mRNA_F-serratus_M_contig1112.1062.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1112.1062.1
Unique NamemRNA_F-serratus_M_contig1112.1062.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1112.1062.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 281 bits (719), Expect = 1.270e-80
Identity = 188/577 (32.58%), Postives = 254/577 (44.02%), Query Frame = 1
Query:   13 VLMFPDASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRRSQLCWPTVDKESFETLSAFQRVPYWQGDSLNIVFEPRNFAYIFRPQSSGVMLSKASSQRLAGWRECMSLFTYVIQHIPGEDNHWGDLLLRW----------------RVLDSEIP----------LVRA-----NAINTDGL--------------VDG-------------------------------------------------------------------------------------------------------------GYKHVLVLMDDVSRFVWLKKAVLYSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGMANVSWSHGTLERMNREVVKTFRAVHSERRRPPSEWPLALEAVQWALNSVYRERMGTMPLHMMTGRPLATVMSVLAGEDGDAWTVEELEVSCEQMQSWAAGCVRGQENLRRHVVKRVREQRERVREVSGRGYLQVFEVDDYVLVARVRKPVRVPKLVQTWIGPWRVVPGESKHVRVVKYFVPEETKNVH 1281
            VLMFPDAS+  WG ++TQVP+ E+   +   DMSHEPL FLSG FR SQL W TVDKE F  +S F+R+ Y     ++I  + RN AYIF P++    + K ++QRL  W+  +  + Y IQHI GE N WGDLL RW                   D  +P           VRA     NA  TD L              +DG                                                                                                             GY ++LV+MDD+S F W++     +  + A+ +   C +  VP+ + SD  THF   VM  +   L V   F +AN  WS+GT ERM RE+V+T +AV  ERRR   +W   + AVQWALN+ YRER  + P H+M GR   T  S LA   G+AW ++ L+ +  +++      ++ Q  L + V ++V   R R R  + RG L  F V DYV+VARVR+    PKL  TW GPWRVV    KHV  V+  V  + ++VH
Sbjct:  972 VLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPEACISTVPKTTAQRLENWKAVLGQYDYTIQHISGERNCWGDLLSRWVNVPAVSNRSAAVFMPSTPDCNLPSKNAIREVQQTVRASVGDTNACFTDTLGRVAPDDEGLFRVMIDGRKVLWIPDTARDMQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDAT--KLKQQVQNVIQTQAVLHKQVQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVH 1546          
BLAST of mRNA_F-serratus_M_contig1112.1062.1 vs. uniprot
Match: A0A6H5JCX8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX8_9PHAE)

HSP 1 Score: 222 bits (566), Expect = 6.230e-62
Identity = 157/513 (30.60%), Postives = 216/513 (42.11%), Query Frame = 1
Query:   13 VLMFPDASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRRSQLCWPTVDKESFETLSAFQRVPYWQGDSLNIVFEPRNFAYIFRPQSSGVMLSKASSQRLAGWRECMSLFTYVIQHIPGEDNHWGDLLLRW----------------RVLDSEIP----------LVRA-----NAINTDGL--------------VDG-------------------------------------------------------------------------------------------------------------GYKHVLVLMDDVSRFVWLKKAVLYSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGMANVSWSHGTLERMNREVVKTFRAVHSERRRPPSEWPLALEAVQWALNSVYRERMGTMPLHMMTGRPLATVMSVLAGEDGDAWTVEELEVSCEQMQSWAAGCVRGQENLRRHVVKRVREQRERVR 1089
