mRNA_F-serratus_M_contig111.1049.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig111.1049.1
Unique NamemRNA_F-serratus_M_contig111.1049.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig111.1049.1 vs. uniprot
Match: D7FXW1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW1_ECTSI)

HSP 1 Score: 410 bits (1053), Expect = 4.140e-138
Identity = 217/351 (61.82%), Postives = 264/351 (75.21%), Query Frame = 2
Query:   50 VRPTGELSFEHVQGKTSITTAYSRYPLKFVSATRACQGGCAWVYFLGYGGGAVCGDNVTVRCHVNQDCTAALTTQGSTKVYKRTARTRDSRVLGGEGD-CERASQSLLARVCSGALLAMVPDPVTCFEDASFRQHQRFLLERGASLVLVDWITSGRMSRGEGWAFERLESRNEIMTQSLAEAERQDQ--AGAWEPLVLDSLILEEIPGLSIRDRMLGMNVVGVVILVGLRVEKAVSALLQREARRRKRFPSGLEDPTKDAKPQRRSGDKTGQTKGEVEQEDVKKILTGKDKGRVLSSVSPLEGSGGEARCRGLVCRFAAERTEDCRTMLHEILLPLKHELGGRSPYSREGG 1093
            +R TGEL FE VQGKT+ TTAY+RYP+KFVSATRA  GGC+WVY LGYGGGAVCGD VT+ CHV ++ TAALTTQGSTKV+KR +++  +     E D C RASQ+LL+RV   ALL +VPDPVTCFE++SF+QHQRFLLE G+SLVLVDW+TSGRMSRGEGWAF RLESRNE+M QS  + + QD+  +G W+PLV DSL+LEE+PGL++R+RMLGMNVVG+VIL+G R+E  VS +L  E  +R RFP+GLE            G  TG         D +  L  ++ GR LSSVSPL G G +  CRGL  RFAAERT+D R MLH++LLPL+  LGGR+PYSREGG
Sbjct:    1 MRSTGELRFEFVQGKTACTTAYARYPIKFVSATRASDGGCSWVYTLGYGGGAVCGDEVTITCHVEENSTAALTTQGSTKVFKRGSKSEHATATELESDQCHRASQTLLSRVARAALLVVVPDPVTCFENSSFKQHQRFLLEHGSSLVLVDWLTSGRMSRGEGWAFNRLESRNEVMVQSCTKGKGQDEDNSGGWKPLVFDSLVLEELPGLTVRERMLGMNVVGIVILLGPRLEGLVSKVLDLETTKRSRFPAGLEP----------KGAATG---------DKQTALPPRETGRTLSSVSPLNG-GIDDWCRGLAYRFAAERTDDARAMLHDLLLPLQQALGGRAPYSREGG 331          
BLAST of mRNA_F-serratus_M_contig111.1049.1 vs. uniprot
Match: A0A835Z1C4_9STRA (Urease accessory protein UreD n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1C4_9STRA)

HSP 1 Score: 174 bits (441), Expect = 3.480e-47
Identity = 121/311 (38.91%), Postives = 165/311 (53.05%), Query Frame = 2
Query:  179 YFLGYGGGAVCGDNVTVRCHVNQDCTAALTTQGSTKVYK--RTARTRDSRVLGGEGDCERAS------QSLLARVCSGALLAMVPDPVTCFEDASFRQHQRFLLERGASLVLVDWITSGRMSRGEGWAFERLESRNEIMTQSLAEAERQDQAGAWEPLVLDSLILEEIPGLSIRDRMLGMNVVGVVILVGLRVEKAVSALLQREARRRKRFPSGLEDPTKDAKPQRRSGDKTGQTKGEVEQEDVKKILTGKDKGRVLSSVSPLEGSGGEARCRGLVCRFAAERTEDCRTMLHEILLPLKHELGGRSPYSRE 1087
            Y +GYGGG +  D V+V C ++   T A+TTQ +TKVYK  + A    S    G G   +A       Q++   + +GALLA+VPDPVTCF+ A++RQ Q F +  G SLVL DW+TSGRM RGE W FER ES N I                   +VLD L+L++    +++ RM GM+ VG+ + +G +V   V+ LL RE  RR+RF +            R++G                 +  G   G+++SSVSPL G        G V RFAAE+TED   +L E L PL+  LG  SPYS +
Sbjct:   16 YVIGYGGGLLAKDRVSVECVLDTGATVAITTQSTTKVYKQQKVAPIAVSASGSGNGASSKAEEPPWCGQTMYCTISTGALLALVPDPVTCFKAANYRQVQEFRVAAGGSLVLCDWLTSGRMERGEVWDFERFESHNAIYVDDSL-------------VVLDPLVLQDGIQGTVKQRMRGMHAVGMAVFIGPQVADMVAQLLAREHARRQRFSAV-----------RQAGSAAAA------------MGVGCTGGKIMSSVSPLPG-------HGAVLRFAAEQTEDAYALLQEALEPLEDILGA-SPYSND 282          
BLAST of mRNA_F-serratus_M_contig111.1049.1 vs. uniprot
Match: A0A8J5SYZ9_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5SYZ9_ZIZPA)

HSP 1 Score: 164 bits (415), Expect = 3.660e-43
Identity = 121/343 (35.28%), Postives = 170/343 (49.56%), Query Frame = 2
Query:   59 TGELSFEHVQGKTSITTAYSRYPLKFVSATRACQGGC--AWVYFLGYGGGAVCGDNVTVRCHVNQDCTAALTTQGSTKVYKRTARTRDSRVLGGEGDCERASQSLLARVCSGALLAMVPDPVTCFEDASFRQHQRFLLERGASLVLVDWITSGRMSRGEGWAFERLESRNEIMTQSLAEAERQDQAGAWEPLVLDSLILEEIPGLSIRDRMLGMNVVGVVILVGLRVEKAVSALLQREARRRKRFPSGLEDPTKDAKPQRRSGDKTGQTKGEVEQEDVKKILTGKDKGRVLSSVSPLEGSGGEARCRGLVCRFAAERTEDCRTMLHEILLPLKHELGGRSPYS 1081
