mRNA_F-serratus_M_contig111.1049.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig111.1049.1 vs. uniprot
Match: D7FXW1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW1_ECTSI) HSP 1 Score: 410 bits (1053), Expect = 4.140e-138 Identity = 217/351 (61.82%), Postives = 264/351 (75.21%), Query Frame = 2
Query: 50 VRPTGELSFEHVQGKTSITTAYSRYPLKFVSATRACQGGCAWVYFLGYGGGAVCGDNVTVRCHVNQDCTAALTTQGSTKVYKRTARTRDSRVLGGEGD-CERASQSLLARVCSGALLAMVPDPVTCFEDASFRQHQRFLLERGASLVLVDWITSGRMSRGEGWAFERLESRNEIMTQSLAEAERQDQ--AGAWEPLVLDSLILEEIPGLSIRDRMLGMNVVGVVILVGLRVEKAVSALLQREARRRKRFPSGLEDPTKDAKPQRRSGDKTGQTKGEVEQEDVKKILTGKDKGRVLSSVSPLEGSGGEARCRGLVCRFAAERTEDCRTMLHEILLPLKHELGGRSPYSREGG 1093
+R TGEL FE VQGKT+ TTAY+RYP+KFVSATRA GGC+WVY LGYGGGAVCGD VT+ CHV ++ TAALTTQGSTKV+KR +++ + E D C RASQ+LL+RV ALL +VPDPVTCFE++SF+QHQRFLLE G+SLVLVDW+TSGRMSRGEGWAF RLESRNE+M QS + + QD+ +G W+PLV DSL+LEE+PGL++R+RMLGMNVVG+VIL+G R+E VS +L E +R RFP+GLE G TG D + L ++ GR LSSVSPL G G + CRGL RFAAERT+D R MLH++LLPL+ LGGR+PYSREGG
Sbjct: 1 MRSTGELRFEFVQGKTACTTAYARYPIKFVSATRASDGGCSWVYTLGYGGGAVCGDEVTITCHVEENSTAALTTQGSTKVFKRGSKSEHATATELESDQCHRASQTLLSRVARAALLVVVPDPVTCFENSSFKQHQRFLLEHGSSLVLVDWLTSGRMSRGEGWAFNRLESRNEVMVQSCTKGKGQDEDNSGGWKPLVFDSLVLEELPGLTVRERMLGMNVVGIVILLGPRLEGLVSKVLDLETTKRSRFPAGLEP----------KGAATG---------DKQTALPPRETGRTLSSVSPLNG-GIDDWCRGLAYRFAAERTDDARAMLHDLLLPLQQALGGRAPYSREGG 331
BLAST of mRNA_F-serratus_M_contig111.1049.1 vs. uniprot
Match: A0A835Z1C4_9STRA (Urease accessory protein UreD n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1C4_9STRA) HSP 1 Score: 174 bits (441), Expect = 3.480e-47 Identity = 121/311 (38.91%), Postives = 165/311 (53.05%), Query Frame = 2
Query: 179 YFLGYGGGAVCGDNVTVRCHVNQDCTAALTTQGSTKVYK--RTARTRDSRVLGGEGDCERAS------QSLLARVCSGALLAMVPDPVTCFEDASFRQHQRFLLERGASLVLVDWITSGRMSRGEGWAFERLESRNEIMTQSLAEAERQDQAGAWEPLVLDSLILEEIPGLSIRDRMLGMNVVGVVILVGLRVEKAVSALLQREARRRKRFPSGLEDPTKDAKPQRRSGDKTGQTKGEVEQEDVKKILTGKDKGRVLSSVSPLEGSGGEARCRGLVCRFAAERTEDCRTMLHEILLPLKHELGGRSPYSRE 1087
Y +GYGGG + D V+V C ++ T A+TTQ +TKVYK + A S G G +A Q++ + +GALLA+VPDPVTCF+ A++RQ Q F + G SLVL DW+TSGRM RGE W FER ES N I +VLD L+L++ +++ RM GM+ VG+ + +G +V V+ LL RE RR+RF + R++G + G G+++SSVSPL G G V RFAAE+TED +L E L PL+ LG SPYS +
Sbjct: 16 YVIGYGGGLLAKDRVSVECVLDTGATVAITTQSTTKVYKQQKVAPIAVSASGSGNGASSKAEEPPWCGQTMYCTISTGALLALVPDPVTCFKAANYRQVQEFRVAAGGSLVLCDWLTSGRMERGEVWDFERFESHNAIYVDDSL-------------VVLDPLVLQDGIQGTVKQRMRGMHAVGMAVFIGPQVADMVAQLLAREHARRQRFSAV-----------RQAGSAAAA------------MGVGCTGGKIMSSVSPLPG-------HGAVLRFAAEQTEDAYALLQEALEPLEDILGA-SPYSND 282
