mRNA_F-serratus_M_contig1106.998.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1106.998.1
Unique NamemRNA_F-serratus_M_contig1106.998.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig1106.998.1 vs. uniprot
Match: D8LRS8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS8_ECTSI)

HSP 1 Score: 534 bits (1376), Expect = 1.880e-181
Identity = 300/481 (62.37%), Postives = 348/481 (72.35%), Query Frame = 3 
Query:   30 MGNRRVVIFGIALAALLSVDAAAAASKGASR---KSNRRSVVEQGGRPSRTYRYRDEEGAQEHDG-----------------LKDGGKIGPK-RTKSNRGKDXXXXXXXXXXXXXXXXXXXXXPRGSRTRRTDGRGMEMVPSKRGSTKNSMLAGLATTMKGKATSLREDARGKMTEWKNIAKTTVWFSSKMEKFMIQMTWPDDGLLDDVWVKDTMKFLENTGNEPPRSPNNPNKRILRKLWLRMTEEDYRTKLKALQILHHASMDLSPEAHLRVRNQFMKMRDETNHKNRNEVYFESSRITHVSSSGIPFLPLLRSYSSYTFRRIIDVPGGPKQVASILRSKKTPQAEAVSVLRRLEKLICMGVGCKVDRKTLNTVTGQVLQLSARDLMILWRLYVKGLTKLMKGSYKEDKAASPEAVVQLLRHYNKTQEVLEKYLRHFKRVVRDRSMFEDNQVDPTALEEALEACLASVAPPGGTSATGE 1409
            MG+RR+ + G+A+  L +VD AAAASKGA R   +  R +   +  RPSR     DE   Q  DG                  +D G +G + R  S  G                          S T R   RGME+VPS+R   K+SML+GLA TMKGKA S++EDA+GK+TEW+NIAKTTVWFSSKMEKFMIQMTWPDDG LDD WVKDTM FLE+ GNEPPRSPNNPNKRILRKLWLRMTE DYRTKLKALQILHH +MDLS EA+ RVRNQFMKMRDETNHKNRNEVYFE +RI  V+SSG+PFLPLLRSYSS+T RR+ +V GGPKQ+AS LRSKKT Q EAV++LRRL+KLIC G+GCKVDRKTLNT+TGQV+QL+ARDLM LWRLYVKGLT+L+KG YKE +  +PEAVVQLL  Y KTQ+ LE+YL HFK++VRDR +FEDNQVDP AL+     CLASV    G  A  E
Sbjct:    1 MGHRRLALLGLAVVVLFAVDGAAAASKGAPRAGSQQRRSTKASRSSRPSRRDIDEDEREFQGWDGETKKGTRXXXXXXXXXAARDDGSVGRRVRPSSTPGSSRSSSRYQE----------------SGTSRRRSRGMELVPSRRSPPKSSMLSGLAATMKGKAASMQEDAKGKVTEWRNIAKTTVWFSSKMEKFMIQMTWPDDGALDDAWVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTEGDYRTKLKALQILHHTTMDLSSEANGRVRNQFMKMRDETNHKNRNEVYFEPARIMDVTSSGMPFLPLLRSYSSFTLRRMTEVQGGPKQIASTLRSKKTSQPEAVALLRRLDKLICTGMGCKVDRKTLNTITGQVMQLTARDLMTLWRLYVKGLTRLIKGGYKEGRTPAPEAVVQLLTQYGKTQQALERYLTHFKKIVRDRRLFEDNQVDPAALQ----VCLASVTQADGQGAEAE 461
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BLAST of mRNA_F-serratus_M_contig1106.998.1 vs. uniprot
Match: A0A835YKQ2_9STRA (ANTH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKQ2_9STRA)

HSP 1 Score: 203 bits (517), Expect = 2.810e-53
Identity = 136/392 (34.69%), Postives = 210/392 (53.57%), Query Frame = 3 
Query:  381 MVPSKRGS-----TKNSMLAGLATTMKGKATSLREDARGKMTEWKNIAKTTVWFSSKMEKFMIQMTWPDDGLLDDVWVKDTMKFLENTGNEPPR-SPNNPNKRILRKLWLRMTEEDYRTKL----------------KALQILHHASMDLSPEAHLRVRNQFMKMRDETNHKNRNEVYFESSRITHVSSSGIPFLPLLRSYSSYTFRRIIDVPGGPKQVASILRSKKTPQAEAVSVLRRLEKLICMGVGCK--------------------------------VDRKTLNT-VTGQVLQLSARDLMILWRLYVKGLTKLMKGSYK-EDKAASPEAVVQLLRHYNKTQEVLEKYLRHFKRV--VRDRSMFEDNQVDPTALEEALEACLASVAP 1382
            +VP++RG       K+S+L+GLA+++  KA+S++E ++GK  EW+ I K  V  SS+ E+FM+Q+TWPDD  +D V+  D M +L+   + P   +P NP +R LRKLW RM+E+D                     K+L ++HH  +DL P+A +R R   ++MR E N K  NE+YF+  RI  V++ G PF+P +++Y+SY F+R     GG K V+  L++KKT +  AV +L+ ++ ++  G+                                   VDRK L T +T   LQ +A D++ LWR+Y  G+ +L +G +       + +   +LL  Y  T+  +  YL   K++  VRD S FEDNQV   ALE+    CLA   P