            TG L  E V+G++++T  +++YPLK ++ ++     C  AW+Y + YGGG V GD ++    V   CTAA+TTQ STKVYK               D + + Q L ARV   ALLA++PDPVTCF  A + Q Q F +   ++LV+VDW TSGR   GE W F   +S N I+ +              +PL +DS++LEE    SI DRM G NVV +V+L+G ++ K +   +Q E +  K     L  PT         G  T + +    Q              +++S SP    G      G+V R  A  TE   + L   L  L+  LG  SPYS
Sbjct:   13 TGVLRVEKVRGRSAVTRCFAKYPLKLIAPSKVAPASCGAAWIYAITYGGGIVSGDRISCAVTVGDACTAAMTTQSSTKVYKAV-------------DSKCSEQVLEARVGKDALLALIPDPVTCFSTARYHQKQVFHVFTDSNLVIVDWFTSGRYESGEKWKFSFYKSINHIILED-------------QPLFIDSVLLEESSNCSIADRMQGYNVVAMVVLLGPKL-KHIQDQMQDEVK--KMMSVQLRPPTS------AGGRYTSRPQPLCPQMPP-----------LIASCSPFGRMG-----TGMVARITAVSTESVYSFLRHHLAALESFLGA-SPYS 303          
BLAST of mRNA_F-serratus_M_contig111.1049.1 vs. uniprot
Match: A0A6G0X5G0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X5G0_9STRA)

HSP 1 Score: 160 bits (406), Expect = 6.410e-42
Identity = 130/350 (37.14%), Postives = 169/350 (48.29%), Query Frame = 2
Query:   32 MLSGQKVRPTGELSFEHVQ--GKTSITTAYSRYPLKFV--SATRACQGGCAWVYFLGYGGGAVCGDNVTVRCHVNQDCTAALTTQGSTKVYKR--TARTRDSRVLGGEGDCERASQSLLARVCSGALLAMVPDPVTCFEDASFRQHQRFLLERGASLVLVDWITSGRMSRGEGWAFERLESRNEIMTQSLAEAERQDQAGAWEPLVLDSLILEEIPGLSIRDRMLGMNVVGVVILVGLRVEKAVSALLQREARRRKRFPSGLEDPTKDAKPQRRSGDKTGQTKGEVEQEDVKKILTGKDKGRVLSSVSPLEGSGGEARCRGLVCRFAAERTEDCRTMLHEILLPLKHELG 1063
            M+     R TGEL FE V   GKT+ T  Y  YPLKF+  S         A    LGYGGG V GD   +   V  D TA L TQ +TKVYK   TA T               SQ +   + S A LA+VPDP+TCF+ A ++Q+QRF +   ASLV +DW+TSGR +RGE W+F   ES N+++ +        D A    P++LD + L+E    S+R RM GM V+G V+LVG RV+    AL+QR AR             K  KP   S    G     V                V S+VSPL  S       G + R A   TE+    + ++L PL+  +G
Sbjct:    1 MVDPSSPRCTGELVFEQVSSLGKTTATHEYVAYPLKFLHPSTIMPLSFPTAVTCILGYGGGLVGGDCTRMNVQVGPDATAVLCTQATTKVYKPKPTAPTH-------------TSQEMSVTLDSNAFLALVPDPITCFDGAMYKQYQRFTVHPTASLVFIDWMTSGRHARGESWSFASYESCNQVVMEG-------DDA----PILLDRMRLQEEAEHSLRARMGGMTVLGTVVLVGPRVKAMADALIQRGAR-------------KALKPNE-SPIPYGHVATNVHP-------------NVRSAVSPLGKS-------GAIVRIAGRTTEEAYAFVKDLLAPLEDLVG 292          
BLAST of mRNA_F-serratus_M_contig111.1049.1 vs. uniprot
Match: A0A6J1KQ92_CUCMA (urease accessory protein D n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1KQ92_CUCMA)

HSP 1 Score: 160 bits (405), Expect = 8.060e-42
Identity = 94/228 (41.23%), Postives = 132/228 (57.89%), Query Frame = 2
Query:   62 GELSFEHVQGKTSITTAYSRYPLKFVSATRA--CQGGCAWVYFLGYGGGAVCGDNVTVRCHVNQDCTAALTTQGSTKVYKRTARTRDSRVLGGEGDCERASQSLLARVCSGALLAMVPDPVTCFEDASFRQHQRFLLERGASLVLVDWITSGRMSRGEGWAFERLESRNEIMTQSLAEAERQDQAGAWEPLVLDSLILEEIPGLSIRDRMLGMNVVGVVILVGLRVEK 739
            G +  E V GK++++  +S+YP+KF+   +    +    W+Y L YGGG V GD+++    V   CTAALTTQ STKVYK              G+ ER+ Q L AR+ S ALLA++PDPVTCF  A + Q Q F ++ G+SLVLVDW TSGR  RGE W F   +S N+I  +               PL  D+++LE+    SI +RM G  V+ +V+++G RV+K
Sbjct:    5 GAVVIEKVAGKSAVSRCFSKYPIKFIIPRKVGPSKTDAIWIYTLNYGGGIVSGDSISCELTVKDGCTAALTTQSSTKVYK------------SRGE-ERSEQLLEARIGSDALLAVLPDPVTCFATARYAQKQVFRVDSGSSLVLVDWFTSGRHGRGEIWEFNLFKSTNQIFLED------------GHPLFFDTVLLEQGSTNSIIERMHGYQVIAMVVILGPRVKK 207          
BLAST of mRNA_F-serratus_M_contig111.1049.1 vs. uniprot
Match: A0A835RAA5_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835RAA5_VANPL)

HSP 1 Score: 159 bits (402), Expect = 2.240e-41
