mRNA_F-serratus_M_contig110.960.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig110.960.1 vs. uniprot
Match: D8LLB2_ECTSI (HSF_DOMAIN domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLB2_ECTSI) HSP 1 Score: 209 bits (531), Expect = 2.010e-62 Identity = 92/110 (83.64%), Postives = 103/110 (93.64%), Query Frame = 3
Query: 507 DYGFPPARGGRGAPSMFPRKLYQILCETDPAVVGWDNDGESFHIADMEQFVESVMPLYYRHNKLTSFQRQLNLYGFKKRGRDEKHAGHYYHPFFQRDHPEILGDVRRSYP 836
DYGFPPARGGRGAPSMFPRKLYQILCETDP ++ WD+DG+SFHIA+ E+++E VMPL+YRHNKLTSFQRQLNLYGFKKRGRDEK+ GHYYHP+FQRD PEILG VRRSYP
Sbjct: 2 DYGFPPARGGRGAPSMFPRKLYQILCETDPEIITWDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYGFKKRGRDEKNPGHYYHPYFQRDRPEILGGVRRSYP 111
BLAST of mRNA_F-serratus_M_contig110.960.1 vs. uniprot
Match: A0A6H5JRR2_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRR2_9PHAE) HSP 1 Score: 209 bits (533), Expect = 4.270e-56 Identity = 92/110 (83.64%), Postives = 103/110 (93.64%), Query Frame = 3
Query: 507 DYGFPPARGGRGAPSMFPRKLYQILCETDPAVVGWDNDGESFHIADMEQFVESVMPLYYRHNKLTSFQRQLNLYGFKKRGRDEKHAGHYYHPFFQRDHPEILGDVRRSYP 836
DYGFPPARGGRGAPSMFPRKLYQILCETDP ++ WD+DG+SFHIA+ E+++E VMPL+YRHNKLTSFQRQLNLYGFKKRGRDEK+ GHYYHP+FQRD PEILG VRRSYP
Sbjct: 11 DYGFPPARGGRGAPSMFPRKLYQILCETDPEIISWDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYGFKKRGRDEKNPGHYYHPYFQRDRPEILGGVRRSYP 120
BLAST of mRNA_F-serratus_M_contig110.960.1 vs. uniprot
Match: A0A7R9YBQ9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBQ9_9STRA) HSP 1 Score: 122 bits (305), Expect = 1.330e-26 Identity = 58/108 (53.70%), Postives = 75/108 (69.44%), Query Frame = 3
Query: 507 DYGFPPARGGRGAPSMFPRKLYQILCETDPAVVGWDNDGESFHIADMEQFVESVMPLYYRHNKLTSFQRQLNLYGFKKRGRDEKHAGHYYHPFFQRDHPEILGDVRRS 830
DY P G RGAP +FPRKL+++L + D AV+ WD +GE F I DM+ F + Y++H+K TSFQRQLNLYGF+K + E+ G+Y HP FQRDHPE L VRR+
Sbjct: 44 DYKRYPRTGKRGAPQVFPRKLFELLEKEDSAVIRWDEEGECFVIQDMDTFTRESLERYFKHHKFTSFQRQLNLYGFRKIAKGER-CGYYVHPHFQRDHPEWLSKVRRT 150
BLAST of mRNA_F-serratus_M_contig110.960.1 vs. uniprot
Match: A0A7S2BSE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSE7_9STRA) HSP 1 Score: 105 bits (262), Expect = 2.120e-23 Identity = 54/104 (51.92%), Postives = 69/104 (66.35%), Query Frame = 3
Query: 522 PARGGRGAPSMFPRKLYQILCETDPAVVGWDNDGESFHIADMEQFVESVMPLYYRHNKLTSFQRQLNLYGFKK--RGRDEKHAGHYYHPFFQRDHPEILGDVRR 827
P G RGAP +FPRKLY+IL ++GW + G+SF I +ME FV +++ Y+RH K +SFQRQLNLYGF+K +G D G Y H F RD PE+L VRR
Sbjct: 4 PRTGRRGAPQVFPRKLYEILSTEREDIIGWTDSGKSFIIKEMETFVTNILMKYFRHQKYSSFQRQLNLYGFRKVQKGTD---VGSYAHECFIRDQPELLTKVRR 104
BLAST of mRNA_F-serratus_M_contig110.960.1 vs. uniprot
Match: A0A7S2G7U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7U9_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.200e-21 Identity = 55/104 (52.88%), Postives = 67/104 (64.42%), Query Frame = 3
Query: 522 PARGGRGAPSMFPRKLYQILCETDPAVVGWDNDGESFHIADMEQFVESVMPLYYRHNKLTSFQRQLNLYGFKK--RGRDEKHAGHYYHPFFQRDHPEILGDVRR 827
P G RGAP +FPRKLY+IL V+GW + G+SF I +ME FV ++ Y+RH K +SFQRQLNLYGF+K +G D G Y H F RD PE L VRR
Sbjct: 96 PRTGRRGAPQVFPRKLYEILTNERSDVIGWTSSGKSFIILEMEIFVNEILMNYFRHQKYSSFQRQLNLYGFRKIQKGPD---TGAYAHEHFLRDQPESLTFVRR 196
BLAST of mRNA_F-serratus_M_contig110.960.1 vs. uniprot
Match: A0A835Z6Z9_9STRA (HSF-type DNA-binding-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Z9_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 3.000e-21 Identity = 53/101 (52.48%), Postives = 66/101 (65.35%), Query Frame = 3
Query: 531 GGRGAPSMFPRKLYQILCETDPAVVGWDNDGESFHIADMEQFVESVMPLYYRHNKLTSFQRQLNLYGFKK--RGRDEKHAGHYYHPFFQRDHPEILGDVRR 827
G RGAP FPR+LY++L E D +VV W +GE F I DM+ FV + + Y++HNK TSFQRQ NLYGF+K RG D AG Y H F++ E L VRR