Sbjct:   96 LVPARRGKGRGPPAKSSLLSGLASSVLEKASSMQEASKGKAMEWRKIVKGKV--SSQFERFMLQLTWPDDVPVDPVFTTDMMHYLDTADDYPDEMAPTNPYRRTLRKLWARMSEKDXXXXXXXXXXXXXXXXXXXXXKSLMLVHHMGIDLGPDASMRARTHILRMRKEVNSKKGNEMYFQLQRIMDVNAVGEPFVPFIKAYASYAFKRATMFVGGLKVVSQTLKAKKTQEGTAVELLQTIDAMLNQGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRKELVTDLTRAALQYTAGDMLELWRVYAAGVQRLAEGGFAGAGGKGAKDGKQRLLSGYASTRSAVSAYLDQCKKMKLVRDLSKFEDNQVSDAALEQ----CLAPAEP 481
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BLAST of mRNA_F-serratus_M_contig1106.998.1 vs. uniprot
Match: D7G759_ECTSI (Weakly similar Glutamic acid-rich protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G759_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 3.060e-10
Identity = 67/258 (25.97%), Postives = 116/258 (44.96%), Query Frame = 3 
Query:  426 GLATTMKGKATSLREDARGKMTEWKNIAKTTVWFSSKMEKFMIQMTWPDDGLLDDVWVKDTMKFLENTGNEPPRSPNNPNKRIL-RKLWLRMTEEDYRTKLKALQILHHASMDLSPEAHLRVRNQFMKMRDETNHKNRNEVYFESSRITHVSSSGIPFLPLLRSYSSYTFRRIIDVPGGPKQVASILRSKKTPQAEAVSVLRRLEKLICMGVGCKVDRKTLNTVTGQVLQLSARDLMILWRLYVKGLTKLMKGSYKED 1196
            G A    G+A SL      K+     +  +  W     E  ++++TWPDD   D+  V   +  ++    +   + N+   R+L RKLW +M+E D+RT  KA+ + H    DL  E H  ++    KM  E + K     YF+   +  VS  G  F   +  Y +Y F+R        +++ ++ R +       V+ L + +K I +GV C+   +    +T   L+ +A DL  LWR +   L  +++ +   D
Sbjct:  230 GTAAEAVGQAGSLAASTSQKLKREVKLVVSGSW-----ESALLKVTWPDDLPPDETLVLSMVDAVKTFKKDRDVTKNSAEHRVLLRKLWAKMSEPDWRTVSKAVYLFHSILRDLPVEHHAILKIFLAKMSREWDKKTACR-YFDLDVLCRVSEEGEAFRSFVDRYGTYVFKRAEGFNARFQELDTMQREEGWENV--VTTLAKAQKAIDLGVSCQPQPEEETELTVLCLRNTALDLHQLWRRFHSSLDWVLEEAEDGD 479
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BLAST of mRNA_F-serratus_M_contig1106.998.1 vs. uniprot
Match: A0A7S2V420_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V420_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 7.110e-9
Identity = 59/215 (27.44%), Postives = 103/215 (47.91%), Query Frame = 3 
Query:  522 WFSSKMEKFMIQMTWPDDGLLD----DVWVKDTMKFLENTGNEPPRSPNNPNKRILRKLWLRMTEEDYRTKLKALQILHHASMDLSPEAHLRVRNQFMKM-RDETNHKNRNEVYFESSRITHVSSSGIPFLPLLRSYSSYTFRRIIDVPGGPKQVASILRSKKTPQAEAVSVLRRLEKLICMGVGCKVDRKTLNTVTGQVLQLSARDLMILWRLY 1151
            +F+  +   + ++T PDD   D    +  V  T +F++N   E   S +NP + IL  +W R+ EED+RT +K L +LH    D++PE  L     F KM R+E +H     +YF    +  +++ G  +   +RSY  Y  +R         ++  +   +  P+    +VL+  + +  + + C   R+    V+   L+L A DL  LW L+
Sbjct:  249 YFARDINAAIYKVTRPDDYRPDLRTVESIVSQTQQFVQN---EDVTSNSNPFRLILTSIWERVMEEDWRTTIKGLALLHKLLRDVNPENALCFNKLFNKMSREECDHAG--HMYFSLPPVVRLNAEGQAWSRFMRSYFRYVRKRAKTFTSQFAELELLGFEEMHPEEIIFAVLKARKNVEAI-LACAFPREEYAEVSMWCLELLAEDLHHLWHLF 457
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BLAST of mRNA_F-serratus_M_contig1106.998.1 vs. uniprot
Match: A0A835ZEZ8_9STRA (ENTH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEZ8_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 9.480e-7
Identity = 64/256 (25.00%), Postives = 112/256 (43.75%), Query Frame = 3 
Query:  510 KTTVWFSSKMEKFMIQMTWPDDGLLDDVWVKDTMKFLENTGNEPPRSPNNPNKRI-LRKLWLRMTEEDYRTKLKALQILHHASMDLSPEAHLRVRNQFMKMRDETNHKNRNEV--------YFE-SSRITHVS---SSGIPFLPLLRSYSSYTFRRIIDVPGGPKQVASILRSKKTPQAEAVSVLRRLEKLICMGVGCKVDRKTLNTVTGQVLQLSARDLMILWRLYVKGLTKLMKGSYKED--KAASPEAVVQLL 1232
            K  ++ S   E  +++ TWPDD   D   V   +  + +   +   +  +   R+ LRKLW +M E D+RTK+K+  ILH    +L P     ++    K+R E + +    V        YF+ ++ +  V    +    F   +RSY +Y  RR     G  +++  +     +     +SVL +  K +   + C++     + VT   LQL   D   L+RL+   L   +  +   D    A P+AV ++L