Identity = 94/245 (38.37%), Postives = 138/245 (56.33%), Query Frame = 2
Query:   44 QKVRPTGELSFEHVQGKTSITTAYSRYPLKFVSATRACQG--GCAWVYFLGYGGGAVCGDNVTVRCHVNQDCTAALTTQGSTKVYKRTARTRDSRVLGGEGDCERASQSLLARVCSGALLAMVPDPVTCFEDASFRQHQRFLLERGASLVLVDWITSGRMSRGEGWAFERLESRNEIMTQSLAEAERQDQAGAWEPLVLDSLILEEIPGLSIRDRMLGMNVVGVVILVGLRVEKAVSALLQREAR 772
            +K   TG ++ E ++GKT++T  +S+YPLK +   +AC       WV  L YGGG V GD + V  ++   CT ALTTQ STKVYK               D + + Q L A+V    LLA++PDPVTCF +A + Q Q F +   ++LV+VDWITSGR   GE W FE  +S N+I               A EPL++DS++LE+   +S+ +RM    VV ++I++G ++ K +   +Q E +
Sbjct:    3 EKREETGFVAVEKIEGKTTVTRCFSKYPLKLIVPRKACSSTSDAVWVCSLSYGGGIVSGDRILVALNIGDGCTMALTTQASTKVYKAV-------------DSKCSEQILEAKVQRNGLLAVIPDPVTCFSNAIYSQKQFFWVSSDSNLVIVDWITSGRHESGEIWDFELYKSSNKIFLD------------ANEPLLIDSVLLEQASTVSVAERMKDYQVVAMIIVMGPKL-KPIQDQIQMEVK 221          
BLAST of mRNA_F-serratus_M_contig111.1049.1 vs. uniprot
Match: UPI001CC44933 (urease accessory protein D isoform X1 n=3 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC44933)

HSP 1 Score: 158 bits (400), Expect = 4.030e-41
Identity = 100/231 (43.29%), Postives = 132/231 (57.14%), Query Frame = 2
Query:   59 TGELSFEHVQGKTSITTAYSRYPLKFVSATRACQGGCA-----WVYFLGYGGGAVCGDNVTVRCHVNQDCTAALTTQGSTKVYKRTARTRDSRVLGGEGDCERASQSLLARVCSGALLAMVPDPVTCFEDASFRQHQRFLLERGASLVLVDWITSGRMSRGEGWAFERLESRNEIMTQSLAEAERQDQAGAWEPLVLDSLILEEIPGLSIRDRMLGMNVVGVVILVGLRVE 736
            TG L  E V+GK+++T  +S+YPLKF+  ++A   GC+     WVY L YGGG V GD+++    +   CTAALTTQ STKVYK            G   CE   Q L  R+ S ALLA++PDPVTCF  A + Q Q F +   +SLV+VDWITSGR  RGE W F   +S N+I  +              EPL LDS++LE     SI +RM    VV ++I +G +V+
Sbjct:    3 TGILVVEKVRGKSTVTRCFSKYPLKFIVPSKA---GCSKTDAVWVYSLTYGGGIVSGDSISCTLTIGDGCTAALTTQASTKVYKSV----------GSKCCE---QFLEVRIGSDALLAVIPDPVTCFSTARYSQKQVFRVASDSSLVIVDWITSGRHERGEKWDFGLYKSTNQIFLEK------------DEPLFLDSVLLEAGSITSIAERMQDYQVVAMIIFLGPKVK 205          
BLAST of mRNA_F-serratus_M_contig111.1049.1 vs. uniprot
Match: A0A2P5D283_PARAD (Urease accessory protein UreD n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5D283_PARAD)

HSP 1 Score: 156 bits (395), Expect = 2.120e-40
Identity = 121/342 (35.38%), Postives = 168/342 (49.12%), Query Frame = 2
Query:   59 TGELSFEHVQGKTSITTAYSRYPLKFVSATRA--CQGGCAWVYFLGYGGGAVCGDNVTVRCHVNQDCTAALTTQGSTKVYKRTARTRDSRVLGGEGDCERASQSLLARVCSGALLAMVPDPVTCFEDASFRQHQRFLLERGASLVLVDWITSGRMSRGEGWAFERLESRNEIMTQSLAEAERQDQAGAWEPLVLDSLILEEIPGLSIRDRMLGMNVVGVVILVGLRVEKAVSALLQREARRRKRFPSGLEDPTKDAKPQRRSGDKTGQTKGEVEQEDVKKILTGKDKGRVLSSVSPLEGSGGEARCRGLVCRFAAERTEDCRTMLHEILLPLKHELGGRSPY 1078
            +G+++ E V GK+++T  YS+YPLKF+   +    +    W+Y L YGGG V GD+++    +   CTA LTTQ STKVYK          LG +     + Q L ARV S ALLA++PDPVTCF  A F Q Q F +  G++L++VDW+TSGR   GE W F+  +S N I  +              EPL LD+++LE+    SI +RML   V+ +V+  G ++ K +   +Q + R+          PT   K QR S                   +T K      SSV   EG       +G+V R  A  TE     L   L  L+  LG  SPY
Sbjct:    3 SGKVAVEKVGGKSTVTRCYSKYPLKFIVPNKVGNSKTDAVWIYSLTYGGGIVSGDSISCNFAIGDGCTAVLTTQASTKVYKS---------LGSKS----SEQVLEARVGSNALLAVIPDPVTCFSTARFTQKQVFRMACGSNLIMVDWVTSGRHESGEKWDFDLYKSTNHIFLED------------DEPLFLDTVLLEKGSLSSIAERMLDYQVIAMVVFWGPKL-KYIQNQVQEDVRKMMTEQLKFSSPTSTHKRQRTSDH----------------CIT-KPNFIASSSVFGPEG-------KGVVVRIVATTTESVYIFLRHQLASLEPLLGV-SPY 293          
BLAST of mRNA_F-serratus_M_contig111.1049.1 vs. uniprot
