mRNA_F-serratus_M_contig111.1046.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig111.1046.1 vs. uniprot
Match: D7FXW6_ECTSI (ABC transporter ATP-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW6_ECTSI) HSP 1 Score: 760 bits (1963), Expect = 8.130e-250 Identity = 555/1243 (44.65%), Postives = 698/1243 (56.15%), Query Frame = 2
Query: 248 NWFLKRPDGSSQGPHGLAQLLEWSNAGYVPPDAQVRWGMGGAPQPLSTVL---RNDDERRGRFVGNAPYGGDRGRVENDASSDEGGYDYRAAAQQRWQAQGGGEDSENRRAYRSPPRPVHTRPPSPSLPLHAAKKEF--VMRRRVTAVEGGRWAESVAAARSTIGSIFKVRGTSRRRSRGAAGGRG--------------GRYPQG----GRXXPGFHQERPPYGGNTGPRYGGPQGTSNMRDHRRVGGSEEWIPDARRAPGQGQGRGDQWGNMDNLGVDVDAVDSRSAPPQPPVEASAGEQRSSAAP-----DENGARGTKGSFXXXXXXXXXXXXXXXXHLP-PGSDWAQEEGRQTPWGGDGHSKGGDGGILENPSHAGVEAPYPQPSLPQQKQQLLSE-QPLPRSGEDVDDDFPRFSENLAGSGMPPSSDFSRVGMASEDAPSASGGLNPKDVEDFYASQ-QLDHDNGNRDGTDRVSPRKKKRWGRRANDLSREELRALGLDYGDSDS-------------------AGPSEGRPGPQAGKIAVTSMKLRYMEGWRGEAEKGGSFATLRGLIGSSIYGVFLPIKAVACLTPVGAARVLARALGVLPLFLWWLFSVAMGALPATVAWFGSRLLAKLSEVTAGRYTFSPAEFSETRSACLKLSYWQIGAGLAVALMAGLEQGWLRPVSRKRSAALAHGALAHVYVAGGRVDDRPSAAEFRELSLAPWAFTCEAMKLWRALTGVAVAVAFLHLVWPVRGPAALGEGGAVVVLLMESLSLWLS----GAPDRAAGDSHAAFAVTEELASFTQGGAVASSEAEARGLRKVLLERRSSLLEAASEGLPKKGRRHRQGVAASVTAGTAIRGLLAWVAGGLGVAYALLAVVEEELSFHFGGDRIVLAAAQTWLAHTSLHRALRCLGQLAILRPSAARMNALVLQGTDDPYNETGVARDSGPATKSGWTNDGPEVSDGLRLEGVSLTPRGRKMPALSGIDLHAPAGSVVAVVGGAGAGKTCLLQLVLGLVRADAGGASFQGRPLEEWETSAYRERVAWLNQARPKYPLLSSLVAARFALTAGENIGAGDPTAFSDRQRWELAAGMSGASAAIESLPMGYDTPLEDGGCPGSATSSTRPTVSSGLSEGEWQRVQLSRFFMRADAARLLLLDEPFKGIDPVDASRMLAGLRAQARATGQVVLVASQDLSVGRWADMTVLLENGSVREAGTWDEMLARGGSFAAAVRGQNAL 3814
NW+L+ PDGSSQGP+GL+QL EWS AGYV D+QV+WG GG PQ LS+VL + YR HT + P A+ E+ +M RVTAVEGGRW+ESV+AA+ T +F V S R + GGRG GRYP G GR G+ Q R G YG P G S G W R + QG G +WG++ G +V+ S Q SSA P G XXX XXXXXXXXX +P P S Q+ G G G A P S+P++ PLP P +E + S + SS + A+ A +A GGL+P+++E FYA+Q + D+G G PRK+ WGRR D+ +E L A+GL+YG++D A S GR G+++V SMKL+Y EGW EAE G FA ++ + G SI + P KAV +TPV R+LARA GV PL LWW FSV G LP ++W SRL+ +L++ +AGRYT S + + E RSAC KL Q GAGL++ + AG+ +GWLRP +R+RSAA+ ALA V VAGG DRP +EFRELSLAPW++ + M+L R + GVA VA L VWP RGP LG GGA V+LL+ES+ L GA + G S A + + GGAVA++EAEARGLRKVLL + S++LEAA ++GR+ R +T + +RG + W+ YAL++VVEEEL+F FG R+ L Q WLA+ SL AL LGQ+A LR +AARM A+ L ++ G +++G T+ GW+NDGPE +DGLRL+GVS TP GR ALS +DLHAPAGSVVAV+GGAGAGKT LLQL LGL++AD G A FQGRPL+EWET AYRERVAWL+Q V+ RF LTAGENIGAGDP+ FS+R+ W AAG+SGA+ AIESLP+GYDT LEDG SGLSEGEWQR+QL+RF MRAD A+LLLLDEPFKG+ P +ASRMLA L AQARATGQVV+VASQDLS+GRWAD TV LE+GSV E+G WD++LA GG FA AVR +A
Sbjct: 39 NWYLRAPDGSSQGPYGLSQLGEWSRAGYVSADSQVQWGAGGPPQALSSVLGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPYR------HTGGRGSARPGGGARDEWGSLMSERVTAVEGGRWSESVSAAKGTFKKLFSVGRKSDNRRKRVNGGRGSGRXXXXXXXXXXXGRYPPGARGPGRGGRGYPQGR-------GSSYGAPPGGS---------GDGGWNSGGRXSX-YXQGGG-EWGDVQGTG-EVNQGGSWQT----------NSQASSAQPLSQQXXXXXXXXAGGVSPPXXXLAXXXXXXXXXXVPSPVSPELQDGEGGXXXQGVAWDAAGSGSXXXXXXVA------PPSSIPEEXXXXXXXXNPLPGQ-------MPPSAEGYSSSPLG-SSGAAHSSPAAPAAGAAMGGLDPREIEAFYAAQKEYGADSGPAAGD--AQPRKRMGWGRRGKDIPKENLAAMGLNYGEADREPVRERSPRRRGRSGWFGFAKGSRGRREVLGGRVSVDSMKLKYEEGWNVEAEGEGVFAAVKSVAGRSISRMTSPSKAVTSMTPVAGVRLLARAGGVFPLLLWWAFSVMRGVLPVVMSWLVSRLMHRLADFSAGRYTLSTSHYRECRSACFKLLGQQAGAGLSLGVAAGVVRGWLRPRARERSAAVCRRALAGVSVAGGT--DRPPPSEFRELSLAPWSYMQQVMELSRGVAGVAAVVAVLQTVWPFRGPVTLG-GGAAVLLLLESIRTLLGTEDPGAAEVRGGGSDVA-EPSGGIHGGASGGAVANAEAEARGLRKVLLSKNSAVLEAAEH---QEGRKSR-----IITTRSVVRGSVTWLVMSAFAVYALVSVVEEELAFQFGTARVTLLITQVWLAYASLQGALSGLGQVARLRSTAARMQAIALARPENG----GGGKETGLGTEGGWSNDGPEAADGLRLQGVSFTPSGRTRQALSSVDLHAPAGSVVAVLGGAGAGKTALLQLALGLMKADKGEAMFQGRPLQEWETGAYRERVAWLSQ-----------VSGRFGLTAGENIGAGDPSEFSNRELWARAAGLSGANTAIESLPLGYDTLLEDGXX---XXXXXXXXXXSGLSEGEWQRLQLARFLMRADVAKLLLLDEPFKGVSPSEASRMLAALGAQARATGQVVVVASQDLSLGRWADATVYLEDGSVSESGRWDDLLASGGPFATAVREHDAF 1200
BLAST of mRNA_F-serratus_M_contig111.1046.1 vs. uniprot
Match: A0A6H5KVL8_9PHAE (ABC transporter domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVL8_9PHAE) HSP 1 Score: 494 bits (1272), Expect = 2.490e-152 Identity = 396/939 (42.17%), Postives = 507/939 (53.99%), Query Frame = 2
