mRNA_F-serratus_M_contig111.1028.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig111.1028.1 vs. uniprot
Match: D7G286_ECTSI (Centrin-1, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G286_ECTSI) HSP 1 Score: 1131 bits (2926), Expect = 0.000e+0 Identity = 1041/2863 (36.36%), Postives = 1355/2863 (47.33%), Query Frame = 1
Query: 1 RDLLTAPAWISAPDLSPVDLSQTQTFPVDKKARPRKRRWRDDWRELIIVASPYSRPRPTAEVAKGAHAEHGVSVTQDAPPGLDERVSASSDSVVPKECCHYVPQRYLIGHGDNGGERRVEAERGSHRTQLEAVREPSDGA----RFIRCTLHSKAHLS---LSSVIVRPFSTPAG----LAPSSDSGAIDRLRGKPWSSPAAAHPLKSPKRRARSNVATGSPGYNGGGDCSGIERRAQSGNESSRRRLAAFLWKQNSDEAGEGTGTEHRLTKSISGTAEVERPENASSVAFHAVSSAERAFGVGGNKLVSATPSQSMTANFVGLVTRCLGRGIWVDHVASQLARPLDAILAYLPPEGAGLLVESGRRFILSGVSGGSNEY--GNPFEDDTLAGGQSQTETMTKGEAPVTAATVAKVKVETNIRGSSGGGGRIVIATPPLQGHPRQRRSVSTNVNSSSSFFSLTATMDKGGPTAEVPGAVWLGRVAAVMEARGDKDEAVRLYGEASAAVTTVEEPASGVGRSGWDRCRQEEEGAITRVGCIFGDGGGSDNSDHPAGVYGKCMNNRGSR--------NLFPYSARVHHLASMIEHAYERHFRRRTVAQIRVAAAFRGFLVRAGRRLDQRHKDRAAGVVRXXXXXXXXXXXXXXXXXXXXXXXXRGRRR-REWLLLVKARVTAVQSRARVLLAKKKVRRMRLEKATATFLQALQRGQAVRGARAAAIADIQAELWRAALGMNRVGRGFLHRRFAAMVRQLAVDREIERSEAEAELVAGAKIVAIARVGVYLATAAGEMDLAREVRRAKAAAMSAKIRMRTASPAERRRRSALDTFDSFDIDGSGTIDVSELKPLLGALMDVHLTDAELEVASARVDADGKGDVSFSEFYDWYCSE-FYGDGIGGXXXXXXXSESCCHQTGHDNNCGISSTIDVATRRNKRRRGRRGNARRSPSLELMDASAPVVREASSPYGKRLPRRNSFSAIRVAYAKARHGFREAVGLDIQERARRAVTRRWVSAVAREAQARFRKARPPSLECCACQHAFALYGDYWRHLGGGKSSAGGPADLACPRRPGRGRLFQDLKAALIAEGELPRKEAEEREWTRFLDERAFLEEANLRAEATEEARITQKDCAGTHELAELAARRFDVISSKVR-----SGQSEG----------LQVAWMAFQQAFDRSGNGALEVSDLAELLRVLKGVGDHSD------GNGAR----GIESATEELNTNSNGKIDFDEFARWFFSNNSRTGQTFGDVVAD--SRGRS-----------IHDGSTAGGVKAQRNKSVR-----------------------------GPSERKDELGG---GEETRRLCRERGSSPQDFFTHPLSMTATTSMTSADE--QIKRAW-----------------------------------------------SQGWSIRAFSQFRGRFAPASTAT------AGATAASCKRRKKILWAVANQEAKTLLIRRAGLRAQVAELARFRAERPPEHSEWSVPESLEKSREPLREIAAETDALFVETLRRKLRRAEDTVERRSHGEGEGXXXXXXXSPPKDKGSSSSFAEKVKAAEVHPQ------------------LAVTPPLVAWQAPGAALQRGRGGGRGNALPITEHAHVRITWRAYSVRLSVARVVRCLKNGAAAARRRTFKTPVGRAEISLAVRRLNA------TTGNDSAEVAIGKQVLNVDGDSGWQEENVGPAAAMGAAAATAGGLKKGVSWRG--------DTGA--ASPMTSRTTDMRLFDLFDGELLVVRSRSSSLPLTERVIFFRLPPLPVADGSGLVDREELALLLRELGILASAQTIEGASSRLDPECSGDIRREEFCAWLDKDNGKVLRSTLSSRLLRAEQTARSLASSTRRLEHQARCRYLHMTSMMARARAIARAEFWEFVSYQGSPSSSTARRLVNPSVVATEVRGTTRSGRINAVSTGEVMAVPPRHDK-----PNP---------GDDGGDTTTED-LEEWVKEATDESVMEDGVVVLKRGRRGLAERVAGRRIRARREEREAEREAVMIGVEEEAERCERRRWRTPAGAEKLRWEEDFQIGAAWALEVALRAWDDADRTEARSVEPRGIIGVQQRRXXXXERRGEERVRHIFRLFDASCDGCIDAAELRRLLARLRVRVPEAEVEAVLRKVDGDATGYVDLAELLAWWREEGLPRT------VHSCATA-AAWISPAREARGDARRALLIRARXXXXXXXXXXXXXXXXXXXXXRGEAAVMAPRWSCGGAVSDGNSGTSAAYLAGSKDGGVSGA---------------GEHGGAA-GADGNNMHRNSRRVVVARASKLARAEASAYADIQATIRTPAGKRELVRRAAALQREWKADVAT---MCHETGRGSQQLVVTPLASSTGETPPRDLLGFAGKTKQNNASTFHPTERIDIF--PILRLVWGVHSSDRWPLVVTTGRAIVAPGGEVEPSELKYAGASLRS-LFGAKTKKI----MIIIGIY----SNGRNLNGVEAGTVVANPLYYQEEDNGVLSCRRSEGSECSKLDQRMTWYPNHMYGKPHVIVTASRTKQS------HTPSFNTRYSSAIANSPGPLSSWETGPFTAPCPWNLRRTPATAARLRFRLFLLRPCVLRDLARESMLAEARAFERHELARDIALEDGEPWCIAEKAAVMGRNSGTGSAAGEAATDVDRLRATVEGTARLARALAQGEDLAARECQSFLKTSAGRKELASGRVAARERRQGMVVRLAALNFESREAVACDRAQGPHGGLGALGHRLALASRDLGKDELRWAFALCEADGVPGEISRAEAAYVLEYAGIPQVAL 7869
RDL TAPAWI P LS VDL+QTQTFPVDKKARPRKRRW +DWREL+I ASPY++ A + A AE G S DA ++E+VS S VVP+E C P + + + V G+ T + + +DGA R I+ + S A +SS + P +T G + G + G P+S H + ++R ERR E SRRRLAAFL Q AE +P + S+ A A + FG+GG+ L PS+SMTANFVGL+ LG G+W D VASQLARPL+A+LAYLPPEGA L ESGRRF GGS+E P +++ A + + K A T + +K G GR P QG +S ++SS LT TM++G E P AVWLG+VAAVMEARGD+DEAVRLYGEA+A +T E AS R+G G GG + AG G R +LFPYSAR H+LAS+IE Y RHF RRT AQ AAAFRG L R G R D+ H+ AA V GRR+ RE +L++ ++A QS R+ LAK+ +RMRLE+A+A LQAL RG +R RA AI++I LWRAALG+NRV RGFLHRRFA MVRQ AVD EI R EAEA V GA +A R +YL T AG+++LA+E+RRAKAA + KI MR ASP ERRR SA D FDSFD+DGSGTID +ELK LLGAL V +T+AEL+V SA VDADG G++SFSEFY W+ F+G G G + N + S+ ++T R+ + +++A + S G PR + R + KAR R A G+ +Q+RARR+V RRWVS AREAQ RFR+A PP+LEC AC AFALYGDYWRH GGG+ E R+ ER+W R LDER+ L A LRAEA EEARI K AG HE A L AR +SS ++ SG SE VA +AFQ AFDR GNG L+VSDLA+LL VL+ + G+GA G+E+A ++ + +G++D DEF RWF ++ G + RGR + +G+T GG AQ ++ ++ D +G G+ +R ++ F + T+ + Q KR S + R+ ++ R R AP S + +TA KR K L AVA QEA+TLL+RRA LRAQV ELARFRA RPPE+ EWS P+ LEK RE + EI A+ D++FVE L R LR AE+ V+ HG + PP S+ +H LA +P +AW G RGGGRG + TW +A V+ + AAAARRR F+TP GRAEI+ AVRRL A T+ +A G + + G EE + A AG + +G +W D GA + + +T + + D V R PL + +L L ADGSG +DREELA LL +LGI +A+ WL+ + + R+ LS ++LRA Q+ ++ SSTRRLE Q R S++AR+RA ARAE W P+++ P+VVAT T A+ H++ PNP G++ ED + A E + V K R LA R GRR R EER+AERE V+ E+ AER +R+WRT AGA +L+ E D GA AL + LRAWD + + E G+ +R EE++RH+FRLFD SCDGCI A EL RLL+R+ V + EAE+ +L ++D D +G VD E AWW ++GL R+ + S A++ A ++P AR DARRAL+ RAR R S A + G + G + GG S A GE G G +G N++R+ AR+SKLARAEA AYAD+QA I T AGKREL RR L+ EW A + T + E+G G + S G + ++ K ++ +A T T I + PILR +WG+H S + + T A VEPSELKY GASLRS L G ++I + ++G + GR N V P +EE + + R+ G E T + +H + + + T +R + H PS SSA+ANS G + E P T +R AT A+L+ ++F P R LA++++LAE RAFERHELAR IALEDGEPW +AE A G SA G DVDRLRA G A+L RALA GE AAR GL L R+A A +L +DELR AFALCEADGVPGEISRAEAA+VL +AGIPQ L