            VLMFPDAS+  WG ++TQVP+ E+   +   DMSHEPL FLSG FR SQL W TVDKE F  +S F+R+ Y     ++I  + RN AYIF P++    + K ++QRL  W+  +  + Y IQHI GE N WGDLL RW                   D  +P           VRA     NA  TD L              +DG                                                                                                             GY ++LV+MDD+S F W++     +  + A+ +   C +  VP+ + SD  THF   VM  +   L V   F +AN  WS+GT ERM RE+V+T +AV  ERRR   +W   + AVQWALN+ YRER  + P H+M GR   T  S LA   G+AW ++ L+ +  +++      ++ Q  L + V ++V   R R R
Sbjct:  196 VLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPEACISTVPKTTAQRLENWKAVLGQYDYTIQHISGERNCWGDLLSRWVNVPAVSNRSAAVFMPSTPDCNLPSKNAIREVQQTVRASVGDTNACFTDTLGRVAPDDEGLFRVMIDGRKVLWIPDTARDMQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDAT--KLKQQVQNVIQTQAVLHKQVQQKVDHNRARQR 706          
BLAST of mRNA_F-serratus_M_contig1112.1062.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 3.490e-56
Identity = 109/276 (39.49%), Postives = 157/276 (56.88%), Query Frame = 1
Query:  457 RANAINTDGLVDG-GYKHVLVLMDDVSRFVWLKKAVLYSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGMANVSWSHGTLERMNREVVKTFRAVHSERRRPPSEWPLALEAVQWALNSVYRERMGTMPLHMMTGRPLATVMSVLAGEDGDAWTVEELEVSCEQMQSWAAGCVRGQENLRRHVVKRVREQRERVREVSGRGYLQVFEVDDYVLVARVRKPVRVPKLVQTWIGPWRVVPGESKHVRVVKYFVPEETKNVH 1281
            ++  +  DGL +  GY ++LV+MDD+S F W++     +  + A+ +   C +  VP+ + SD  THF   VM  +   L V   F +AN  WS+GT ERM REVV+T +AV  ERRR   +W   + AVQWALN+ YRER  + P H+M GR   T  S LA   G+AW ++ L+ +  +++      ++ Q  L + + ++V   R R R  + RG L  F V DYV+VARVR+    PKL  TW GPWRVV    KHV  V+  V  + ++VH
Sbjct:   50 KSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREVVRTMKAVLQERRRNLRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDAT--KLKQQVQNVIQTQAVLHKQIQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVH 323          
BLAST of mRNA_F-serratus_M_contig1112.1062.1 vs. uniprot
Match: W4FWF5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWF5_9STRA)

HSP 1 Score: 195 bits (495), Expect = 4.670e-53
Identity = 137/433 (31.64%), Postives = 204/433 (47.11%), Query Frame = 1
Query:    1 DDCHVLMFPDASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRRSQLCWPTVDKESFETLSAFQRVPYW--QGDSLNIVFEPRNFAYIFRPQSSGVMLSKASSQRLAGWRECMSLFTYVIQHIPGEDNHWGDLLLRWRVLDSEIPLVRANAINTDGLVDGGYKHVLVLMDDVSRFVWLKKAVLYSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGMANVSWSHGTLERMNREVVKTFRAVHSERRRPPSEWPLALEAVQWALNSVYRERMGTM-PLHMMTGRPLATVMSVLAGEDGDAWTVEELEVSCEQMQSWAAGCVRGQENLRRHVVKR---VREQRERVREVSGRGYLQVFEVDDYVLVARVRKPVRVPKLVQTWIGPWRVVPGESKHVRVVKYFVPEETKNVH 1281