Query: 575 RSPPRPVHTRPPSPSLPLHAAKKEF--VMRRRVTAVEGGRWAESVAAARSTIGSIFKVRGTSRRRSRGAAGGRG--------------GRYPQG----GRXXPGFHQERPPYGGNTGPRYGGPQGTSNMRDHRRVGGSEEWIPDARRAPGQGQGRGDQWGNMDNLGVDVDAVDSRSAPPQPPVEASAGEQRSSAAPDENGARGTKGSFXXXXXXXXXXXXXXXXHLPPGSDWAQEEGRQTPWGGDGHSKGGDGGILENPSHAGVEAPYPQPSLPQQKQQLLSEQPLPRSGEDVDDDFPRFSENLAGSGMPPSSDFSRVGMASEDAPSAS---GGLNPKDVEDFYASQ-QLDHDNGNRDGTDRVSPRKKKRWGRRANDLSREELRALGLDYGDSDSAGPSEGRPGPQA-------------------GKIAVTSMKLRYMEGWRGEAEKGGSFATLRGLIGSSIYGVFLPIKAVACLTPVGAARVLARALGVLPLFLWWLFSVAMGALPATVAWFGSRLLAKLSEVTAGRYTFSPAEFSETRSACLKLSYWQIGAGLAVALMAGLEQGWLRPVSRKRSAALAHGALAHVYVAGGRVDDRPSAAEFRELSLAPWAFTCEAMKLWRALTGVAVAVAFLHLVWPVRGPAALGEGGAVVVLLMESLSLWLSGAPDRAAGDSHAAFAVTEELASF---TQGGAVASSEAEARGLRKVLLERRSSLLEAASEGLPKKGRRHRQGVAASVTAGTAIRGLLAWVAGGLGVAYALLAVVEEELSFHFGGDRIVLAAAQTWLAHTSLHRALRCLGQLAILRPSAARMNALVLQGTDDPYNETGVARDSGPATKSGWTNDGPEVSDGLRLEGVSLTPRGRKMPALSGIDLHAPAGSVVAVVGGAGAGKTCLLQLVLGLVRADAGGASFQGRPLEEWETSAYRERVAWLNQA 3253
R P RP R + P A+ E+ +M RVTAVEGGRW+ESV+AA+ T +F V S R + GGRG GRYP G GR G+ Q R G YG G+ G W R G QG G +WG + G V+ DS Q + G QR A D G+ GS XXXXXXXXXXXXXXXX +G+ P P+ S PL SG +S AP+A GGL+P+++E FYA+Q + D+G G PRK+ GRR D+ +E+L A+GL+YG++D E P + G+++V SMKL+Y EGW E E G FA ++ + G SI + P KAV +TPV R+LARA GV+PL LWW FSV G LP ++W SRL+ +L++ +AGRYT S +++ E RSAC KL Q GAGL++A+ AG+ +GWLRP +R+RSAAL ALA V VAGG D+P +EFRELSLAPW++ + M+L R + GVA VA L VWP RGP LG GGA V+LL+E + L+ AA + V E GGAVAS+EAEARGLR+VLL + S++LEAA ++GR+ R +T + +RG + W+ YAL++VVEEEL+F FG R+ L Q WLA+ SL AL LGQ+A LRP+AARM A+ L ++ +G +D+G T+ GW+NDGPE DGLRL GVS P GR ALS +DLHAPAGSVVAV+GGAGAGKT LLQL LGL++AD G A FQGRPL+EWET AYRERVAWL+QA
Sbjct: 30 RQPYRPTGGR--GSARPGGGARDEWGSLMSERVTAVEGGRWSESVSAAKGTFKKLFTVGRKSDNRRKRVNGGRGSGRXXXXXXXXXXXGRYPLGARDPGRGGRGYPQGR-------GSSYGASPGSI---------GDGGWNSGG-RGSGYXQGIG-EWGGVQAAGG-VNQGDSWQTNSQELRDGEGGVQRQGVAWDAAGS----GSDXXXXXXXXXXXXXXXXXXXXXXXXXXFQGQMPP-----------------PAEG------------------YSPSPLGSSG---------------------------AAHSSPAAPAAGATMGGLDPREIEAFYAAQKEYGADSGPAAGD--AQPRKRVGRGRRGKDIPKEDLTAMGLNYGEADREPVRERSPRRRGRRRWFGFAKGSRVRREVLGGRVSVDSMKLKYEEGWNVETEGEGVFAAVKSVAGRSISRMTSPSKAVTSMTPVACVRLLARAGGVIPLLLWWAFSVMRGVLPVVMSWLVSRLMHQLADFSAGRYTLSTSQYRECRSACFKLLGQQAGAGLSLAVAAGVVRGWLRPRARERSAALCRRALAGVSVAGGI--DQPPPSEFRELSLAPWSYMQQVMELSRDVAGVAAVVAVLQTVWPFRGPVTLG-GGATVLLLLEGIRTLLATEDPGAAEVRGSGSDVAEPSGGIPGGASGGAVASAEAEARGLRQVLLSKYSAVLEAAEH---QEGRKSR-----IITTRSVVRGSVTWLVMAAFAVYALVSVVEEELAFQFGTARVTLVITQVWLAYASLQGALSGLGQVARLRPTAARMQAIALAWPEN----SGGEKDTGLGTEGGWSNDGPEADDGLRLLGVSFRPSGRTRQALSSVDLHAPAGSVVAVLGGAGAGKTALLQLALGLMKADEGEAMFQGRPLQEWETGAYRERVAWLSQA 864
BLAST of mRNA_F-serratus_M_contig111.1046.1 vs. uniprot
Match: A0A538QRJ4_9DELT (ABC transporter ATP-binding protein n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A538QRJ4_9DELT) HSP 1 Score: 167 bits (422), Expect = 1.850e-39 Identity = 112/274 (40.88%), Postives = 148/274 (54.01%), Query Frame = 2
Query: 2966 GWTNDGPEVSDGLRLEGVSLTPRGRKMPALSGIDLHAPAGSVVAVVGGAGAGKTCLLQLVLGLVRADAGGASFQGRPLEEWETSAYRERVAWLNQARPKYPLLSSLVAARFALTAGENIGAGDPTAFSDRQRWELAAGMSGASAAIESLPMGYDTPLEDGGCPGSATSSTRPTVSSGLSEGEWQRVQLSRFFMRADAARLLLLDEPFKGIDPVDASRMLAGLRAQARATGQVVLVASQDLSVGRWADMTVLLENGSVREAGTWDEMLARGGSFA 3787
G + GP DG+R EGVS T G + PALSGIDLH P GS +A+VG G+GKT L++L+ L G + GR L EW SA R+ + Q R+ L GENIGAGD A+ DRQRW AA A+ IE+LP YDT L G + R LS G+WQ+V LSR FMR DA +L+LDEP +D A+ + R + ++ +V S S R AD ++L+ G V E G+ DE++A+GG +A
Sbjct: 332 GTASAGPRPGDGVRFEGVSFTYPGSRQPALSGIDLHIPPGSKLAIVGENGSGKTTLIKLLTRLYEPSEGRITLDGRDLREWSPSALHRRIGVIFQDF-----------VRYQLKVGENIGAGDDRAYEDRQRWADAAERGLAAPIIETLPEHYDTQL------GKWFKNGRE-----LSLGQWQKVALSRSFMRRDAD-VLVLDEPTASMDA--AAEVAIFERFRELTDDKIAIVISHRFSTVRMADQIIVLDRGCVIERGSHDELVAQGGRYA 580
BLAST of mRNA_F-serratus_M_contig111.1046.1 vs. uniprot
Match: A0A7W0Y8R6_9DELT (ABC transporter ATP-binding protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W0Y8R6_9DELT) HSP 1 Score: 155 bits (392), Expect = 1.850e-38 Identity = 110/288 (38.19%), Postives = 147/288 (51.04%), Query Frame = 2