Sbjct: 37 RDLSTAPAWIGFPGLSGVDLTQTQTFPVDKKARPRKRRWGEDWRELVIGASPYNKAAAKARAGRRARAERGASTAADARAEIEEKVSTSLLGVVPEEFCRDAPPA-VEPSSSSSSLKAVTVAAGARATN--SAEDAADGAGSGRRPIKIAVESSATTGSRDVSSSLAAPAATGGGDCVVAGAAHQRGLPTKASGPPYSDQQQQHASRPKRQRGXXXXXX---------XXXXXERR---NGERSRRRLAAFLEDQX---XXXXXXXXXXXXXXXXXRAEEGQPCDGSNSAVTAGRKDQTFFGLGGDALEPTPPSESMTANFVGLLEGSLGLGVWTDPVASQLARPLNAVLAYLPPEGARLFDESGRRFT---PPGGSHEAEANLPPDNEPSAAHATSPDGRKKKTAXXXXXTTSGIKAAPT------GAGR----GPTTQG----AACISAPGTAASSL--LTVTMERG-TAEEAPRAVWLGQVAAVMEARGDRDEAVRLYGEAAAELTGKREGAS-------------------RIGSRDGSGGTASPCPPAAGKGRSAQLGGGDRGVGAGAGPDLFPYSARAHYLASIIERTYRRHFLRRTAAQTLAAAAFRGHLARVGARKDKTHRSSAATFVARAWRRRMYRLGLATVKFQAIIRGAHGRRKAREIRILIRHTISA-QSVVRMFLAKRTTQRMRLEEASAGLLQALHRGFVLRRVRATAISEIHTSLWRAALGLNRVARGFLHRRFAGMVRQFAVDGEITRCEAEAAAVGGAVRLATTRADMYLTTDAGKVELAQEMRRAKAAVVRTKILMRGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALLGAL-GVGITNAELKVTSAAVDADGSGEISFSEFYAWFGGGGFHGGGDYGVGEALGFRGMTSDTS---ENWSLRSSPSLSTARSG----------------MEESTAALTSGYRSAEGNGGPRHTA----RATFVKARRNLRAATGMALQDRARRSVIRRWVSLAAREAQVRFREAWPPTLECWACHQAFALYGDYWRHFGGGRE-------------------------------EQHRRRGAERQWARLLDERSRLAAAGLRAEAAEEARIAPKGSAGAHEHAALGARLLAALSSDLKRGGGKSGSSEEEAVPTTEEATATVARLAFQ-AFDRDGNGELDVSDLADLLGVLRRIAGRPPSARTALGSGAAAAGYGLEAAMFAMDEDHSGQVDIDEFMRWFNGYDAHDGANRSTAPGELPQRGRESEEPLYVKVLGVRNGAT-GGTNAQEDREANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTADEDDTVGARASGDPKSAKNEKRPAAGGVFRVRAWLKRKAPATTNGSQRKQTKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPSVGGSNTGDGSFASPSSANRSVAETRARGAPFSPRRLLGDRWSSSTADPWKRHAKTLRAVAEQEARTLLLRRARLRAQVHELARFRATRPPEYDEWSSPDFLEKHRETVAEITADADSIFVENLHRNLREAEEAVQ---HGLSKERSVPSPLPPPDPGISAXXXXXXXXXXALHSDGSGNLATAIGVDGGSVGALASSPSRLAWSLGGRKWWGRRGGGRGTGTQVYAPG----TWGERQPTADIAETVKAAERDAAAARRRAFQTPTGRAEIARAVRRLKASRVIAATSNTVAAAAEAGGEAPQTNTAQGTHEERQTVVTQV----AAAGAVSEGATWGAPANAGLSEDAGAKHTASVAKLSTSLNVAGAVDR----VEEREKRSPLVGQAE--QLFQLFDADGSGAIDREELAPLLGQLGIWVTAKMASXXXXXXXXXXXXXXXXXXXVTWLENEGADLRRAPLS-KMLRAGQSVKAGGSSTRRLESQVRA------SIVARSRAAARAEVWASSGVTPVPAAA-------PAVVAT---------------TASTAAIDGPHEQAKQEDPNPQKQXXXXXXGEEEKKVIDEDAVAVEAATARKEPALAVKVTGGKERGRVLATRATGRRRRFEEEERDAERELVVKRAEDVAERRIKRQWRTQAGAAELKRERDRIRGAEEALNLTLRAWDAG---VSFAKEEAGVTKTDAS-ALRETKRAEEKLRHMFRLFDVSCDGCIHAEELGRLLSRMNVPMSEAEIVGLLHEMDRDGSGDVDFCEFSAWWHKDGLKRSNRPAALIRSAASSLVAKVAPITAARRDARRALISRARAEARAEVKNVLRLEDEDEEALRLAKIATGNTASAVAADAAGEYFVAFETRVGRECGGTSSAPPGKPLLKDGTEGLGGEGSGVGEGGEGRGDRLNAKRLAAARSSKLARAEAEAYADVQAMILTQAGKRELARRTRDLRLEWSAAIRTATSIARESGSGELGTAGSADYSYEGASHDKEEQRTQRKEQRQHA-TSTDTSGIPLVEAPILRFLWGLHRSTAAGVTLETAGASAG----VEPSELKYVGASLRSTLVGGANRRIWGSQVTLLGSTLAKGTAGRTANIVRTSADFGLPPQAEEEAT-LPNAARTAGVESGDALSLSTIFDDHAHDEIRDLKTLTRVDLADVLASLHRPS-----SSALANSAGSAAEGERRPRTKA---QIRADLATIAKLKLKMFFT-PGAFRKLAKQALLAEGRAFERHELARAIALEDGEPWRLAEAAETK---RGIESAGGATPADVDRLRAMTMGAAKLGRALALGE-------------------------AARS-----------------------------SGL-PLQRRIASAMNNLARDELRRAFALCEADGVPGEISRAEAAHVLSFAGIPQTTL 2661
BLAST of mRNA_F-serratus_M_contig111.1028.1 vs. uniprot
Match: A0A835ZFC5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFC5_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 2.040e-6 Identity = 172/646 (26.63%), Postives = 235/646 (36.38%), Query Frame = 1
Query: 1666 LFPYSARVHHLASMIEHAYERHFRRRTVAQIRVAAAFRGFLVRAGRRLDQRHKDRAAGVVRXXXXXXXXXXXXXXXXXXXXXXXXRGRRRREWLLLVKAR---VTAVQSRARVLLAKKKVRRMRLEKATATFLQ--------------------------ALQRGQAVRGARAAAIADIQAELWRAALGMNRVGRGFLHRRFAAMVR-QLAVDREIERSEAEAELVAGAKIVAIARVGVYLATAAGEMDLAREVRRAKAAAMSAKIRMRTASPAERRRRSALDTFDSFDIDGSGTIDVSELKPLLGALMDVHLTDAELEVASARVDADGKGDVSFSEFYDWYCSEFYGDGIGGXXXXXXXSESCCHQTGH---------------DNNCGISS----TIDVATRRNKRRRGRRGNARRSPSLELMDASAPVVREASSPYGKRLPRRNSFSAIRVAYAKARHGFREAVGLDIQERARRAVTRRWVSAVAREAQARFRKARPPSLECCACQHAFALYGDYWRHLGGGKSSAGGPA-------------DLACPRRPGRGRLFQDLKAALIAEGELPRKEAEEREWTRFLDERAFLEEANLRAEATEEARITQKDCAGTH-ELAELAARRFDVISSKVRSGQSEGLQVA 3414
LFPY+ R H A+ ++ A R +R+ A VAA RG LVR RR + R AG R XXXX + R TA+QS AR + +VR +R A A +Q AL RG R A Q++LWRAA + RG L RR+AA++R Q + + R + A + +R A A D A+ VR A AAA+ AK R+R +P R+ T + T+ + L GA + +D G G V E + G G + + + GH D C IS+ +I A + GR A R+ S D+ SS G +L A RV ARH EA G+ +ER R AV R A A+A FR ARPP C AC FALYGD+ H+ A A L C GRG + A + L +W R ERA AEA A++ +++ + E+ AARR + ++ S G + A
Sbjct: 118 LFPYAPRAHFAAAQLQRACRRRLQRKAAAATAVAAGLRGHLVRRKRR--RARAVREAGATRIQKLWASLDPPLTPLCVRHRXXXXXXXXXXXXXRYQRKRHVAATAIQSLARGARDRARVRWLRAAIAAAARVQRTWRGCLGRXXXXXXXXXXXXXXXXXALARGYGTRRAXXXXXXXXQSQLWRAAARVAVAWRGRLCRRYAALLRRQEHLRMKAPRLPTPMLTLKLATRASSSRATQLAAEARRARDEAQHVRGAIAAAL-AKQRLRFDTPEGRQEL----TTELERQTVRETLLKGAWEKLDGAAVAAARARFRARAVFDALDLSGGGRVGARELRELLRGGALLQGYVGIDAQLRAALAEPNADGHAAALDFEEFYALLSGDEGC-ISAQQWDSICAAPGGSSSGGGRSPCAPRTASAAAPDSGHCDHLHGSSSGGTKLD-----LAQRVL--SARHALAEATGIATRERTRAAVVCRATRTAADAARAGFRAARPPRFACLACGAPFALYGDFLTHMAAPAQHAAAAAATGVVCQHEGVKGGLRCRETGGRGCIAAPHALAARSLRLLSAAREAAAQWRRAAVERAXXXXXADAAEAGVHAQLREREASAVAGEVRSAAARRAAALRVELLSALESGGRTA 748