Sbjct:  202 KVKMFTSGTWETALLKATWPDDAPPDAALVGQIVYGVRSFRPDMDVTKQSAEHRVFLRKLWAKMREPDWRTKVKSCYILHRVLRELPPRDDAVLKKHMGKLRRERSKRPAGAVGGGGDRPRYFDLAAAVAEVGPAPADARTFGGFVRSYVTYVLRRSQQFGGKFEELQGV--GPGSSYEHVISVLVKARKALEAAMACQISADQESEVTLLALQLVCMDAAKLFRLFHAALGWALTEAESGDLFAEADPQAVKEVL 455
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BLAST of mRNA_F-serratus_M_contig1106.998.1 vs. uniprot
Match: B7G2T5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G2T5_PHATC)

HSP 1 Score: 61.2 bits (147), Expect = 5.300e-6
Identity = 70/248 (28.23%), Postives = 112/248 (45.16%), Query Frame = 3 
Query:  528 SSKMEKFMIQMTWPDDGLLDDVWVKDTMKFLENTGNEPPRSPNNPNKRILRKLWLRMTEEDYRTKLKALQILHHASMDLSPEAHLRVRNQFMKMRDETNHKNRNEVYFESSRITHVSSS--GIPFLPLLRSYSSYTFRRIIDVPGGPKQVASI--LRSKKTPQAEAVSVLR--RLEK---LICMGVGCKVDRKTLNTVTGQVLQLSARDLMILWRLYVKGLTKLMKGSYKEDKAASPEAVVQLLRHYN 1244
            SS++E+ M++ T PDD     V  K   + +  T    PR   +    +LRKLW +M E+D+RT +K+L ILH  S D +PE    ++ +  ++R  T    R + YF S ++    S+   I F   +  Y+ Y   R     G   +++    L  KK P+A   + LR   LE    L+  GV C++        T    +  A DL+ L       L + +K S  + K   PE + +    Y+
Sbjct:  254 SSELEQVMLKATRPDD---TPVKGKHVERLVGVTYQISPRY--DIYDAVLRKLWGKMAEKDWRTTIKSLYILHRFSADGAPEHAAALKARLRELR-RTRDPKRKDKYFNSKQLLAGESNPENIKFRAFMSRYAHYVLLRAQCFGGLFDEISQEPKLDKKKPPKAITTTSLRSEHLEAAAMLLKAGVACQLKEDEACENTAIAAERVASDLIGLTTSVAIALNRALKSS--DLKGGDPELLKKWCEFYS 493
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BLAST of mRNA_F-serratus_M_contig1106.998.1 vs. uniprot
Match: A0A7S2EXR9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EXR9_TRICV)

HSP 1 Score: 57.4 bits (137), Expect = 6.590e-5
Identity = 62/252 (24.60%), Postives = 102/252 (40.48%), Query Frame = 3 
Query:  528 SSKMEKFMIQMTWPDDGLLDDVWVKDTMKFLENTGNEPPRSPNNPNKRILRKLWLRMTEEDYRTKLKALQILHHASMDLSPEAHLRVRNQFMKMRDETNHKNRNEVYFESSRIT--HVSSSGIPFLPLLRSYSSYTFRRIIDVPG--------GPKQVASILRSKKTPQAEAV---SVLRRLEKLICMGVGCKVDRKTLNTVTGQVLQLSARDLMILWRLYVKGLTKLMKGSYKEDKAASPEAVVQLLRHYN 1244
            SS++E+ M++ T PDD  +    V+  +                    +LRK+W +MTE+D+RTK+KAL +LH  S D +P+    ++ +  ++R  T    R E YF S ++     S   + +   +  Y+ Y   R     G         P    S  RS   P   A      L   + ++  G  C +        T   ++  A DL+ L      GL + +KG   E   A P  + +    Y+
Sbjct:  104 SSELEQVMLKATKPDDTPVKGKHVERLVGVTYQISGRYDIYD-----AVLRKVWAKMTEKDWRTKVKALYVLHRFSSDGAPDHQAALKARLRELR-RTRDPKRKEKYFNSKQLLAGDASPDNVKYRAFMARYAHYVLLRAQCFGGMFNEIGQEPPTSSKSSSRSSAKPITSAALRPEHLDAAQMILKAGTACALKDGEECENTCFCVERVASDLIGLTGAVASGLNRALKGKGAE--GADPAVIKRWCEFYS 347
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BLAST of mRNA_F-serratus_M_contig1106.998.1 vs. uniprot
Match: A0A7S1UKU7_9STRA (Hypothetical protein n=3 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UKU7_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 8.290e-5
Identity = 58/231 (25.11%), Postives = 99/231 (42.86%), Query Frame = 3 
Query:  528 SSKMEKFMIQMTWPDDGLLDDVWVKDTMKFLENTGNEPPRSPNNPNKRILRKLWLRMTEEDYRTKLKALQILHHASMDLSPEAHLRVRNQFMKMRDETNHKNRNEVYFESSRITHVSSS--GIPFLPLLRSYSSYTFRRIIDVPGGPKQVASILR----SKKTPQAEAVSVLRRLEKLI------CMGVGCKVDRKTLNTVTGQVLQLSARDLMILWRLYVKGLTKLMKGS 1184
            SS++E+ M++ T PDD     V  K   + +  T     R        +LRKLW +  E+D+RTK+KAL ILH  S D +PE    +  +  ++R  ++ K + + YF   ++  V ++     F   +  Y+ Y   R     G   ++    R    S   P     S   + E L+        G+ C++    +   T   ++  A DL+ L       L + +KG+