Query: 2924 ETGVARDSGPATKSGWTNDGPEVSDGLRLEGVSLTPRGRKMPALSGIDLHAPAGSVVAVVGGAGAGKTCLLQLVLGLVRADAGGASFQGRPLEEWETSAYRERVAWLNQARPKYPLLSSLVAARFALTAGENIGAGDPTAFSDRQRWELAAGMSGASAAIESLPMGYDTPLEDGGCPGSATSSTRPTVSSGLSEGEWQRVQLSRFFMRADAARLLLLDEPFKGIDPVDASRMLAGLRAQARATGQVVLVASQDLSVGRWADMTVLLENGSVREAGTWDEMLARGGSFA 3787
ET SG ATK GP+ DG+R EGVS G + PA+SGIDLH P GS +A+VG G+GKT L++L+ + G S G L EW A R+ + Q R+ T GENIGAGD + DR RWE AA A IE+LP YDT L G + R LS G+WQ+V L+R FMR DA +L+LDEP +D R+ R ++ +V S S R AD ++L+ G++ E G+ DE++A+ G +A
Sbjct: 2 ETPTIAPSGSATK------GPKPGDGVRFEGVSFHYPGWREPAISGIDLHIPPGSKLAIVGENGSGKTTLIKLLTRMYEPTEGRISLDGLDLREWSQPALHRRIGVIFQDF-----------VRYQFTVGENIGAGDDRGYDDRTRWETAAEHGLAKPIIETLPDRYDTQL------GRWFKNGRE-----LSLGQWQKVALARSFMREDAD-ILVLDEPTASMDAEAEVRIFERFRELT--DDKIAIVISHRFSTVRMADEIIVLDRGAIIERGSHDELVAQNGRYA 258
BLAST of mRNA_F-serratus_M_contig111.1046.1 vs. uniprot
Match: A0A7W0V8P4_9DELT (ABC transporter ATP-binding protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W0V8P4_9DELT) HSP 1 Score: 153 bits (386), Expect = 2.420e-37 Identity = 106/274 (38.69%), Postives = 142/274 (51.82%), Query Frame = 2
Query: 2966 GWTNDGPEVSDGLRLEGVSLTPRGRKMPALSGIDLHAPAGSVVAVVGGAGAGKTCLLQLVLGLVRADAGGASFQGRPLEEWETSAYRERVAWLNQARPKYPLLSSLVAARFALTAGENIGAGDPTAFSDRQRWELAAGMSGASAAIESLPMGYDTPLEDGGCPGSATSSTRPTVSSGLSEGEWQRVQLSRFFMRADAARLLLLDEPFKGIDPVDASRMLAGLRAQARATGQVVLVASQDLSVGRWADMTVLLENGSVREAGTWDEMLARGGSFA 3787
G +G DG+R E VS G + AL +DLH P GS +A+VG G+GKT L++L+ L G + GR L EW SA R+ + Q R+ LT GENIGAGD AF+DR RWE AA A IESLP YDT L G + R LS G+WQ+V L+R FMR DA +L+LDEP +D ++ R ++ +V S S R AD ++L+ GS+ E G+ DE++A+GG +A
Sbjct: 37 GTETEGTVPRDGVRFEKVSFQYPGSREYALERVDLHIPPGSKLAIVGENGSGKTTLIKLLTRLYEPTEGRITLDGRDLREWSPSALHRRIGVIFQDF-----------VRYQLTVGENIGAGDDHAFTDRDRWEDAAERGLAKPVIESLPETYDTQL------GRWFKNGRE-----LSLGQWQKVALARSFMRKDAD-ILVLDEPTASMDAEAEVKIFERFREVTE--DKIAIVISHRFSTVRMADQIIVLDRGSIIERGSHDELVAKGGRYA 285
BLAST of mRNA_F-serratus_M_contig111.1046.1 vs. uniprot
Match: A0A2D9T127_9DELT (ABC transporter permease n=1 Tax=Sandaracinus sp. TaxID=2024858 RepID=A0A2D9T127_9DELT) HSP 1 Score: 159 bits (402), Expect = 7.110e-37 Identity = 104/279 (37.28%), Postives = 141/279 (50.54%), Query Frame = 2
