCGCAAGGTGGCGGTAGAGGCGAAGAGCGAACTCGTGGCGAGGTCAAGG
ATCGGCGCAGGACGTTCTGCGAGATCCTTGAAGGCCGTTAACCTTCTTCT
GAAAGAGTTATCAAAGGAATGAGATGAGTGCAACGAGTCCAAATACTTGC
AGCGCCTGGAGAGCCTTGAGAAAATACTGATGCGCAAGGTGGCGGTAGAG
GCGAAGAGCGAACTCGTGGCGAGGTCAAGGATCGGCGCAGGACGTTCTGC
GAGATCCTTGAAGGCCGTTAACCTTCTTCTGAAAGAGTTATCAAAGGAAT
GA
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