Sbjct:  228 SSELEQVMLKATRPDD---TPVKGKHVERLVGVTYQVSARYDLYTG--VLRKLWAKTAEKDWRTKVKALYILHRYSSDGAPEHKDALIKRLRELRRTSDPKRKGKKYFNKQQLLAVENTPENEAFRGFVGRYAHYVLARTQSFGGMFVEIGEAPRPPPKSSNRPPKPLTSTSLKQEHLVNAKMVLTAGLACQLKDDEVTENTAIAVERVASDLIALSSAVAMALNRALKGN 453
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1106.998.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LRS8_ECTSI1.880e-18162.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YKQ2_9STRA2.810e-5334.69ANTH domain-containing protein n=1 Tax=Tribonema m... [more]
D7G759_ECTSI3.060e-1025.97Weakly similar Glutamic acid-rich protein n=2 Tax=... [more]
A0A7S2V420_9STRA7.110e-927.44Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A835ZEZ8_9STRA9.480e-725.00ENTH domain-containing protein n=1 Tax=Tribonema m... [more]
B7G2T5_PHATC5.300e-628.23Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2EXR9_TRICV6.590e-524.60Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S1UKU7_9STRA8.290e-525.11Hypothetical protein n=3 Tax=Grammatophora oceanic... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1106contigF-serratus_M_contig1106:189412..194606 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score64.3
Seed ortholog evalue1.8e-07
Seed eggNOG ortholog2850.Phatr47192
Hectar predicted targeting categorysignal peptide
EggNOG OGs2ECB5@1,2SI7J@2759,2XBE3@2836
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-08_002290.1
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Exons11
Model size2158
Cds size1440
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928983.9216821-UTR-F-serratus_M_contig1106:189411..1894401622928983.9216821-UTR-F-serratus_M_contig1106:189411..189440Fucus serratus maleUTRF-serratus_M_contig1106 189412..189440 +
1690962655.8464286-UTR-F-serratus_M_contig1106:189411..1894401690962655.8464286-UTR-F-serratus_M_contig1106:189411..189440Fucus serratus maleUTRF-serratus_M_contig1106 189412..189440 +
1622928984.1202435-UTR-F-serratus_M_contig1106:193917..1946061622928984.1202435-UTR-F-serratus_M_contig1106:193917..194606Fucus serratus maleUTRF-serratus_M_contig1106 193918..194606 +
1690962656.0122294-UTR-F-serratus_M_contig1106:193917..1946061690962656.0122294-UTR-F-serratus_M_contig1106:193917..194606Fucus serratus maleUTRF-serratus_M_contig1106 193918..194606 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928983.9360995-CDS-F-serratus_M_contig1106:189440..1897451622928983.9360995-CDS-F-serratus_M_contig1106:189440..189745Fucus serratus maleCDSF-serratus_M_contig1106 189441..189745 +
1690962655.8672996-CDS-F-serratus_M_contig1106:189440..1897451690962655.8672996-CDS-F-serratus_M_contig1106:189440..189745Fucus serratus maleCDSF-serratus_M_contig1106 189441..189745 +
1622928983.9622896-CDS-F-serratus_M_contig1106:189994..1901451622928983.9622896-CDS-F-serratus_M_contig1106:189994..190145Fucus serratus maleCDSF-serratus_M_contig1106 189995..190145 +
1690962655.8792062-CDS-F-serratus_M_contig1106:189994..1901451690962655.8792062-CDS-F-serratus_M_contig1106:189994..190145Fucus serratus maleCDSF-serratus_M_contig1106 189995..190145 +
1622928983.9782567-CDS-F-serratus_M_contig1106:190643..1907601622928983.9782567-CDS-F-serratus_M_contig1106:190643..190760Fucus serratus maleCDSF-serratus_M_contig1106 190644..190760 +
1690962655.9049313-CDS-F-serratus_M_contig1106:190643..1907601690962655.9049313-CDS-F-serratus_M_contig1106:190643..190760Fucus serratus maleCDSF-serratus_M_contig1106 190644..190760 +
1622928983.9940705-CDS-F-serratus_M_contig1106:191040..1912221622928983.9940705-CDS-F-serratus_M_contig1106:191040..191222Fucus serratus maleCDSF-serratus_M_contig1106 191041..191222 +
1690962655.9139352-CDS-F-serratus_M_contig1106:191040..1912221690962655.9139352-CDS-F-serratus_M_contig1106:191040..191222Fucus serratus maleCDSF-serratus_M_contig1106 191041..191222 +
1622928984.0072472-CDS-F-serratus_M_contig1106:191427..1914971622928984.0072472-CDS-F-serratus_M_contig1106:191427..191497Fucus serratus maleCDSF-serratus_M_contig1106 191428..191497 +
1690962655.9261694-CDS-F-serratus_M_contig1106:191427..1914971690962655.9261694-CDS-F-serratus_M_contig1106:191427..191497Fucus serratus maleCDSF-serratus_M_contig1106 191428..191497 +
1622928984.0244567-CDS-F-serratus_M_contig1106:191841..1919551622928984.0244567-CDS-F-serratus_M_contig1106:191841..191955Fucus serratus maleCDSF-serratus_M_contig1106 191842..191955 +
1690962655.9500754-CDS-F-serratus_M_contig1106:191841..1919551690962655.9500754-CDS-F-serratus_M_contig1106:191841..191955Fucus serratus maleCDSF-serratus_M_contig1106 191842..191955 +
1622928984.050192-CDS-F-serratus_M_contig1106:192153..1922521622928984.050192-CDS-F-serratus_M_contig1106:192153..192252Fucus serratus maleCDSF-serratus_M_contig1106 192154..192252 +
1690962655.9584696-CDS-F-serratus_M_contig1106:192153..1922521690962655.9584696-CDS-F-serratus_M_contig1106:192153..192252Fucus serratus maleCDSF-serratus_M_contig1106 192154..192252 +
1622928984.0637548-CDS-F-serratus_M_contig1106:192477..1925671622928984.0637548-CDS-F-serratus_M_contig1106:192477..192567Fucus serratus maleCDSF-serratus_M_contig1106 192478..192567 +
1690962655.9668612-CDS-F-serratus_M_contig1106:192477..1925671690962655.9668612-CDS-F-serratus_M_contig1106:192477..192567Fucus serratus maleCDSF-serratus_M_contig1106 192478..192567 +
1622928984.079178-CDS-F-serratus_M_contig1106:192842..1929521622928984.079178-CDS-F-serratus_M_contig1106:192842..192952Fucus serratus maleCDSF-serratus_M_contig1106 192843..192952 +
1690962655.9818468-CDS-F-serratus_M_contig1106:192842..1929521690962655.9818468-CDS-F-serratus_M_contig1106:192842..192952Fucus serratus maleCDSF-serratus_M_contig1106 192843..192952 +
1622928984.0937734-CDS-F-serratus_M_contig1106:193387..1935441622928984.0937734-CDS-F-serratus_M_contig1106:193387..193544Fucus serratus maleCDSF-serratus_M_contig1106 193388..193544 +
1690962655.9923375-CDS-F-serratus_M_contig1106:193387..1935441690962655.9923375-CDS-F-serratus_M_contig1106:193387..193544Fucus serratus maleCDSF-serratus_M_contig1106 193388..193544 +
1622928984.1087708-CDS-F-serratus_M_contig1106:193872..1939171622928984.1087708-CDS-F-serratus_M_contig1106:193872..193917Fucus serratus maleCDSF-serratus_M_contig1106 193873..193917 +
1690962656.0022755-CDS-F-serratus_M_contig1106:193872..1939171690962656.0022755-CDS-F-serratus_M_contig1106:193872..193917Fucus serratus maleCDSF-serratus_M_contig1106 193873..193917 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1106.998.1prot_F-serratus_M_contig1106.998.1Fucus serratus malepolypeptideF-serratus_M_contig1106 189441..193917 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1106.998.1