Query: 2951 PATKSGWTNDGPEVSDGLRLEGVSLTPRGRKMPALSGIDLHAPAGSVVAVVGGAGAGKTCLLQLVLGLVRADAGGASFQGRPLEEWETSAYRERVAWLNQARPKYPLLSSLVAARFALTAGENIGAGDPTAFSDRQRWELAAGMSGASAAIESLPMGYDTPLEDGGCPGSATSSTRPTVSSGLSEGEWQRVQLSRFFMRADAARLLLLDEPFKGIDPVDASRMLAGLRAQARATGQVVLVASQDLSVGRWADMTVLLENGSVREAGTWDEMLARGGSFA 3787
P G +GP DGLRLE V G+ P + G+ LH G+ +A+VG GAGKT L++L+ GL + G G PL EW+ A RER+ + Q R+ LT GEN+GAGD TAF D RW LAA A I+ LP G+ T L G LS G+WQ++ LSR FMR + A+LL+LDEP +D + + R ++ ++ S S R AD V+L+ G + E GT +E+LA GG +A
Sbjct: 333 PDRVGGTATEGPSPGDGLRLEDVRFAYPGKTTPTIDGVTLHLEPGTKLALVGSNGAGKTTLIKLIAGLYQPTGGRVLLDGLPLGEWDPIALRERIGVIFQDF-----------VRYQLTVGENVGAGDVTAFDDETRWALAAEKGMADDFIDGLPGGFGTQLGKWFADGQE-----------LSGGQWQKLALSRAFMR-EGAQLLILDEPTAAMDAEAEAEIFERFRQLTE--DRMAILISHRFSTVRMADRIVVLDQGRIVEEGTHEELLAAGGRYA 586
BLAST of mRNA_F-serratus_M_contig111.1046.1 vs. uniprot
Match: A0A3M3LCK1_PSECA (ABC transporter ATP-binding/permease protein n=1 Tax=Pseudomonas cannabina TaxID=86840 RepID=A0A3M3LCK1_PSECA) HSP 1 Score: 141 bits (355), Expect = 1.030e-33 Identity = 100/265 (37.74%), Postives = 132/265 (49.81%), Query Frame = 2
Query: 2996 DGLRLEGVSLTPRGRKMPALSGIDLHAPAGSVVAVVGGAGAGKTCLLQLVLGLVRADAGGASFQGRPLEEWETSAYRERVAWLNQARPKYPLLSSLVAARFALTAGENIGAGDPTAFSDRQRWELAAGMSGASAAIESLPMGYDTPLEDGGCPGSATSSTRPTVSSGLSEGEWQRVQLSRFFMRADAARLLLLDEPFKGIDPVDASRMLAGLRAQARATGQVVLVASQDLSVGRWADMTVLLENGSVREAGTWDEMLARGGSFAA 3790
DG+R E VS T G PAL IDLH G VA+VG G+GKT L++L+ L R D G G L+EW+ A R R+ + Q +Y L GEN+G GD AF D RW AA A+ IE L GY T L G LS G+WQ++ LSR +MR DA +L+LDEP +D + + R A+ G++ L+ S S R A+ V+LE+G V E G D ++A G +AA
Sbjct: 4 DGMRFENVSFTYPGTSRPALEHIDLHLAPGRSVALVGENGSGKTTLIKLLTRLYRPDQGRILLDGSDLQEWDEDALRSRIGVIFQDFIRYQFL-----------VGENLGVGDTHAFHDETRWREAAAQGMAAQFIEQLDKGYATQLGRWFAGGQE-----------LSGGQWQKIALSRAYMRRDAD-ILILDEPTAALDAGAEAAVFDHFREYAK--GRMTLLISHRFSSVRNAEHIVVLEHGRVLERGDHDSLIAAAGRYAA 243
BLAST of mRNA_F-serratus_M_contig111.1046.1 vs. uniprot
Match: A0A1I1U165_9DELT (ATP-binding cassette, subfamily B n=2 Tax=Nannocystis TaxID=53 RepID=A0A1I1U165_9DELT) HSP 1 Score: 145 bits (365), Expect = 3.680e-32 Identity = 100/277 (36.10%), Postives = 142/277 (51.26%), Query Frame = 2
