mRNA_F-serratus_M_contig1114.1070.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1114.1070.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI) HSP 1 Score: 163 bits (413), Expect = 7.400e-47 Identity = 87/174 (50.00%), Postives = 107/174 (61.49%), Query Frame = 1
Query: 10 IGDGSCNSGTNNNEACGWDGGDCCECTCVVNPERDSSCGLSISCIDPDSGCADPR--LLQYINCTGTASSIGDGRCYTGNNNEACGWDGGDCCECTCTP-DCDSER--------GNGFFCLDPNSGCA---DPSLLKYTNCTGDVIYIGDGYCNTRNNNEACDWDGGDCCECTC 489
GDG C+ NNNE CG+DGGDCCECTCV + D SC + +CIDP + C D + + G S+G+G C NNNE CG+DGGDCCECTC P D D GNGF C+DPN+ C D +L NC D + +G+G+C+ NNNEAC +DGGDCCECTC
Sbjct: 61 FGDGWCDQ-ENNNEICGYDGGDCCECTCVNAWDDDYSCAANSACIDPSAPCVDDDDVTVDMVENCGYVGSVGNGWCDEENNNEGCGYDGGDCCECTCQPLDTDDGTDDYFQNGCGNGFACIDPNAPCVNDDDITLDIVENC--DSVAVGNGFCDMDNNNEACAYDGGDCCECTC 231
BLAST of mRNA_F-serratus_M_contig1114.1070.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE) HSP 1 Score: 154 bits (389), Expect = 1.380e-40 Identity = 88/190 (46.32%), Postives = 106/190 (55.79%), Query Frame = 1
Query: 10 IGDGSCNSGTNNNEACGWDGGDCCECTCVV------NPERD------SSCGLSISCIDPDSGCA--DPRLLQYINCTGTASSIGDGRCYTGNNNEACGWDGGDCCECTCT-PDCDSER------------GNGFFCLDPNSGCADPSLLKY---TNCTGDVIYIGDGYCNTRNNNEACDWDGGDCCECTC 489
+GDG C+ NNNE CG+DGGDCCECTCV +P D SS G +CIDP + C D + G +GDG C+ NNNE CG+DGGDCCECTC P D + G GF C+DP++ C D + +C D + IGDGYCN NNNEAC +DGGDCCECTC
Sbjct: 59 LGDGYCDQ-DNNNEICGYDGGDCCECTCVACKKHGQSPWDDDDDWLCSSGGSGFACIDPAAPCVEDDDITADMVENCGYVRGLGDGWCHEENNNELCGYDGGDCCECTCVAPPADDDWXXXXXXXXYGACGGGFACIDPSAACVDDDEVTVGMVESC--DTVSIGDGYCNMDNNNEACAYDGGDCCECTC 245
BLAST of mRNA_F-serratus_M_contig1114.1070.1 vs. uniprot
Match: A0A6H5KJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE) HSP 1 Score: 150 bits (378), Expect = 5.380e-39 Identity = 80/171 (46.78%), Postives = 105/171 (61.40%), Query Frame = 1
Query: 1 VGSIGDGSCNSGTNNNEACGWDGGDCCECTCVVNPE--RDSSCGLSISCIDPDSGCADPRLLQ--YINCTGTASSIGDGRCYTGNNNEACGWDGGDCCECTCTPDCDSERG-NGFFCLDPNSGCADPSLLK---YTNCTGDVIYIGDGYCNTRNNNEACDWDGGDCCECTC 489
V +G+G CN NN E C +D GDCC+CTC + + D SC + +C+DP++ C D + + + +C + GDG C NNNE CG+DGGDCCECTC D +E G F C+DP + C D + NC + Y+GDGYC+T NNNE CD+DGGDCCECTC
Sbjct: 142 VAGLGNGYCNE-ANNIEECDYDAGDCCQCTCGIESDDLSDFSC-VDFACVDPNAPCVDDDVTEGMFEDCF----NFGDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGCTEFACIDPTAPCVDDDDVTADALENCM--IEYLGDGYCDTYNNNEICDYDGGDCCECTC 304
BLAST of mRNA_F-serratus_M_contig1114.1070.1 vs. uniprot
Match: D7FSR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSR3_ECTSI) HSP 1 Score: 141 bits (355), Expect = 1.930e-38 Identity = 74/158 (46.84%), Postives = 97/158 (61.39%), Query Frame = 1
Query: 40 NNNEACGWDGGDCCECTCVVNPER--DSSCGLSISCIDPDSGCADPRLLQ--YINCTGTASSIGDGRCYTGNNNEACGWDGGDCCECTCTPDCDSERG-NGFFCLDPNSGCADPSLLK---YTNCTGDVIYIGDGYCNTRNNNEACDWDGGDCCECTC 489
NN E C +D GDCC+CTC + + D SC + +C+DP++ C D + + + +C + GDG C NNNE CG+DGGDCCECTC D +E G F C+DP + C D + NC + Y+GDGYC+T NN E CD+DGGDCCECTC