Match: UPI0005D32C76 (urease accessory protein D n=1 Tax=Amborella trichopoda TaxID=13333 RepID=UPI0005D32C76)

HSP 1 Score: 156 bits (395), Expect = 2.350e-40
Identity = 117/337 (34.72%), Postives = 174/337 (51.63%), Query Frame = 2
Query:   77 EHVQGKTSITTAYSRYPLKFVSATR--ACQGGCAWVYFLGYGGGAVCGDNVTVRCHVNQDCTAALTTQGSTKVYKRTARTRDSRVLGGEGDCERASQSLLARVCSGALLAMVPDPVTCFEDASFRQHQRFLLERGASLVLVDWITSGRMSRGEGWAFERLESRNEIMTQSLAEAERQDQAGAWEPLVLDSLILEEIPGLSIRDRMLGMNVVGVVILVGLRVEKAVSALLQREARRRKRFPSGLEDPTKDAKPQRRSGDKTGQTKGEVEQEDVKKILT-GKDKGRVLSSVSPLEGSGGEARCRGLVCRFAAERTEDCRTMLHEILLPLKHELGGRSPY 1078
            + V G++++T  +++YPLK +S T+  +C+    WVY + +GGG V GD+V+    V  DCTA LTTQ STKVY+               D + + QSL  RV   AL+A++P PVTCF  A ++Q Q F + R +SLV+VDW+TSGR   GE WAF    S N I++        +DQ    +PL+LDSL+LE+   +     M    V+ ++IL+G + E  V   +Q + +++     G+   +K      R  D+           D+K  LT G+ +  +++S S         +  GLV R AA  T      L E L  L+  LG  SPY
Sbjct:    9 DKVGGRSTLTRCFAKYPLKLISPTKVGSCKSDVVWVYMVSFGGGMVSGDHVSCAMSVGDDCTAVLTTQASTKVYRAV-------------DSKSSDQSLQVRVGCNALVAVLPHPVTCFATAKYKQKQVFSVSRSSSLVVVDWVTSGRYECGEKWAFNSYNSTNHIIS-------NEDQ----QPLLLDSLVLEQGSSMKGTYGMQDYQVIAMIILLGHKFEH-VQNEIQEKVKKKMSEEFGMRLTSK------RQHDR-----------DMKPDLTYGRSRPELIASCSTFG-----PKDAGLVIRVAATTTGLVYKFLKEHLASLEPLLGA-SPY 297          
BLAST of mRNA_F-serratus_M_contig111.1049.1 vs. uniprot
Match: A0A6P5GP70_ANACO (urease accessory protein D n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GP70_ANACO)

HSP 1 Score: 156 bits (395), Expect = 4.380e-40
Identity = 91/228 (39.91%), Postives = 128/228 (56.14%), Query Frame = 2
Query:   59 TGELSFEHVQGKTSITTAYSRYPLKFVSATR--ACQGGCAWVYFLGYGGGAVCGDNVTVRCHVNQDCTAALTTQGSTKVYKRTARTRDSRVLGGEGDCERASQSLLARVCSGALLAMVPDPVTCFEDASFRQHQRFLLERGASLVLVDWITSGRMSRGEGWAFERLESRNEIMTQSLAEAERQDQAGAWEPLVLDSLILEEIPGLSIRDRMLGMNVVGVVILVGLRVE 736
            TG    E V+G++++T  +S+YPLK +   +  +      W+Y L YGGG V GD V+ R  V   CTAA+TTQ STKVYK               D + + Q L AR+   ALLA++PDPVTCF  A + Q Q F L   ++LV+VDWITSGR   GE W FE   S N I  +              +PL LDS++LE+   +SI +RM   +V+ +V+++G R++
Sbjct:   28 TGMARVEKVRGRSTVTRCFSKYPLKLILPKKVGSVHVDAVWIYTLSYGGGIVSGDRVSCRISVGDGCTAAMTTQASTKVYKSV-------------DSKCSEQILAARIGKDALLAVIPDPVTCFSTARYSQKQVFRLFSDSNLVVVDWITSGRHESGEKWDFEHYRSTNHIFLEE------------EQPLFLDSVVLEQKSSVSIAERMQQYHVIAMVVILGPRLK 230          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig111.1049.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXW1_ECTSI4.140e-13861.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z1C4_9STRA3.480e-4738.91Urease accessory protein UreD n=1 Tax=Tribonema mi... [more]
A0A8J5SYZ9_ZIZPA3.660e-4335.28Uncharacterized protein n=1 Tax=Zizania palustris ... [more]
A0A6G0X5G0_9STRA6.410e-4237.14Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6J1KQ92_CUCMA8.060e-4241.23urease accessory protein D n=3 Tax=Cucurbita TaxID... [more]
A0A835RAA5_VANPL2.240e-4138.37Uncharacterized protein n=1 Tax=Vanilla planifolia... [more]
UPI001CC449334.030e-4143.29urease accessory protein D isoform X1 n=3 Tax=Telo... [more]
A0A2P5D283_PARAD2.120e-4035.38Urease accessory protein UreD n=2 Tax=Cannabaceae ... [more]
UPI0005D32C762.350e-4034.72urease accessory protein D n=1 Tax=Amborella trich... [more]
A0A6P5GP70_ANACO4.380e-4039.91urease accessory protein D n=3 Tax=Ananas comosus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig111contigF-serratus_M_contig111:746950..752159 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score412.1