Query: 2954 ATKSGWTNDGPEVSDGLRLEGVSLTPRGRKMPALSGIDLHAPAGSVVAVVGGAGAGKTCLLQLVLGLVRADAGGASFQGRPLEEWETSAYRERVAWLNQARPKYPLLSSLVAARFALTAGENIGAGDPTAFSDRQRWELAAGMSGASAAIESLPMGYDTPLEDGGCPGSATSSTRPTVSSGLSEGEWQRVQLSRFFMRADAARLLLLDEPFKGIDPVDASRMLAGLRAQARATGQVVLVASQDLSVGRWADMTVLLENGSVREAGTWDEMLARGGSF 3784
A SG GP+ SDG+R E V T G P L + H G +A+VG G+GKT L++L+ L AG GR L EW+T+A R RV + Q AR+ L GENIGAGD TAF DR+RW +A + I+ +P Y+T L G R LS G+WQ++ LSR FMR+ A +L+LDEP +D +++ +R ++ ++V++ S S R AD ++L G + EAG ++ARGG +
Sbjct: 341 AAPSGTATSGPDPSDGIRFEHVGFTYPGAAAPTLHDVSFHIRPGQSLALVGENGSGKTTLIKLLTRLYDPTAGQILLDGRDLREWDTTALRRRVGVIFQDF-----------ARYQLKVGENIGAGDVTAFEDRERWRESAQKGMSEDFIKDMPKQYETQL------GRLFKEGRE-----LSGGQWQKIALSRAFMRS-GADVLVLDEPTAAMDAEAEAQVFEHVRNLSK--DRMVILISHRFSTVRAADHIIVLHGGRILEAGDHASLMARGGRY 592
BLAST of mRNA_F-serratus_M_contig111.1046.1 vs. uniprot
Match: UPI00079C8A80 (ABC transporter ATP-binding protein/permease n=1 Tax=Pseudomonas psychrotolerans TaxID=237610 RepID=UPI00079C8A80) HSP 1 Score: 134 bits (337), Expect = 2.530e-31 Identity = 93/264 (35.23%), Postives = 130/264 (49.24%), Query Frame = 2
Query: 2996 DGLRLEGVSLTPRGRKMPALSGIDLHAPAGSVVAVVGGAGAGKTCLLQLVLGLVRADAGGASFQGRPLEEWETSAYRERVAWLNQARPKYPLLSSLVAARFALTAGENIGAGDPTAFSDRQRWELAAGMSGASAAIESLPMGYDTPLEDGGCPGSATSSTRPTVSSGLSEGEWQRVQLSRFFMRADAARLLLLDEPFKGIDPVDASRMLAGLRAQARATGQVVLVASQDLSVGRWADMTVLLENGSVREAGTWDEMLARGGSFA 3787
DGLR EGV T G P L I H G +A+VG G+GKT L++L+ L G G L++W+ +A R+ + Q R+ L+AGEN+G GD AF+D RW AA A I L GY+T L G LS G+WQ++ LSR +MR +A +L+LDEP +D + + RAQA+ ++ L+ S S R AD ++LE G +RE G ++LA GG +A
Sbjct: 3 DGLRFEGVGFTYPGATAPTLQDISFHLAPGQSLALVGANGSGKTTLIKLLTRLHAPTRGRILLDGSDLQDWQPAALHRRIGVIFQDF-----------IRYQLSAGENLGVGDTAAFNDETRWRKAAEQGLADEVISGLRQGYETQLGRWFMGGQE-----------LSGGQWQKIALSRAYMREEAD-ILVLDEPTAALDAAAEAVIFERFRAQAQQ--RMTLLISHRFSSVRNADQILVLEGGEIRERGDHAQLLANGGRYA 241
BLAST of mRNA_F-serratus_M_contig111.1046.1 vs. uniprot