Sbjct: 5 NNIEECDYDAGDCCQCTCGIESDDLPDFSC-VDFACVDPNAPCVDDDVTEGMFEDCF----NFGDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGCTEFACIDPTAPCVDDDDVTADALENCM--MEYLGDGYCDTYNNIEICDYDGGDCCECTC 155
BLAST of mRNA_F-serratus_M_contig1114.1070.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI) HSP 1 Score: 143 bits (361), Expect = 5.140e-37 Identity = 85/178 (47.75%), Postives = 101/178 (56.74%), Query Frame = 1
Query: 10 IGDGSCNSGTNNNEACGWDGGDCCECTCVVNPERD------SSCGLSISCIDPDSGCADPRLLQYI---NCTGTASSIGDGRCYTGNNNEACGWDGGDCCECTCTPDCD------SERGNGFFCLDPNSGCADP---SLLKYTNCTGDVIYIGDGYCNTRNNNEACDWDGGDCCECTC 489
GDG C NNN CG+DGGDCCECTC NP D S G +CIDPD+ C D + NC S +G+G C NNNE CG+D GDCCECTC D S G+GF C+DP + C D ++ NC G V +GDG+C+ NNNE C +DGGDCCECTC
Sbjct: 29 FGDGYCQL-QNNNAECGYDGGDCCECTCQ-NPWGDDDEWFCSKDGYGFACIDPDAPCVDDDDITIEIAQNCV--TSDLGNGYCDEDNNNEICGYDFGDCCECTCVSPWDDDDWYCSSDGSGFACIDPAAPCVDDDDVTIDMVENC-GYVRGLGDGWCDDWNNNELCGYDGGDCCECTC 201
BLAST of mRNA_F-serratus_M_contig1114.1070.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI) HSP 1 Score: 139 bits (351), Expect = 3.830e-36 Identity = 79/176 (44.89%), Postives = 100/176 (56.82%), Query Frame = 1
Query: 10 IGDGSCNSGTNNNEACGWDGGDCCECTCVVNPERD------SSCGLSISCIDPDSGC-ADPRLLQYINCTGTASSIGDGRCYTGNNNEACGWDGGDCCECTCTPDCDSER--------GNGFFCLDPNSGCA-DPSLLKYTNCTGDVIYIGDGYCNTRNNNEACDWDGGDCCECTC 489
GDG C NNN CG+DGGDCCECTC NP+ S G +C+DPD+ C A+ + + +GDG C NNNE CG+DGGDCCECTC D + G GF C+DP++ C D + + + D + +GDGYC+ NNN AC +DGGDCCECTC
Sbjct: 36 YGDGYCTP-PNNNAECGYDGGDCCECTCQ-NPQGGDHHWICSKNGSGFACVDPDAPCYAEDGVTVEASQECDFWDLGDGWCDQVNNNELCGYDGGDCCECTCEVPTDDDWDNDLYVACGEGFACIDPSAPCVNDDDITVDVDESCDAVGMGDGYCDMDNNNAACAYDGGDCCECTC 209
BLAST of mRNA_F-serratus_M_contig1114.1070.1 vs. uniprot
Match: D8LEP6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI) HSP 1 Score: 136 bits (342), Expect = 1.630e-35 Identity = 79/181 (43.65%), Postives = 103/181 (56.91%), Query Frame = 1
Query: 10 IGDGSCNSGTNNNEACGWDGGDCCECTCVVNPERDSSCG--LSISCIDPDSGCADPRLL---QYINCTGTASSIGDGRCYTGNNNEACGWDGGDCCECTCTPD----------CDSERGNGFFCLDPNSGCADPSLLKYTNCTGDVI------YIGDGYCNTRNNNEACDWDGGDCCECTC 489
IG+G CN G NN E CG+DGGDCCECTC + + +CG +CIDPD+ C D + NC S IG+G C + NNE C +DGGDCCECTC P C + GF C+DP++ C D ++ T +++ IG+GYC+ NN+ C +DGGDCCECTC
Sbjct: 98 IGNGRCNMG-NNIEECGFDGGDCCECTCE---DGEYTCGQYYGYACIDPDATCVDDDAVTVDMMENCY-DPSRIGNGACDSLLNNEDCAYDGGDCCECTCDPSRYPWYDSGVGCQTGMYGGFACIDPDAPCVDDDIV-----TAEMMDLCSTGQIGNGYCDDSNNSPECAYDGGDCCECTC 268
BLAST of mRNA_F-serratus_M_contig1114.1070.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI) HSP 1 Score: 137 bits (344), Expect = 5.360e-35 Identity = 75/168 (44.64%), Postives = 98/168 (58.33%), Query Frame = 1
Query: 4 GSIGDGSCNSGTNNNEACGWDGGDCCECTCVVNPERDSSCGLSISCIDPDSGCADPR--LLQYINCTGTASSIGDGRCYTGNNNEACGWDGGDCCECTCTPDCDSERGNGFF-CLDPNSGCADPSLLK---YTNCTGDVIYIGDGYCNTRNNNEACDWDGGDCCECTC 489