BLAST of mRNA_F-serratus_M_contig111.1049.1 vs. uniprot
Match: A0A8J5SYZ9_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5SYZ9_ZIZPA) HSP 1 Score: 164 bits (415), Expect = 3.660e-43 Identity = 121/343 (35.28%), Postives = 170/343 (49.56%), Query Frame = 2
Query: 59 TGELSFEHVQGKTSITTAYSRYPLKFVSATRACQGGC--AWVYFLGYGGGAVCGDNVTVRCHVNQDCTAALTTQGSTKVYKRTARTRDSRVLGGEGDCERASQSLLARVCSGALLAMVPDPVTCFEDASFRQHQRFLLERGASLVLVDWITSGRMSRGEGWAFERLESRNEIMTQSLAEAERQDQAGAWEPLVLDSLILEEIPGLSIRDRMLGMNVVGVVILVGLRVEKAVSALLQREARRRKRFPSGLEDPTKDAKPQRRSGDKTGQTKGEVEQEDVKKILTGKDKGRVLSSVSPLEGSGGEARCRGLVCRFAAERTEDCRTMLHEILLPLKHELGGRSPYS 1081
TG L E V+G++++T +++YPLK ++ ++ C AW+Y + YGGG V GD ++ V CTAA+TTQ STKVYK D + + Q L ARV ALLA++PDPVTCF A + Q Q F + ++LV+VDW TSGR GE W F +S N I+ + +PL +DS++LEE SI DRM G NVV +V+L+G ++ K + +Q E + K L PT G T + + Q +++S SP G G+V R A TE + L L L+ LG SPYS
Sbjct: 13 TGVLRVEKVRGRSAVTRCFAKYPLKLIAPSKVAPASCGAAWIYAITYGGGIVSGDRISCAVTVGDACTAAMTTQSSTKVYKAV-------------DSKCSEQVLEARVGKDALLALIPDPVTCFSTARYHQKQVFHVFTDSNLVIVDWFTSGRYESGEKWKFSFYKSINHIILED-------------QPLFIDSVLLEESSNCSIADRMQGYNVVAMVVLLGPKL-KHIQDQMQDEVK--KMMSVQLRPPTS------AGGRYTSRPQPLCPQMPP-----------LIASCSPFGRMG-----TGMVARITAVSTESVYSFLRHHLAALESFLGA-SPYS 303
BLAST of mRNA_F-serratus_M_contig111.1049.1 vs. uniprot
Match: A0A6G0X5G0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X5G0_9STRA) HSP 1 Score: 160 bits (406), Expect = 6.410e-42 Identity = 130/350 (37.14%), Postives = 169/350 (48.29%), Query Frame = 2
Query: 32 MLSGQKVRPTGELSFEHVQ--GKTSITTAYSRYPLKFV--SATRACQGGCAWVYFLGYGGGAVCGDNVTVRCHVNQDCTAALTTQGSTKVYKR--TARTRDSRVLGGEGDCERASQSLLARVCSGALLAMVPDPVTCFEDASFRQHQRFLLERGASLVLVDWITSGRMSRGEGWAFERLESRNEIMTQSLAEAERQDQAGAWEPLVLDSLILEEIPGLSIRDRMLGMNVVGVVILVGLRVEKAVSALLQREARRRKRFPSGLEDPTKDAKPQRRSGDKTGQTKGEVEQEDVKKILTGKDKGRVLSSVSPLEGSGGEARCRGLVCRFAAERTEDCRTMLHEILLPLKHELG 1063
M+ R TGEL FE V GKT+ T Y YPLKF+ S A LGYGGG V GD + V D TA L TQ +TKVYK TA T SQ + + S A LA+VPDP+TCF+ A ++Q+QRF + ASLV +DW+TSGR +RGE W+F ES N+++ + D A P++LD + L+E S+R RM GM V+G V+LVG RV+ AL+QR AR K KP S G V V S+VSPL S G + R A TE+ + ++L PL+ +G
Sbjct: 1 MVDPSSPRCTGELVFEQVSSLGKTTATHEYVAYPLKFLHPSTIMPLSFPTAVTCILGYGGGLVGGDCTRMNVQVGPDATAVLCTQATTKVYKPKPTAPTH-------------TSQEMSVTLDSNAFLALVPDPITCFDGAMYKQYQRFTVHPTASLVFIDWMTSGRHARGESWSFASYESCNQVVMEG-------DDA----PILLDRMRLQEEAEHSLRARMGGMTVLGTVVLVGPRVKAMADALIQRGAR-------------KALKPNE-SPIPYGHVATNVHP-------------NVRSAVSPLGKS-------GAIVRIAGRTTEEAYAFVKDLLAPLEDLVG 292