Seed ortholog evalue2.6e-112
Seed eggNOG ortholog2880.D7FXW1
Preferred nameureD
KEGG koko:K03190
Hectar predicted targeting categoryother localisation
GOsGO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019627,GO:0034641,GO:0043085,GO:0043603,GO:0044093,GO:0044237,GO:0044281,GO:0050790,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071704,GO:0071941,GO:1901564,GO:1905181,GO:1905182
EggNOG free text desc.nickel cation binding
EggNOG OGs2QSQN@2759,COG0138@1
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons8
Model size1473
Cds size1074
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig111.1049.1prot_F-serratus_M_contig111.1049.1Fucus serratus malepolypeptideF-serratus_M_contig111 746978..751788 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928996.4392984-UTR-F-serratus_M_contig111:746949..7469771622928996.4392984-UTR-F-serratus_M_contig111:746949..746977Fucus serratus maleUTRF-serratus_M_contig111 746950..746977 +
1690962661.7456696-UTR-F-serratus_M_contig111:746949..7469771690962661.7456696-UTR-F-serratus_M_contig111:746949..746977Fucus serratus maleUTRF-serratus_M_contig111 746950..746977 +
1622928996.6013012-UTR-F-serratus_M_contig111:751788..7521591622928996.6013012-UTR-F-serratus_M_contig111:751788..752159Fucus serratus maleUTRF-serratus_M_contig111 751789..752159 +
1690962661.828968-UTR-F-serratus_M_contig111:751788..7521591690962661.828968-UTR-F-serratus_M_contig111:751788..752159Fucus serratus maleUTRF-serratus_M_contig111 751789..752159 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928996.465631-CDS-F-serratus_M_contig111:746977..7470691622928996.465631-CDS-F-serratus_M_contig111:746977..747069Fucus serratus maleCDSF-serratus_M_contig111 746978..747069 +
1690962661.7560308-CDS-F-serratus_M_contig111:746977..7470691690962661.7560308-CDS-F-serratus_M_contig111:746977..747069Fucus serratus maleCDSF-serratus_M_contig111 746978..747069 +
1622928996.478626-CDS-F-serratus_M_contig111:747239..7472971622928996.478626-CDS-F-serratus_M_contig111:747239..747297Fucus serratus maleCDSF-serratus_M_contig111 747240..747297 +
1690962661.7636962-CDS-F-serratus_M_contig111:747239..7472971690962661.7636962-CDS-F-serratus_M_contig111:747239..747297Fucus serratus maleCDSF-serratus_M_contig111 747240..747297 +
1622928996.4938552-CDS-F-serratus_M_contig111:747959..7480671622928996.4938552-CDS-F-serratus_M_contig111:747959..748067Fucus serratus maleCDSF-serratus_M_contig111 747960..748067 +
1690962661.7713215-CDS-F-serratus_M_contig111:747959..7480671690962661.7713215-CDS-F-serratus_M_contig111:747959..748067Fucus serratus maleCDSF-serratus_M_contig111 747960..748067 +
1622928996.5082772-CDS-F-serratus_M_contig111:748508..7486701622928996.5082772-CDS-F-serratus_M_contig111:748508..748670Fucus serratus maleCDSF-serratus_M_contig111 748509..748670 +
1690962661.7815993-CDS-F-serratus_M_contig111:748508..7486701690962661.7815993-CDS-F-serratus_M_contig111:748508..748670Fucus serratus maleCDSF-serratus_M_contig111 748509..748670 +
1622928996.5240757-CDS-F-serratus_M_contig111:749947..7500761622928996.5240757-CDS-F-serratus_M_contig111:749947..750076Fucus serratus maleCDSF-serratus_M_contig111 749948..750076 +
