mRNA_F-serratus_M_contig111.1033.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig111.1033.1
Unique NamemRNA_F-serratus_M_contig111.1033.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig111.1033.1 vs. uniprot
Match: A0A4S4LPF2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4LPF2_9AGAM)

HSP 1 Score: 185 bits (470), Expect = 1.190e-47
Identity = 101/296 (34.12%), Postives = 156/296 (52.70%), Query Frame = 1
Query:    1 KVGQNGRVVKYKCRFVAQGLRQVKGIHYRELSPPTPT*SGIRMTLVVMSLLDWEGRQLNVEMTFLEANVAEEFYVELPNGYRD--SPNQIVRLEKVMYGLMHAGLLWSKKFGGEMLAKGFERSQADPC*FVWKHLGKVVVIIVVYVDDVLVLSETKQEKHQALEDLRFSSHIKDLGEFSYYRGCHITRDRKARTVMFDQQRYVQTVTERFEIRKVSVIPFSTVRAPLWKANWPQKDAEIAEIEEMRGIPYREAVVALRWVANTARPDLAYIAHTLAKFGDNPGPEHWKAVMKALQY 882
            K G +G ++KYK R VAQG  QV GI Y +   P      IR  L + +  DWE  Q++V+  +L  ++ E  ++E P G+    +  ++  L K +YGL  +   W KK     L  GF R   D   F WK +GK +++I   VDD+ + S   +      ++L  +  + DLGE S+  G  I RD+KARTV   Q+ ++ T+  RF +      P ST   P +  N  Q  +   + EEMRG+P++EA+ ++ + A   RPD+A+    L++F  NPG  HW+ V + L+Y
Sbjct:  401 KRGADGEIIKYKARLVAQGFTQVPGIDYSDTFAPVAKLESIRALLAIAARNDWEIHQMDVKNAYLNGDLEETIFMEQPPGFTTPGAAEKVCHLFKTIYGLKQSSRRWYKKLCDAFLKLGFTRCSVDHGVF-WKCVGKDILVIAASVDDLAIFSSALRLLESLKDELNKAFEMTDLGEISWLLGIEIRRDQKARTVALSQRAFIDTIVSRFNLENAK--PLSTPLDPSFPLNKTQCPSTPRQYEEMRGVPFQEAIGSVMYAARRTRPDIAFSVTYLSQFMQNPGKAHWEGVKRVLRY 693          
BLAST of mRNA_F-serratus_M_contig111.1033.1 vs. uniprot
Match: A0A2P6Q6P3_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6Q6P3_ROSCH)

HSP 1 Score: 179 bits (453), Expect = 4.470e-47
Identity = 102/299 (34.11%), Postives = 166/299 (55.52%), Query Frame = 1
Query:    1 KVGQNGRVVKYKCRFVAQGLRQVKGIHYRELSPPTPT*SGIRMTLVVMSLLDWEGRQLNVEMTFLEANVAEEFYVELPNGYRDSPNQ--IVRLEKVMYGLMHAGLLWSKKFGGEMLAKGFERSQADPC*FVWKHLGKVVVIIVVYVDDVLVLSETKQEKHQALEDLRFSSHIKDLGEFSYYRGCHITRDRKARTVMFDQQRYVQTVTERFEIRKVSVIPFSTVRAPL---WKANWPQKDAEIAEIEEMRGIPYREAVVALRWVANTARPDLAYIAHTLAKFGDNPGPEHWKAVMKALQY 882
            K  +N ++ K+K R V +G  Q +GI + E+  P    + IR+ L + + +D E  QL+V+  FL  ++ EE Y+E P G+     Q  + +L+K +YGL  A   W KKF   M+  G++R+ ADPC ++ +  G   +I+++YVDD+L++ +      +   DL  S  +KDLG      G  ITRDR+A+ +   Q+RYV+ V ERF +++       +V +PL   +K +         E ++M GIPY  AV +L +     RPD+A+    ++++  NPG EHW+AV   L+Y
Sbjct:   35 KRDENEQLTKFKARLVVKGFGQKEGIDFDEIFSPVVKMTSIRIILGMAASMDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVERKQHMVCKLKKSLYGLKQAPRQWYKKFDSFMVGHGYKRTDADPCVYLQRFTGGNFIILLLYVDDMLIVGKDVSMIRKLKADLSKSFDMKDLGPAKQILGMEITRDRQAKKLWLSQERYVERVLERFNMKEAK-----SVSSPLGNHFKLSRLSCPTTQVEKDKMAGIPYSSAVGSLMYAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILKY 328          