            +D  V +F DAS+LFWG   T+VP   L   L   D  H+PLAF+SG F  +   WP V+KE++  + + +R+ Y   +     +  + RN  YIF P  S   ++K  + +L  W   MS F Y I+ + G+ N WGDLL RW        L+  + ++   +   G K VLV+ +D+S FV L  A        A+ +     +F     + SDGG+HF  +V+  +   +   HH   A   W++GT+E +NR V++  +A+ SE +    EWP  L  VQ ALN    +R+G + P+   TG P  T +S         +T   L  +C   Q          E + R+V  R   +R+Q    R+   +     F V D+VLV  V    R  KL   W GP +V    + HV   +  VP     VH
Sbjct:   27 EDMTVCVFTDASDLFWGAVATEVPPANL--DLPLEDQRHQPLAFISGSFSGASARWPIVEKEAYAVVESCKRLDYLVVRPGGFRLFTDHRNLVYIFNPSGSNANMAKYQADKLQRWSLVMSTFPYTIECVSGDANVWGDLLSRWCSAPKPNELIHFDWLSMP-MAKSGQKQVLVVKNDMSGFVQLFAAESADAAATAQCLMTWFTTFGCVDTWVSDGGSHFKNEVIEKVRKLVGAHHHITSAYSPWANGTVEVVNRLVLRAVKALLSEMKLNADEWPHVLPLVQAALNHQPADRLGGIAPVTAFTGLPAKTPLSGF-------YTSRTLGAAC---QKHVTDLQLALEEMHRNVAVRSDKLRQQARGRRDRKSQVKFAGFSVGDFVLVGSVVN--RPTKLALHWRGPCQVTRVITDHVMETQQLVPPYEVTVH 444          
BLAST of mRNA_F-serratus_M_contig1112.1062.1 vs. uniprot
Match: A0A6G0WP84_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WP84_9STRA)

HSP 1 Score: 184 bits (466), Expect = 2.060e-47
Identity = 139/436 (31.88%), Postives = 209/436 (47.94%), Query Frame = 1
Query:    4 DCHVLMFPDASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRRSQLCWPTVDKESFETLSAFQRVPYW--QGDSLNIVFEPRNFAYIFRPQSSGVMLSKASSQRLAGWRECMSLFTYVIQHIPGEDNHWGDLLLRWRVLDSEIPLVRANAINTDGLVDGGYKHVLVL---MDDVSRFVWLKKAVLYSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGMANVSWSHGTLERMNREVVKTFRAVHSERRRPPSEWPLALEAVQWALNSVYRERMG-TMPLHMMTGRPLATVMS-VLAGEDGDAWTVEELEVSCEQMQSWAAGCVRGQENLRRHVVKRVREQRERVR--EVSGRGY-LQVFEVDDYVLVARVRKPVRVPKLVQTWIGPWRVVPGESKHVRVVKYFVPEETKNVH 1281
            D  V ++ DAS+ FWG   TQVP  +L   L  ++  HEPLAFLSG FR +   WP V+KE+F  +   +R+ Y   +     +  + RN  Y+F P  +   ++K  + +L  W   M+ F Y I+ + GE+N W DLL RW    S   + RA  +         YK  LV      D+S FV L  +   +    A  + +  + F V K + SD G+HF  +V+  M       HHF   +  W++GT+E +NR +V+T +A+ SE R   +EWP  L  VQ ALN    +R+G   P+   TG      ++ ++  ++ D  T++ ++    +M  + A      E + + V      +R + R      RG  L  F + D+VLVAR  K     KL   W GP RVV   S H+  V   VP     +H
Sbjct:  322 DKMVCLYTDASDGFWGAIATQVPLDDLE--LVASEQRHEPLAFLSGAFRGASERWPIVEKEAFAVVELCKRLEYLLIRPGGFRLFTDHRNLVYMFNPLGASPNMAKYQAHKLQRWSLTMTTFPYAIECVAGEENLWADLLSRW---GSPSRVARAAKM---------YKLALVSPLQSRDMSGFVRLHASSTATAAETAAALMEWFSLFGVVKTWVSDCGSHFKNEVIDAMRRMFGSHHHFVTPHCPWANGTVEVVNRLIVRTLKALCSEMRLKATEWPSLLPLVQSALNQQPADRLGGEAPVKAFTGLGATPPLTGIVRADEADPKTIDWVK---SEMAKYMADLAIALEEMHKEVKATADRKRAKARASRTKQRGVKLTKFALGDFVLVARALK--HPGKLTLRWKGPCRVVRVLSHHLMEVVQLVPPRETTLH 738          
BLAST of mRNA_F-serratus_M_contig1112.1062.1 vs. uniprot