1690962661.7924268-CDS-F-serratus_M_contig111:749947..7500761690962661.7924268-CDS-F-serratus_M_contig111:749947..750076Fucus serratus maleCDSF-serratus_M_contig111 749948..750076 +
1622928996.5372112-CDS-F-serratus_M_contig111:750348..7504681622928996.5372112-CDS-F-serratus_M_contig111:750348..750468Fucus serratus maleCDSF-serratus_M_contig111 750349..750468 +
1690962661.8009722-CDS-F-serratus_M_contig111:750348..7504681690962661.8009722-CDS-F-serratus_M_contig111:750348..750468Fucus serratus maleCDSF-serratus_M_contig111 750349..750468 +
1622928996.5699847-CDS-F-serratus_M_contig111:751006..7512011622928996.5699847-CDS-F-serratus_M_contig111:751006..751201Fucus serratus maleCDSF-serratus_M_contig111 751007..751201 +
1690962661.8092954-CDS-F-serratus_M_contig111:751006..7512011690962661.8092954-CDS-F-serratus_M_contig111:751006..751201Fucus serratus maleCDSF-serratus_M_contig111 751007..751201 +
1622928996.5871987-CDS-F-serratus_M_contig111:751578..7517881622928996.5871987-CDS-F-serratus_M_contig111:751578..751788Fucus serratus maleCDSF-serratus_M_contig111 751579..751788 +
1690962661.818691-CDS-F-serratus_M_contig111:751578..7517881690962661.818691-CDS-F-serratus_M_contig111:751578..751788Fucus serratus maleCDSF-serratus_M_contig111 751579..751788 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig111.1049.1

>prot_F-serratus_M_contig111.1049.1 ID=prot_F-serratus_M_contig111.1049.1|Name=mRNA_F-serratus_M_contig111.1049.1|organism=Fucus serratus male|type=polypeptide|length=358bp
MMLSGQKVRPTGELSFEHVQGKTSITTAYSRYPLKFVSATRACQGGCAWV
YFLGYGGGAVCGDNVTVRCHVNQDCTAALTTQGSTKVYKRTARTRDSRVL
GGEGDCERASQSLLARVCSGALLAMVPDPVTCFEDASFRQHQRFLLERGA
SLVLVDWITSGRMSRGEGWAFERLESRNEIMTQSLAEAERQDQAGAWEPL
VLDSLILEEIPGLSIRDRMLGMNVVGVVILVGLRVEKAVSALLQREARRR
KRFPSGLEDPTKDAKPQRRSGDKTGQTKGEVEQEDVKKILTGKDKGRVLS
SVSPLEGSGGEARCRGLVCRFAAERTEDCRTMLHEILLPLKHELGGRSPY
SREGGTC*
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mRNA from alignment at F-serratus_M_contig111:746950..752159+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig111.1049.1 ID=mRNA_F-serratus_M_contig111.1049.1|Name=mRNA_F-serratus_M_contig111.1049.1|organism=Fucus serratus male|type=mRNA|length=5210bp|location=Sequence derived from alignment at F-serratus_M_contig111:746950..752159+ (Fucus serratus male)
TTTTCTTTAAATGACATAGTCCAAAGTGATGATGTTATCTGGCCAAAAGG TGCGCCCAACGGGCGAACTAAGCTTCGAACACGTGCAGGGAAAGACTTCC ATCACTACCGCCTACTCAAGGTGAGTCGGTGTTCTCGAAGAGTGCCTTTG AACCAAGCACGTGGCGTCTACGAGCATACCAGTATGTCGGAACCAATTTC ACTGCTACAGCGTCTAGTTCACTGGTACAAGGAAGTAGATCACTATGCTC ACCAAGGATTATGTCTTCCCGCGCCTTCCACACTCTTCAGGTATCCCCTC AAGTTTGTGTCTGCAACCAGGGCTTGTCAGGGAGGTTGTGCGTGGGTGGT GAGTACGTCATTTATCTCTGTTGTTTTGGTACCATATACAGCGTCATTCT ATGTCGATAAATATATCTGTAACATTGGTACAACAAGGAGGCGTCTCTTC GAGAGGCATAATTGAGATGTGACTTGAGAGGCATGATCTTTATGTACAGT ACCAACATCATCCAGCCCACTCTGATCAATACCCTTATAGCCTACCCGGT ATGTTCCCACCTACACGTTTGGACAGGTTCCCCCCTGATTGGATGGATGC TCAGAAAGTTTAGTTGCTTGAGTCCAGATTTTTCTTGAAATTATTACTGT GCACACAGTCTAAACACCCCCACGTACGAGCACCATTAATTATACTGGTA TAAGTTTGTGCTCCGTTGAGTGCATCCGACTGCGGCAAGTATTACAACTC TACAGGACACCTTTACTTTACAGCTAGTGGAGCTGCTGCAGGTACAAGTT CCAGTTCTACAGAGGAGGGCAGAGTCGGTACAGCAGTACAAACAAAGAAC GAACGGTTCAGGTAACCGCCTGCCGTACAGGTACAACTGACTAATAATAC ATGTACAGCAGTAAAATATTTTCATAGAGCCTATTAAAAGCTGTGTAAGC ACTTTGCCGCCCCGACAGACAGTCTTGAACCATGACCAACAAGTGCTCCC AACTCTCCAGTATTTTTTAGGCTACGGAGGAGGTGCTGTCTGCGGGGACA ACGTGACCGTGCGATGCCATGTGAACCAAGACTGCACTGCAGCGCTTACA ACTCAGGGGTCAACCAAGGTGGGCACTAACGAGTTACTTCATAGTGCCGT