BLAST of mRNA_F-serratus_M_contig111.1033.1 vs. uniprot
Match: A0A2P6SP23_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6SP23_ROSCH)

HSP 1 Score: 182 bits (461), Expect = 4.030e-46
Identity = 103/299 (34.45%), Postives = 167/299 (55.85%), Query Frame = 1
Query:    1 KVGQNGRVVKYKCRFVAQGLRQVKGIHYRELSPPTPT*SGIRMTLVVMSLLDWEGRQLNVEMTFLEANVAEEFYVELPNGYRDSPNQ--IVRLEKVMYGLMHAGLLWSKKFGGEMLAKGFERSQADPC*FVWKHLGKVVVIIVVYVDDVLVLSETKQEKHQALEDLRFSSHIKDLGEFSYYRGCHITRDRKARTVMFDQQRYVQTVTERFEIRKVSVIPFSTVRAPL---WKANWPQKDAEIAEIEEMRGIPYREAVVALRWVANTARPDLAYIAHTLAKFGDNPGPEHWKAVMKALQY 882
            K  +N ++ K+K R V +G  Q +GI + E+  P    + IR+ L + + +D E  QL+V+  FL  ++ EE Y+E P G+     Q  + +L+K +YGL  A   W KKF   M+  G++R+ ADPC ++ +  G   +I+++YVDD+L++ +     H+   DL  S  +KDLG      G  ITRDR+A+ +   Q+RYV+ V ERF +++       +V +PL   +K +         E ++M GIPY  AV +L +     RPD+A+    ++++  NPG EHW+AV   L+Y
Sbjct:  874 KRDENEQLTKFKARLVVKGFGQKEGIDFDEIFSPVVKMTSIRIILGMAASMDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVEGKQHMVCKLKKSLYGLKQAPRQWYKKFDSFMVGHGYKRTDADPCVYLQRFTGGNFIILLLYVDDMLIVGKDVSMIHKLKADLSKSFDMKDLGPAKQILGMEITRDRQAKKLWLSQERYVERVLERFNMKEAK-----SVSSPLGNHFKLSRLSCPTTQVEKDKMAGIPYSSAVGSLMYAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILKY 1167          
BLAST of mRNA_F-serratus_M_contig111.1033.1 vs. uniprot
Match: UPI001F00A048 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F00A048)

HSP 1 Score: 178 bits (452), Expect = 5.810e-45
Identity = 100/289 (34.60%), Postives = 163/289 (56.40%), Query Frame = 1
Query:   19 RVVKYKCRFVAQGLRQVKGIHYRELSPPTPT*SGIRMTLVVMSLLDWEGRQLNVEMTFLEANVAEEFYVELPNGYRDSPNQIV-RLEKVMYGLMHAGLLWSKKFGGEMLAKGFERSQADPC*FVWKHLGKVVVIIVVYVDDVLVLSETKQEKHQALEDLRFSSHIKDLGEFSYYRGCHITRDRKARTVMFDQQRYVQTVTERFEIRKVSVIPFSTVRAPLWKANWPQKDAEIAEIEEMRGIPYREAVVALRWVANTARPDLAYIAHTLAKFGDNPGPEHWKAVMKALQY 882
            +VVKYK R V +G +Q KGI + E+  P    + IR+ L +++ ++ E  Q++V+  FL   + EE Y+E P G+  S + +V +L+K +YGL  A   W KKF   M ++G++++ AD C ++ K      V +++YVDD+L++ +  ++ +Q  ++L  S  +KDLG      G  ITRDRK R +   Q++Y++ V  RF +      P S   A  +K +     +   EI EM  +PY  AV +L +     RPD+A+    +++F  NPG EHW+AV   L+Y
Sbjct:  705 KVVKYKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGMVASMNLELEQMDVKTAFLHGGLDEEIYMEQPEGFEVSGDNLVCKLKKSLYGLKQAPRQWYKKFDSCMTSQGYKKTSADECVYIQKFSDGNFVALLLYVDDILIVGKDAKKINQLKKELSKSFDMKDLGPAQQILGMQITRDRKNRRLWLSQEKYIERVLARFNMNNAK--PVSIPLANHFKLSKRSCPSSKEEIGEMSSVPYSSAVGSLMYAMVCTRPDIAHAVGKVSRFLSNPGKEHWEAVKWILRY 991          
BLAST of mRNA_F-serratus_M_contig111.1033.1 vs. uniprot
Match: A0A5N6NCI1_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NCI1_9ASTR)