>prot_F-serratus_M_contig1106.998.1 ID=prot_F-serratus_M_contig1106.998.1|Name=mRNA_F-serratus_M_contig1106.998.1|organism=Fucus serratus male|type=polypeptide|length=480bp
MGNRRVVIFGIALAALLSVDAAAAASKGASRKSNRRSVVEQGGRPSRTYR
YRDEEGAQEHDGLKDGGKIGPKRTKSNRGKDRSSSGSSRPSSRSSSSRSS
SRPRGSRTRRTDGRGMEMVPSKRGSTKNSMLAGLATTMKGKATSLREDAR
GKMTEWKNIAKTTVWFSSKMEKFMIQMTWPDDGLLDDVWVKDTMKFLENT
GNEPPRSPNNPNKRILRKLWLRMTEEDYRTKLKALQILHHASMDLSPEAH
LRVRNQFMKMRDETNHKNRNEVYFESSRITHVSSSGIPFLPLLRSYSSYT
FRRIIDVPGGPKQVASILRSKKTPQAEAVSVLRRLEKLICMGVGCKVDRK
TLNTVTGQVLQLSARDLMILWRLYVKGLTKLMKGSYKEDKAASPEAVVQL
LRHYNKTQEVLEKYLRHFKRVVRDRSMFEDNQVDPTALEEALEACLASVA
PPGGTSATGEEDSDEESGVREEGEEENEE*
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mRNA from alignment at F-serratus_M_contig1106:189412..194606+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1106.998.1 ID=mRNA_F-serratus_M_contig1106.998.1|Name=mRNA_F-serratus_M_contig1106.998.1|organism=Fucus serratus male|type=mRNA|length=5195bp|location=Sequence derived from alignment at F-serratus_M_contig1106:189412..194606+ (Fucus serratus male)
ATGGGCTAGGGCGAGGCCGTACACCCACCATGGGCAACCGTCGAGTAGTT
ATATTTGGCATTGCGTTGGCTGCACTATTGTCGGTAGATGCTGCTGCTGC
AGCATCGAAGGGCGCATCTCGGAAGAGCAACCGTCGTTCGGTTGTCGAGC
AAGGAGGCCGTCCCAGCCGCACCTATCGGTACAGGGATGAAGAAGGCGCT
CAAGAGCATGACGGCCTGAAGGACGGGGGGAAAATAGGACCCAAAAGAAC
GAAGAGTAATCGTGGGAAAGATCGGTCCAGCAGTGGGTCTTCGAGACCGT
CGTCTCGGTCGTCGTCCTCTCGATCGAGCTCCAGGTTGATTTTGGCGGTT
GTGTCTCTCTTTTGCGCAGTCATACAGAAAGATACCGGTACTCTACGCGA
CACATCCACATACTGGGAGCTACCATCATTCTGCACTCGCAGACGGCGAT
GAAATATCTCGCTAAGTTACACTGGTAGTCTTAACATTGTGAGATGACTT
CATCGTTTGTTATGTTACTGCTCAGGAATGCGATTGCTTGGTGCGCCGGA
ATACATTGACCTATACACGTGTTTGCCTCACAGGCCTCGCGGAAGCAGAA
CTCGACGGACCGATGGGCGGGGGATGGAGATGGTGCCCAGCAAGCGTGGC
TCCACCAAGAATAGTATGCTCGCAGGGTTGGCGACGACCATGAAGGGGAA
GGCCACATCACTTCGCGAGGACGCTCGGGGGAAGGTGGATCAACTGCTGG
TGTCTGCTTGCCGTTACTCGTTCGAATACCCTTCTTGAATATCTTTCTTG
ACTTGGTCATGTTCAATGTTCAGCTCACAACGGTGCGGACCGCGTGACTT
CAGCCTGCAATACCTTCAATCTGTAACTCGTTGACAGAACGATGTTTTTG
TAGCTCGTTTGCGCATAAGTAACAGGTCCAGGAAATTTACTGAGCGAGTT
ACCGCAAAATGACGAAATCAGGCTGCGTTCCCATCTGTCCAGAAACACTC
GGTCTTGGAAGCAGTGGAAAAACAGAATATAGCATGCTTTGTAGAAACAA
AAGTCGAACTCCTTTTTACTGGTGCACAAGCCGGTTCTCGCGACACGCTT
CTCGAGATTCCATGCGATGGCCACGTGTAAAACGGTTGGCCACTGGCCAG
CTCAAATATGGCGCATACTTTTGATGCCGGAGCGATGCAGAAAGTAAAGT
AGCTTCGATTATGCTCCCCATTTGCTTTGCAGATGACGGAGTGGAAGAAT
ATCGCCAAGACGACGGTGTGGTTCTCCAGCAAGATGGAGAAATTCATGAT
CCAGATGACGTGGCCCGACGACGGTCTGCTGGACGACGTCTGGGTCAAGG
TGTGTGTCTATGTGTTAGTGCGTGCCCGTGCCGGACGCGCCATGTACTGC
ACTTCTCTACTCTAGGGCGCTCGAAAGGACTCAGCAATGGTGGGGTTCAG
CTGACACTCGGAATTTCCCGGCGAATATCACGTTTTCCCTTGGAATAGGA
TAGCATAACTCACGGTTCCACACCACGGGTGAAGATATTCCGCTCAATGT
GACAGACTGTTTTTATTCCCGCTGCCCTTTCCGTCGATTATCGCTGCGTC
AAAAAATGCCGGTGGCGACGAACGAACAGGACACGATGAAATTCTTAGAG
AACACCGGTAATGAGCCCCCTCGATCGCCGAATAATCCCAACAAACGCAT
TCTGCGGAAGCTGTGGTTGCGGATGACGGAAGAGGACTACCGCACAAAGC
TGAAGGCTCTCCAAATTCTACACCATGCCAGCATGGATCTCAGTCCTGAA
GCCCACTTGAGGTGAGACGTGTTTCTCGTTTGTCGTCTTTTCTGGTATCA
AAGGCATGCCTGATGGCTATATTTATCGTTTGCGCGGGCGGAATGTTGTC
TCGGCACTATCTTCGGCCATAGCTTGCCACAACTTTCCAGCACGTCCGCC
CGACTTCCTTATTTATCACTGGTTTTCCCGCCCCGCACGGTGTTGTACGT
TGTCTGCTCTGACAAGGGTACGGAATCAGTTCATGAAGATGAGAGACGAA