Match: W4FJD1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FJD1_9STRA)

HSP 1 Score: 149 bits (377), Expect = 1.250e-35
Identity = 103/334 (30.84%), Postives = 158/334 (47.31%), Query Frame = 1
Query:    1 DDCHVLMFPDASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRRSQLCWPTVDKESFETLSAFQRVPYW--QGDSLNIVFEPRNFAYIFRPQSSGVMLSKASSQRLAGWRECMSLFTYVIQHIPGEDNHWGDLLLRWRVLDSEIPLVRANAINTDGLVDGGYKHVLVLMDDVSRFVWLKKAVLYSMEVA-----------------ARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGMANVSWSHGTLERMNREVVKTFRAVHSERRRPPSEWPLALEAVQWALNSVYRERMGTM-PLHMMTG----RPLATVM 930
            +D  V +F DA +LFWG   TQVP  +L   L      H+PLAF+SG F  +   WP V+KE++  + + +R+ Y   +     +  + RN  YIF P  S   ++K  + +L  W   MS F Y I+ + G+ N WGDLL RW  + ++ P+      N   L+     HV+  +  V  F W   A +  ++ +                 + F         +P     DGG+HF  +V+  M   +   HH   A   W++GT+E +NR V++  +A+ SE +    EWP  L  VQ ALN    +R+G + P+   TG     PLA V+
Sbjct:  284 EDMTVCVFMDARDLFWGAVATQVPPADL--DLPLEVQRHQPLAFISGSFSGASARWPIVEKEAYAVVESCKRLDYLVVRPGGFRLFTDHRNLMYIFNPSGSNANMAKYQADKLQRWSLVMSTFPYTIECVSGDTNVWGDLLSRWGSVPADQPVA-----NVRKLI-----HVVSPLQQVD-FKWPTAATISGIQRSTMEGGGTPPNGVDWDDDSHFYVDPDGRIWIP----DDGGSHFKNEVIEKMRKLVGAHHHITTAYSPWANGTVEVVNRLVLRAVKALLSEMKLNADEWPHVLPLVQGALNHQPADRLGGIAPVTAFTGLSAKAPLAGVV 600          
BLAST of mRNA_F-serratus_M_contig1112.1062.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 1.060e-34
Identity = 92/261 (35.25%), Postives = 140/261 (53.64%), Query Frame = 1
Query:  469 INTDGL-VDGGYKHVLVLMDDVSRFVWLKKAVLYSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGMANVSWSHGTLERMNREVVKTFRAVHSERRRPPSEWPLALEAVQWALNSVYRERMGTMPLHMMTGRPLATVMSVLAGEDGDAWTVEELEVSCEQMQSWAAGCVRGQENLRRHVVKRVREQRERVREVSGRGYLQVFEVDDYVLVARVRKPVRVPKLVQTWIGPWRVVPGESKHVRVVK 1248
            +  DGL  + G+K++LV+MDD+S +VWL+     +  + A+ +   C    VP+ + SD  +HF   +M  + + L V  +F +AN  WS+GT ERM REVV+T +A+  E R    +W   + AVQWALN+ +RER G+ P H+M GR   T +S LA   G  W V+ L+    +++      V  Q +L + V+ +V+  R + R  +  G L  F V DYV+VA  R  V          G   +V GE + V V +
Sbjct: 1379 LGDDGLDEEEGFKYILVMMDDMSNWVWLEPTGACTACLTAQHLLTWCKILGVPEVWVSDTASHFKNHMMAALETALGVDRNFSVANSPWSNGTCERMMREVVRTLKAMIQEERGRTRDWVDLVPAVQWALNTAFRERYGSTPYHVMFGRAPRTALSTLASSTGAEWKVDVLDEKSLRLK--VQHVVEAQRHLHKEVLDKVQASRSKHRASARVGSLPDFVVGDYVIVAAERLHV---------YGVQNIVSGEVRDVHVAR 1628          
BLAST of mRNA_F-serratus_M_contig1112.1062.1 vs. uniprot
Match: A0A6G0WRF7_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WRF7_9STRA)

HSP 1 Score: 118 bits (295), Expect = 5.720e-26
Identity = 84/271 (31.00%), Postives = 142/271 (52.40%), Query Frame = 1