BLAST of mRNA_F-serratus_M_contig111.1028.1 vs. uniprot
Match: A0A067C2L8_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C2L8_SAPPC) HSP 1 Score: 62.8 bits (151), Expect = 1.290e-5 Identity = 53/153 (34.64%), Postives = 76/153 (49.67%), Query Frame = 1
Query: 2131 RAALGMNRVGRGFLHRRFAAMVRQLAVDREIERSEAEAELVAGAKIVAIARVGVYLATAAGEMDLAREVRRAKAAAMSAKIRMRTASPAERRRRSALDTFDSFDIDGSGTIDVSELKPLLGALMDVHLTDAELEVASARVDADGKGDVSFSEF 2589
RAA + R+ RGFL RR +R V E+ RS EA+ + + + ++L A G+ + + +R K A + K +PA RR + D F S+D+DGSGTIDV EL+ L L + + A L A +D G V SEF
Sbjct: 492 RAATNIQRLVRGFLSRRAVLRLRDRIVRDEVARSSREADYIQRFTAIRLEDFLLFLHQA-GQSHVHQLAQRLKDEATARKRARAHWAPAAMRRAALEDLFASYDVDGSGTIDVDELQHLFDELC-IPMDAASLAQAIRLMDTSRNGSVDMSEF 642
BLAST of mRNA_F-serratus_M_contig111.1028.1 vs. uniprot
Match: A0A7S2WEK7_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WEK7_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 6.170e-5 Identity = 40/111 (36.04%), Postives = 53/111 (47.75%), Query Frame = 1
Query: 2302 TAAGEMDLAREVRRAKAAAMSAKIRMRTASPAERRRRSALDTFDSFDIDGSGTIDVSELKPLLGALMDVHLTDAELEVASARVDADGKGDVSFSEFYDWYCSEFYGDGIGG 2634
T G +L E + A+ K + R S E + A +TFD FD DGSG ID+ E K L + V +T E VA +D+D G VS EF WY ++ GG
Sbjct: 1 TKEGMKELREETKLARQRRSEFKRQRRGLSKHEVIQSQANETFDMFDADGSGEIDIEEFKAALSEVC-VTMTHTEALVAMRGIDSDDSGSVSRDEFVAWYLAQKLNSASGG 110 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig111.1028.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig111.1028.1 >prot_F-serratus_M_contig111.1028.1 ID=prot_F-serratus_M_contig111.1028.1|Name=mRNA_F-serratus_M_contig111.1028.1|organism=Fucus serratus male|type=polypeptide|length=2627bp RDLLTAPAWISAPDLSPVDLSQTQTFPVDKKARPRKRRWRDDWRELIIVAback to top mRNA from alignment at F-serratus_M_contig111:8878..71111+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig111.1028.1 ID=mRNA_F-serratus_M_contig111.1028.1|Name=mRNA_F-serratus_M_contig111.1028.1|organism=Fucus serratus male|type=mRNA|length=62234bp|location=Sequence derived from alignment at F-serratus_M_contig111:8878..71111+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig111:8878..71111+ >mRNA_F-serratus_M_contig111.1028.1 ID=mRNA_F-serratus_M_contig111.1028.1|Name=mRNA_F-serratus_M_contig111.1028.1|organism=Fucus serratus male|type=CDS|length=15762bp|location=Sequence derived from alignment at F-serratus_M_contig111:8878..71111+ (Fucus serratus male)back to top |