HSP 1 Score: 169 bits (429), Expect = 3.120e-44
Identity = 99/297 (33.33%), Postives = 157/297 (52.86%), Query Frame = 1
Query:    1 KVGQNGRVVKYKCRFVAQGLRQVKGIHYRELSPPTPT*SGIRMTLVVMSLLDWEGRQLNVEMTFLEANVAEEFYVELPNGYRDSPNQ--IVRLEKVMYGLMHAGLLWSKKFGGEMLAKGFERSQADPC*FVWKHLGKVVVIIVVYVDDVLVLSETKQEKHQALEDLRFSSHIKDLGEFSYYRGCHITRDRKARTVMFDQQRYVQTVTERFEIRKVSVIPFSTVRAPLWKA-NWPQKDAEIAEIEEMRGIPYREAVVALRWVANTARPDLAYIAHTLAKFGDNPGPEHWKAVMKALQY 882
            K+  NG V ++K R VA+G  Q +GI Y+E   P      +R+ + +++  D E  Q++V+  FL   + E+ Y+  P G++    +  + +L+K  YGL  A   W  KF   M   GF  +Q D C ++ K  G    I+V+YVDD+L+ S +    H++   L  +  +KDLGE SY  G  I RDR + T+   Q+ Y+  V  R+ ++  S +    V+  ++     P+ + E    E+MR IPY   V ++ +     RPD+AYIA  L ++  NPG +HWKA  K L+Y
Sbjct:   89 KLDPNGNVERFKARLVAKGYTQKEGIDYQETFSPVSQKDSLRIVMALVAHFDLELHQMDVKTAFLNGELYEDVYMTQPEGFKPKGKEHLVCKLKKSTYGLKQASRQWYLKFDEVMKKHGFVMNQVDQCNYL-KMSGSNFAILVIYVDDILLASNSLDMLHESKRLLSSNFDMKDLGEASYVIGIEIHRDRASGTLGLSQKAYINRVLTRYNMQHCSPLVAPVVKGDVFGTFQCPKTEVEK---EQMRLIPYASVVGSIMYANVCTRPDIAYIAGMLGRYQSNPGLDHWKATKKVLRY 381          
BLAST of mRNA_F-serratus_M_contig111.1033.1 vs. uniprot
Match: A0A5A7QRB1_STRAF (Gag-pol polyprotein n=2 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QRB1_STRAF)

HSP 1 Score: 173 bits (439), Expect = 3.050e-43
Identity = 104/299 (34.78%), Postives = 162/299 (54.18%), Query Frame = 1
Query:    1 KVGQNGRVVKYKCRFVAQGLRQVKGIHYRELSPPTPT*SGIRMTLVVMSLLDWEGRQLNVEMTFLEANVAEEFYVELPNGY--RDSPNQIVRLEKVMYGLMHAGLLWSKKFGGEMLAKGFERSQADPC*FVWKHL-GKVVVIIVVYVDDVLVLSETKQEKHQALEDLRFSSHIKDLGEFSYYRGCHITRDRKARTVMFDQQRYVQTVTERFEIR--KVSVIPFSTVRAPLWKANWPQKDAEIAEIEEMRGIPYREAVVALRWVANTARPDLAYIAHTLAKFGDNPGPEHWKAVMKALQY 882
            K G +G+V  +K R VA+G  Q++GI Y E   P      IR+ L V + +D+E  Q++V+  FL  N+ E+ Y++ P G+      + + +L + +YGL  A   W+ +F   + + GF +   + C  V+K + G VVV +V+YVDD+L++  +K+E       L     +KDLGE  +  G  + RDRK R +   Q  Y+ TV  RF ++  K  ++PF     PL K   P+   EI   EEM+ +PY  AV +L +     RPD++Y    +A++  NPG EHW AV   L+Y
Sbjct:  845 KRGLDGKVQTFKARLVAKGYTQIEGIDYDETFSPVAMLKSIRILLAVAAHMDYEVWQMDVKTAFLNGNLQEDIYMQQPEGFIAEGREHLVCKLNRSIYGLKQASRSWNIRFDEVIQSYGFTQCPDEHC--VYKKISGSVVVFLVLYVDDILLIGNSKKELSDVKVWLSKQFDMKDLGEAGHILGIRLIRDRKKRMLCLSQSSYIDTVLARFSMQDSKKGMLPFRH-GIPLSKEMSPKTSKEI---EEMKTVPYASAVGSLMYAMLCTRPDISYAVGMVARYQSNPGREHWSAVKHILKY 1137          
BLAST of mRNA_F-serratus_M_contig111.1033.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 173 bits (439), Expect = 3.160e-43
Identity = 93/294 (31.63%), Postives = 156/294 (53.06%), Query Frame = 1