Query:  496 GYKHVLVLMDDVSRFVWLKKAVLYSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGMANVSWSHGTLERMNREVVKTFRAVHSERRRPPSEWPLALEAVQWALNSVYRERMGTM-PLHMMTGRPLATVMSVLAGE-------DGDAWTVEELEVSCEQMQSWAAGCVRGQENLRRHVVKRVREQRERVREV-SGRGYLQVFEVDDYVLVARVRKPVRVPKLVQTWIGPWRVVPGESKHVRVVKYFVPEETKNVH 1281
            G K+VLVL DD++ FV L      + +V    + +  A F VP+ + SDGGTHF   VM+ ++SRL+  H+  +A+  W +G++ER+NR+++   RA+ +E R   +EW   L  VQ  +N    E +G + P+   TG    T ++V+ G        DG    + EL +    +++      +  + L + ++ R R  + R   + +    L V E  DYVL +RV +    PKL+ TWIGP+RV+     +  V+++ +  +T+  H
Sbjct:    7 GSKYVLVLKDDLTHFVKLVACDSPTSQVTVDAIMEWSALFSVPQVWISDGGTHFKNTVMKELASRLKAQHNIVLAHCPWRNGSVERVNRDILSVMRAMLAESRLNETEWDYLLPVVQANMNQTPTESLGGISPMFAYTGLEPTTPLNVVVGRVNRKLHTDG----LHELNMEKTSIKNAMRNLNQSLQELHKKILDRKRAAQNRNMLLKTNTSELNVSE-GDYVLWSRVDENAHYPKLLVTWIGPYRVLEC-LPYSCVIEHLLTGKTQEAH 271          
BLAST of mRNA_F-serratus_M_contig1112.1062.1 vs. uniprot
Match: A0A6G0W3N8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W3N8_9STRA)

HSP 1 Score: 113 bits (283), Expect = 2.690e-23
Identity = 55/140 (39.29%), Postives = 81/140 (57.86%), Query Frame = 1
Query:   13 VLMFPDASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRRSQLCWPTVDKESFETLSAFQRVPYW--QGDSLNIVFEPRNFAYIFRPQSSGVMLSKASSQRLAGWRECMSLFTYVIQHIPGEDNHWGDLLLRW 426
            V +FPDAS  FWG  +TQVP  +L   LS     HEPLAFLSG FR SQ+ W  ++KE+F  +   +R+ +   + +   +  + RN  +++ P S    +++ +++++  W   M  F Y I HI GEDN W DLL RW
Sbjct:   59 VCVFPDASLRFWGAIVTQVPMNQL--SLSIDSQDHEPLAFLSGPFRGSQMAWSIIEKEAFSIVETCKRMDFLLLRPNGFKLYTDHRNLTFLYDPHSCSRDIARYTAEKVQRWGLVMMGFNYTIHHIDGEDNVWADLLSRW 196          
BLAST of mRNA_F-serratus_M_contig1112.1062.1 vs. uniprot
Match: A0A6G0WUU6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUU6_9STRA)

HSP 1 Score: 113 bits (283), Expect = 2.890e-23
Identity = 55/140 (39.29%), Postives = 81/140 (57.86%), Query Frame = 1
Query:   13 VLMFPDASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRRSQLCWPTVDKESFETLSAFQRVPYW--QGDSLNIVFEPRNFAYIFRPQSSGVMLSKASSQRLAGWRECMSLFTYVIQHIPGEDNHWGDLLLRW 426
            V +FPDAS  FWG  +TQVP  +L   LS     HEPLAFLSG FR SQ+ W  ++KE+F  +   +R+ +   + +   +  + RN  +++ P S    +++ +++++  W   M  F Y I HI GEDN W DLL RW
Sbjct:  376 VCVFPDASLRFWGAIVTQVPMNQL--SLSIDSQDHEPLAFLSGPFRGSQMAWSIIEKEAFSIVETCKRMDFLLLRPNGFKLYTDHRNLTFLYDPHSCSRDIARYTAEKVQRWGLVMMGFNYTIHHIDGEDNVWADLLSRW 513          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1112.1062.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7F6_9PHAE1.270e-8032.58Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCX8_9PHAE6.230e-6230.60Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JVS6_9PHAE3.490e-5639.