TTACATTTCATTTCGTGATGCTGCGGCAGGTGGCACTCACCATTTGAGTC AACTATTACTTCGTAGTAGTACACAATATCGACGGGCTGCGCCCCCCTTC CAGTCGCTCAAGTTGAAAGTACAAACATAGCAAAATACGGAGTCATGTCA CGCAGCAGGCGTCTGTTATCCTCGAAAACTTAGCCTCCCCCCCTCTGGTC TCTTCGTGAGCATTCCCACCGACTTCTGTCCCGGACGAGCCTATCCCCAG CTCCTGGTCACAAGGCTTGACGTCACGACCTGAGCGGCTCATGCGACTTT TTCTTCTTCTTTTCCTTTTCACCGAACCCCGTCCCACGCGAAAGGGTGTC GATACCGGATGAGCGGCTCATGCGTATCTATCCCATCTTGCGCACATCGT ACGGCGCAGGTGTACAAACGTACGGCTAGGACCAGAGACTCGAGAGTTTT GGGGGGCGAAGGGGATTGCGAGCGGGCATCGCAGTCGCTTCTCGCCCGAG TTTGCTCGGGGGCTCTGTTGGCGATGGTCCCTGACCCTGTCACGTGCTTC GAAGACGCCAGTTTCCGACAGGTGGGAGGTTACGTACGGAAACTAGACGG GAACGAATGGATCGCATCTCTGCCGGGTGGCGCTGCGCGTAAAATGTGCA GTCACCCTGTCGAGGGTCACTCTGGCAGGCGTTGCATGAGATTTTTACTC GACATGCCCCGCCGCTTCATAGGATTTATTGCTTCGCGCTTTGTGCCGGA GGCGTCTGTTATGGAAGGCCTTCGCGAAAACCTCACCATTACGCTCCCTA CCCCCCTCCCCCCAGCCCCCTCCCAGCCCCCATCCCGGCCCAAGCTCCTC TTATCGTCTCATCGTGCCAATCTCGTCTTCGAGAAAAATACCATACCTGC ACAAACCCCGACTCCGTTATCCTCGAAAACTTAGCCCCCCCCTCCTGGTC TCTTCGTGGGCATTCCCACCGACTTCTGTCCCGGACGAGCCTATCCCCAG CTCCTGGTCTCAAGGCTTGACGTCACGACCTGAGCGGCTCATGCGACTTT TTCTTCTTCTTCTTTTCCTTTTCATCGAACCCCGTCCCACGCGAAAGGGT GACGATACCGGATGAGCGGCTCATGCGTATCTATCCCATCTTGCGCACAT CGTACGGCGCAGGTGTACAAACGTACGGCTAGGATCAGAGACTCGAGAGT TTTGGGGGGCGAAGGGGATTGCGAGCGGGCGTCGCAGTCGCTTCTCGCCC GAGTTTGCTCGGGGGCTCTGCTGGCGATGGTCCCTGACCCTGTCACGTGC TTCGAAGACGCCAGTTTCCGACAGGTGGGGGGTTACGTACGGAAACTAGA CGGGAACGAATGGATCGCATCTCTGTCGGGTGGCGCTGCGCGTAAAGTGT GCAGCCACCCTGTCGAGGGTCACTCCGGCAGGCGTTGCATGATATTTTTG CTCGACATGCCCCGCCGCTTCACAGGACTTATTGCTTCGCGCGTTGTGCC GGAGGCGTCTGTTATGGAACGCCTTCGCGAAAACCTCACCATTACGCTCC CTACCCCCTCCCCCAGCCCCCTCCCAGCCCCCATCCCGGCCCAAGCTCCT CTTATCGTTTCATCGTGCCAATCTCGTCTTCGAGAAAAATACCATACCTG CACAAACCCCGACTCCGGAATCCACGCGTCCACTTAACTATCTCGCTTTT ACATCCTATGACACAAGTAATGTTCAAGCAGACCCCATCGATTACTTGTA AATTTTTTGCATGGTCATATTTTTTCAAAATGATGCCATATGTGGATACC GTAGTTCGAAGCACGAGATTTGTTTTTTTCTCGTCCTCCATTCGACAGCA CCAACGGTTTCTACTCGAGCGCGGCGCCAGCCTCGTCCTCGTCGACTGGA TTACCAGCGGCCGTATGTCTCGCGGGGAAGGCTGGGCTTTCGAGCGCCTG GAGTCGCGCAACGAGATCATGACCCAGGTGGGATGCTCGAGCCAAAGTAT ACGCACAATACAGTACTTGTAACGACAAAGTATGCCCGCCAGCCCCTATA TCGTACGGACAATGTATAGAGTGCATGGGTTCATGGCACTCGCTTGCCCT TGAGGTGTTTCTCGTCACTTTTTTCCGAGGCACAAGCGATCGCGATCCTT CCGCCTCTCGCGGCCGTCGACTGTTCTGACCACGGATGATGTCCGTTATG CCGCCGTGTCGTTGCGCCACGTCAACACGGCGGATGGCGTCACCCCAAGA GCCTGGCCGAGGCAGAGCGGCAGGACCAAGCGGGCGCGTGGGAACCCCTG GTCCTGGATTCCTTGATCCTGGAGGAGATTCCGGGCCTCTCGATCCGCGA CAGAATGCTAGGGATGAACGTGAGGGATCTTGTGTGAGGCAAGCGATTCC GTACGGCACCGTGACGGGTTTTTTTTAGTTTATGCTATTTAGTGCAGGAC AAAACTAGCTAGCTACCCCGCTACCTCCGGGAGAGCGCCCACAGCTGTAT CTGGCGTAGACCTTCGTGCACGCCACAGGTGGTATTCCCCTTCGTTGGCA CAAAGAGAGATACAACACACAAGTCATACCGCCGGCGGATGGGCTACGGC GGATAGACTGAGGCCGAAGAGGATCCCCATGCCTGCGGCCCGTCCCGCAT CCTCCACTCACGTGGCGCCGTTACGTAATATATCCCAGGCTCTTTGTTTT ACTTTGTTTCTATTTACAATGGTAATAGCTATTTTCCTCCATACAGCTGA AACGAGGGAGGCATTTTTTTCCCCCCCACCCTCTCCTTTACTCTCTATAT ACTTCCAGCGCAGCAACATACAAGACACTCAATGGATCGAAACCTCTACT TAACTGGAGTATAAAGATATGTCGGCCTGTCTCCACTTGGTGTGTGTGTG AACACAGGTGGTTGGGGTTGTAATCCTCGTGGGCCTTCGGGTGGAAAAGG CTGTATCGGCGCTGTTGCAGCGCGAGGCCCGGAGGCGAAAACGGTTTCCC TCGGGGCTGGAAGATCCCACCAAGGACGCGAAGCCTCAGCGGAGGAGCGG AGATAAAACGGGGCAGACCAAAGGAGAAGTGGAACAGGAAGACGTGAAGA AGGTAACGCGAGCGCGCCGTGGAGCCCAGTTTCCTTGCCTGCCGCTTATT TTTGGTTTCCCCGGCCACAGGAGGGAAGCAGTCGCAGAGTTCACCGAAGT TTCTCGATCACAATGAGGCAACGTCGAGTTTGCGTGTCATATATGACACG ATGCTTTGGTCTCCCGCCGGACCATGCGTTGTCTATTGTCCAGAGTCGCC