ACCAATCACAAGAATCGTAACGAGGTGTATTTTGAGGTATGAAGCAAAGG
TACACCGTTGGAGTAGCAGCGTGCTTTCGATATATAATGGGGCCGTTTGT
ATCGTCCTCATCCATAATTAATTGACGGAATACCGTACCGGGATCGTGGG
CAAGTTATTGGAGCATACGACCCGGATGTATATTGCTCTGGATCACCCGG
ATGTATATTGCTCTGGATCACCCGGATGTATATTGCTCTGGATCACCCGG
ATGTATATTGCTCTGGATCACCCAAATGTCCACGCCGCGTATTGACATTC
TAAAGCTCGAAATTACAGCATCTCTGACATGGTTTCGTCTCCACTTCTCC
TTCCCCTTTTCACTCGGCATCGTACGCAAGTCATCACGCATCACGCACGT
AAGCAGTTCAGGCATCCCGTTCCTACCGCTGCTGCGGTCGTACTCGTCCT
ACACGTTTAGGAGGATAATTGATGTGCCAGGGGGACCGAAACAGGTATAT
AACTGTTTTTTTTGTCCGCCCCGTTGGATCCGTTCACTGCATTCACCGTT
TGCAGTCCAACCTTGAAATACTTTATGCTCGCGGTTTTTACAGTGGTATA
TCCAACTCAAGTCTTGTTGGCGGTGTCGCCTTGAGGTACCTACTGTTGAG
ATAACAAAGCAAACGCTTTTTGAACAACTTTTTAATGCCAAGGTGGCTTC
CATCCTGCGCAGCAAGAAGACGCCCCAGGCGGAGGCGGTGAGCGTTCTCC
GCCGCCTGGAGAAGCTGATATGCATGGGCGTTGGGTGTAAGGTGAGGGTG
ACTGCCCGTGTTCATACTCTGCTGCTGCACCTGCATTTTACGGGAAGGAC
TCACCGGTACTCGTTCGGAGGGCGTCAACGTTCCTACTACATGACATTAT
ATTCCTAAGTTTACAAGACATTGCACTCCTAAGTTCTTACTGATGCGTGC
AATTGTTCTCAATTGAAGCGAAATACGCAAGATCCGCTTGTTCTGAGCGC
AGTTTTCCTTTTATAGGTGGACCGCAAGACCCTCAACACTGTTACGGGCC
AGGTTCTGCAGCTTTCAGCACGAGACTTGATGATCTTGTGGCGGTTATAC
GTGAAGGTATGGAAAATTTCCGTATCAAGCTGGTGCATTGCTGTTTCGAC
GACAAATGCCACATGTATGCATGCGCGTGTTAGATGCGTTGGTGATGTTA
TGTTTCTCGGTCGCTTCAAGCTACACGACATAATCACTGGGATGGATGGC
ATCTTGTCGGATGATTTTCGACCTAGCGTCACTTGAAGATAACTTTTTCT
GGCTTTATGTGATATCCAACATTTGACTTCTGAATGGAAACTCATTGGTT
GACAGCCTCGTTTACTCGGTGGGGAATGCAGGGGCTCACGAAGCTCATGA
AGGGGAGTTACAAGGAAGACAAGGCGGCATCACCGGAGGCTGTCGTGCAG
CTCCTTCGTCATTACAATAAGACCCAGGAAGTGCTGGAGAAGTAAGTACT
TCTACGAGGTATTCGTGCCGGACCAATGTCATTCACCGCGTGACTTCTTT
TAAGGCATCCGGGGGCGATACTTACTTGAGACAAGCGGCCGAGAATCTAA
TGAGCGGCTGACCCTATCCTATTAATACTAACATTGGGGATGTTGAACAT
AACCCTTTTAATCCCACGAAGAGTTTTTGTCCCTACAGGCAATGTTCCCA
TTTATACGATTTGAACTATAAATATCCCTCTATTGGGTGGATGCTATTAA
CAGGAAGGTTTAGATGTGTTTAGATTTTTCTTCAAAAACAATATTTGTTT
CGGACGTTGTATTCGATGTGAAATGGGCGGAATTACATGGAAGTGCACGG
TCTAGGTTGCAACAGCGTAATGTTCAATCCTCATGCATCACTGTGTAACC
ACATCGCGACCCATGGTTAACCACAGGTACCTGAGGCACTTCAAGAGGGT
CGTACGTGACCGGAGCATGTTTGAAGACAACCAGGTGGACCCGACCGCAT
TAGAAGAAGCGTTAGAAGCTTGCTTGGCATCTGTCGCCCCACCGGGAGGC
ACTTCGGCAACGGGAGAAGAGGACTCTGATGAAGTGGGTGTGTAGATCTT
AACCCAGGTTGTTTTTGTAATGTAGATTCCTTACTCTCCAGACCGTACGA
TCTTGCCAGGCGCTCGCGTGCCTTACGGCGGTTGGTTATACTCGTCGTAG
TTTTTTTTTGTAAGCGGTGGCGAAAGCACGATGGGACTCTCGCAAGGGGC
GATACAAATCCCGCTTTACGGCAGAACGAAATCATCGTGAACAGGAACCC
GGAAGCGTGTGTAGGCATTTCTTCACAGCACAGCTGCCTTGGCTGATCTT
GTCAAAATGTTGCCTTTATTTATCACACGCGATTGCTTTGCGCATGTCTT
GATGCGTACAGGAGAGTGGTGTTAGGGAGGAAGGGGAGGAAGAAAATGAG
GAGTGAGGCTTGCGAACGGGAGTGCCAACTGCTGATAGCGTGGCGAAACA
TTTCAGAACAAGATGGAAGACCAAGCCAATGTTTGTGATGGCATGTCTAG
ATGGAGGCGCAAAATCATTTGTTCAACCTTATGGAACTATGGACCGTAAA
CCGCAACCTGAGTTACACGTCAGCATCTGAATGACTGCGTTTCACGATGT
GCTGTAGCCCATTGCACCAATAGCCCCCAAAATATCCCCGAGGACCTACG
TAATACGCTCACACAAACTTGTAAAGTACCACAGGTTACTCTGCCAGAGG
TGACGAACATACAGATAGCCTGACCTGCAACTGGGTGTGTAACAGAAATA
TCAACCTCATAACGGGGACAACGGGAGCGGAGTTTTTTTTTAGCTCCGAA
CTGTGACCCATGTCTTACATACCATACCGCTTGGTGGAAGGACTACATAA
CACTCGCACGTTCACCCAGACAAATATTTCTTGTTCTAGTCTTACACTGT
ATGGACGTACAAATACATAACTGAATTGCATTTGGTACGGTTGGGAGATT
CTGTGTTATTCGTACAAGGTATTTTTCAGATTGCACACTGCTTCCTAGTT
GTTGTGAAAAATGTTGCGATATGAATATTCGGTTTTTGCCTCTCTCTGCG
CACATGACGTGGGAAAAACCGCGACTTCCCTCTGATATCGAATGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1106:189412..194606+