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W4FWF5_9STRA4.670e-5331.64Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6G0WP84_9STRA2.060e-4731.88Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W4FJD1_9STRA1.250e-3530.84Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6H5K5A5_9PHAE1.060e-3435.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6G0WRF7_9STRA5.720e-2631.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A6G0W3N8_9STRA2.690e-2339.29Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6G0WUU6_9STRA2.890e-2339.29Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1112contigF-serratus_M_contig1112:292025..293581 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score146.7
Seed ortholog evalue2.4e-32
Seed eggNOG ortholog164328.Phyra85588
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QEWS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size1281
Cds size1263
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1112.1062.1prot_F-serratus_M_contig1112.1062.1Fucus serratus malepolypeptideF-serratus_M_contig1112 292025..293563 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928998.5495265-CDS-F-serratus_M_contig1112:292024..2928401622928998.5495265-CDS-F-serratus_M_contig1112:292024..292840Fucus serratus maleCDSF-serratus_M_contig1112 292025..292840 -
1690962662.6148527-CDS-F-serratus_M_contig1112:292024..2928401690962662.6148527-CDS-F-serratus_M_contig1112:292024..292840Fucus serratus maleCDSF-serratus_M_contig1112 292025..292840 -
1622928998.580231-CDS-F-serratus_M_contig1112:293116..2935631622928998.580231-CDS-F-serratus_M_contig1112:293116..293563Fucus serratus maleCDSF-serratus_M_contig1112 293117..293563 -
1690962662.6249835-CDS-F-serratus_M_contig1112:293116..2935631690962662.6249835-CDS-F-serratus_M_contig1112:293116..293563Fucus serratus maleCDSF-serratus_M_contig1112 293117..293563 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928998.5909576-UTR-F-serratus_M_contig1112:293563..2935811622928998.5909576-UTR-F-serratus_M_contig1112:293563..293581Fucus serratus maleUTRF-serratus_M_contig1112 293564..293581 -
1690962662.6339705-UTR-F-serratus_M_contig1112:293563..2935811690962662.6339705-UTR-F-serratus_M_contig1112:293563..293581Fucus serratus maleUTRF-serratus_M_contig1112 293564..293581 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1112.1062.1

>prot_F-serratus_M_contig1112.1062.1 ID=prot_F-serratus_M_contig1112.1062.1|Name=mRNA_F-serratus_M_contig1112.1062.1|organism=Fucus serratus male|type=polypeptide|length=421bp
MFPDASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRRSQLCW
PTVDKESFETLSAFQRVPYWQGDSLNIVFEPRNFAYIFRPQSSGVMLSKA
SSQRLAGWRECMSLFTYVIQHIPGEDNHWGDLLLRWRVLDSEIPLVRANA
