mRNA_F-serratus_M_contig111.1029.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig111.1029.1 vs. uniprot
Match: D7G285_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G285_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 1.740e-15 Identity = 95/302 (31.46%), Postives = 140/302 (46.36%), Query Frame = 3
Query: 375 ETVEKLASESQDLAKAWERTREIMDFSINENLHDLAYSIARGRVVERIANMGGSSIIGASGSEQGGDR--GRSRTRESISAG-------PPPSAGGDISRLLADYERSVGRLGSTGETVPSAPGTVPACGEIVR----GEDAPVLTGFDLMAALTSRDIGSVKDRLCEVHDLAAEQETTLDDLYEEMTRMMDNNHRLALKLIDREKELEMVKEALVIATEGGLVGDAPSSSSGDGVMASSAPAASVSAFASSAYLSPSFSASDPPPLELVSTGMTPPPRPRPPLSASATEERLKHYRRYSGI 1241
+TV +A + + L AW++TR MDF+++E+L +AYS+A RV + + G + + E R RSRTR + S PPPS+ +SR S GEI R ED +TGFDL AAL S I + L ++DLAA+QE LD++ E ++ N +L+LKL D+ KE+E++K+A +A E +S + + A A + S A +A P P LE VS+GMTP R +H R +SG+
Sbjct: 51 QTVATVAGDLEGLVHAWDKTRGAMDFTVDESLRTVAYSVAENRVHTDLRDRGIEIVDDSRAKESKSWRHSDRSRTRSTSSXXXXXXXXXPPPSS---LSRXXXXXXXXXXXXXXXXXXXFSG-------GEIARHEEEDEDGLQVTGFDLRAALKSESISETRRFLRVLYDLAAQQELMLDEMAREGMYAIELNDKLSLKLADKRKEVEVLKKAYFLAIETDPAAAWDTSDNNNNGAAKITAATTDSPGAGAAESLPGAE----PTLEAVSSGMTPXXXXXXXXXXXXXXXRREHSRAFSGM 338 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig111.1029.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig111.1029.1 >prot_F-serratus_M_contig111.1029.1 ID=prot_F-serratus_M_contig111.1029.1|Name=mRNA_F-serratus_M_contig111.1029.1|organism=Fucus serratus male|type=polypeptide|length=854bp MVLAGASEQNGLHDVSPPEVPSVSPSGINCSEPGVSCSEPGGQKDEADQYback to top mRNA from alignment at F-serratus_M_contig111:77196..87132- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig111.1029.1 ID=mRNA_F-serratus_M_contig111.1029.1|Name=mRNA_F-serratus_M_contig111.1029.1|organism=Fucus serratus male|type=mRNA|length=9937bp|location=Sequence derived from alignment at F-serratus_M_contig111:77196..87132- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig111:77196..87132- >mRNA_F-serratus_M_contig111.1029.1 ID=mRNA_F-serratus_M_contig111.1029.1|Name=mRNA_F-serratus_M_contig111.1029.1|organism=Fucus serratus male|type=CDS|length=5124bp|location=Sequence derived from alignment at F-serratus_M_contig111:77196..87132- (Fucus serratus male)back to top |