BLAST of mRNA_F-serratus_M_contig111.1049.1 vs. uniprot
Match: A0A6J1KQ92_CUCMA (urease accessory protein D n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1KQ92_CUCMA) HSP 1 Score: 160 bits (405), Expect = 8.060e-42 Identity = 94/228 (41.23%), Postives = 132/228 (57.89%), Query Frame = 2
Query: 62 GELSFEHVQGKTSITTAYSRYPLKFVSATRA--CQGGCAWVYFLGYGGGAVCGDNVTVRCHVNQDCTAALTTQGSTKVYKRTARTRDSRVLGGEGDCERASQSLLARVCSGALLAMVPDPVTCFEDASFRQHQRFLLERGASLVLVDWITSGRMSRGEGWAFERLESRNEIMTQSLAEAERQDQAGAWEPLVLDSLILEEIPGLSIRDRMLGMNVVGVVILVGLRVEK 739
G + E V GK++++ +S+YP+KF+ + + W+Y L YGGG V GD+++ V CTAALTTQ STKVYK G+ ER+ Q L AR+ S ALLA++PDPVTCF A + Q Q F ++ G+SLVLVDW TSGR RGE W F +S N+I + PL D+++LE+ SI +RM G V+ +V+++G RV+K
Sbjct: 5 GAVVIEKVAGKSAVSRCFSKYPIKFIIPRKVGPSKTDAIWIYTLNYGGGIVSGDSISCELTVKDGCTAALTTQSSTKVYK------------SRGE-ERSEQLLEARIGSDALLAVLPDPVTCFATARYAQKQVFRVDSGSSLVLVDWFTSGRHGRGEIWEFNLFKSTNQIFLED------------GHPLFFDTVLLEQGSTNSIIERMHGYQVIAMVVILGPRVKK 207
BLAST of mRNA_F-serratus_M_contig111.1049.1 vs. uniprot
Match: A0A835RAA5_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835RAA5_VANPL) HSP 1 Score: 159 bits (402), Expect = 2.240e-41 Identity = 94/245 (38.37%), Postives = 138/245 (56.33%), Query Frame = 2
Query: 44 QKVRPTGELSFEHVQGKTSITTAYSRYPLKFVSATRACQG--GCAWVYFLGYGGGAVCGDNVTVRCHVNQDCTAALTTQGSTKVYKRTARTRDSRVLGGEGDCERASQSLLARVCSGALLAMVPDPVTCFEDASFRQHQRFLLERGASLVLVDWITSGRMSRGEGWAFERLESRNEIMTQSLAEAERQDQAGAWEPLVLDSLILEEIPGLSIRDRMLGMNVVGVVILVGLRVEKAVSALLQREAR 772
+K TG ++ E ++GKT++T +S+YPLK + +AC WV L YGGG V GD + V ++ CT ALTTQ STKVYK D + + Q L A+V LLA++PDPVTCF +A + Q Q F + ++LV+VDWITSGR GE W FE +S N+I A EPL++DS++LE+ +S+ +RM VV ++I++G ++ K + +Q E +
Sbjct: 3 EKREETGFVAVEKIEGKTTVTRCFSKYPLKLIVPRKACSSTSDAVWVCSLSYGGGIVSGDRILVALNIGDGCTMALTTQASTKVYKAV-------------DSKCSEQILEAKVQRNGLLAVIPDPVTCFSNAIYSQKQFFWVSSDSNLVIVDWITSGRHESGEIWDFELYKSSNKIFLD------------ANEPLLIDSVLLEQASTVSVAERMKDYQVVAMIIVMGPKL-KPIQDQIQMEVK 221
BLAST of mRNA_F-serratus_M_contig111.1049.1 vs. uniprot
Match: UPI001CC44933 (urease accessory protein D isoform X1 n=3 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC44933) HSP 1 Score: 158 bits (400), Expect = 4.030e-41 Identity = 100/231 (43.29%), Postives = 132/231 (57.14%), Query Frame = 2
Query: 59 TGELSFEHVQGKTSITTAYSRYPLKFVSATRACQGGCA-----WVYFLGYGGGAVCGDNVTVRCHVNQDCTAALTTQGSTKVYKRTARTRDSRVLGGEGDCERASQSLLARVCSGALLAMVPDPVTCFEDASFRQHQRFLLERGASLVLVDWITSGRMSRGEGWAFERLESRNEIMTQSLAEAERQDQAGAWEPLVLDSLILEEIPGLSIRDRMLGMNVVGVVILVGLRVE 736