Match: A0A5E6ZXR2_PSEFL (Lipid A export ATP-binding/permease protein MsbA n=2 Tax=Pseudomonas fluorescens TaxID=294 RepID=A0A5E6ZXR2_PSEFL) HSP 1 Score: 139 bits (349), Expect = 4.240e-31 Identity = 96/269 (35.69%), Postives = 129/269 (47.96%), Query Frame = 2
Query: 2981 GPEVSDGLRLEGVSLTPRGRKMPALSGIDLHAPAGSVVAVVGGAGAGKTCLLQLVLGLVRADAGGASFQGRPLEEWETSAYRERVAWLNQARPKYPLLSSLVAARFALTAGENIGAGDPTAFSDRQRWELAAGMSGASAAIESLPMGYDTPLEDGGCPGSATSSTRPTVSSGLSEGEWQRVQLSRFFMRADAARLLLLDEPFKGIDPVDASRMLAGLRAQARATGQVVLVASQDLSVGRWADMTVLLENGSVREAGTWDEMLARGGSFA 3787
G DGLR E V G AL GIDLH G VA+VG G+GKT L++L+ L R D G G L+ WE R R+ + Q R+ + GENIG GD AF+D QRW+ AA A+ IE L GY T G LS G+WQ++ LSR +MR +A +L+LDEP +DP + + G++ L+ S S R AD ++L+ GS+ E G D ++A GG +A
Sbjct: 187 GAVPGDGLRFENVGFRYPGASRAALEGIDLHLVPGHSVALVGENGSGKTTLIKLLARLYRPDQGRILLDGSDLQAWEEDTLRRRIGVIFQDY-----------IRYQFSVGENIGVGDTLAFNDEQRWQAAAAEGMAAPFIERLDRGYATQFGRWFAGGQE-----------LSGGQWQKIALSRAYMRREAD-ILILDEPTSALDPAAEAAVFEHFSEHTE--GRMTLLISHRFSSVRNADHIIVLDQGSILERGDHDSLVAAGGRYA 430 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig111.1046.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig111.1046.1 >prot_F-serratus_M_contig111.1046.1 ID=prot_F-serratus_M_contig111.1046.1|Name=mRNA_F-serratus_M_contig111.1046.1|organism=Fucus serratus male|type=polypeptide|length=1237bp MCCLSIVALVVASIAIQDRLSATAATATTVGGGAAAAGVGGSGGASENWFback to top mRNA from alignment at F-serratus_M_contig111:659284..679613+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig111.1046.1 ID=mRNA_F-serratus_M_contig111.1046.1|Name=mRNA_F-serratus_M_contig111.1046.1|organism=Fucus serratus male|type=mRNA|length=20330bp|location=Sequence derived from alignment at F-serratus_M_contig111:659284..679613+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig111:659284..679613+ >mRNA_F-serratus_M_contig111.1046.1 ID=mRNA_F-serratus_M_contig111.1046.1|Name=mRNA_F-serratus_M_contig111.1046.1|organism=Fucus serratus male|type=CDS|length=7422bp|location=Sequence derived from alignment at F-serratus_M_contig111:659284..679613+ (Fucus serratus male)back to top |