Query:    1 KVGQNGRVVKYKCRFVAQGLRQVKGIHYRELSPPTPT*SGIRMTLVVMSLLDWEGRQLNVEMTFLEANVAEEFYVELPNGYRDSPNQIVRLEKVMYGLMHAGLLWSKKFGGEMLAKGFERSQADPC*FVWKHLGKVVVIIVVYVDDVLVLSETKQEKHQALEDLRFSSHIKDLGEFSYYRGCHITRDRKARTVMFDQQRYVQTVTERFEIRKVSVIPFSTVRAPLWKANWPQKDAEIAEIEEMRGIPYREAVVALRWVANTARPDLAYIAHTLAKFGDNPGPEHWKAVMKALQY 882
            K  + G+VVKYK R VAQG  Q+ G+ + E   P      IR  L +  + +WE  Q++V+  +L  ++ EE Y+  P G+ D   +I RL K +YGL  +G  W++K   E+   G++R +ADPC ++W+     V II V+VDD+L+ + + +   +   DL+    + DLGE     G  I RDR+A  +   QQ Y++++ +R+++   + +         + A    ++A+    + + G  Y   V +L + A   RPD++Y   TL+K+   P P HW A  + L+Y
Sbjct:  960 KTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGKIQISQQHYIESILKRYQLENANAVGMPLDPNVAFTAEDENEEAD----DRLAG-GYASMVGSLMYAAVGTRPDISYAVQTLSKYTACPRPVHWTAAKRVLRY 1248          
BLAST of mRNA_F-serratus_M_contig111.1033.1 vs. uniprot
Match: A0A2N9IWX1_FAGSY (Uncharacterized protein n=7 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IWX1_FAGSY)

HSP 1 Score: 171 bits (434), Expect = 1.380e-42
Identity = 99/290 (34.14%), Postives = 157/290 (54.14%), Query Frame = 1
Query:   19 RVVKYKCRFVAQGLRQVKGIHYRELSPPTPT*SGIRMTLVVMSLLDWEGRQLNVEMTFLEANVAEEFYVELPNGY--RDSPNQIVRLEKVMYGLMHAGLLWSKKFGGEMLAKGFERSQADPC*FVWKHLGKVVVIIVVYVDDVLVLSETKQEKHQALEDLRFSSHIKDLGEFSYYRGCHITRDRKARTVMFDQQRYVQTVTERFEIRKVSVIPFSTVRAPLWKANWPQKDAEIAEIEEMRGIPYREAVVALRWVANTARPDLAYIAHTLAKFGDNPGPEHWKAVMKALQY 882
            ++VKYK R V +G  Q +GI + E+  P    S IR+ L + + LD E  Q++V+  FL  ++ EE Y+  P G+  +   +++ RL+K +YGL  A   W KKF   M+ +G+ R+ AD C +V +      +I+++YVDD+L++ +         ++L  S  +KDLG      G  I RDRKA+ +   Q++YV+ V ERF ++     P ST     +K +     +   E E M  IPY  AV +L +     RPD+A+    +++F  NPG EHW+AV    +Y
Sbjct:  846 KLVKYKARLVVKGFNQKQGIDFDEIFSPVVKMSSIRVILGLTASLDLELEQMDVKTAFLHGDLEEEIYMVQPEGFEAKGKEHKVCRLKKSLYGLKQAPRQWYKKFDSFMVGQGYTRTDADHCVYVRQFPNGKFIILLLYVDDMLIVGQDANMVGSLKKELFKSFDMKDLGPARQILGMQILRDRKAKKLWLSQEKYVERVLERFNMKHAK--PVSTPLGGHFKLSKKSCPSSNKEKENMASIPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFMVNPGKEHWEAVKWIFRY 1133          
BLAST of mRNA_F-serratus_M_contig111.1033.1 vs. uniprot
Match: A0A2N9FZK6_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FZK6_FAGSY)

HSP 1 Score: 171 bits (434), Expect = 1.470e-42
Identity = 99/290 (34.14%), Postives = 157/290 (54.14%), Query Frame = 1
Query:   19 RVVKYKCRFVAQGLRQVKGIHYRELSPPTPT*SGIRMTLVVMSLLDWEGRQLNVEMTFLEANVAEEFYVELPNGY--RDSPNQIVRLEKVMYGLMHAGLLWSKKFGGEMLAKGFERSQADPC*FVWKHLGKVVVIIVVYVDDVLVLSETKQEKHQALEDLRFSSHIKDLGEFSYYRGCHITRDRKARTVMFDQQRYVQTVTERFEIRKVSVIPFSTVRAPLWKANWPQKDAEIAEIEEMRGIPYREAVVALRWVANTARPDLAYIAHTLAKFGDNPGPEHWKAVMKALQY 882