TG L E V+GK+++T +S+YPLKF+ ++A GC+ WVY L YGGG V GD+++ + CTAALTTQ STKVYK G CE Q L R+ S ALLA++PDPVTCF A + Q Q F + +SLV+VDWITSGR RGE W F +S N+I + EPL LDS++LE SI +RM VV ++I +G +V+
Sbjct: 3 TGILVVEKVRGKSTVTRCFSKYPLKFIVPSKA---GCSKTDAVWVYSLTYGGGIVSGDSISCTLTIGDGCTAALTTQASTKVYKSV----------GSKCCE---QFLEVRIGSDALLAVIPDPVTCFSTARYSQKQVFRVASDSSLVIVDWITSGRHERGEKWDFGLYKSTNQIFLEK------------DEPLFLDSVLLEAGSITSIAERMQDYQVVAMIIFLGPKVK 205
BLAST of mRNA_F-serratus_M_contig111.1049.1 vs. uniprot
Match: A0A2P5D283_PARAD (Urease accessory protein UreD n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5D283_PARAD) HSP 1 Score: 156 bits (395), Expect = 2.120e-40 Identity = 121/342 (35.38%), Postives = 168/342 (49.12%), Query Frame = 2
Query: 59 TGELSFEHVQGKTSITTAYSRYPLKFVSATRA--CQGGCAWVYFLGYGGGAVCGDNVTVRCHVNQDCTAALTTQGSTKVYKRTARTRDSRVLGGEGDCERASQSLLARVCSGALLAMVPDPVTCFEDASFRQHQRFLLERGASLVLVDWITSGRMSRGEGWAFERLESRNEIMTQSLAEAERQDQAGAWEPLVLDSLILEEIPGLSIRDRMLGMNVVGVVILVGLRVEKAVSALLQREARRRKRFPSGLEDPTKDAKPQRRSGDKTGQTKGEVEQEDVKKILTGKDKGRVLSSVSPLEGSGGEARCRGLVCRFAAERTEDCRTMLHEILLPLKHELGGRSPY 1078
+G+++ E V GK+++T YS+YPLKF+ + + W+Y L YGGG V GD+++ + CTA LTTQ STKVYK LG + + Q L ARV S ALLA++PDPVTCF A F Q Q F + G++L++VDW+TSGR GE W F+ +S N I + EPL LD+++LE+ SI +RML V+ +V+ G ++ K + +Q + R+ PT K QR S +T K SSV EG +G+V R A TE L L L+ LG SPY
Sbjct: 3 SGKVAVEKVGGKSTVTRCYSKYPLKFIVPNKVGNSKTDAVWIYSLTYGGGIVSGDSISCNFAIGDGCTAVLTTQASTKVYKS---------LGSKS----SEQVLEARVGSNALLAVIPDPVTCFSTARFTQKQVFRMACGSNLIMVDWVTSGRHESGEKWDFDLYKSTNHIFLED------------DEPLFLDTVLLEKGSLSSIAERMLDYQVIAMVVFWGPKL-KYIQNQVQEDVRKMMTEQLKFSSPTSTHKRQRTSDH----------------CIT-KPNFIASSSVFGPEG-------KGVVVRIVATTTESVYIFLRHQLASLEPLLGV-SPY 293
BLAST of mRNA_F-serratus_M_contig111.1049.1 vs. uniprot
Match: UPI0005D32C76 (urease accessory protein D n=1 Tax=Amborella trichopoda TaxID=13333 RepID=UPI0005D32C76) HSP 1 Score: 156 bits (395), Expect = 2.350e-40 Identity = 117/337 (34.72%), Postives = 174/337 (51.63%), Query Frame = 2
Query: 77 EHVQGKTSITTAYSRYPLKFVSATR--ACQGGCAWVYFLGYGGGAVCGDNVTVRCHVNQDCTAALTTQGSTKVYKRTARTRDSRVLGGEGDCERASQSLLARVCSGALLAMVPDPVTCFEDASFRQHQRFLLERGASLVLVDWITSGRMSRGEGWAFERLESRNEIMTQSLAEAERQDQAGAWEPLVLDSLILEEIPGLSIRDRMLGMNVVGVVILVGLRVEKAVSALLQREARRRKRFPSGLEDPTKDAKPQRRSGDKTGQTKGEVEQEDVKKILT-GKDKGRVLSSVSPLEGSGGEARCRGLVCRFAAERTEDCRTMLHEILLPLKHELGGRSPY 1078
+ V G++++T +++YPLK +S T+ +C+ WVY + +GGG V GD+V+ V DCTA LTTQ STKVY+ D + + QSL RV AL+A++P PVTCF A ++Q Q F + R +SLV+VDW+TSGR GE WAF S N I++ +DQ +PL+LDSL+LE+ + M V+ ++IL+G + E V +Q + +++ G+ +K R D+ D+K LT G+ + +++S S + GLV R AA T L E L L+ LG SPY