Sbjct: 1 GKRGAPQAFPRRLYELLQEEDASVVSWIKNGEGFIINDMDTFVNTTLVKYFQHNKYTSFQRQCNLYGFRKITRGPD---AGMYIHEHFKKGRLEDLVKVRR 98
BLAST of mRNA_F-serratus_M_contig110.960.1 vs. uniprot
Match: A0A7S2R5C8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5C8_9STRA) HSP 1 Score: 106 bits (265), Expect = 3.300e-21 Identity = 62/127 (48.82%), Postives = 79/127 (62.20%), Query Frame = 3
Query: 522 PARGGRGAPSMFPRKLYQILCETDPAVVGWDNDGESFHIADMEQFVESVMPLYYRHNKLTSFQRQLNLYGFKKRGRDEKHAGHYYHPFFQRDHPEILGDVRRSYPTGSGNSKSEDDEAGSSTTSSTP 902
P G RGAP +FPRKLY+IL + W G SF I DME FV SV+ Y+RH K +SFQRQLNLYGF+K + + G Y H FF RD + L VRR+ P +G SK++ +EA S ++S P
Sbjct: 66 PRTGKRGAPQVFPRKLYEILDNESEDTISWTESGHSFVIKDMETFVTSVLMKYFRHQKFSSFQRQLNLYGFRKISKGTE-TGAYCHEFFARDQTDKLRLVRRT-PQVTGRSKAKTEEATSESSSVEP 190
BLAST of mRNA_F-serratus_M_contig110.960.1 vs. uniprot
Match: A0A7S2R0W2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0W2_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 2.460e-19 Identity = 47/105 (44.76%), Postives = 69/105 (65.71%), Query Frame = 3
Query: 522 PARGGRGAPSMFPRKLYQILCETDPAVVGWDNDGESFHIADMEQFVESVMPLYYRHNKLTSFQRQLNLYGFKK--RGRDEKHAGHYYHPFFQRDHPEILGDVRRS 830
P G G + FPRKL ++L + DPA+V W G++F + D ++F+ ++P Y+RH KLTSFQRQLNLYGF++ +G D G Y H +F R+ PE+ ++RS
Sbjct: 22 PGTGPTGHSNPFPRKLMEMLRKEDPAIVCWLPRGDAFTVRDADKFINDILPRYFRHTKLTSFQRQLNLYGFRRITKGPD---VGAYRHEWFNREKPELCIQMKRS 123
BLAST of mRNA_F-serratus_M_contig110.960.1 vs. uniprot
Match: A0A7S3H846_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H846_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 2.700e-19 Identity = 46/110 (41.82%), Postives = 66/110 (60.00%), Query Frame = 3
Query: 537 RGAPSMFPRKLYQILCETDPAVVGWDNDGESFHIADMEQFVESVMPLYYRHNKLTSFQRQLNLYGFKKRGRDEKHAGHYYHPFFQRDHPEILGDVRRSYPTGSGNSKSED 866
R + FP KL+ ++ D +VGW G SF + DM++FV ++P +++HN TSFQRQLNLYGF++ +K G YYHP FQ+ E+ +RR GS S +D
Sbjct: 29 RNYSNTFPVKLFDLVSSEDEGIVGWQGHGTSFQVRDMDKFVNLILPKHFKHNNFTSFQRQLNLYGFRRSASYDK--GAYYHPQFQQGQRELAESIRRVLAPGSEGSGGKD 136
BLAST of mRNA_F-serratus_M_contig110.960.1 vs. uniprot
Match: A0A6H5KMN3_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN3_9PHAE) HSP 1 Score: 100 bits (249), Expect = 7.760e-19 Identity = 51/102 (50.00%), Postives = 67/102 (65.69%), Query Frame = 3
Query: 531 GGRGAPSMFPRKLYQILCETDPAVVGWDNDGESFHIADMEQFVESVMPLYYRHNKLTSFQRQLNLYGFKK--RGRDEKHAGHYYHPFFQRDHPEILGDVRRS 830
G RGAP F RKL +IL A + W+ +G +F + D+E+F E ++ YYRH+K +SFQRQLNLY F+K +G D AG Y HP F+RD P+ L VRRS
Sbjct: 35 GKRGAPQAFARKLAEILATESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGAD---AGGYAHPMFRRDRPDDLYHVRRS 133 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig110.960.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig110.960.1 >prot_F-serratus_M_contig110.960.1 ID=prot_F-serratus_M_contig110.960.1|Name=mRNA_F-serratus_M_contig110.960.1|organism=Fucus serratus male|type=polypeptide|length=317bp MARRPEETDYGFPPARGGRGAPSMFPRKLYQILCETDPAVVGWDNDGESFback to top mRNA from alignment at F-serratus_M_contig110:739789..746380- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig110.960.1 ID=mRNA_F-serratus_M_contig110.960.1|Name=mRNA_F-serratus_M_contig110.960.1|organism=Fucus serratus male|type=mRNA|length=6592bp|location=Sequence derived from alignment at F-serratus_M_contig110:739789..746380- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig110:739789..746380- >mRNA_F-serratus_M_contig110.960.1 ID=mRNA_F-serratus_M_contig110.960.1|Name=mRNA_F-serratus_M_contig110.960.1|organism=Fucus serratus male|type=CDS|length=1902bp|location=Sequence derived from alignment at F-serratus_M_contig110:739789..746380- (Fucus serratus male)back to top |