            ++VKYK R V +G  Q +GI + E+  P    S IR+ L + + LD E  Q++V+  FL  ++ EE Y+  P G+  +   +++ RL+K +YGL  A   W KKF   M+ +G+ R+ AD C +V +      +I+++YVDD+L++ +         ++L  S  +KDLG      G  I RDRKA+ +   Q++YV+ V ERF ++     P ST     +K +     +   E E M  IPY  AV +L +     RPD+A+    +++F  NPG EHW+AV    +Y
Sbjct: 1097 KLVKYKARLVVKGFNQKQGIDFDEIFSPVVKMSSIRVILGLTASLDLELEQMDVKTAFLHGDLEEEIYMVQPEGFEAKGKEHKVCRLKKSLYGLKQAPRQWYKKFDSFMVGQGYTRTDADHCVYVRQFPNGKFIILLLYVDDMLIVGQDANMVGSLKKELFKSFDMKDLGPARQILGMQILRDRKAKKLWLSQEKYVERVLERFNMKHAK--PVSTPLGGHFKLSKKSCPSSNKEKENMASIPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFMVNPGKEHWEAVKWIFRY 1384          
BLAST of mRNA_F-serratus_M_contig111.1033.1 vs. uniprot
Match: A0A2N9H5C1_FAGSY (Integrase catalytic domain-containing protein n=5 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9H5C1_FAGSY)

HSP 1 Score: 171 bits (433), Expect = 1.800e-42
Identity = 102/297 (34.34%), Postives = 161/297 (54.21%), Query Frame = 1
Query:    1 KVGQNG-RVVKYKCRFVAQGLRQVKGIHYRELSPPTPT*SGIRMTLVVMSLLDWEGRQLNVEMTFLEANVAEEFYVELPNGY--RDSPNQIVRLEKVMYGLMHAGLLWSKKFGGEMLAKGFERSQADPC*FVWKHLGKVVVIIVVYVDDVLVLSETKQEKHQALEDLRFSSHIKDLGEFSYYRGCHITRDRKARTVMFDQQRYVQTVTERFEIRKVSVIPFSTVRAPLWKANWPQKDAEIAEIEEMRGIPYREAVVALRWVANTARPDLAYIAHTLAKFGDNPGPEHWKAVMKALQY 882
            K+ +NG ++VKYK R V QG  Q +GI + E+  P    S IR+ L + + LD E  Q++V+  FL  ++ EE Y+    G+  +   +++ RL+K +YGL  A   W KKF   M+ +G+ R+ A+ C +V K      +I+++YVDD+L++ +         ++L  S  +KDLG      G  I RDRKA+ +   Q++YV+ V ERF ++     P ST     +K +     +   E E M  IPY  AV +L +     RPD+A+    +++F  NPG EHW+AV    +Y
Sbjct:  727 KLKKNGEKLVKYKARLVVQGFNQKQGIDFDEIFSPVVKMSSIRVILGLTASLDLELEQMDVKTAFLHGDLEEEIYMVQLEGFEAKGKEHKVCRLKKSLYGLKQAPRQWYKKFDSFMVGQGYTRTDANHCVYVRKFPNGKFIILLLYVDDMLIVGQDANMVGSLKKELFKSFDMKDLGPARQILGMQILRDRKAKKLWLSQEKYVERVLERFNMKHAK--PVSTPLGGHFKLSKKSCPSSNKEKENMASIPYSSAVGSLMYAMVCTRPDIAHAVSVVSRFMVNPGKEHWEAVKWIFRY 1021          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig111.1033.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4S4LPF2_9AGAM1.190e-4734.12Integrase catalytic domain-containing protein n=1 ... [more]
A0A2P6Q6P3_ROSCH4.470e-4734.11Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]
A0A2P6SP23_ROSCH4.030e-4634.45Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]
UPI001F00A0485.810e-4534.60DDE-type integrase/transposase/recombinase n=1 Tax... [more]
A0A5N6NCI1_9ASTR3.120e-4433.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5A7QRB1_STRAF3.050e-4334.78Gag-pol polyprotein n=2 Tax=Striga asiatica TaxID=... [more]
A0A401GYH9_9APHY3.160e-4331.63Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