INTDGLVDGGYKHVLVLMDDVSRFVWLKKAVLYSMEVAARFVQKSCASFE
VPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGMANVSWSHGTLERMNREV
VKTFRAVHSERRRPPSEWPLALEAVQWALNSVYRERMGTMPLHMMTGRPL
ATVMSVLAGEDGDAWTVEELEVSCEQMQSWAAGCVRGQENLRRHVVKRVR
EQRERVREVSGRGYLQVFEVDDYVLVARVRKPVRVPKLVQTWIGPWRVVP
GESKHVRVVKYFVPEETKNVH
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mRNA from alignment at F-serratus_M_contig1112:292025..293581-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1112.1062.1 ID=mRNA_F-serratus_M_contig1112.1062.1|Name=mRNA_F-serratus_M_contig1112.1062.1|organism=Fucus serratus male|type=mRNA|length=1557bp|location=Sequence derived from alignment at F-serratus_M_contig1112:292025..293581- (Fucus serratus male)
GACGACTGCCACGTGTTAATGTTCCCTGATGCGAGCAATTTGTTTTGGGG GTGTTACTTGACTCAGGTGCCGAAAAAGGAGCTAGTGGCAGGGTTATCTT TCACGGACATGAGTCACGAGCCCCTCGCTTTCCTGAGTGGTATGTTTCGG AGGTCACAGCTGTGTTGGCCAACGGTGGACAAGGAATCCTTCGAAACTCT TAGCGCTTTTCAGCGCGTACCGTACTGGCAGGGTGATAGCTTGAACATTG TTTTCGAACCTCGCAACTTCGCGTACATCTTCCGCCCGCAATCGAGTGGC GTGATGCTGAGCAAAGCTTCGTCGCAACGCCTCGCCGGGTGGCGTGAGTG CATGAGCCTGTTCACCTACGTGATCCAGCACATCCCCGGGGAGGATAATC ATTGGGGTGATCTATTGTTGAGGTGGCGGGTGCTGGATTCTGAAATCCCT CTGGTGCGCGCGAATGTTATTGCTGTGATTGTTCCGCCGACTGGCTTCAG TCAGATGCCGTCAAAAGACGAAATCAAGTACAGGCAAGACGCGGTGGCGC GTGGTCCAGTTGAGGTGGTGACCCCGTTGGGACATATGGAGAAGGATATA GCGAAATTCGTCCGCGAATGTCTACCCTACACCGATTCGAAAGCGGGCAA TGCTATGTCACGTCCGCTGGGTGATCTAGTGCATGGAACGGAAGTGGGTG ACGTGCTCCACCTCGACTACCTCAGTCTGGGCGAAAACGAGGCCATCAAT ACGGATGGTTTGGTCGATGGGGGCTATAAGCATGTGCTAGTGTTGATGGA TGACGTGAGTCGGTTCGTCTGGCTGAAAAAAGCGGTATTATATTCGATGG AGGTGGCGGCGCGTTTCGTGCAGAAGTCGTGTGCCTCGTTTGAGGTGCCC AAGGCGTTCGCTAGTGATGGTGGGACGCATTTTACCGGGCAAGTGATGCG CATGATGTCGTCCCGATTGAGGGTGGTTCACCATTTTGGGATGGCGAATG TTTCGTGGTCGCATGGGACACTAGAACGGATGAACCGTGAAGTCGTAAAG ACGTTTCGTGCGGTCCACAGCGAAAGACGTCGGCCTCCGAGCGAGTGGCC GTTGGCGTTGGAAGCTGTGCAGTGGGCTCTCAATTCGGTGTACCGGGAAC GCATGGGGACGATGCCGTTACATATGATGACGGGACGACCCCTTGCGACG GTAATGTCGGTGCTTGCAGGGGAAGACGGTGACGCGTGGACTGTGGAGGA GCTAGAAGTGTCGTGCGAGCAAATGCAGTCCTGGGCTGCTGGTTGTGTGC GAGGGCAGGAAAACTTACGGCGTCATGTGGTGAAGCGCGTTCGTGAGCAG CGTGAGCGTGTACGAGAGGTGAGCGGTCGTGGATACTTGCAGGTGTTCGA GGTTGATGACTATGTCTTGGTGGCTCGGGTGAGGAAACCGGTTCGTGTGC CTAAGCTCGTACAGACCTGGATTGGACCGTGGCGTGTGGTGCCTGGAGAA TCAAAGCATGTTCGTGTAGTGAAATATTTCGTCCCGGAGGAAACCAAGAA CGTGCAC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1112:292025..293581-

>mRNA_F-serratus_M_contig1112.1062.1 ID=mRNA_F-serratus_M_contig1112.1062.1|Name=mRNA_F-serratus_M_contig1112.1062.1|organism=Fucus serratus male|type=CDS|length=2526bp|location=Sequence derived from alignment at F-serratus_M_contig1112:292025..293581- (Fucus serratus male)