ATCAAAGCGCGTTGTTTTGTTGATATTTCAGTACAGCGGCTTGTTATTTT GCCGACACCACCACTTGTTTTCTTATTTTTTTTTTGCCGATTTATGTTCC CCCCCCCCCCTCCGCCCTTTCTTTCTTGCGTACGTTTGGTTTTGTTTTTA TGTTTTGCTTTTTCTCTTGAAAATAATAGATCCTCACCGGTAAAGACAAG GGAAGGGTGCTGTCCTCCGTGAGCCCGCTGGAGGGCAGCGGCGGCGAAGC CCGGTGTCGGGGGCTCGTGTGCCGTTTTGCTGCCGAAAGGACGGAGGACT GCCGCACGATGCTTCACGAGATCCTCCTCCCGCTCAAGCACGAGCTGGGA GGCCGATCGCCGTACAGCCGGGAGGGTGGGACGTGTTGAAAGGGTTGGAG TCTCTTTTTCCTCCAACCATGTATGTGGTATCAGACCGTGAAGACTCAAG TGACACATCGTCGTGAGCACGAGCGCTTTCTCGCAATTTTTTAGTGGCAA GTTTCTCGTCGTATTTCCGGGTAGATCCATCTGTATCCCCCCCTCCCTCC CCACGTTTTTTGTTTTTGTTTTTGTTTTTAGCGTTCCCATCGATAAAGCT GGCGCAAATATTTCCGAGGTTGTTGCGGACGTTTCTCCCCAAAGCAATAT CGCTCTATCCATCTCCATCACATGAAATTTAGAAACTGGAAAGCTACGCC TACTAGGGTCAATTTGGAGTACCCATCGGGGTGAGACCTCGTCGCAGTAG CGGAGGGCAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig111:746950..752159+

>mRNA_F-serratus_M_contig111.1049.1 ID=mRNA_F-serratus_M_contig111.1049.1|Name=mRNA_F-serratus_M_contig111.1049.1|organism=Fucus serratus male|type=CDS|length=2148bp|location=Sequence derived from alignment at F-serratus_M_contig111:746950..752159+ (Fucus serratus male)
ATGATGTTATCTGGCCAAAAGGTGCGCCCAACGGGCGAACTAAGCTTCGA
ACACGTGCAGGGAAAGACTTCCATCACTACCGCCTACTCAAGATGATGTT
ATCTGGCCAAAAGGTGCGCCCAACGGGCGAACTAAGCTTCGAACACGTGC
AGGGAAAGACTTCCATCACTACCGCCTACTCAAGGTATCCCCTCAAGTTT
GTGTCTGCAACCAGGGCTTGTCAGGGAGGTTGTGCGTGGGTGGTATCCCC
TCAAGTTTGTGTCTGCAACCAGGGCTTGTCAGGGAGGTTGTGCGTGGGTG
TATTTTTTAGGCTACGGAGGAGGTGCTGTCTGCGGGGACAACGTGACCGT
GCGATGCCATGTGAACCAAGACTGCACTGCAGCGCTTACAACTCAGGGGT
CAACCAAGTATTTTTTAGGCTACGGAGGAGGTGCTGTCTGCGGGGACAAC
GTGACCGTGCGATGCCATGTGAACCAAGACTGCACTGCAGCGCTTACAAC
TCAGGGGTCAACCAAGGTGTACAAACGTACGGCTAGGACCAGAGACTCGA
GAGTTTTGGGGGGCGAAGGGGATTGCGAGCGGGCATCGCAGTCGCTTCTC
GCCCGAGTTTGCTCGGGGGCTCTGTTGGCGATGGTCCCTGACCCTGTCAC
GTGCTTCGAAGACGCCAGTTTCCGACAGGTGTACAAACGTACGGCTAGGA
CCAGAGACTCGAGAGTTTTGGGGGGCGAAGGGGATTGCGAGCGGGCATCG
CAGTCGCTTCTCGCCCGAGTTTGCTCGGGGGCTCTGTTGGCGATGGTCCC
TGACCCTGTCACGTGCTTCGAAGACGCCAGTTTCCGACAGCACCAACGGT
TTCTACTCGAGCGCGGCGCCAGCCTCGTCCTCGTCGACTGGATTACCAGC
GGCCGTATGTCTCGCGGGGAAGGCTGGGCTTTCGAGCGCCTGGAGTCGCG
CAACGAGATCATGACCCAGCACCAACGGTTTCTACTCGAGCGCGGCGCCA
GCCTCGTCCTCGTCGACTGGATTACCAGCGGCCGTATGTCTCGCGGGGAA
GGCTGGGCTTTCGAGCGCCTGGAGTCGCGCAACGAGATCATGACCCAGAG
CCTGGCCGAGGCAGAGCGGCAGGACCAAGCGGGCGCGTGGGAACCCCTGG
TCCTGGATTCCTTGATCCTGGAGGAGATTCCGGGCCTCTCGATCCGCGAC
AGAATGCTAGGGATGAACAGCCTGGCCGAGGCAGAGCGGCAGGACCAAGC
GGGCGCGTGGGAACCCCTGGTCCTGGATTCCTTGATCCTGGAGGAGATTC
CGGGCCTCTCGATCCGCGACAGAATGCTAGGGATGAACGTGGTTGGGGTT
GTAATCCTCGTGGGCCTTCGGGTGGAAAAGGCTGTATCGGCGCTGTTGCA
GCGCGAGGCCCGGAGGCGAAAACGGTTTCCCTCGGGGCTGGAAGATCCCA
CCAAGGACGCGAAGCCTCAGCGGAGGAGCGGAGATAAAACGGGGCAGACC
AAAGGAGAAGTGGAACAGGAAGACGTGAAGAAGGTGGTTGGGGTTGTAAT
CCTCGTGGGCCTTCGGGTGGAAAAGGCTGTATCGGCGCTGTTGCAGCGCG
AGGCCCGGAGGCGAAAACGGTTTCCCTCGGGGCTGGAAGATCCCACCAAG
GACGCGAAGCCTCAGCGGAGGAGCGGAGATAAAACGGGGCAGACCAAAGG
AGAAGTGGAACAGGAAGACGTGAAGAAGATCCTCACCGGTAAAGACAAGG
GAAGGGTGCTGTCCTCCGTGAGCCCGCTGGAGGGCAGCGGCGGCGAAGCC
CGGTGTCGGGGGCTCGTGTGCCGTTTTGCTGCCGAAAGGACGGAGGACTG
CCGCACGATGCTTCACGAGATCCTCCTCCCGCTCAAGCACGAGCTGGGAG
GCCGATCGCCGTACAGCCGGGAGGGTGGGACGTGTTGAATCCTCACCGGT
AAAGACAAGGGAAGGGTGCTGTCCTCCGTGAGCCCGCTGGAGGGCAGCGG
CGGCGAAGCCCGGTGTCGGGGGCTCGTGTGCCGTTTTGCTGCCGAAAGGA
CGGAGGACTGCCGCACGATGCTTCACGAGATCCTCCTCCCGCTCAAGCAC
GAGCTGGGAGGCCGATCGCCGTACAGCCGGGAGGGTGGGACGTGTTGA
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