A0A2N9IWX1_FAGSY1.380e-4234.14Uncharacterized protein n=7 Tax=Fagus sylvatica Ta... [more]
A0A2N9FZK6_FAGSY1.470e-4234.14Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A2N9H5C1_FAGSY1.800e-4234.34Integrase catalytic domain-containing protein n=5 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig111contigF-serratus_M_contig111:146556..147914 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score69.3
Seed ortholog evalue1.2e-09
Seed eggNOG ortholog164328.Phyra85763
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QGIS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons1
Model size1359
Cds size309
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig111.1033.1prot_F-serratus_M_contig111.1033.1Fucus serratus malepolypeptideF-serratus_M_contig111 147135..147443 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928992.775014-UTR-F-serratus_M_contig111:146555..1471341622928992.775014-UTR-F-serratus_M_contig111:146555..147134Fucus serratus maleUTRF-serratus_M_contig111 146556..147134 +
1690962660.1040602-UTR-F-serratus_M_contig111:146555..1471341690962660.1040602-UTR-F-serratus_M_contig111:146555..147134Fucus serratus maleUTRF-serratus_M_contig111 146556..147134 +
1622928992.8053489-UTR-F-serratus_M_contig111:147443..1479141622928992.8053489-UTR-F-serratus_M_contig111:147443..147914Fucus serratus maleUTRF-serratus_M_contig111 147444..147914 +
1690962660.1267984-UTR-F-serratus_M_contig111:147443..1479141690962660.1267984-UTR-F-serratus_M_contig111:147443..147914Fucus serratus maleUTRF-serratus_M_contig111 147444..147914 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928992.787379-CDS-F-serratus_M_contig111:147134..1474431622928992.787379-CDS-F-serratus_M_contig111:147134..147443Fucus serratus maleCDSF-serratus_M_contig111 147135..147443 +
1690962660.1164782-CDS-F-serratus_M_contig111:147134..1474431690962660.1164782-CDS-F-serratus_M_contig111:147134..147443Fucus serratus maleCDSF-serratus_M_contig111 147135..147443 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig111.1033.1

>prot_F-serratus_M_contig111.1033.1 ID=prot_F-serratus_M_contig111.1033.1|Name=mRNA_F-serratus_M_contig111.1033.1|organism=Fucus serratus male|type=polypeptide|length=103bp
MFDQQRYVQTVTERFEIRKVSVIPFSTVRAPLWKANWPQKDAEIAEIEEM
RGIPYREAVVALRWVANTARPDLAYIAHTLAKFGDNPGPEHWKAVMKALQ
YA*
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mRNA from alignment at F-serratus_M_contig111:146556..147914+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig111.1033.1 ID=mRNA_F-serratus_M_contig111.1033.1|Name=mRNA_F-serratus_M_contig111.1033.1|organism=Fucus serratus male|type=mRNA|length=1359bp|location=Sequence derived from alignment at F-serratus_M_contig111:146556..147914+ (Fucus serratus male)