ATGTTCCCTGATGCGAGCAATTTGTTTTGGGGGTGTTACTTGACTCAGGT
GCCGAAAAAGGAGCTAGTGGCAGGGTTATCTTTCACGGACATGAGTCACG
AGCCCCTCGCTTTCCTGAGTGGTATGTTTCGGAGGTCACAGCTGTGTTGG
CCAACGGTGGACAAGGAATCCTTCGAAACTCTTAGCGCTTTTCAGCGCGT
ACCGTACTGGCAGGGTGATAGCTTGAACATTGTTTTCGAACCTCGCAACT
TCGCGTACATCTTCCGCCCGCAATCGAGTGGCGTGATGCTGAGCAAAGCT
TCGTCGCAACGCCTCGCCGGGTGGCGTGAGTGCATGAGCCTGTTCACCTA
CGTGATCCAGCACATCCCCGGGGAGGATAATCATTGGGGTGATCTATTGT
TGAGGTGGCGGGTGCTGGATTCTGAAATCCCTCTGGTGCGCGCGAATATG
TTCCCTGATGCGAGCAATTTGTTTTGGGGGTGTTACTTGACTCAGGTGCC
GAAAAAGGAGCTAGTGGCAGGGTTATCTTTCACGGACATGAGTCACGAGC
CCCTCGCTTTCCTGAGTGGTATGTTTCGGAGGTCACAGCTGTGTTGGCCA
ACGGTGGACAAGGAATCCTTCGAAACTCTTAGCGCTTTTCAGCGCGTACC
GTACTGGCAGGGTGATAGCTTGAACATTGTTTTCGAACCTCGCAACTTCG
CGTACATCTTCCGCCCGCAATCGAGTGGCGTGATGCTGAGCAAAGCTTCG
TCGCAACGCCTCGCCGGGTGGCGTGAGTGCATGAGCCTGTTCACCTACGT
GATCCAGCACATCCCCGGGGAGGATAATCATTGGGGTGATCTATTGTTGA
GGTGGCGGGTGCTGGATTCTGAAATCCCTCTGGTGCGCGCGAATGCCATC
AATACGGATGGTTTGGTCGATGGGGGCTATAAGCATGTGCTAGTGTTGAT
GGATGACGTGAGTCGGTTCGTCTGGCTGAAAAAAGCGGTATTATATTCGA
TGGAGGTGGCGGCGCGTTTCGTGCAGAAGTCGTGTGCCTCGTTTGAGGTG
CCCAAGGCGTTCGCTAGTGATGGTGGGACGCATTTTACCGGGCAAGTGAT
GCGCATGATGTCGTCCCGATTGAGGGTGGTTCACCATTTTGGGATGGCGA
ATGTTTCGTGGTCGCATGGGACACTAGAACGGATGAACCGTGAAGTCGTA
AAGACGTTTCGTGCGGTCCACAGCGAAAGACGTCGGCCTCCGAGCGAGTG
GCCGTTGGCGTTGGAAGCTGTGCAGTGGGCTCTCAATTCGGTGTACCGGG
AACGCATGGGGACGATGCCGTTACATATGATGACGGGACGACCCCTTGCG
ACGGTAATGTCGGTGCTTGCAGGGGAAGACGGTGACGCGTGGACTGTGGA
GGAGCTAGAAGTGTCGTGCGAGCAAATGCAGTCCTGGGCTGCTGGTTGTG
TGCGAGGGCAGGAAAACTTACGGCGTCATGTGGTGAAGCGCGTTCGTGAG
CAGCGTGAGCGTGTACGAGAGGTGAGCGGTCGTGGATACTTGCAGGTGTT
CGAGGTTGATGACTATGTCTTGGTGGCTCGGGTGAGGAAACCGGTTCGTG
TGCCTAAGCTCGTACAGACCTGGATTGGACCGTGGCGTGTGGTGCCTGGA
GAATCAAAGCATGTTCGTGTAGTGAAATATTTCGTCCCGGAGGAAACCAA
GAACGTGCACGCCATCAATACGGATGGTTTGGTCGATGGGGGCTATAAGC
ATGTGCTAGTGTTGATGGATGACGTGAGTCGGTTCGTCTGGCTGAAAAAA
GCGGTATTATATTCGATGGAGGTGGCGGCGCGTTTCGTGCAGAAGTCGTG
TGCCTCGTTTGAGGTGCCCAAGGCGTTCGCTAGTGATGGTGGGACGCATT
TTACCGGGCAAGTGATGCGCATGATGTCGTCCCGATTGAGGGTGGTTCAC
CATTTTGGGATGGCGAATGTTTCGTGGTCGCATGGGACACTAGAACGGAT
GAACCGTGAAGTCGTAAAGACGTTTCGTGCGGTCCACAGCGAAAGACGTC
GGCCTCCGAGCGAGTGGCCGTTGGCGTTGGAAGCTGTGCAGTGGGCTCTC
AATTCGGTGTACCGGGAACGCATGGGGACGATGCCGTTACATATGATGAC
GGGACGACCCCTTGCGACGGTAATGTCGGTGCTTGCAGGGGAAGACGGTG
ACGCGTGGACTGTGGAGGAGCTAGAAGTGTCGTGCGAGCAAATGCAGTCC
TGGGCTGCTGGTTGTGTGCGAGGGCAGGAAAACTTACGGCGTCATGTGGT
GAAGCGCGTTCGTGAGCAGCGTGAGCGTGTACGAGAGGTGAGCGGTCGTG
GATACTTGCAGGTGTTCGAGGTTGATGACTATGTCTTGGTGGCTCGGGTG
AGGAAACCGGTTCGTGTGCCTAAGCTCGTACAGACCTGGATTGGACCGTG
GCGTGTGGTGCCTGGAGAATCAAAGCATGTTCGTGTAGTGAAATATTTCG
TCCCGGAGGAAACCAAGAACGTGCAC
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