>mRNA_F-serratus_M_contig1106.998.1 ID=mRNA_F-serratus_M_contig1106.998.1|Name=mRNA_F-serratus_M_contig1106.998.1|organism=Fucus serratus male|type=CDS|length=2880bp|location=Sequence derived from alignment at F-serratus_M_contig1106:189412..194606+ (Fucus serratus male)
ATGGGCAACCGTCGAGTAGTTATATTTGGCATTGCGTTGGCTGCACTATT
GTCGGTAGATGCTGCTGCTGCAGCATCGAAGGGCGCATCTCGGAAGAGCA
ACCGTCGTTCGGTTGTCGAGCAAGGAGGCCGTCCCAGCCGCACCTATCGG
TACAGGGATGAAGAAGGCGCTCAAGAGCATGACGGCCTGAAGGACGGGGG
GAAAATAGGACCCAAAAGAACGAAGAGTAATCGTGGGAAAGATCGGTCCA
GCAGTGGGTCTTCGAGACCGTCGTCTCGGTCGTCGTCCTCTCGATCGAGC
TCCAGATGGGCAACCGTCGAGTAGTTATATTTGGCATTGCGTTGGCTGCA
CTATTGTCGGTAGATGCTGCTGCTGCAGCATCGAAGGGCGCATCTCGGAA
GAGCAACCGTCGTTCGGTTGTCGAGCAAGGAGGCCGTCCCAGCCGCACCT
ATCGGTACAGGGATGAAGAAGGCGCTCAAGAGCATGACGGCCTGAAGGAC
GGGGGGAAAATAGGACCCAAAAGAACGAAGAGTAATCGTGGGAAAGATCG
GTCCAGCAGTGGGTCTTCGAGACCGTCGTCTCGGTCGTCGTCCTCTCGAT
CGAGCTCCAGGCCTCGCGGAAGCAGAACTCGACGGACCGATGGGCGGGGG
ATGGAGATGGTGCCCAGCAAGCGTGGCTCCACCAAGAATAGTATGCTCGC
AGGGTTGGCGACGACCATGAAGGGGAAGGCCACATCACTTCGCGAGGACG
CTCGGGGGAAGGCCTCGCGGAAGCAGAACTCGACGGACCGATGGGCGGGG
GATGGAGATGGTGCCCAGCAAGCGTGGCTCCACCAAGAATAGTATGCTCG
CAGGGTTGGCGACGACCATGAAGGGGAAGGCCACATCACTTCGCGAGGAC
GCTCGGGGGAAGATGACGGAGTGGAAGAATATCGCCAAGACGACGGTGTG
GTTCTCCAGCAAGATGGAGAAATTCATGATCCAGATGACGTGGCCCGACG
ACGGTCTGCTGGACGACGTCTGGGTCAAGATGACGGAGTGGAAGAATATC
GCCAAGACGACGGTGTGGTTCTCCAGCAAGATGGAGAAATTCATGATCCA
GATGACGTGGCCCGACGACGGTCTGCTGGACGACGTCTGGGTCAAGGACA
CGATGAAATTCTTAGAGAACACCGGTAATGAGCCCCCTCGATCGCCGAAT
AATCCCAACAAACGCATTCTGCGGAAGCTGTGGTTGCGGATGACGGAAGA
GGACTACCGCACAAAGCTGAAGGCTCTCCAAATTCTACACCATGCCAGCA
TGGATCTCAGTCCTGAAGCCCACTTGAGGACACGATGAAATTCTTAGAGA
ACACCGGTAATGAGCCCCCTCGATCGCCGAATAATCCCAACAAACGCATT
CTGCGGAAGCTGTGGTTGCGGATGACGGAAGAGGACTACCGCACAAAGCT
GAAGGCTCTCCAAATTCTACACCATGCCAGCATGGATCTCAGTCCTGAAG
CCCACTTGAGGGTACGGAATCAGTTCATGAAGATGAGAGACGAAACCAAT
CACAAGAATCGTAACGAGGTGTATTTTGAGGGTACGGAATCAGTTCATGA
AGATGAGAGACGAAACCAATCACAAGAATCGTAACGAGGTGTATTTTGAG
TCATCACGCATCACGCACGTAAGCAGTTCAGGCATCCCGTTCCTACCGCT
GCTGCGGTCGTACTCGTCCTACACGTTTAGGAGGATAATTGATGTGCCAG
GGGGACCGAAACAGTCATCACGCATCACGCACGTAAGCAGTTCAGGCATC
CCGTTCCTACCGCTGCTGCGGTCGTACTCGTCCTACACGTTTAGGAGGAT
AATTGATGTGCCAGGGGGACCGAAACAGGTGGCTTCCATCCTGCGCAGCA
AGAAGACGCCCCAGGCGGAGGCGGTGAGCGTTCTCCGCCGCCTGGAGAAG
CTGATATGCATGGGCGTTGGGTGTAAGGTGGCTTCCATCCTGCGCAGCAA
GAAGACGCCCCAGGCGGAGGCGGTGAGCGTTCTCCGCCGCCTGGAGAAGC
TGATATGCATGGGCGTTGGGTGTAAGGTGGACCGCAAGACCCTCAACACT
GTTACGGGCCAGGTTCTGCAGCTTTCAGCACGAGACTTGATGATCTTGTG
GCGGTTATACGTGAAGGTGGACCGCAAGACCCTCAACACTGTTACGGGCC
AGGTTCTGCAGCTTTCAGCACGAGACTTGATGATCTTGTGGCGGTTATAC
GTGAAGGGGCTCACGAAGCTCATGAAGGGGAGTTACAAGGAAGACAAGGC
GGCATCACCGGAGGCTGTCGTGCAGCTCCTTCGTCATTACAATAAGACCC
AGGAAGTGCTGGAGAAGGGCTCACGAAGCTCATGAAGGGGAGTTACAAGG
AAGACAAGGCGGCATCACCGGAGGCTGTCGTGCAGCTCCTTCGTCATTAC
AATAAGACCCAGGAAGTGCTGGAGAAGTACCTGAGGCACTTCAAGAGGGT
CGTACGTGACCGGAGCATGTTTGAAGACAACCAGGTGGACCCGACCGCAT
TAGAAGAAGCGTTAGAAGCTTGCTTGGCATCTGTCGCCCCACCGGGAGGC
ACTTCGGCAACGGGAGAAGAGGACTCTGATGAAGTACCTGAGGCACTTCA
AGAGGGTCGTACGTGACCGGAGCATGTTTGAAGACAACCAGGTGGACCCG
ACCGCATTAGAAGAAGCGTTAGAAGCTTGCTTGGCATCTGTCGCCCCACC
GGGAGGCACTTCGGCAACGGGAGAAGAGGACTCTGATGAAGAGAGTGGTG
TTAGGGAGGAAGGGGAGGAAGAAAATGAGGAGTGAGAGAGTGGTGTTAGG
GAGGAAGGGGAGGAAGAAAATGAGGAGTGA
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