G IGDG C+ NNNE C +DGGDCCECTC + + D C + +C+DP++ C D + I ++ IGDG C N C +DGGDCC CTC D + G +F C+DP + C D + + NC V IG+G+C+ NN EAC +DGGDCCECTC
Sbjct: 61 GGIGDGWCDE-DNNNELCAYDGGDCCECTCEGSEDDDWHC-RNFACVDPNAPCVDDDSVTIDMIENCSWSTGIGDGYCSENLNTPECAYDGGDCCSCTCESPYDDDWGCMWFACIDPEAACVDDDDITVDMFENCEYPVD-IGNGWCDEANNIEACGYDGGDCCECTC 225
BLAST of mRNA_F-serratus_M_contig1114.1070.1 vs. uniprot
Match: D8LEX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEX5_ECTSI) HSP 1 Score: 136 bits (342), Expect = 6.740e-35 Identity = 82/171 (47.95%), Postives = 96/171 (56.14%), Query Frame = 1
Query: 10 IGDGSCNSGTNNNEACGWDGGDCCECTCVVNP--ERDSSCGLSISCIDPDSGCADPRLLQYINCTGTASSI----GDGRCYTGNNNEACGWDGGDCCECTCTPDCDSERG---NGFFCLDPNSGCADPSLL--KYTNCTGDVIYIGDGYCNTRNNNEACDWDGGDCCECTC 489
GDG C+ NNNE CG+DGGDCCECTCVV+ +SSC +CIDP + CAD I S I GDG C T NN E CG+D GDCCECT + F C+DP + C D S+ + NC D +GDGYC NNNE CD+D GDCCE TC
Sbjct: 8 FGDGFCDD-YNNNEQCGYDGGDCCECTCVVSTLWSTESSC-TEFACIDPRAPCADD---DDITADAVESCIIDYLGDGICDTSNNIETCGYDSGDCCECTXXXXXXXXXXXSCSDFACVDPMASCFDESITVDMFENC--DAELLGDGYCQESNNNEICDYDFGDCCESTC 171
BLAST of mRNA_F-serratus_M_contig1114.1070.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE) HSP 1 Score: 135 bits (341), Expect = 3.550e-34 Identity = 80/177 (45.20%), Postives = 99/177 (55.93%), Query Frame = 1
Query: 10 IGDGSCNSGTNNNEACGWDGGDCCECTCVV----NPERDSSCGLS--ISCIDPDSGCAD--------PRLLQYINCTGTASSIGDGRCYTGNNNEACGWDGGDCCECTCTPDCDSERGNGFFCLDPNSGCADP---SLLKYTNCTGDVIYIGDGYCNTRNNNEACDWDGGDCCECTC 489
IGDG+C+ NN E C +DGGDCC CTC V + S CG S +CIDPD+ C + P +++ C G + DG C NNNE CG+DGGDCC CTC D GF C+DP++ CAD ++ NC V IGDG C+ NN E C +DGGDCC CTC
Sbjct: 104 IGDGNCDK-DNNTEECDYDGGDCCSCTCQVPDDGTGDDGSLCGESAVFACIDPDAPCVNDDDFTAFLPEVVKET-CGGNIVHLADGDCDQINNNEECGYDGGDCCFCTCLDDFYECGIRGFACIDPSAECADDDDVTVDTVENCG--VRSIGDGQCDLDNNREECHYDGGDCCSCTC 276 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1114.1070.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1114.1070.1 >prot_F-serratus_M_contig1114.1070.1 ID=prot_F-serratus_M_contig1114.1070.1|Name=mRNA_F-serratus_M_contig1114.1070.1|organism=Fucus serratus male|type=polypeptide|length=163bp VGSIGDGSCNSGTNNNEACGWDGGDCCECTCVVNPERDSSCGLSISCIDPback to top mRNA from alignment at F-serratus_M_contig1114:110844..111332+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1114.1070.1 ID=mRNA_F-serratus_M_contig1114.1070.1|Name=mRNA_F-serratus_M_contig1114.1070.1|organism=Fucus serratus male|type=mRNA|length=489bp|location=Sequence derived from alignment at F-serratus_M_contig1114:110844..111332+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1114:110844..111332+ >mRNA_F-serratus_M_contig1114.1070.1 ID=mRNA_F-serratus_M_contig1114.1070.1|Name=mRNA_F-serratus_M_contig1114.1070.1|organism=Fucus serratus male|type=CDS|length=978bp|location=Sequence derived from alignment at F-serratus_M_contig1114:110844..111332+ (Fucus serratus male)back to top |