AAGGTCGGCCAGAATGGTCGTGTAGTAAAGTACAAGTGCCGCTTCGTGGC CCAGGGTTTGCGCCAGGTCAAGGGGATTCACTACCGAGAGTTATCGCCGC CGACACCCACATAGTCGGGCATCCGGATGACGCTGGTGGTGATGTCCCTG TTGGACTGGGAGGGGCGGCAGCTTAACGTAGAAATGACGTTTCTCGAGGC GAATGTTGCGGAGGAGTTCTACGTTGAGCTCCCCAACGGGTATCGCGACT CGCCGAACCAGATTGTACGACTGGAGAAGGTCATGTATGGCCTGATGCAC GCCGGACTACTGTGGTCGAAGAAGTTCGGCGGAGAGATGTTAGCGAAGGG GTTCGAGAGGTCCCAAGCCGATCCCTGCTAGTTTGTGTGGAAGCATCTGG GGAAGGTCGTTGTCATCATCGTGGTCTACGTCGACGATGTACTAGTGCTG AGCGAAACGAAGCAGGAAAAGCATCAGGCGCTGGAAGACCTTCGGTTCAG CTCTCACATCAAGGATCTAGGGGAGTTCTCATACTACCGGGGATGTCACA TTACTCGAGACCGCAAGGCGAGGACGGTGATGTTCGATCAGCAGCGTTAC GTGCAGACGGTAACCGAGCGATTCGAAATTCGGAAGGTTAGCGTGATCCC TTTTTCTACGGTGAGAGCGCCACTTTGGAAGGCAAATTGGCCGCAGAAAG ACGCTGAGATCGCTGAGATCGAAGAGATGCGCGGCATCCCGTATCGCGAG GCAGTGGTTGCACTAAGGTGGGTAGCCAACACGGCTCGGCCTGACCTCGC TTACATCGCGCACACGCTTGCCAAGTTCGGTGACAACCCTGGGCCCGAGC ACTGGAAGGCGGTAATGAAAGCGCTGCAGTATGCCTGAAACGGACGGTGA GCCTACGGGTAACATATGGCGGCACGACGGAGGACGACATGAAGCTATCG GTGTGAATGGACGTCGGTCACGCAACATGCCCAGATACGCGCCGCTCGGT ATCGGAGGGCGTGGTGATGCTCAGTAGAGGGGCAATCAGGGGGTTTCCGC GAGCGCAGAGAGTAACCGCGACAGCGACGTCTGAATCGGAGTACGGCGCA CTGGCGGAGATATTGAATGAGTTACGTTTCCTTGGGCAGATGAACGCGTT TATGGTACCTCCAATCGACTATAACATCCGTGTTCACGAGGACAACGAGG GCGCTATAAAGATGGAAAATAACACGTTTAGCAGCCGACGAACAAGACAC ATCGACGTGAAGCATCATACGGTTTCGGAATGCCGTCGATGGAGGAATAA TCCGCGTAGAGTACGTCAAGTCGGGAGAACAGCATGCGGACGTACCGACT AGAGCGATA
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Coding sequence (CDS) from alignment at F-serratus_M_contig111:146556..147914+

>mRNA_F-serratus_M_contig111.1033.1 ID=mRNA_F-serratus_M_contig111.1033.1|Name=mRNA_F-serratus_M_contig111.1033.1|organism=Fucus serratus male|type=CDS|length=618bp|location=Sequence derived from alignment at F-serratus_M_contig111:146556..147914+ (Fucus serratus male)
ATGTTCGATCAGCAGCGTTACGTGCAGACGGTAACCGAGCGATTCGAAAT
TCGGAAGGTTAGCGTGATCCCTTTTTCTACGGTGAGAGCGCCACTTTGGA
AGGCAAATTGGCCGCAGAAAGACGCTGAGATCGCTGAGATCGAAGAGATG
CGCGGCATCCCGTATCGCGAGGCAGTGGTTGCACTAAGGTGGGTAGCCAA
CACGGCTCGGCCTGACCTCGCTTACATCGCGCACACGCTTGCCAAGTTCG
GTGACAACCCTGGGCCCGAGCACTGGAAGGCGGTAATGAAAGCGCTGCAG
TATGCCTGAATGTTCGATCAGCAGCGTTACGTGCAGACGGTAACCGAGCG
ATTCGAAATTCGGAAGGTTAGCGTGATCCCTTTTTCTACGGTGAGAGCGC
CACTTTGGAAGGCAAATTGGCCGCAGAAAGACGCTGAGATCGCTGAGATC
GAAGAGATGCGCGGCATCCCGTATCGCGAGGCAGTGGTTGCACTAAGGTG
GGTAGCCAACACGGCTCGGCCTGACCTCGCTTACATCGCGCACACGCTTG
CCAAGTTCGGTGACAACCCTGGGCCCGAGCACTGGAAGGCGGTAATGAAA
GCGCTGCAGTATGCCTGA
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