Sbjct: 9 DKVGGRSTLTRCFAKYPLKLISPTKVGSCKSDVVWVYMVSFGGGMVSGDHVSCAMSVGDDCTAVLTTQASTKVYRAV-------------DSKSSDQSLQVRVGCNALVAVLPHPVTCFATAKYKQKQVFSVSRSSSLVVVDWVTSGRYECGEKWAFNSYNSTNHIIS-------NEDQ----QPLLLDSLVLEQGSSMKGTYGMQDYQVIAMIILLGHKFEH-VQNEIQEKVKKKMSEEFGMRLTSK------RQHDR-----------DMKPDLTYGRSRPELIASCSTFG-----PKDAGLVIRVAATTTGLVYKFLKEHLASLEPLLGA-SPY 297
BLAST of mRNA_F-serratus_M_contig111.1049.1 vs. uniprot
Match: A0A6P5GP70_ANACO (urease accessory protein D n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GP70_ANACO) HSP 1 Score: 156 bits (395), Expect = 4.380e-40 Identity = 91/228 (39.91%), Postives = 128/228 (56.14%), Query Frame = 2
Query: 59 TGELSFEHVQGKTSITTAYSRYPLKFVSATR--ACQGGCAWVYFLGYGGGAVCGDNVTVRCHVNQDCTAALTTQGSTKVYKRTARTRDSRVLGGEGDCERASQSLLARVCSGALLAMVPDPVTCFEDASFRQHQRFLLERGASLVLVDWITSGRMSRGEGWAFERLESRNEIMTQSLAEAERQDQAGAWEPLVLDSLILEEIPGLSIRDRMLGMNVVGVVILVGLRVE 736
TG E V+G++++T +S+YPLK + + + W+Y L YGGG V GD V+ R V CTAA+TTQ STKVYK D + + Q L AR+ ALLA++PDPVTCF A + Q Q F L ++LV+VDWITSGR GE W FE S N I + +PL LDS++LE+ +SI +RM +V+ +V+++G R++
Sbjct: 28 TGMARVEKVRGRSTVTRCFSKYPLKLILPKKVGSVHVDAVWIYTLSYGGGIVSGDRVSCRISVGDGCTAAMTTQASTKVYKSV-------------DSKCSEQILAARIGKDALLAVIPDPVTCFSTARYSQKQVFRLFSDSNLVVVDWITSGRHESGEKWDFEHYRSTNHIFLEE------------EQPLFLDSVVLEQKSSVSIAERMQQYHVIAMVVILGPRLK 230 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig111.1049.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig111.1049.1 >prot_F-serratus_M_contig111.1049.1 ID=prot_F-serratus_M_contig111.1049.1|Name=mRNA_F-serratus_M_contig111.1049.1|organism=Fucus serratus male|type=polypeptide|length=358bp MMLSGQKVRPTGELSFEHVQGKTSITTAYSRYPLKFVSATRACQGGCAWVback to top mRNA from alignment at F-serratus_M_contig111:746950..752159+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig111.1049.1 ID=mRNA_F-serratus_M_contig111.1049.1|Name=mRNA_F-serratus_M_contig111.1049.1|organism=Fucus serratus male|type=mRNA|length=5210bp|location=Sequence derived from alignment at F-serratus_M_contig111:746950..752159+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig111:746950..752159+ >mRNA_F-serratus_M_contig111.1049.1 ID=mRNA_F-serratus_M_contig111.1049.1|Name=mRNA_F-serratus_M_contig111.1049.1|organism=Fucus serratus male|type=CDS|length=2148bp|location=Sequence derived from alignment at F-serratus_M_contig111:746950..752159+ (Fucus serratus male)back to top |